Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428240 | XP_003602734.1 | 95.556 | 495 | 10 | 1 | 1 | 495 | 1 | 483 | 0.0 | 980 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428240 | sp|Q9FI43|MAPC2_ARATH | 69.325 | 489 | 131 | 4 | 9 | 495 | 16 | 487 | 0.0 | 701 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428240 | G7J2S0 | 95.556 | 495 | 10 | 1 | 1 | 495 | 1 | 483 | 0.0 | 980 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa0428240 | 0.812056 | 5.137559e-51 | -8.615850e-47 |
| Msa0004060 | Msa0428240 | 0.800441 | 1.438968e-48 | -8.615850e-47 |
| Msa0007970 | Msa0428240 | 0.808382 | 3.184108e-50 | -8.615850e-47 |
| Msa0014570 | Msa0428240 | 0.806662 | 7.378350e-50 | -8.615850e-47 |
| Msa0022750 | Msa0428240 | -0.803655 | 3.142186e-49 | -8.615850e-47 |
| Msa0031820 | Msa0428240 | 0.824002 | 1.021857e-53 | -8.615850e-47 |
| Msa0032320 | Msa0428240 | 0.800468 | 1.421224e-48 | -8.615850e-47 |
| Msa0037160 | Msa0428240 | 0.811942 | 5.438237e-51 | -8.615850e-47 |
| Msa0039250 | Msa0428240 | 0.809020 | 2.326265e-50 | -8.615850e-47 |
| Msa0041720 | Msa0428240 | 0.801715 | 7.900527e-49 | -8.615850e-47 |
| Msa0046760 | Msa0428240 | 0.834715 | 2.553371e-56 | -8.615850e-47 |
| Msa0052610 | Msa0428240 | 0.806725 | 7.155829e-50 | -8.615850e-47 |
| Msa0064290 | Msa0428240 | 0.808915 | 2.449316e-50 | -8.615850e-47 |
| Msa0081360 | Msa0428240 | 0.800896 | 1.162491e-48 | -8.615850e-47 |
| Msa0081650 | Msa0428240 | 0.803133 | 4.032030e-49 | -8.615850e-47 |
| Msa0101880 | Msa0428240 | 0.818842 | 1.587169e-52 | -8.615850e-47 |
| Msa0103250 | Msa0428240 | 0.802633 | 5.115072e-49 | -8.615850e-47 |
| Msa0108390 | Msa0428240 | 0.802041 | 6.771973e-49 | -8.615850e-47 |
| Msa0127850 | Msa0428240 | 0.804094 | 2.547836e-49 | -8.615850e-47 |
| Msa0130240 | Msa0428240 | 0.808622 | 2.828745e-50 | -8.615850e-47 |
| Msa0131330 | Msa0428240 | 0.818913 | 1.529139e-52 | -8.615850e-47 |
| Msa0135420 | Msa0428240 | 0.806221 | 9.138265e-50 | -8.615850e-47 |
| Msa0136070 | Msa0428240 | 0.802657 | 5.055289e-49 | -8.615850e-47 |
| Msa0136100 | Msa0428240 | 0.808298 | 3.317745e-50 | -8.615850e-47 |
| Msa0146280 | Msa0428240 | 0.803363 | 3.613826e-49 | -8.615850e-47 |
| Msa0154440 | Msa0428240 | 0.809396 | 1.931783e-50 | -8.615850e-47 |
| Msa0171850 | Msa0428240 | 0.809494 | 1.840235e-50 | -8.615850e-47 |
| Msa0177210 | Msa0428240 | 0.808621 | 2.829949e-50 | -8.615850e-47 |
| Msa0181230 | Msa0428240 | 0.822263 | 2.600820e-53 | -8.615850e-47 |
| Msa0187030 | Msa0428240 | 0.802989 | 4.317321e-49 | -8.615850e-47 |
| Msa0188890 | Msa0428240 | 0.807756 | 4.326327e-50 | -8.615850e-47 |
| Msa0196020 | Msa0428240 | -0.800188 | 1.620261e-48 | -8.615850e-47 |
| Msa0197660 | Msa0428240 | 0.806593 | 7.628510e-50 | -8.615850e-47 |
| Msa0208810 | Msa0428240 | 0.808639 | 2.805513e-50 | -8.615850e-47 |
| Msa0231380 | Msa0428240 | 0.811574 | 6.541500e-51 | -8.615850e-47 |
| Msa0231660 | Msa0428240 | 0.800996 | 1.108873e-48 | -8.615850e-47 |
| Msa0233730 | Msa0428240 | 0.800916 | 1.151539e-48 | -8.615850e-47 |
| Msa0235120 | Msa0428240 | 0.808614 | 2.841010e-50 | -8.615850e-47 |
| Msa0386920 | Msa0428240 | 0.802900 | 4.504987e-49 | -8.615850e-47 |
| Msa0392200 | Msa0428240 | 0.813289 | 2.759897e-51 | -8.615850e-47 |
| Msa0403660 | Msa0428240 | 0.803653 | 3.145970e-49 | -8.615850e-47 |
| Msa0405880 | Msa0428240 | 0.808042 | 3.761082e-50 | -8.615850e-47 |
| Msa0428050 | Msa0428240 | 0.830664 | 2.586234e-55 | -8.615850e-47 |
| Msa0428240 | Msa0451070 | 0.813252 | 2.811405e-51 | -8.615850e-47 |
| Msa0428240 | Msa0462220 | 0.814736 | 1.323472e-51 | -8.615850e-47 |
| Msa0428240 | Msa0474390 | 0.821332 | 4.271611e-53 | -8.615850e-47 |
| Msa0428240 | Msa0474490 | 0.821390 | 4.141826e-53 | -8.615850e-47 |
| Msa0428240 | Msa0474590 | 0.902356 | 1.054380e-78 | -8.615850e-47 |
| Msa0428240 | Msa0479170 | 0.806757 | 7.042753e-50 | -8.615850e-47 |
| Msa0428240 | Msa0479200 | 0.818758 | 1.658776e-52 | -8.615850e-47 |
| Msa0428240 | Msa0481460 | 0.829728 | 4.375146e-55 | -8.615850e-47 |
| Msa0428240 | Msa0490750 | 0.801039 | 1.086890e-48 | -8.615850e-47 |
| Msa0428240 | Msa0498450 | 0.803308 | 3.708116e-49 | -8.615850e-47 |
| Msa0428240 | Msa0517090 | 0.831541 | 1.574876e-55 | -8.615850e-47 |
| Msa0428240 | Msa0518030 | 0.804234 | 2.382747e-49 | -8.615850e-47 |
| Msa0428240 | Msa0518810 | 0.804633 | 1.967018e-49 | -8.615850e-47 |
| Msa0428240 | Msa0519130 | 0.949131 | 2.365147e-107 | -8.615850e-47 |
| Msa0428240 | Msa0532980 | 0.800804 | 1.213618e-48 | -8.615850e-47 |
| Msa0428240 | Msa0542160 | 0.810003 | 1.430386e-50 | -8.615850e-47 |
| Msa0428240 | Msa0556010 | 0.810043 | 1.402126e-50 | -8.615850e-47 |
| Msa0428240 | Msa0557050 | 0.800122 | 1.670922e-48 | -8.615850e-47 |
| Msa0428240 | Msa0573380 | 0.822045 | 2.922027e-53 | -8.615850e-47 |
| Msa0428240 | Msa0574390 | 0.837212 | 5.936951e-57 | -8.615850e-47 |
| Msa0428240 | Msa0576680 | 0.823642 | 1.241094e-53 | -8.615850e-47 |
| Msa0428240 | Msa0578090 | 0.833729 | 4.512670e-56 | -8.615850e-47 |
| Msa0428240 | Msa0581690 | 0.825231 | 5.246413e-54 | -8.615850e-47 |
| Msa0428240 | Msa0584550 | 0.801349 | 9.389353e-49 | -8.615850e-47 |
| Msa0428240 | Msa0586850 | 0.820804 | 5.652352e-53 | -8.615850e-47 |
| Msa0428240 | Msa0588820 | 0.804874 | 1.751581e-49 | -8.615850e-47 |
| Msa0428240 | Msa0620620 | 0.810081 | 1.376093e-50 | -8.615850e-47 |
| Msa0428240 | Msa0626680 | 0.814960 | 1.180657e-51 | -8.615850e-47 |
| Msa0428240 | Msa0658590 | 0.806120 | 9.595725e-50 | -8.615850e-47 |
| Msa0428240 | Msa0664760 | 0.823436 | 1.386226e-53 | -8.615850e-47 |
| Msa0428240 | Msa0664910 | 0.805234 | 1.473227e-49 | -8.615850e-47 |
| Msa0428240 | Msa0679700 | 0.820986 | 5.131070e-53 | -8.615850e-47 |
| Msa0428240 | Msa0691050 | 0.804492 | 2.105157e-49 | -8.615850e-47 |
| Msa0428240 | Msa0707470 | 0.803016 | 4.263320e-49 | -8.615850e-47 |
| Msa0428240 | Msa0716410 | 0.825620 | 4.243515e-54 | -8.615850e-47 |
| Msa0428240 | Msa0745200 | 0.802931 | 4.438005e-49 | -8.615850e-47 |
| Msa0428240 | Msa0787850 | 0.815375 | 9.546526e-52 | -8.615850e-47 |
| Msa0428240 | Msa0790610 | 0.809837 | 1.553280e-50 | -8.615850e-47 |
| Msa0428240 | Msa0799000 | 0.808371 | 3.200901e-50 | -8.615850e-47 |
| Msa0428240 | Msa0818160 | 0.809857 | 1.537852e-50 | -8.615850e-47 |
| Msa0428240 | Msa0824660 | 0.812396 | 4.329875e-51 | -8.615850e-47 |
| Msa0428240 | Msa0826760 | 0.810949 | 8.937389e-51 | -8.615850e-47 |
| Msa0428240 | Msa0830390 | 0.811377 | 7.217527e-51 | -8.615850e-47 |
| Msa0428240 | Msa0850710 | 0.804480 | 2.116895e-49 | -8.615850e-47 |
| Msa0428240 | Msa0863930 | 0.821258 | 4.442232e-53 | -8.615850e-47 |
| Msa0428240 | Msa0865570 | 0.802798 | 4.728939e-49 | -8.615850e-47 |
| Msa0428240 | Msa0895790 | 0.800336 | 1.512068e-48 | -8.615850e-47 |
| Msa0428240 | Msa0944660 | 0.807125 | 5.887922e-50 | -8.615850e-47 |
| Msa0428240 | Msa0947530 | -0.834846 | 2.366739e-56 | -8.615850e-47 |
| Msa0428240 | Msa1001350 | 0.805719 | 1.165328e-49 | -8.615850e-47 |
| Msa0428240 | Msa1031930 | 0.823053 | 1.703237e-53 | -8.615850e-47 |
| Msa0428240 | Msa1033660 | 0.803190 | 3.923187e-49 | -8.615850e-47 |
| Msa0428240 | Msa1038080 | 0.811196 | 7.901571e-51 | -8.615850e-47 |
| Msa0428240 | Msa1040840 | 0.850419 | 1.718866e-60 | -8.615850e-47 |
| Msa0428240 | Msa1041520 | 0.816843 | 4.486645e-52 | -8.615850e-47 |
| Msa0428240 | Msa1050910 | 0.800775 | 1.230255e-48 | -8.615850e-47 |
| Msa0428240 | Msa1066490 | 0.811470 | 6.888522e-51 | -8.615850e-47 |
| Msa0428240 | Msa1071770 | 0.801462 | 8.903076e-49 | -8.615850e-47 |
| Msa0428240 | Msa1080800 | 0.838463 | 2.833125e-57 | -8.615850e-47 |
| Msa0428240 | Msa1082690 | 0.800456 | 1.428802e-48 | -8.615850e-47 |
| Msa0428240 | Msa1118940 | 0.836673 | 8.150975e-57 | -8.615850e-47 |
| Msa0428240 | Msa1126450 | 0.807535 | 4.821707e-50 | -8.615850e-47 |
| Msa0428240 | Msa1172640 | 0.828514 | 8.620202e-55 | -8.615850e-47 |
| Msa0428240 | Msa1182770 | 0.800505 | 1.396484e-48 | -8.615850e-47 |
| Msa0428240 | Msa1208160 | 0.800766 | 1.235249e-48 | -8.615850e-47 |
| Msa0428240 | Msa1208890 | -0.815526 | 8.837624e-52 | -8.615850e-47 |
| Msa0428240 | Msa1226470 | 0.805637 | 1.212641e-49 | -8.615850e-47 |
| Msa0428240 | Msa1238930 | 0.803796 | 2.937758e-49 | -8.615850e-47 |
| Msa0428240 | Msa1245940 | -0.808744 | 2.664865e-50 | -8.615850e-47 |
| Msa0428240 | Msa1256850 | 0.806606 | 7.581816e-50 | -8.615850e-47 |
| Msa0428240 | Msa1259070 | -0.809201 | 2.127267e-50 | -8.615850e-47 |
| Msa0428240 | Msa1269580 | -0.805313 | 1.417947e-49 | -8.615850e-47 |
| Msa0428240 | Msa1277490 | 0.814940 | 1.192377e-51 | -8.615850e-47 |
| Msa0428240 | Msa1294960 | 0.814699 | 1.348567e-51 | -8.615850e-47 |
| Msa0428240 | Msa1298370 | 0.802990 | 4.316213e-49 | -8.615850e-47 |
| Msa0428240 | Msa1304860 | 0.804637 | 1.963689e-49 | -8.615850e-47 |
| Msa0428240 | Msa1338830 | 0.821394 | 4.133814e-53 | -8.615850e-47 |
| Msa0428240 | Msa1343420 | 0.809110 | 2.225011e-50 | -8.615850e-47 |
| Msa0428240 | Msa1346750 | 0.805121 | 1.555048e-49 | -8.615850e-47 |
| Msa0428240 | Msa1360980 | 0.815954 | 7.093973e-52 | -8.615850e-47 |
| Msa0428240 | Msa1370620 | 0.840131 | 1.046112e-57 | -8.615850e-47 |
| Msa0428240 | Msa1374060 | 0.804320 | 2.285911e-49 | -8.615850e-47 |
| Msa0428240 | Msa1382560 | 0.807486 | 4.936302e-50 | -8.615850e-47 |
| Msa0428240 | Msa1384870 | 0.812762 | 3.602009e-51 | -8.615850e-47 |
| Msa0428240 | Msa1386710 | 0.838312 | 3.098449e-57 | -8.615850e-47 |
| Msa0428240 | Msa1400610 | -0.813324 | 2.711112e-51 | -8.615850e-47 |
| Msa0428240 | Msa1415940 | 0.811805 | 5.824656e-51 | -8.615850e-47 |
| Msa0428240 | Msa1423350 | 0.819277 | 1.263853e-52 | -8.615850e-47 |
| Msa0428240 | Msa1424780 | 0.811472 | 6.883191e-51 | -8.615850e-47 |
| Msa0428240 | Msa1440310 | 0.800160 | 1.641424e-48 | -8.615850e-47 |
| Msa0428240 | Msa1447110 | 0.804065 | 2.582976e-49 | -8.615850e-47 |
| Msa0428240 | Msa1466090 | 0.828556 | 8.417196e-55 | -8.615850e-47 |
| Msa0239800 | Msa0428240 | 0.815040 | 1.133371e-51 | -8.615850e-47 |
| Msa0253290 | Msa0428240 | 0.801162 | 1.025630e-48 | -8.615850e-47 |
| Msa0266350 | Msa0428240 | 0.805786 | 1.128012e-49 | -8.615850e-47 |
| Msa0270660 | Msa0428240 | 0.809395 | 1.932986e-50 | -8.615850e-47 |
| Msa0271530 | Msa0428240 | 0.808127 | 3.608544e-50 | -8.615850e-47 |
| Msa0277450 | Msa0428240 | 0.834070 | 3.706861e-56 | -8.615850e-47 |
| Msa0313740 | Msa0428240 | 0.804528 | 2.068935e-49 | -8.615850e-47 |
| Msa0317160 | Msa0428240 | 0.819486 | 1.132736e-52 | -8.615850e-47 |
| Msa0317510 | Msa0428240 | 0.814804 | 1.278494e-51 | -8.615850e-47 |
| Msa0342010 | Msa0428240 | 0.805211 | 1.489450e-49 | -8.615850e-47 |
| Msa0345330 | Msa0428240 | 0.801086 | 1.062899e-48 | -8.615850e-47 |
| Msa0346990 | Msa0428240 | 0.802228 | 6.197155e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428240 | MtrunA17_Chr3g0131501 | 95.556 | 495 | 10 | 1 | 1 | 495 | 1 | 483 | 0.0 | 980 |
| Msa0428240 | MtrunA17_Chr8g0385571 | 77.710 | 489 | 97 | 1 | 7 | 495 | 29 | 505 | 0.0 | 797 |
| Msa0428240 | MtrunA17_Chr7g0252401 | 67.689 | 489 | 139 | 3 | 9 | 495 | 11 | 482 | 0.0 | 696 |
| Msa0428240 | MtrunA17_Chr8g0347451 | 40.777 | 309 | 154 | 8 | 215 | 495 | 49 | 356 | 1.51e-67 | 221 |
| Msa0428240 | MtrunA17_Chr5g0396801 | 42.020 | 307 | 151 | 8 | 215 | 495 | 36 | 341 | 6.78e-66 | 216 |
| Msa0428240 | MtrunA17_Chr3g0137941 | 36.331 | 278 | 173 | 3 | 215 | 492 | 120 | 393 | 5.67e-53 | 184 |
| Msa0428240 | MtrunA17_Chr1g0149111 | 36.331 | 278 | 173 | 2 | 215 | 492 | 137 | 410 | 4.81e-52 | 182 |
| Msa0428240 | MtrunA17_Chr1g0149111 | 30.939 | 181 | 122 | 3 | 214 | 392 | 230 | 409 | 1.99e-17 | 84.3 |
| Msa0428240 | MtrunA17_Chr4g0063561 | 36.201 | 279 | 172 | 4 | 215 | 492 | 121 | 394 | 6.46e-50 | 176 |
| Msa0428240 | MtrunA17_Chr6g0488081 | 32.432 | 296 | 178 | 6 | 214 | 492 | 16 | 306 | 2.02e-45 | 161 |
| Msa0428240 | MtrunA17_Chr7g0240341 | 30.696 | 316 | 192 | 8 | 198 | 493 | 7 | 315 | 2.68e-45 | 161 |
| Msa0428240 | MtrunA17_Chr7g0240341 | 29.130 | 230 | 143 | 7 | 177 | 396 | 98 | 317 | 6.64e-22 | 96.3 |
| Msa0428240 | MtrunA17_Chr3g0135861 | 30.945 | 307 | 177 | 7 | 215 | 494 | 33 | 331 | 2.50e-44 | 159 |
| Msa0428240 | MtrunA17_Chr3g0135861 | 27.184 | 206 | 122 | 5 | 311 | 495 | 35 | 233 | 7.54e-16 | 79.0 |
| Msa0428240 | MtrunA17_Chr2g0296061 | 31.475 | 305 | 169 | 6 | 219 | 486 | 17 | 318 | 3.24e-41 | 150 |
| Msa0428240 | MtrunA17_Chr2g0296061 | 29.381 | 194 | 118 | 4 | 313 | 490 | 17 | 207 | 1.07e-19 | 90.1 |
| Msa0428240 | MtrunA17_Chr2g0296061 | 24.638 | 207 | 128 | 7 | 210 | 391 | 119 | 322 | 2.33e-11 | 65.1 |
| Msa0428240 | MtrunA17_Chr5g0436041 | 33.788 | 293 | 172 | 9 | 217 | 492 | 34 | 321 | 3.64e-41 | 150 |
| Msa0428240 | MtrunA17_Chr5g0436041 | 29.958 | 237 | 141 | 7 | 169 | 390 | 92 | 318 | 5.48e-19 | 88.2 |
| Msa0428240 | MtrunA17_Chr5g0436041 | 32.663 | 199 | 115 | 5 | 304 | 489 | 27 | 219 | 1.12e-14 | 75.1 |
| Msa0428240 | MtrunA17_Chr4g0006851 | 31.579 | 304 | 175 | 8 | 197 | 490 | 76 | 356 | 1.67e-39 | 147 |
| Msa0428240 | MtrunA17_Chr4g0006851 | 27.841 | 176 | 114 | 3 | 322 | 492 | 100 | 267 | 1.53e-13 | 72.0 |
| Msa0428240 | MtrunA17_Chr7g0242311 | 31.502 | 273 | 161 | 7 | 228 | 490 | 98 | 354 | 2.95e-38 | 143 |
| Msa0428240 | MtrunA17_Chr7g0242311 | 29.545 | 176 | 111 | 4 | 322 | 492 | 98 | 265 | 2.29e-17 | 84.0 |
| Msa0428240 | MtrunA17_Chr7g0242311 | 24.713 | 174 | 124 | 2 | 219 | 392 | 189 | 355 | 3.23e-14 | 74.3 |
| Msa0428240 | MtrunA17_Chr4g0067231 | 28.662 | 314 | 182 | 6 | 219 | 493 | 16 | 326 | 2.03e-37 | 140 |
| Msa0428240 | MtrunA17_Chr4g0067231 | 23.671 | 207 | 130 | 6 | 210 | 391 | 120 | 323 | 1.69e-11 | 65.5 |
| Msa0428240 | MtrunA17_Chr7g0269701 | 30.928 | 291 | 176 | 7 | 219 | 492 | 24 | 306 | 5.00e-36 | 136 |
| Msa0428240 | MtrunA17_Chr1g0195101 | 31.673 | 281 | 167 | 6 | 229 | 492 | 31 | 303 | 2.46e-34 | 131 |
| Msa0428240 | MtrunA17_Chr3g0115801 | 31.908 | 304 | 179 | 8 | 212 | 495 | 111 | 406 | 2.53e-32 | 127 |
| Msa0428240 | MtrunA17_Chr8g0382201 | 32.808 | 317 | 177 | 12 | 205 | 495 | 179 | 485 | 8.02e-32 | 127 |
| Msa0428240 | MtrunA17_Chr3g0135801 | 26.367 | 311 | 193 | 8 | 208 | 494 | 25 | 323 | 8.70e-30 | 119 |
| Msa0428240 | MtrunA17_Chr4g0000261 | 28.571 | 301 | 183 | 8 | 217 | 495 | 66 | 356 | 1.87e-29 | 119 |
| Msa0428240 | MtrunA17_Chr5g0423111 | 32.734 | 278 | 168 | 10 | 229 | 492 | 33 | 305 | 5.03e-29 | 117 |
| Msa0428240 | MtrunA17_Chr6g0488341 | 28.862 | 246 | 151 | 6 | 253 | 492 | 4 | 231 | 1.72e-28 | 113 |
| Msa0428240 | MtrunA17_Chr4g0004571 | 26.389 | 288 | 201 | 6 | 204 | 486 | 5 | 286 | 2.12e-26 | 108 |
| Msa0428240 | MtrunA17_Chr3g0086811 | 28.221 | 326 | 191 | 9 | 204 | 493 | 14 | 332 | 3.76e-26 | 109 |
| Msa0428240 | MtrunA17_Chr8g0372531 | 29.537 | 281 | 176 | 7 | 233 | 494 | 30 | 307 | 2.88e-24 | 103 |
| Msa0428240 | MtrunA17_Chr8g0372531 | 27.326 | 172 | 118 | 4 | 325 | 492 | 28 | 196 | 4.06e-16 | 79.3 |
| Msa0428240 | MtrunA17_Chr6g0463041 | 28.182 | 220 | 116 | 4 | 311 | 492 | 25 | 240 | 4.00e-24 | 101 |
| Msa0428240 | MtrunA17_Chr6g0463041 | 28.472 | 144 | 92 | 4 | 253 | 391 | 101 | 238 | 1.62e-11 | 64.7 |
| Msa0428240 | MtrunA17_Chr8g0393031 | 26.596 | 282 | 187 | 6 | 215 | 480 | 16 | 293 | 4.23e-24 | 102 |
| Msa0428240 | MtrunA17_Chr5g0431531 | 27.972 | 286 | 184 | 8 | 215 | 489 | 37 | 311 | 3.93e-22 | 97.1 |
| Msa0428240 | MtrunA17_Chr5g0431531 | 29.891 | 184 | 119 | 4 | 311 | 493 | 39 | 213 | 1.26e-19 | 89.7 |
| Msa0428240 | MtrunA17_Chr1g0200171 | 20.734 | 463 | 326 | 11 | 35 | 493 | 360 | 785 | 4.45e-22 | 100 |
| Msa0428240 | MtrunA17_Chr3g0088301 | 27.907 | 301 | 184 | 10 | 204 | 480 | 77 | 368 | 2.43e-19 | 89.7 |
| Msa0428240 | MtrunA17_Chr8g0386871 | 26.027 | 292 | 190 | 8 | 213 | 495 | 316 | 590 | 2.58e-19 | 91.3 |
| Msa0428240 | MtrunA17_Chr2g0331771 | 26.481 | 287 | 203 | 4 | 212 | 493 | 151 | 434 | 3.77e-19 | 89.7 |
| Msa0428240 | MtrunA17_Chr5g0411411 | 27.815 | 302 | 185 | 10 | 214 | 492 | 6 | 297 | 1.52e-18 | 86.3 |
| Msa0428240 | MtrunA17_Chr1g0201361 | 26.259 | 278 | 177 | 7 | 218 | 492 | 52 | 304 | 1.67e-18 | 86.3 |
| Msa0428240 | MtrunA17_Chr8g0366791 | 26.797 | 306 | 183 | 7 | 214 | 492 | 6 | 297 | 1.80e-18 | 85.9 |
| Msa0428240 | MtrunA17_Chr8g0352031 | 26.690 | 281 | 185 | 6 | 217 | 480 | 68 | 344 | 6.03e-18 | 85.5 |
| Msa0428240 | MtrunA17_Chr5g0436571 | 26.792 | 265 | 158 | 9 | 257 | 488 | 54 | 315 | 8.79e-18 | 84.7 |
| Msa0428240 | MtrunA17_Chr8g0383321 | 26.619 | 278 | 176 | 6 | 218 | 492 | 53 | 305 | 3.52e-17 | 82.4 |
| Msa0428240 | MtrunA17_Chr8g0383321 | 30.556 | 180 | 100 | 6 | 311 | 489 | 52 | 207 | 1.68e-14 | 74.7 |
| Msa0428240 | MtrunA17_Chr4g0028531 | 24.742 | 291 | 185 | 10 | 218 | 488 | 23 | 299 | 4.54e-17 | 82.0 |
| Msa0428240 | MtrunA17_Chr1g0196921 | 28.090 | 178 | 118 | 4 | 300 | 471 | 4 | 177 | 1.89e-16 | 80.1 |
| Msa0428240 | MtrunA17_Chr1g0196921 | 23.404 | 282 | 198 | 7 | 222 | 490 | 19 | 295 | 2.70e-16 | 79.7 |
| Msa0428240 | MtrunA17_Chr4g0040341 | 28.470 | 281 | 179 | 9 | 217 | 480 | 75 | 350 | 2.39e-16 | 80.9 |
| Msa0428240 | MtrunA17_Chr1g0163521 | 27.113 | 284 | 148 | 12 | 265 | 494 | 79 | 357 | 3.23e-16 | 80.1 |
| Msa0428240 | MtrunA17_Chr6g0455381 | 24.918 | 305 | 207 | 7 | 204 | 490 | 4 | 304 | 3.85e-16 | 79.3 |
| Msa0428240 | MtrunA17_Chr6g0455381 | 24.599 | 187 | 133 | 5 | 311 | 492 | 18 | 201 | 2.60e-11 | 64.7 |
| Msa0428240 | MtrunA17_Chr4g0008061 | 26.190 | 294 | 184 | 9 | 217 | 490 | 15 | 295 | 6.02e-16 | 78.6 |
| Msa0428240 | MtrunA17_Chr2g0328891 | 28.470 | 281 | 179 | 9 | 217 | 480 | 66 | 341 | 1.72e-15 | 78.2 |
| Msa0428240 | MtrunA17_Chr6g0463351 | 24.436 | 266 | 182 | 6 | 233 | 489 | 83 | 338 | 4.55e-15 | 76.6 |
| Msa0428240 | MtrunA17_Chr3g0133111 | 24.684 | 316 | 191 | 7 | 215 | 492 | 4 | 310 | 5.80e-15 | 75.9 |
| Msa0428240 | MtrunA17_Chr7g0219891 | 25.000 | 308 | 187 | 9 | 212 | 490 | 16 | 308 | 7.53e-15 | 75.5 |
| Msa0428240 | MtrunA17_Chr7g0219891 | 28.500 | 200 | 115 | 6 | 218 | 395 | 119 | 312 | 7.03e-12 | 66.6 |
| Msa0428240 | MtrunA17_Chr6g0488171 | 33.663 | 101 | 65 | 1 | 394 | 492 | 2 | 102 | 4.08e-14 | 68.6 |
| Msa0428240 | MtrunA17_Chr8g0385891 | 26.984 | 252 | 160 | 8 | 219 | 453 | 74 | 318 | 5.45e-14 | 73.2 |
| Msa0428240 | MtrunA17_Chr7g0241521 | 24.832 | 298 | 183 | 8 | 217 | 490 | 17 | 297 | 1.02e-13 | 72.0 |
| Msa0428240 | MtrunA17_Chr3g0103681 | 25.753 | 299 | 194 | 7 | 210 | 490 | 8 | 296 | 1.51e-13 | 71.2 |
| Msa0428240 | MtrunA17_Chr6g0461981 | 26.230 | 244 | 159 | 7 | 218 | 447 | 64 | 300 | 7.34e-13 | 70.1 |
| Msa0428240 | MtrunA17_Chr7g0251981 | 29.289 | 239 | 149 | 9 | 219 | 443 | 83 | 315 | 1.13e-12 | 69.3 |
| Msa0428240 | MtrunA17_Chr8g0378951 | 22.887 | 284 | 203 | 7 | 215 | 490 | 19 | 294 | 1.16e-12 | 68.6 |
| Msa0428240 | MtrunA17_Chr2g0293621 | 23.906 | 297 | 205 | 10 | 212 | 490 | 24 | 317 | 1.18e-12 | 68.9 |
| Msa0428240 | MtrunA17_Chr1g0196161 | 28.889 | 180 | 123 | 4 | 317 | 495 | 3 | 178 | 1.99e-12 | 65.9 |
| Msa0428240 | MtrunA17_Chr3g0136041 | 23.810 | 336 | 211 | 9 | 196 | 490 | 10 | 341 | 2.17e-12 | 68.6 |
| Msa0428240 | MtrunA17_Chr3g0136041 | 33.333 | 156 | 83 | 5 | 261 | 395 | 190 | 345 | 4.86e-12 | 67.4 |
| Msa0428240 | MtrunA17_Chr4g0046981 | 27.368 | 190 | 125 | 4 | 312 | 492 | 13 | 198 | 3.65e-12 | 67.4 |
| Msa0428240 | MtrunA17_Chr4g0051841 | 22.535 | 284 | 197 | 9 | 217 | 489 | 29 | 300 | 9.12e-12 | 66.2 |
| Msa0428240 | MtrunA17_Chr5g0407451 | 23.729 | 177 | 122 | 4 | 312 | 486 | 22 | 187 | 1.99e-11 | 65.1 |
| Msa0428240 | MtrunA17_Chr7g0275411 | 22.619 | 252 | 175 | 7 | 259 | 493 | 88 | 336 | 2.87e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428240 | AT5G51050.1 | 69.325 | 489 | 131 | 4 | 9 | 495 | 27 | 498 | 0.0 | 702 |
| Msa0428240 | AT5G07320.1 | 68.994 | 487 | 131 | 3 | 9 | 495 | 13 | 479 | 0.0 | 696 |
| Msa0428240 | AT5G61810.1 | 66.189 | 488 | 143 | 5 | 9 | 495 | 12 | 478 | 0.0 | 665 |
| Msa0428240 | AT5G61810.2 | 69.767 | 344 | 94 | 4 | 153 | 495 | 1 | 335 | 9.73e-176 | 497 |
| Msa0428240 | AT4G01100.1 | 40.952 | 315 | 145 | 8 | 215 | 495 | 40 | 347 | 5.41e-70 | 227 |
| Msa0428240 | AT4G01100.2 | 39.877 | 326 | 147 | 8 | 215 | 495 | 40 | 361 | 1.32e-68 | 224 |
| Msa0428240 | AT4G01100.3 | 40.594 | 303 | 139 | 8 | 227 | 495 | 2 | 297 | 5.66e-66 | 215 |
| Msa0428240 | AT4G01100.3 | 26.857 | 175 | 123 | 1 | 320 | 489 | 1 | 175 | 1.79e-19 | 89.4 |
| Msa0428240 | AT4G01100.3 | 27.919 | 197 | 119 | 4 | 219 | 392 | 97 | 293 | 4.32e-16 | 79.3 |
| Msa0428240 | AT4G32400.1 | 37.413 | 286 | 172 | 5 | 209 | 492 | 105 | 385 | 4.67e-54 | 187 |
| Msa0428240 | AT3G53940.1 | 34.114 | 299 | 179 | 7 | 210 | 493 | 66 | 361 | 5.21e-48 | 170 |
| Msa0428240 | AT3G55640.1 | 33.444 | 302 | 183 | 7 | 203 | 489 | 24 | 322 | 1.17e-46 | 165 |
| Msa0428240 | AT3G55640.4 | 33.444 | 302 | 183 | 7 | 203 | 489 | 24 | 322 | 1.17e-46 | 165 |
| Msa0428240 | AT2G37890.1 | 32.432 | 296 | 172 | 7 | 217 | 492 | 45 | 332 | 1.41e-43 | 157 |
| Msa0428240 | AT2G37890.1 | 28.261 | 276 | 184 | 7 | 125 | 392 | 62 | 331 | 2.16e-26 | 110 |
| Msa0428240 | AT2G37890.1 | 34.694 | 196 | 117 | 4 | 303 | 489 | 37 | 230 | 1.36e-23 | 102 |
| Msa0428240 | AT4G26180.1 | 30.435 | 299 | 185 | 6 | 214 | 494 | 18 | 311 | 4.60e-43 | 155 |
| Msa0428240 | AT4G26180.1 | 35.149 | 202 | 112 | 4 | 308 | 495 | 18 | 214 | 8.33e-29 | 116 |
| Msa0428240 | AT1G14560.1 | 31.010 | 287 | 166 | 8 | 228 | 489 | 38 | 317 | 3.15e-40 | 148 |
| Msa0428240 | AT1G14560.1 | 29.474 | 190 | 113 | 4 | 322 | 495 | 38 | 222 | 8.07e-20 | 90.9 |
| Msa0428240 | AT4G26180.2 | 29.749 | 279 | 173 | 6 | 214 | 474 | 18 | 291 | 1.98e-37 | 139 |
| Msa0428240 | AT4G26180.2 | 35.149 | 202 | 112 | 4 | 308 | 495 | 18 | 214 | 3.66e-29 | 116 |
| Msa0428240 | AT5G01500.1 | 31.502 | 273 | 161 | 9 | 228 | 490 | 130 | 386 | 3.04e-36 | 139 |
| Msa0428240 | AT5G01500.1 | 30.114 | 176 | 110 | 4 | 322 | 492 | 130 | 297 | 8.81e-17 | 82.8 |
| Msa0428240 | AT5G01500.1 | 27.586 | 174 | 119 | 2 | 219 | 392 | 221 | 387 | 5.58e-12 | 68.2 |
| Msa0428240 | AT3G21390.1 | 29.545 | 308 | 173 | 6 | 219 | 486 | 21 | 324 | 7.89e-36 | 136 |
| Msa0428240 | AT3G21390.1 | 30.729 | 192 | 116 | 5 | 313 | 490 | 21 | 209 | 3.71e-20 | 92.0 |
| Msa0428240 | AT3G21390.2 | 29.545 | 308 | 173 | 6 | 219 | 486 | 43 | 346 | 1.12e-35 | 136 |
| Msa0428240 | AT3G21390.2 | 30.729 | 192 | 116 | 5 | 313 | 490 | 43 | 231 | 5.28e-20 | 92.0 |
| Msa0428240 | AT5G64970.1 | 31.975 | 319 | 177 | 9 | 203 | 495 | 121 | 425 | 9.18e-35 | 135 |
| Msa0428240 | AT3G51870.1 | 29.044 | 272 | 169 | 7 | 228 | 490 | 102 | 358 | 1.24e-34 | 134 |
| Msa0428240 | AT3G51870.1 | 27.807 | 187 | 125 | 3 | 219 | 402 | 193 | 372 | 9.56e-15 | 76.3 |
| Msa0428240 | AT3G51870.1 | 27.933 | 179 | 116 | 4 | 322 | 495 | 102 | 272 | 4.33e-14 | 74.3 |
| Msa0428240 | AT5G48970.1 | 28.710 | 310 | 174 | 8 | 219 | 486 | 24 | 328 | 5.52e-34 | 131 |
| Msa0428240 | AT5G48970.1 | 30.612 | 196 | 113 | 6 | 313 | 490 | 24 | 214 | 5.91e-20 | 91.7 |
| Msa0428240 | AT5G48970.1 | 22.967 | 209 | 132 | 5 | 210 | 391 | 126 | 332 | 1.64e-11 | 66.2 |
| Msa0428240 | AT1G14560.2 | 29.779 | 272 | 159 | 8 | 228 | 474 | 38 | 302 | 8.77e-34 | 130 |
| Msa0428240 | AT1G14560.2 | 29.474 | 190 | 113 | 4 | 322 | 495 | 38 | 222 | 5.14e-20 | 91.3 |
| Msa0428240 | AT5G64970.2 | 32.119 | 302 | 165 | 9 | 220 | 495 | 14 | 301 | 2.23e-32 | 126 |
| Msa0428240 | AT1G78180.1 | 31.683 | 303 | 181 | 6 | 212 | 495 | 123 | 418 | 3.00e-30 | 122 |
| Msa0428240 | AT3G55640.2 | 31.897 | 232 | 142 | 5 | 203 | 421 | 24 | 252 | 2.99e-29 | 116 |
| Msa0428240 | AT3G55640.2 | 28.571 | 203 | 130 | 4 | 299 | 490 | 26 | 224 | 1.08e-18 | 86.3 |
| Msa0428240 | AT3G55640.3 | 31.897 | 232 | 142 | 5 | 203 | 421 | 24 | 252 | 2.99e-29 | 116 |
| Msa0428240 | AT3G55640.3 | 28.571 | 203 | 130 | 4 | 299 | 490 | 26 | 224 | 1.08e-18 | 86.3 |
| Msa0428240 | AT3G53940.2 | 33.333 | 225 | 134 | 5 | 210 | 421 | 66 | 287 | 1.22e-28 | 115 |
| Msa0428240 | AT3G53940.2 | 32.367 | 207 | 126 | 5 | 292 | 489 | 57 | 258 | 3.89e-21 | 94.0 |
| Msa0428240 | AT3G20240.1 | 27.213 | 305 | 190 | 8 | 210 | 492 | 45 | 339 | 1.59e-28 | 116 |
| Msa0428240 | AT5G48970.2 | 28.295 | 258 | 163 | 5 | 250 | 486 | 1 | 257 | 2.44e-28 | 114 |
| Msa0428240 | AT5G48970.2 | 31.944 | 144 | 88 | 3 | 352 | 490 | 5 | 143 | 6.63e-16 | 78.2 |
| Msa0428240 | AT5G48970.2 | 22.967 | 209 | 132 | 5 | 210 | 391 | 55 | 261 | 2.59e-12 | 67.8 |
| Msa0428240 | AT2G47490.1 | 30.072 | 276 | 177 | 5 | 229 | 492 | 29 | 300 | 2.96e-28 | 114 |
| Msa0428240 | AT1G74240.1 | 28.852 | 305 | 184 | 6 | 217 | 492 | 36 | 336 | 4.65e-28 | 115 |
| Msa0428240 | AT1G74240.1 | 29.126 | 206 | 119 | 4 | 311 | 493 | 36 | 237 | 9.81e-20 | 91.3 |
| Msa0428240 | AT1G14560.3 | 32.663 | 199 | 110 | 5 | 311 | 489 | 25 | 219 | 5.38e-28 | 112 |
| Msa0428240 | AT1G14560.3 | 27.500 | 200 | 116 | 5 | 217 | 391 | 25 | 220 | 1.24e-14 | 73.9 |
| Msa0428240 | AT1G14560.3 | 27.273 | 121 | 72 | 2 | 391 | 495 | 4 | 124 | 2.68e-11 | 63.9 |
| Msa0428240 | AT5G66380.1 | 30.241 | 291 | 184 | 7 | 219 | 492 | 12 | 300 | 7.93e-28 | 113 |
| Msa0428240 | AT5G66380.1 | 28.571 | 189 | 119 | 4 | 223 | 396 | 116 | 303 | 4.95e-11 | 64.3 |
| Msa0428240 | AT5G56450.1 | 25.497 | 302 | 195 | 6 | 215 | 493 | 32 | 326 | 1.66e-27 | 113 |
| Msa0428240 | AT5G64970.3 | 30.272 | 294 | 173 | 8 | 203 | 474 | 121 | 404 | 4.17e-27 | 113 |
| Msa0428240 | AT5G64970.3 | 28.492 | 179 | 120 | 3 | 311 | 489 | 135 | 305 | 1.42e-12 | 69.7 |
| Msa0428240 | AT1G25380.1 | 28.261 | 276 | 176 | 7 | 229 | 488 | 33 | 302 | 7.72e-27 | 112 |
| Msa0428240 | AT1G25380.2 | 28.261 | 276 | 176 | 7 | 229 | 488 | 33 | 302 | 7.72e-27 | 112 |
| Msa0428240 | AT2G35800.1 | 21.627 | 467 | 322 | 13 | 35 | 493 | 380 | 810 | 3.62e-25 | 110 |
| Msa0428240 | AT1G74240.2 | 28.028 | 289 | 175 | 6 | 233 | 492 | 4 | 288 | 2.04e-24 | 103 |
| Msa0428240 | AT1G74240.2 | 28.646 | 192 | 110 | 5 | 325 | 493 | 2 | 189 | 2.17e-16 | 80.5 |
| Msa0428240 | AT4G11440.1 | 26.733 | 303 | 196 | 8 | 204 | 494 | 317 | 605 | 9.33e-23 | 102 |
| Msa0428240 | AT4G11440.2 | 26.733 | 303 | 196 | 8 | 204 | 494 | 317 | 605 | 9.33e-23 | 102 |
| Msa0428240 | AT2G30160.1 | 28.720 | 289 | 182 | 8 | 215 | 489 | 40 | 318 | 1.42e-21 | 96.3 |
| Msa0428240 | AT2G30160.1 | 27.322 | 183 | 123 | 4 | 311 | 492 | 42 | 215 | 1.72e-15 | 78.2 |
| Msa0428240 | AT1G14140.1 | 24.161 | 298 | 205 | 8 | 207 | 489 | 6 | 297 | 2.14e-20 | 92.0 |
| Msa0428240 | AT1G34065.2 | 26.689 | 296 | 187 | 8 | 203 | 493 | 59 | 329 | 2.43e-20 | 92.4 |
| Msa0428240 | AT1G34065.1 | 26.689 | 296 | 187 | 8 | 203 | 493 | 66 | 336 | 2.76e-20 | 92.4 |
| Msa0428240 | AT4G39460.2 | 28.520 | 277 | 174 | 6 | 217 | 492 | 58 | 311 | 5.36e-20 | 91.3 |
| Msa0428240 | AT4G39460.1 | 28.520 | 277 | 174 | 6 | 217 | 492 | 58 | 311 | 5.36e-20 | 91.3 |
| Msa0428240 | AT4G39460.3 | 28.520 | 277 | 174 | 6 | 217 | 492 | 58 | 311 | 5.36e-20 | 91.3 |
| Msa0428240 | AT5G17400.1 | 25.517 | 290 | 196 | 6 | 207 | 480 | 4 | 289 | 8.02e-20 | 90.5 |
| Msa0428240 | AT1G07030.1 | 28.421 | 285 | 185 | 8 | 215 | 489 | 38 | 313 | 9.03e-20 | 90.9 |
| Msa0428240 | AT1G07030.1 | 28.962 | 183 | 120 | 4 | 311 | 492 | 40 | 213 | 7.04e-16 | 79.3 |
| Msa0428240 | AT5G46800.2 | 26.230 | 305 | 195 | 8 | 211 | 492 | 2 | 299 | 1.60e-18 | 86.7 |
| Msa0428240 | AT5G46800.3 | 26.230 | 305 | 195 | 8 | 211 | 492 | 2 | 299 | 1.60e-18 | 86.7 |
| Msa0428240 | AT5G46800.1 | 26.230 | 305 | 195 | 8 | 211 | 492 | 2 | 299 | 1.60e-18 | 86.7 |
| Msa0428240 | AT3G54110.1 | 27.090 | 299 | 179 | 10 | 215 | 490 | 13 | 295 | 2.22e-18 | 86.3 |
| Msa0428240 | AT5G13490.1 | 27.778 | 288 | 173 | 8 | 217 | 480 | 88 | 364 | 1.02e-17 | 85.5 |
| Msa0428240 | AT5G13490.2 | 27.778 | 288 | 173 | 8 | 217 | 480 | 88 | 364 | 1.02e-17 | 85.5 |
| Msa0428240 | AT5G58970.1 | 26.962 | 293 | 183 | 9 | 217 | 490 | 16 | 296 | 1.24e-17 | 84.0 |
| Msa0428240 | AT4G28390.1 | 27.758 | 281 | 181 | 9 | 217 | 480 | 83 | 358 | 1.43e-17 | 84.7 |
| Msa0428240 | AT4G28390.2 | 27.758 | 281 | 181 | 9 | 217 | 480 | 83 | 358 | 1.43e-17 | 84.7 |
| Msa0428240 | AT5G01340.1 | 24.653 | 288 | 190 | 11 | 218 | 488 | 18 | 295 | 3.94e-16 | 79.7 |
| Msa0428240 | AT2G39970.1 | 27.511 | 229 | 134 | 8 | 292 | 494 | 101 | 323 | 4.94e-16 | 79.7 |
| Msa0428240 | AT3G08580.2 | 25.267 | 281 | 189 | 6 | 217 | 480 | 84 | 360 | 8.04e-15 | 76.6 |
| Msa0428240 | AT3G08580.1 | 25.267 | 281 | 189 | 6 | 217 | 480 | 84 | 360 | 8.04e-15 | 76.6 |
| Msa0428240 | AT5G15640.2 | 24.759 | 311 | 206 | 9 | 207 | 495 | 11 | 315 | 8.99e-15 | 75.9 |
| Msa0428240 | AT5G15640.2 | 30.952 | 210 | 122 | 8 | 202 | 392 | 106 | 311 | 2.55e-14 | 74.3 |
| Msa0428240 | AT1G72820.1 | 23.676 | 321 | 212 | 7 | 203 | 490 | 16 | 336 | 1.02e-14 | 75.9 |
| Msa0428240 | AT1G72820.1 | 26.512 | 215 | 122 | 7 | 220 | 400 | 131 | 343 | 5.83e-11 | 64.3 |
| Msa0428240 | AT1G72820.2 | 23.676 | 321 | 212 | 7 | 203 | 490 | 16 | 336 | 1.02e-14 | 75.9 |
| Msa0428240 | AT1G72820.2 | 26.512 | 215 | 122 | 7 | 220 | 400 | 131 | 343 | 5.83e-11 | 64.3 |
| Msa0428240 | AT5G15640.1 | 30.952 | 210 | 122 | 8 | 202 | 392 | 113 | 318 | 2.73e-14 | 74.3 |
| Msa0428240 | AT5G15640.1 | 24.510 | 306 | 203 | 9 | 212 | 495 | 23 | 322 | 3.60e-14 | 73.9 |
| Msa0428240 | AT5G26200.1 | 25.413 | 303 | 201 | 8 | 212 | 490 | 34 | 335 | 5.11e-14 | 73.6 |
| Msa0428240 | AT1G79900.1 | 23.673 | 245 | 179 | 2 | 223 | 467 | 22 | 258 | 6.91e-14 | 72.8 |
| Msa0428240 | AT1G79900.1 | 28.402 | 169 | 117 | 3 | 220 | 387 | 112 | 277 | 7.37e-14 | 72.8 |
| Msa0428240 | AT5G19760.1 | 23.860 | 285 | 199 | 8 | 215 | 490 | 16 | 291 | 5.34e-13 | 70.1 |
| Msa0428240 | AT5G14040.1 | 29.032 | 248 | 158 | 9 | 220 | 453 | 84 | 327 | 5.93e-13 | 70.9 |
| Msa0428240 | AT2G26360.1 | 23.571 | 280 | 196 | 6 | 215 | 492 | 113 | 376 | 8.01e-13 | 70.5 |
| Msa0428240 | AT3G48850.1 | 27.237 | 257 | 162 | 9 | 216 | 453 | 66 | 316 | 1.12e-11 | 66.6 |
| Msa0428240 | AT2G33820.1 | 23.607 | 305 | 198 | 12 | 215 | 495 | 16 | 309 | 2.08e-11 | 65.5 |
| Msa0428240 | AT4G27940.1 | 27.727 | 220 | 128 | 8 | 205 | 399 | 195 | 408 | 2.63e-11 | 65.9 |
| Msa0428240 | AT5G42130.1 | 25.094 | 267 | 180 | 8 | 233 | 489 | 134 | 390 | 7.09e-11 | 64.7 |
| Msa0428240 | AT3G05290.1 | 24.662 | 296 | 184 | 12 | 219 | 488 | 13 | 295 | 9.50e-11 | 63.5 |
Find 145 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGGATGTGGGACAATTTC+TGG | 0.159419 | 3_2:-79098137 | Msa0428240:CDS |
| TTCTTTGATGGAGGGAATAA+TGG | 0.216426 | 3_2:-79100452 | Msa0428240:CDS |
| AAGAAAATTATTACTCCTTT+AGG | 0.230419 | 3_2:-79097568 | Msa0428240:three_prime_UTR |
| TAGAATTTGATTGCACTTTC+CGG | 0.232865 | 3_2:+79098648 | None:intergenic |
| GAACAGTTCCGATGCTTATA+AGG | 0.241893 | 3_2:-79097917 | Msa0428240:CDS |
| TATTACTCCTTTAGGCAATA+TGG | 0.247397 | 3_2:-79097560 | Msa0428240:three_prime_UTR |
| ATCATGAATAATATATTTCT+TGG | 0.252850 | 3_2:+79098305 | None:intergenic |
| AAGAAATAACTATACCTAAT+TGG | 0.287088 | 3_2:+79097653 | None:intergenic |
| GAACCCTCACAAAGAATATA+TGG | 0.303659 | 3_2:-79098437 | Msa0428240:CDS |
| CAATGAGTTTAGGAGATATA+TGG | 0.307264 | 3_2:-79100309 | Msa0428240:CDS |
| GGCACAACTTTGAGTAGATT+TGG | 0.313751 | 3_2:+79097826 | None:intergenic |
| AGAGCATCCCAAAGCTCTTC+AGG | 0.318069 | 3_2:+79100218 | None:intergenic |
| TTTCAGCATGAAGGCTTTAG+AGG | 0.319780 | 3_2:-79097868 | Msa0428240:CDS |
| TCAAATTTCAAATGCTCAAA+AGG | 0.323030 | 3_2:-79100627 | Msa0428240:five_prime_UTR |
| CAAGGTAACAATTCGGATAT+TGG | 0.324252 | 3_2:-79098588 | Msa0428240:CDS |
| TATTCTTCCTGAAGAGCTTT+GGG | 0.324433 | 3_2:-79100225 | Msa0428240:CDS |
| TGATCTAGTGAAATGTTTCT+TGG | 0.329861 | 3_2:+79100539 | None:intergenic |
| CACCACCCATTGTGTTGATT+TGG | 0.334992 | 3_2:+79100582 | None:intergenic |
| TATGGAAGCAAGATAATATA+CGG | 0.336371 | 3_2:-79098713 | Msa0428240:CDS |
| AAGGGTGACTGACTGCATTT+TGG | 0.338172 | 3_2:+79100908 | None:intergenic |
| AGCTGCGAGCATTACTTATA+TGG | 0.341395 | 3_2:-79097803 | Msa0428240:CDS |
| GCGTGCTTGCTAATGTCTTC+AGG | 0.353904 | 3_2:+79098873 | None:intergenic |
| GGGTTGATTACAATGAGTTT+AGG | 0.355020 | 3_2:-79100319 | Msa0428240:CDS |
| GGACTTCTTCCGTCTGTGAT+TGG | 0.367551 | 3_2:-79098384 | Msa0428240:CDS |
| GCCTTGTGGTACTTCCAATT+AGG | 0.369977 | 3_2:-79097667 | Msa0428240:three_prime_UTR |
| CGCATCTAGCTGCTTAGTAT+TGG | 0.372282 | 3_2:-79097700 | Msa0428240:three_prime_UTR |
| TTGGTGTTGAATAATAAAAC+TGG | 0.373166 | 3_2:+79100927 | None:intergenic |
| GTATTCTTCCTGAAGAGCTT+TGG | 0.373610 | 3_2:-79100226 | Msa0428240:CDS |
| AGCTTTGGGATGCTCTTGAT+AGG | 0.382850 | 3_2:-79100211 | Msa0428240:CDS |
| TTTGTGAGGGTTCCAAGTTT+AGG | 0.385328 | 3_2:+79098447 | None:intergenic |
| GATGAAAATTACAACATAAC+TGG | 0.386592 | 3_2:+79100710 | None:intergenic |
| TTTCTTGGACATATCTTTCA+AGG | 0.392181 | 3_2:+79098320 | None:intergenic |
| TTTCTGCAGTGACGACAATA+TGG | 0.399931 | 3_2:-79098731 | Msa0428240:CDS |
| AACAGTTCCGATGCTTATAA+GGG | 0.400067 | 3_2:-79097916 | Msa0428240:CDS |
| TCTTTGATGGAGGGAATAAT+GGG | 0.407756 | 3_2:-79100451 | Msa0428240:CDS |
| AATTCGGATATTGGTGCTGC+TGG | 0.411872 | 3_2:-79098579 | Msa0428240:CDS |
| GATCACGTGCTTGAGGCATT+AGG | 0.419468 | 3_2:-79100521 | Msa0428240:CDS |
| ATATATGGATGATAAGGAAT+TGG | 0.420302 | 3_2:-79100294 | Msa0428240:CDS |
| ATCAACCCTACCATCACTAT+TGG | 0.422211 | 3_2:+79100334 | None:intergenic |
| TCTCAGTCCAACATCAGATC+TGG | 0.440276 | 3_2:-79100675 | Msa0428240:five_prime_UTR |
| CAATGCTGCAGGAATAGAAA+TGG | 0.442718 | 3_2:-79099072 | Msa0428240:CDS |
| GATCTAGTGAAATGTTTCTT+GGG | 0.443011 | 3_2:+79100540 | None:intergenic |
| ACATTAGCAAGCACGCTAAC+CGG | 0.449483 | 3_2:-79098866 | Msa0428240:CDS |
| GGTGGAAGGGCTCCTAAACT+TGG | 0.458284 | 3_2:-79098459 | Msa0428240:CDS |
| TGGGATGCTCTTGATAGGGC+TGG | 0.459417 | 3_2:-79100206 | Msa0428240:intron |
| TAGGAGATATATGGATGATA+AGG | 0.460917 | 3_2:-79100300 | Msa0428240:CDS |
| CTTGCATATTTATACTCCGC+TGG | 0.463043 | 3_2:+79100380 | None:intergenic |
| GATTATGTTCAGATAGAGAA+AGG | 0.470841 | 3_2:-79100422 | Msa0428240:CDS |
| CACGTTGACAAGGACAATAA+TGG | 0.472418 | 3_2:-79099020 | Msa0428240:CDS |
| TTGAAAATATATATCACCAT+TGG | 0.474683 | 3_2:-79098938 | Msa0428240:CDS |
| CTCCATCAAAGAAATTGAAA+AGG | 0.478589 | 3_2:+79100462 | None:intergenic |
| ATTGGAAGTACCACAAGGCC+AGG | 0.479626 | 3_2:+79097671 | None:intergenic |
| GCGAGATCAATGCCAGCATA+AGG | 0.481632 | 3_2:+79098354 | None:intergenic |
| TGAAAATATATATCACCATT+GGG | 0.482057 | 3_2:-79098937 | Msa0428240:CDS |
| TAGGTGAATCAAAAGAAGAA+AGG | 0.482226 | 3_2:-79100502 | Msa0428240:CDS |
| AAATATATTATTCATGATAG+TGG | 0.486766 | 3_2:-79098300 | Msa0428240:intron |
| TAAAACCAAATCAACACAAT+GGG | 0.488555 | 3_2:-79100587 | Msa0428240:exon |
| AGAGGAGCTTGCTCGCTTTG+TGG | 0.489148 | 3_2:-79099045 | Msa0428240:CDS |
| GGGACAATTTCTGGAACCCT+TGG | 0.491674 | 3_2:-79098128 | Msa0428240:CDS |
| CTATGGATCTTATCAAAACT+AGG | 0.493639 | 3_2:-79098503 | Msa0428240:CDS |
| CAACAATGCAAGATTTACTA+AGG | 0.494362 | 3_2:+79097607 | None:intergenic |
| CAAATTTCAAATGCTCAAAA+GGG | 0.494652 | 3_2:-79100626 | Msa0428240:five_prime_UTR |
| TCCTAGTTGTACTAGAGGAC+CGG | 0.496637 | 3_2:+79098154 | None:intergenic |
| CAGCGATAAAATATTTGCTC+CGG | 0.498497 | 3_2:+79098847 | None:intergenic |
| TAGATGCGTGTGGGGAAACC+AGG | 0.499485 | 3_2:+79097715 | None:intergenic |
| GCTTAGTATTGGCTTAGCCC+TGG | 0.502724 | 3_2:-79097689 | Msa0428240:three_prime_UTR |
| AGGTGAATCAAAAGAAGAAA+GGG | 0.504788 | 3_2:-79100501 | Msa0428240:CDS |
| ATGAGCAGTTTCAATGCTGC+AGG | 0.505089 | 3_2:-79099083 | Msa0428240:CDS |
| TTTATCGCTGGAGGAATAGC+AGG | 0.510692 | 3_2:-79098834 | Msa0428240:CDS |
| CACTGCAGGTTATTCGTACT+AGG | 0.514009 | 3_2:-79098088 | Msa0428240:intron |
| CTTGGTCTCCAATGTCTACA+TGG | 0.514430 | 3_2:+79098904 | None:intergenic |
| TTTATTTCCAGATCTGATGT+TGG | 0.516101 | 3_2:+79100668 | None:intergenic |
| ATTATGTTCAGATAGAGAAA+GGG | 0.519083 | 3_2:-79100421 | Msa0428240:CDS |
| AATCCATATATTCTTTGTGA+GGG | 0.521242 | 3_2:+79098434 | None:intergenic |
| ATTGGCATGATTCCTTATGC+TGG | 0.525188 | 3_2:-79098366 | Msa0428240:CDS |
| TACATGTGTCTATCCACTGC+AGG | 0.526699 | 3_2:-79098102 | Msa0428240:CDS |
| AGATGCTCAAGGTAACAATT+CGG | 0.534432 | 3_2:-79098595 | Msa0428240:CDS |
| TGTCTTCAGGAATGACAGCT+TGG | 0.536068 | 3_2:+79098886 | None:intergenic |
| CCTCTAGTACAACTAGGATG+TGG | 0.540484 | 3_2:-79098149 | Msa0428240:CDS |
| GCAGACCGCAATCTATCCTA+TGG | 0.541450 | 3_2:-79098520 | Msa0428240:CDS |
| GCTATTGATGTTGAACATAG+TGG | 0.542144 | 3_2:-79100251 | Msa0428240:CDS |
| AGGAGCCCTTCCACCTTCAG+AGG | 0.542507 | 3_2:+79098467 | None:intergenic |
| ATATAAGTAATGCTCGCAGC+TGG | 0.542695 | 3_2:+79097805 | None:intergenic |
| ATGGAAGCAAGATAATATAC+GGG | 0.544706 | 3_2:-79098712 | Msa0428240:CDS |
| GCTTTGGGATGCTCTTGATA+GGG | 0.545989 | 3_2:-79100210 | Msa0428240:CDS |
| GGCTTTAGAGGTTTCTACAA+AGG | 0.549054 | 3_2:-79097856 | Msa0428240:CDS |
| GTGATGCCAATAGTGATGGT+AGG | 0.551120 | 3_2:-79100340 | Msa0428240:CDS |
| AGGAATAGAAATGGATGAAG+AGG | 0.553086 | 3_2:-79099063 | Msa0428240:CDS |
| ATATTTGCCATATTGCCTAA+AGG | 0.554957 | 3_2:+79097553 | None:intergenic |
| CAACTTTGAGTAGATTTGGA+AGG | 0.557888 | 3_2:+79097830 | None:intergenic |
| TTGGCTTAGCCCTGGCCTTG+TGG | 0.558664 | 3_2:-79097681 | Msa0428240:three_prime_UTR |
| TGCACCTCTCGATCGTCTGA+AGG | 0.558903 | 3_2:-79098790 | Msa0428240:CDS |
| CTTGTGCCTCTGAAGGTGGA+AGG | 0.560242 | 3_2:-79098473 | Msa0428240:CDS |
| TAGTTCAGATAAGCATAATG+AGG | 0.562143 | 3_2:+79097472 | None:intergenic |
| AAATGTGATGTCAAATGTGA+AGG | 0.563503 | 3_2:+79100889 | None:intergenic |
| CCTAGTTGTACTAGAGGACC+GGG | 0.564027 | 3_2:+79098155 | None:intergenic |
| CAGACTTGTGCCTCTGAAGG+TGG | 0.565219 | 3_2:-79098477 | Msa0428240:CDS |
| AACATAACTGGTAATTGCGA+CGG | 0.565629 | 3_2:+79100722 | None:intergenic |
| CTACAGACTTGTGCCTCTGA+AGG | 0.568315 | 3_2:-79098480 | Msa0428240:CDS |
| TTAGCAGGTGGCGTGGCTGG+TGG | 0.570129 | 3_2:-79098549 | Msa0428240:CDS |
| CTAAGCAGCTAGATGCGTGT+GGG | 0.570130 | 3_2:+79097706 | None:intergenic |
| TTGTGCCTCTGAAGGTGGAA+GGG | 0.574169 | 3_2:-79098472 | Msa0428240:CDS |
| CCCGGTCCTCTAGTACAACT+AGG | 0.575820 | 3_2:-79098155 | Msa0428240:CDS |
| CTAGTACGAATAACCTGCAG+TGG | 0.576215 | 3_2:+79098089 | None:intergenic |
| AAATTGTGTTTCAAGAGTCA+CGG | 0.577612 | 3_2:+79097521 | None:intergenic |
| TTCACTAGATCACGTGCTTG+AGG | 0.578433 | 3_2:-79100528 | Msa0428240:CDS |
| ATTCGGATATTGGTGCTGCT+GGG | 0.584583 | 3_2:-79098578 | Msa0428240:CDS |
| AAACATTCCCTTATAAGCAT+CGG | 0.584700 | 3_2:+79097909 | None:intergenic |
| GAATCCATATATTCTTTGTG+AGG | 0.586586 | 3_2:+79098433 | None:intergenic |
| AAGAATATATGGATTCAAGA+AGG | 0.587277 | 3_2:-79098426 | Msa0428240:CDS |
| GAATGTTGTGAAGGTAGCAC+CGG | 0.587546 | 3_2:-79098667 | Msa0428240:CDS |
| CTTTGTGGAGCACGTTGACA+AGG | 0.587754 | 3_2:-79099030 | Msa0428240:CDS |
| TGATGCCAATAGTGATGGTA+GGG | 0.593762 | 3_2:-79100339 | Msa0428240:CDS |
| CAAATCAACACAATGGGTGG+TGG | 0.594305 | 3_2:-79100581 | Msa0428240:exon |
| TTTCAATAGTTGCTTCATGA+GGG | 0.596353 | 3_2:+79098955 | None:intergenic |
| GATAGACACATGTAGCTCCA+AGG | 0.598066 | 3_2:+79098111 | None:intergenic |
| CTCTAGTACAACTAGGATGT+GGG | 0.600264 | 3_2:-79098148 | Msa0428240:CDS |
| AATGTTAAAATACAGTGCTG+TGG | 0.600408 | 3_2:-79097412 | Msa0428240:three_prime_UTR |
| CGGATATTGGTGCTGCTGGG+AGG | 0.600630 | 3_2:-79098575 | Msa0428240:CDS |
| AATGTGATGTCAAATGTGAA+GGG | 0.601815 | 3_2:+79100890 | None:intergenic |
| AAAGTAATTGGAGATGCTCA+AGG | 0.602778 | 3_2:-79098606 | Msa0428240:CDS |
| AGAGTGTACCATGTAGACAT+TGG | 0.605955 | 3_2:-79098912 | Msa0428240:CDS |
| AACCAAATCAACACAATGGG+TGG | 0.607177 | 3_2:-79100584 | Msa0428240:exon |
| TAATGGATTGAATGTTGTGA+AGG | 0.610631 | 3_2:-79098676 | Msa0428240:CDS |
| CAACATTCAATCCATTACCT+CGG | 0.611488 | 3_2:+79098682 | None:intergenic |
| ATCTGCATTGCAAATTCCAG+CGG | 0.612606 | 3_2:-79100396 | Msa0428240:CDS |
| CCACATCCTAGTTGTACTAG+AGG | 0.616859 | 3_2:+79098149 | None:intergenic |
| TGTGTTTCAAGAGTCACGGA+AGG | 0.622908 | 3_2:+79097525 | None:intergenic |
| TTGGAAGTACCACAAGGCCA+GGG | 0.624233 | 3_2:+79097672 | None:intergenic |
| CATGGTACACTCTCTCCCAA+TGG | 0.626001 | 3_2:+79098922 | None:intergenic |
| GGAATCATGCCAATCACAGA+CGG | 0.632261 | 3_2:+79098375 | None:intergenic |
| ACTAAGCAGCTAGATGCGTG+TGG | 0.638285 | 3_2:+79097705 | None:intergenic |
| ATAGACACATGTAGCTCCAA+GGG | 0.639088 | 3_2:+79098112 | None:intergenic |
| TCACAGACGGAAGAAGTCCT+CGG | 0.639212 | 3_2:+79098388 | None:intergenic |
| TTAAAACCAAATCAACACAA+TGG | 0.640684 | 3_2:-79100588 | Msa0428240:exon |
| GTTTGTGATGCCAATAGTGA+TGG | 0.647265 | 3_2:-79100344 | Msa0428240:CDS |
| TAAGCAGCTAGATGCGTGTG+GGG | 0.652912 | 3_2:+79097707 | None:intergenic |
| ACGATCGAGAGGTGCAGTCG+CGG | 0.656594 | 3_2:+79098797 | None:intergenic |
| ATCACCTTCAGACGATCGAG+AGG | 0.659545 | 3_2:+79098786 | None:intergenic |
| GGACCTCGAGCTTTCTACCG+AGG | 0.662290 | 3_2:-79098405 | Msa0428240:CDS |
| TATCTATCTAGAAAATCACC+TGG | 0.664405 | 3_2:-79097733 | Msa0428240:three_prime_UTR |
| AAGATCCATAGGATAGATTG+CGG | 0.679419 | 3_2:+79098515 | None:intergenic |
| AGTCCTCGGTAGAAAGCTCG+AGG | 0.680432 | 3_2:+79098402 | None:intergenic |
| ACCTAATTGGAAGTACCACA+AGG | 0.708571 | 3_2:+79097666 | None:intergenic |
| TGGAAGCAAGATAATATACG+GGG | 0.738439 | 3_2:-79098711 | Msa0428240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTATACATAATAAATATA+GGG | + | chr3_2:79098625-79098644 | None:intergenic | 10.0% |
| !! | TACTTATACATAATAAATAT+AGG | + | chr3_2:79098626-79098645 | None:intergenic | 10.0% |
| !! | TATTTATTATGTATAAGTAT+AGG | - | chr3_2:79098627-79098646 | Msa0428240:CDS | 10.0% |
| !! | ATTTATTATGTATAAGTATA+GGG | - | chr3_2:79098628-79098647 | Msa0428240:CDS | 10.0% |
| !!! | TTTTATTTTGTTATGTTTTG+TGG | + | chr3_2:79097551-79097570 | None:intergenic | 15.0% |
| !!! | AGTATTTAATGATTTTTAAG+AGG | - | chr3_2:79098503-79098522 | Msa0428240:CDS | 15.0% |
| !! | TTATACATAATAAATATAGG+GGG | + | chr3_2:79098623-79098642 | None:intergenic | 15.0% |
| !! | CTTATACATAATAAATATAG+GGG | + | chr3_2:79098624-79098643 | None:intergenic | 15.0% |
| !! | TTTATTATGTATAAGTATAG+GGG | - | chr3_2:79098629-79098648 | Msa0428240:CDS | 15.0% |
| !! | GTATTTATTCAAAAATAGAA+AGG | - | chr3_2:79098715-79098734 | Msa0428240:CDS | 15.0% |
| !! | ATCATGAATAATATATTTCT+TGG | + | chr3_2:79100062-79100081 | None:intergenic | 15.0% |
| !! | AAATATATTATTCATGATAG+TGG | - | chr3_2:79100064-79100083 | Msa0428240:intron | 15.0% |
| !!! | GTTTTGTATTTGTTATTTTA+GGG | - | chr3_2:79100368-79100387 | Msa0428240:CDS | 15.0% |
| !!! | TGGTTATTTCTTACTATTTT+TGG | - | chr3_2:79098224-79098243 | Msa0428240:intron | 20.0% |
| !!! | ATTTTTGGTTAAGTTTGTTT+AGG | - | chr3_2:79098239-79098258 | Msa0428240:intron | 20.0% |
| !! | ACAATAAAACTTTCACAAAA+AGG | + | chr3_2:79099232-79099251 | None:intergenic | 20.0% |
| !! | TTGAAAATATATATCACCAT+TGG | - | chr3_2:79099426-79099445 | Msa0428240:intron | 20.0% |
| !! | TGAAAATATATATCACCATT+GGG | - | chr3_2:79099427-79099446 | Msa0428240:intron | 20.0% |
| !! | GAAATGTTGAAAAAAGTAAT+TGG | - | chr3_2:79099746-79099765 | Msa0428240:intron | 20.0% |
| !!! | GGTTTTGTATTTGTTATTTT+AGG | - | chr3_2:79100367-79100386 | Msa0428240:CDS | 20.0% |
| !!! | TTACATTTTAATCCTTTTTC+AGG | - | chr3_2:79100407-79100426 | Msa0428240:CDS | 20.0% |
| !! | AAGAAATAACTATACCTAAT+TGG | + | chr3_2:79100714-79100733 | None:intergenic | 20.0% |
| !! | AAGAAAATTATTACTCCTTT+AGG | - | chr3_2:79100796-79100815 | Msa0428240:five_prime_UTR | 20.0% |
| !!! | TTGGTGTTGAATAATAAAAC+TGG | + | chr3_2:79097440-79097459 | None:intergenic | 25.0% |
| ! | GATGAAAATTACAACATAAC+TGG | + | chr3_2:79097657-79097676 | None:intergenic | 25.0% |
| !!! | TTTTGAGCATTTGAAATTTG+AGG | + | chr3_2:79097738-79097757 | None:intergenic | 25.0% |
| ! | TCAAATTTCAAATGCTCAAA+AGG | - | chr3_2:79097737-79097756 | Msa0428240:three_prime_UTR | 25.0% |
| ! | CAAATTTCAAATGCTCAAAA+GGG | - | chr3_2:79097738-79097757 | Msa0428240:three_prime_UTR | 25.0% |
| ! | TTAAAACCAAATCAACACAA+TGG | - | chr3_2:79097776-79097795 | Msa0428240:CDS | 25.0% |
| ! | TAAAACCAAATCAACACAAT+GGG | - | chr3_2:79097777-79097796 | Msa0428240:CDS | 25.0% |
| !! | TTTTCAATTTCTTTGATGGA+GGG | - | chr3_2:79097904-79097923 | Msa0428240:CDS | 25.0% |
| ! | ATTATGTTCAGATAGAGAAA+GGG | - | chr3_2:79097943-79097962 | Msa0428240:intron | 25.0% |
| ! | ATATATGGATGATAAGGAAT+TGG | - | chr3_2:79098070-79098089 | Msa0428240:intron | 25.0% |
| ! | ACCAAAAAAGATTAAACTAG+AGG | + | chr3_2:79098208-79098227 | None:intergenic | 25.0% |
| !!! | TGTAGGTTGAGTTTTTTATT+AGG | - | chr3_2:79098275-79098294 | Msa0428240:intron | 25.0% |
| !!! | TAACTTTTCTACTTTAAGAC+TGG | + | chr3_2:79098344-79098363 | None:intergenic | 25.0% |
| !!! | TAATGATTTTTAAGAGGAGA+TGG | - | chr3_2:79098509-79098528 | Msa0428240:CDS | 25.0% |
| ! | TTCTCAACAAATAACTATGA+TGG | - | chr3_2:79098692-79098711 | Msa0428240:CDS | 25.0% |
| ! | TCTCAACAAATAACTATGAT+GGG | - | chr3_2:79098693-79098712 | Msa0428240:CDS | 25.0% |
| ! | GTAAATCAAGCTTGTAATAT+TGG | - | chr3_2:79098924-79098943 | Msa0428240:CDS | 25.0% |
| !! | CTTTTAGACTTATGTAGTTT+AGG | - | chr3_2:79098947-79098966 | Msa0428240:CDS | 25.0% |
| !! | CTTATGTAGTTTAGGATAAA+TGG | - | chr3_2:79098955-79098974 | Msa0428240:CDS | 25.0% |
| !! | AGTTTAGGATAAATGGAAAT+TGG | - | chr3_2:79098962-79098981 | Msa0428240:CDS | 25.0% |
| !! | TATATGCTTTGCCTTTTTAA+CGG | - | chr3_2:79099014-79099033 | Msa0428240:CDS | 25.0% |
| !! | AATGGAAAAGGTATAAACTT+GGG | + | chr3_2:79099109-79099128 | None:intergenic | 25.0% |
| ! | AACACAATATAGAATGGAAA+AGG | + | chr3_2:79099121-79099140 | None:intergenic | 25.0% |
| ! | GTAACAAACACAATATAGAA+TGG | + | chr3_2:79099127-79099146 | None:intergenic | 25.0% |
| !! | TTGTTACATCTTTGTTTGTT+TGG | - | chr3_2:79099140-79099159 | Msa0428240:intron | 25.0% |
| ! | TGCTTATGATAAATACTATC+AGG | + | chr3_2:79099262-79099281 | None:intergenic | 25.0% |
| ! | TATGGAAGCAAGATAATATA+CGG | - | chr3_2:79099651-79099670 | Msa0428240:intron | 25.0% |
| ! | AATCCATATATTCTTTGTGA+GGG | + | chr3_2:79099933-79099952 | None:intergenic | 25.0% |
| ! | AAGAATATATGGATTCAAGA+AGG | - | chr3_2:79099938-79099957 | Msa0428240:intron | 25.0% |
| !!! | TATTATTCATGATAGTGGTA+TGG | - | chr3_2:79100069-79100088 | Msa0428240:intron | 25.0% |
| !!! | GAAATAGTTTCACTTTTCAA+AGG | + | chr3_2:79100161-79100180 | None:intergenic | 25.0% |
| ! | ATGATTCTGATCATTTCATT+TGG | + | chr3_2:79100330-79100349 | None:intergenic | 25.0% |
| !! | AATTTTGTAGTCAGAAACAT+GGG | - | chr3_2:79100861-79100880 | Msa0428240:five_prime_UTR | 25.0% |
| AATGTGATGTCAAATGTGAA+GGG | + | chr3_2:79097477-79097496 | None:intergenic | 30.0% | |
| AAATGTGATGTCAAATGTGA+AGG | + | chr3_2:79097478-79097497 | None:intergenic | 30.0% | |
| ! | ATGTTTTGTGGTGTATCTTT+GGG | + | chr3_2:79097539-79097558 | None:intergenic | 30.0% |
| ! | TATGTTTTGTGGTGTATCTT+TGG | + | chr3_2:79097540-79097559 | None:intergenic | 30.0% |
| TTTATTTCCAGATCTGATGT+TGG | + | chr3_2:79097699-79097718 | None:intergenic | 30.0% | |
| GATCTAGTGAAATGTTTCTT+GGG | + | chr3_2:79097827-79097846 | None:intergenic | 30.0% | |
| TGATCTAGTGAAATGTTTCT+TGG | + | chr3_2:79097828-79097847 | None:intergenic | 30.0% | |
| TAGGTGAATCAAAAGAAGAA+AGG | - | chr3_2:79097862-79097881 | Msa0428240:CDS | 30.0% | |
| AGGTGAATCAAAAGAAGAAA+GGG | - | chr3_2:79097863-79097882 | Msa0428240:CDS | 30.0% | |
| ! | AGCCTTTTCAATTTCTTTGA+TGG | - | chr3_2:79097900-79097919 | Msa0428240:CDS | 30.0% |
| CTCCATCAAAGAAATTGAAA+AGG | + | chr3_2:79097905-79097924 | None:intergenic | 30.0% | |
| ! | CTTTTCAATTTCTTTGATGG+AGG | - | chr3_2:79097903-79097922 | Msa0428240:CDS | 30.0% |
| GATTATGTTCAGATAGAGAA+AGG | - | chr3_2:79097942-79097961 | Msa0428240:intron | 30.0% | |
| CAATGAGTTTAGGAGATATA+TGG | - | chr3_2:79098055-79098074 | Msa0428240:intron | 30.0% | |
| TAGGAGATATATGGATGATA+AGG | - | chr3_2:79098064-79098083 | Msa0428240:intron | 30.0% | |
| AAACTAGAGGCAAAACAAAA+AGG | + | chr3_2:79098195-79098214 | None:intergenic | 30.0% | |
| !!! | GCCTCTAGTTTAATCTTTTT+TGG | - | chr3_2:79098204-79098223 | Msa0428240:intron | 30.0% |
| ! | TTGGTTAAGTTTGTTTAGGA+AGG | - | chr3_2:79098243-79098262 | Msa0428240:intron | 30.0% |
| ! | TGGTTAAGTTTGTTTAGGAA+GGG | - | chr3_2:79098244-79098263 | Msa0428240:intron | 30.0% |
| GAAAAGCCAAAGTTTGAATT+CGG | - | chr3_2:79098406-79098425 | Msa0428240:CDS | 30.0% | |
| TGTCTTACACAGAATAGTAT+GGG | + | chr3_2:79098573-79098592 | None:intergenic | 30.0% | |
| TTGTCTTACACAGAATAGTA+TGG | + | chr3_2:79098574-79098593 | None:intergenic | 30.0% | |
| ACATAATAAATATAGGGGGA+GGG | + | chr3_2:79098619-79098638 | None:intergenic | 30.0% | |
| TACATAATAAATATAGGGGG+AGG | + | chr3_2:79098620-79098639 | None:intergenic | 30.0% | |
| TCCTTGCAATTATGTTTCAA+TGG | + | chr3_2:79098659-79098678 | None:intergenic | 30.0% | |
| ATTGAAACATAATTGCAAGG+AGG | - | chr3_2:79098658-79098677 | Msa0428240:CDS | 30.0% | |
| AGGTATGTTTAAATAGCACA+TGG | + | chr3_2:79098741-79098760 | None:intergenic | 30.0% | |
| GATAAATGGAAATTGGATTG+TGG | - | chr3_2:79098969-79098988 | Msa0428240:CDS | 30.0% | |
| TGTGGATTCTATTATTGTGA+AGG | - | chr3_2:79098987-79099006 | Msa0428240:CDS | 30.0% | |
| GTGGATTCTATTATTGTGAA+GGG | - | chr3_2:79098988-79099007 | Msa0428240:CDS | 30.0% | |
| ! | ATATGCTTTGCCTTTTTAAC+GGG | - | chr3_2:79099015-79099034 | Msa0428240:CDS | 30.0% |
| GTTAAAATGTCCCGTTAAAA+AGG | + | chr3_2:79099028-79099047 | None:intergenic | 30.0% | |
| ! | GAATGGAAAAGGTATAAACT+TGG | + | chr3_2:79099110-79099129 | None:intergenic | 30.0% |
| GTTATTGTGGATATTGAAGA+TGG | - | chr3_2:79099202-79099221 | Msa0428240:intron | 30.0% | |
| !! | GAACTATCACTTTTGAAGAA+TGG | - | chr3_2:79099366-79099385 | Msa0428240:intron | 30.0% |
| TTTCAATAGTTGCTTCATGA+GGG | + | chr3_2:79099412-79099431 | None:intergenic | 30.0% | |
| ! | TTTTCAATAGTTGCTTCATG+AGG | + | chr3_2:79099413-79099432 | None:intergenic | 30.0% |
| ATGGAAGCAAGATAATATAC+GGG | - | chr3_2:79099652-79099671 | Msa0428240:intron | 30.0% | |
| !! | TAATGGATTGAATGTTGTGA+AGG | - | chr3_2:79099688-79099707 | Msa0428240:intron | 30.0% |
| TAGAATTTGATTGCACTTTC+CGG | + | chr3_2:79099719-79099738 | None:intergenic | 30.0% | |
| !!! | CTAGTTTTGATAAGATCCAT+AGG | + | chr3_2:79099863-79099882 | None:intergenic | 30.0% |
| CTATGGATCTTATCAAAACT+AGG | - | chr3_2:79099861-79099880 | Msa0428240:intron | 30.0% | |
| GAATCCATATATTCTTTGTG+AGG | + | chr3_2:79099934-79099953 | None:intergenic | 30.0% | |
| TTTCTTGGACATATCTTTCA+AGG | + | chr3_2:79100047-79100066 | None:intergenic | 30.0% | |
| CTGATCATTTCATTTGGATA+AGG | + | chr3_2:79100324-79100343 | None:intergenic | 30.0% | |
| !! | TCATTTGTGTTTTTCAGAAC+TGG | - | chr3_2:79100346-79100365 | Msa0428240:CDS | 30.0% |
| AAACATTCCCTTATAAGCAT+CGG | + | chr3_2:79100458-79100477 | None:intergenic | 30.0% | |
| TATCTATCTAGAAAATCACC+TGG | - | chr3_2:79100631-79100650 | Msa0428240:five_prime_UTR | 30.0% | |
| CAACAATGCAAGATTTACTA+AGG | + | chr3_2:79100760-79100779 | None:intergenic | 30.0% | |
| TATTACTCCTTTAGGCAATA+TGG | - | chr3_2:79100804-79100823 | Msa0428240:five_prime_UTR | 30.0% | |
| ATATTTGCCATATTGCCTAA+AGG | + | chr3_2:79100814-79100833 | None:intergenic | 30.0% | |
| AAATTGTGTTTCAAGAGTCA+CGG | + | chr3_2:79100846-79100865 | None:intergenic | 30.0% | |
| ! | CAATTTTGTAGTCAGAAACA+TGG | - | chr3_2:79100860-79100879 | Msa0428240:five_prime_UTR | 30.0% |
| TAGTTCAGATAAGCATAATG+AGG | + | chr3_2:79100895-79100914 | None:intergenic | 30.0% | |
| AATGTTAAAATACAGTGCTG+TGG | - | chr3_2:79100952-79100971 | Msa0428240:five_prime_UTR | 30.0% | |
| AACATAACTGGTAATTGCGA+CGG | + | chr3_2:79097645-79097664 | None:intergenic | 35.0% | |
| TTCTTTGATGGAGGGAATAA+TGG | - | chr3_2:79097912-79097931 | Msa0428240:CDS | 35.0% | |
| TCTTTGATGGAGGGAATAAT+GGG | - | chr3_2:79097913-79097932 | Msa0428240:CDS | 35.0% | |
| ! | ATATGCAAGAGAGCTTTTCA+TGG | - | chr3_2:79097998-79098017 | Msa0428240:intron | 35.0% |
| ! | GGGTTGATTACAATGAGTTT+AGG | - | chr3_2:79098045-79098064 | Msa0428240:intron | 35.0% |
| GCTATTGATGTTGAACATAG+TGG | - | chr3_2:79098113-79098132 | Msa0428240:CDS | 35.0% | |
| TATTCTTCCTGAAGAGCTTT+GGG | - | chr3_2:79098139-79098158 | Msa0428240:CDS | 35.0% | |
| ! | TAGGAAGGGTTACTTTATGT+AGG | - | chr3_2:79098258-79098277 | Msa0428240:intron | 35.0% |
| !!! | TTACCCAAGTGTTTTTTCCA+CGG | + | chr3_2:79098480-79098499 | None:intergenic | 35.0% |
| ATTTAAGCACACCTCAAGAA+AGG | + | chr3_2:79098541-79098560 | None:intergenic | 35.0% | |
| CATAATAAATATAGGGGGAG+GGG | + | chr3_2:79098618-79098637 | None:intergenic | 35.0% | |
| GCCATTGAAACATAATTGCA+AGG | - | chr3_2:79098655-79098674 | Msa0428240:CDS | 35.0% | |
| TAAACATACCTTCTCACTAG+AGG | - | chr3_2:79098750-79098769 | Msa0428240:CDS | 35.0% | |
| GAATTGAAGAGTGAAGACAT+CGG | + | chr3_2:79098843-79098862 | None:intergenic | 35.0% | |
| TCACGGATAAATGTTACAAC+TGG | + | chr3_2:79099050-79099069 | None:intergenic | 35.0% | |
| CAGTTAGTCAACATTCTTCA+CGG | + | chr3_2:79099067-79099086 | None:intergenic | 35.0% | |
| ! | GAAAAGGTATAAACTTGGGA+AGG | + | chr3_2:79099105-79099124 | None:intergenic | 35.0% |
| AATATCCACAATAACTGCAG+TGG | + | chr3_2:79099197-79099216 | None:intergenic | 35.0% | |
| AGGAATAGAAATGGATGAAG+AGG | - | chr3_2:79099301-79099320 | Msa0428240:intron | 35.0% | |
| CAGCGATAAAATATTTGCTC+CGG | + | chr3_2:79099520-79099539 | None:intergenic | 35.0% | |
| ! | AGCAAATATTTTATCGCTGG+AGG | - | chr3_2:79099521-79099540 | Msa0428240:intron | 35.0% |
| TGGAAGCAAGATAATATACG+GGG | - | chr3_2:79099653-79099672 | Msa0428240:intron | 35.0% | |
| CAACATTCAATCCATTACCT+CGG | + | chr3_2:79099685-79099704 | None:intergenic | 35.0% | |
| AAAGTAATTGGAGATGCTCA+AGG | - | chr3_2:79099758-79099777 | Msa0428240:intron | 35.0% | |
| AGATGCTCAAGGTAACAATT+CGG | - | chr3_2:79099769-79099788 | Msa0428240:intron | 35.0% | |
| CAAGGTAACAATTCGGATAT+TGG | - | chr3_2:79099776-79099795 | Msa0428240:intron | 35.0% | |
| AAGATCCATAGGATAGATTG+CGG | + | chr3_2:79099852-79099871 | None:intergenic | 35.0% | |
| GAACCCTCACAAAGAATATA+TGG | - | chr3_2:79099927-79099946 | Msa0428240:intron | 35.0% | |
| !!! | TTAATCCTTTTTCAGGCTTC+AGG | - | chr3_2:79100414-79100433 | Msa0428240:CDS | 35.0% |
| AACAGTTCCGATGCTTATAA+GGG | - | chr3_2:79100448-79100467 | Msa0428240:CDS | 35.0% | |
| ! | TGTAGAACTTTTCAGCATGA+AGG | - | chr3_2:79100487-79100506 | Msa0428240:CDS | 35.0% |
| CAACTTTGAGTAGATTTGGA+AGG | + | chr3_2:79100537-79100556 | None:intergenic | 35.0% | |
| AACCAAATCAACACAATGGG+TGG | - | chr3_2:79097780-79097799 | Msa0428240:CDS | 40.0% | |
| ATCTGCATTGCAAATTCCAG+CGG | - | chr3_2:79097968-79097987 | Msa0428240:intron | 40.0% | |
| CTTGCATATTTATACTCCGC+TGG | + | chr3_2:79097987-79098006 | None:intergenic | 40.0% | |
| GTTTGTGATGCCAATAGTGA+TGG | - | chr3_2:79098020-79098039 | Msa0428240:intron | 40.0% | |
| TGATGCCAATAGTGATGGTA+GGG | - | chr3_2:79098025-79098044 | Msa0428240:intron | 40.0% | |
| ATCAACCCTACCATCACTAT+TGG | + | chr3_2:79098033-79098052 | None:intergenic | 40.0% | |
| GTATTCTTCCTGAAGAGCTT+TGG | - | chr3_2:79098138-79098157 | Msa0428240:CDS | 40.0% | |
| AACCAGCCGAATTCAAACTT+TGG | + | chr3_2:79098415-79098434 | None:intergenic | 40.0% | |
| TTCGTGTCAGACACTAAATG+TGG | + | chr3_2:79098445-79098464 | None:intergenic | 40.0% | |
| TTTAGTGTCTGACACGAACA+AGG | - | chr3_2:79098447-79098466 | Msa0428240:CDS | 40.0% | |
| !!! | TACCCAAGTGTTTTTTCCAC+GGG | + | chr3_2:79098479-79098498 | None:intergenic | 40.0% |
| CACTCTTCAATTCACTGATC+AGG | - | chr3_2:79098850-79098869 | Msa0428240:CDS | 40.0% | |
| CAATGCTGCAGGAATAGAAA+TGG | - | chr3_2:79099292-79099311 | Msa0428240:intron | 40.0% | |
| CACGTTGACAAGGACAATAA+TGG | - | chr3_2:79099344-79099363 | Msa0428240:intron | 40.0% | |
| AGAGTGTACCATGTAGACAT+TGG | - | chr3_2:79099452-79099471 | Msa0428240:intron | 40.0% | |
| ! | CGGAGCAAATATTTTATCGC+TGG | - | chr3_2:79099518-79099537 | Msa0428240:intron | 40.0% |
| TTTCTGCAGTGACGACAATA+TGG | - | chr3_2:79099633-79099652 | Msa0428240:intron | 40.0% | |
| ! | AATATACGGGGATTTTTCCG+AGG | - | chr3_2:79099665-79099684 | Msa0428240:intron | 40.0% |
| TTTGTGAGGGTTCCAAGTTT+AGG | + | chr3_2:79099920-79099939 | None:intergenic | 40.0% | |
| ATTGGCATGATTCCTTATGC+TGG | - | chr3_2:79099998-79100017 | Msa0428240:intron | 40.0% | |
| CTCTAGTACAACTAGGATGT+GGG | - | chr3_2:79100216-79100235 | Msa0428240:CDS | 40.0% | |
| ATAGACACATGTAGCTCCAA+GGG | + | chr3_2:79100255-79100274 | None:intergenic | 40.0% | |
| GAACAGTTCCGATGCTTATA+AGG | - | chr3_2:79100447-79100466 | Msa0428240:CDS | 40.0% | |
| ! | TTTCAGCATGAAGGCTTTAG+AGG | - | chr3_2:79100496-79100515 | Msa0428240:CDS | 40.0% |
| !! | GGCTTTAGAGGTTTCTACAA+AGG | - | chr3_2:79100508-79100527 | Msa0428240:CDS | 40.0% |
| GGCACAACTTTGAGTAGATT+TGG | + | chr3_2:79100541-79100560 | None:intergenic | 40.0% | |
| ATATAAGTAATGCTCGCAGC+TGG | + | chr3_2:79100562-79100581 | None:intergenic | 40.0% | |
| AGCTGCGAGCATTACTTATA+TGG | - | chr3_2:79100561-79100580 | Msa0428240:CDS | 40.0% | |
| !! | ACCTAATTGGAAGTACCACA+AGG | + | chr3_2:79100701-79100720 | None:intergenic | 40.0% |
| ! | AAGGGTGACTGACTGCATTT+TGG | + | chr3_2:79097459-79097478 | None:intergenic | 45.0% |
| TCTCAGTCCAACATCAGATC+TGG | - | chr3_2:79097689-79097708 | Msa0428240:three_prime_UTR | 45.0% | |
| !! | CACCACCCATTGTGTTGATT+TGG | + | chr3_2:79097785-79097804 | None:intergenic | 45.0% |
| CAAATCAACACAATGGGTGG+TGG | - | chr3_2:79097783-79097802 | Msa0428240:CDS | 45.0% | |
| TTCACTAGATCACGTGCTTG+AGG | - | chr3_2:79097836-79097855 | Msa0428240:CDS | 45.0% | |
| GTGATGCCAATAGTGATGGT+AGG | - | chr3_2:79098024-79098043 | Msa0428240:intron | 45.0% | |
| !! | AGCTTTGGGATGCTCTTGAT+AGG | - | chr3_2:79098153-79098172 | Msa0428240:CDS | 45.0% |
| !! | GCTTTGGGATGCTCTTGATA+GGG | - | chr3_2:79098154-79098173 | Msa0428240:CDS | 45.0% |
| AGCCAAAGTTTGAATTCGGC+TGG | - | chr3_2:79098410-79098429 | Msa0428240:CDS | 45.0% | |
| ! | AGTTTGAATTCGGCTGGTTG+AGG | - | chr3_2:79098416-79098435 | Msa0428240:CDS | 45.0% |
| CTCCCGTGGAAAAAACACTT+GGG | - | chr3_2:79098474-79098493 | Msa0428240:CDS | 45.0% | |
| !! | GATGGTTCTGACCTTTCTTG+AGG | - | chr3_2:79098527-79098546 | Msa0428240:CDS | 45.0% |
| ATAAATATAGGGGGAGGGGA+GGG | + | chr3_2:79098614-79098633 | None:intergenic | 45.0% | |
| AATAAATATAGGGGGAGGGG+AGG | + | chr3_2:79098615-79098634 | None:intergenic | 45.0% | |
| TCTGACCACTGCAGTTATTG+TGG | - | chr3_2:79099189-79099208 | Msa0428240:intron | 45.0% | |
| ATGAGCAGTTTCAATGCTGC+AGG | - | chr3_2:79099281-79099300 | Msa0428240:intron | 45.0% | |
| CTTGGTCTCCAATGTCTACA+TGG | + | chr3_2:79099463-79099482 | None:intergenic | 45.0% | |
| TGTCTTCAGGAATGACAGCT+TGG | + | chr3_2:79099481-79099500 | None:intergenic | 45.0% | |
| ACATTAGCAAGCACGCTAAC+CGG | - | chr3_2:79099498-79099517 | Msa0428240:intron | 45.0% | |
| TTTATCGCTGGAGGAATAGC+AGG | - | chr3_2:79099530-79099549 | Msa0428240:intron | 45.0% | |
| GAATGTTGTGAAGGTAGCAC+CGG | - | chr3_2:79099697-79099716 | Msa0428240:intron | 45.0% | |
| !! | AATTCGGATATTGGTGCTGC+TGG | - | chr3_2:79099785-79099804 | Msa0428240:intron | 45.0% |
| !! | ATTCGGATATTGGTGCTGCT+GGG | - | chr3_2:79099786-79099805 | Msa0428240:intron | 45.0% |
| GGAATCATGCCAATCACAGA+CGG | + | chr3_2:79099992-79100011 | None:intergenic | 45.0% | |
| TTTCCCTCCTTCATAGATCC+CGG | - | chr3_2:79100191-79100210 | Msa0428240:intron | 45.0% | |
| TCCTAGTTGTACTAGAGGAC+CGG | + | chr3_2:79100213-79100232 | None:intergenic | 45.0% | |
| CCACATCCTAGTTGTACTAG+AGG | + | chr3_2:79100218-79100237 | None:intergenic | 45.0% | |
| CCTCTAGTACAACTAGGATG+TGG | - | chr3_2:79100215-79100234 | Msa0428240:CDS | 45.0% | |
| CTAGGATGTGGGACAATTTC+TGG | - | chr3_2:79100227-79100246 | Msa0428240:CDS | 45.0% | |
| GATAGACACATGTAGCTCCA+AGG | + | chr3_2:79100256-79100275 | None:intergenic | 45.0% | |
| TACATGTGTCTATCCACTGC+AGG | - | chr3_2:79100262-79100281 | Msa0428240:CDS | 45.0% | |
| CTAGTACGAATAACCTGCAG+TGG | + | chr3_2:79100278-79100297 | None:intergenic | 45.0% | |
| CACTGCAGGTTATTCGTACT+AGG | - | chr3_2:79100276-79100295 | Msa0428240:CDS | 45.0% | |
| TTGTGCCTGAAGCCTGAAAA+AGG | + | chr3_2:79100422-79100441 | None:intergenic | 45.0% | |
| CGCATCTAGCTGCTTAGTAT+TGG | - | chr3_2:79100664-79100683 | Msa0428240:five_prime_UTR | 45.0% | |
| GCCTTGTGGTACTTCCAATT+AGG | - | chr3_2:79100697-79100716 | Msa0428240:five_prime_UTR | 45.0% | |
| TGTGTTTCAAGAGTCACGGA+AGG | + | chr3_2:79100842-79100861 | None:intergenic | 45.0% | |
| !! | TAATAACTTTAAATTAAAAA+GGG | + | chr3_2:79098788-79098807 | None:intergenic | 5.0% |
| !! | TTAATAACTTTAAATTAAAA+AGG | + | chr3_2:79098789-79098808 | None:intergenic | 5.0% |
| ! | GATCACGTGCTTGAGGCATT+AGG | - | chr3_2:79097843-79097862 | Msa0428240:CDS | 50.0% |
| ! | AGAGCATCCCAAAGCTCTTC+AGG | + | chr3_2:79098149-79098168 | None:intergenic | 50.0% |
| !!! | CCAAGTGTTTTTTCCACGGG+AGG | + | chr3_2:79098476-79098495 | None:intergenic | 50.0% |
| CCTCCCGTGGAAAAAACACT+TGG | - | chr3_2:79098473-79098492 | Msa0428240:CDS | 50.0% | |
| CGCATACACCTCTAGTGAGA+AGG | + | chr3_2:79098761-79098780 | None:intergenic | 50.0% | |
| CTTTGTGGAGCACGTTGACA+AGG | - | chr3_2:79099334-79099353 | Msa0428240:intron | 50.0% | |
| CATGGTACACTCTCTCCCAA+TGG | + | chr3_2:79099445-79099464 | None:intergenic | 50.0% | |
| ! | GCGTGCTTGCTAATGTCTTC+AGG | + | chr3_2:79099494-79099513 | None:intergenic | 50.0% |
| ATCACCTTCAGACGATCGAG+AGG | + | chr3_2:79099581-79099600 | None:intergenic | 50.0% | |
| ! | CGGGGATTTTTCCGAGGTAA+TGG | - | chr3_2:79099671-79099690 | Msa0428240:intron | 50.0% |
| GCAGACCGCAATCTATCCTA+TGG | - | chr3_2:79099844-79099863 | Msa0428240:intron | 50.0% | |
| CTACAGACTTGTGCCTCTGA+AGG | - | chr3_2:79099884-79099903 | Msa0428240:intron | 50.0% | |
| ! | TTGTGCCTCTGAAGGTGGAA+GGG | - | chr3_2:79099892-79099911 | Msa0428240:intron | 50.0% |
| TCACAGACGGAAGAAGTCCT+CGG | + | chr3_2:79099979-79099998 | None:intergenic | 50.0% | |
| GGACTTCTTCCGTCTGTGAT+TGG | - | chr3_2:79099980-79099999 | Msa0428240:intron | 50.0% | |
| GCGAGATCAATGCCAGCATA+AGG | + | chr3_2:79100013-79100032 | None:intergenic | 50.0% | |
| TAGAGGACCGGGATCTATGA+AGG | + | chr3_2:79100201-79100220 | None:intergenic | 50.0% | |
| CCTAGTTGTACTAGAGGACC+GGG | + | chr3_2:79100212-79100231 | None:intergenic | 50.0% | |
| !! | GGGACAATTTCTGGAACCCT+TGG | - | chr3_2:79100236-79100255 | Msa0428240:CDS | 50.0% |
| TAAGCAGCTAGATGCGTGTG+GGG | + | chr3_2:79100660-79100679 | None:intergenic | 50.0% | |
| CTAAGCAGCTAGATGCGTGT+GGG | + | chr3_2:79100661-79100680 | None:intergenic | 50.0% | |
| ACTAAGCAGCTAGATGCGTG+TGG | + | chr3_2:79100662-79100681 | None:intergenic | 50.0% | |
| !! | GCTTAGTATTGGCTTAGCCC+TGG | - | chr3_2:79100675-79100694 | Msa0428240:five_prime_UTR | 50.0% |
| !! | TTGGAAGTACCACAAGGCCA+GGG | + | chr3_2:79100695-79100714 | None:intergenic | 50.0% |
| !! | ATTGGAAGTACCACAAGGCC+AGG | + | chr3_2:79100696-79100715 | None:intergenic | 50.0% |
| TGGGATGCTCTTGATAGGGC+TGG | - | chr3_2:79098158-79098177 | Msa0428240:CDS | 55.0% | |
| ACGAACAAGGTTACCTCCCG+TGG | - | chr3_2:79098460-79098479 | Msa0428240:CDS | 55.0% | |
| ! | AGAGGAGCTTGCTCGCTTTG+TGG | - | chr3_2:79099319-79099338 | Msa0428240:intron | 55.0% |
| TGCACCTCTCGATCGTCTGA+AGG | - | chr3_2:79099574-79099593 | Msa0428240:intron | 55.0% | |
| ! | CAGACTTGTGCCTCTGAAGG+TGG | - | chr3_2:79099887-79099906 | Msa0428240:intron | 55.0% |
| ! | CTTGTGCCTCTGAAGGTGGA+AGG | - | chr3_2:79099891-79099910 | Msa0428240:intron | 55.0% |
| GGTGGAAGGGCTCCTAAACT+TGG | - | chr3_2:79099905-79099924 | Msa0428240:intron | 55.0% | |
| AGTCCTCGGTAGAAAGCTCG+AGG | + | chr3_2:79099965-79099984 | None:intergenic | 55.0% | |
| GGACCGGGATCTATGAAGGA+GGG | + | chr3_2:79100197-79100216 | None:intergenic | 55.0% | |
| AGGACCGGGATCTATGAAGG+AGG | + | chr3_2:79100198-79100217 | None:intergenic | 55.0% | |
| CCCGGTCCTCTAGTACAACT+AGG | - | chr3_2:79100209-79100228 | Msa0428240:CDS | 55.0% | |
| TAGATGCGTGTGGGGAAACC+AGG | + | chr3_2:79100652-79100671 | None:intergenic | 55.0% | |
| GGGAGGGGAGGGAAATTGAG+GGG | + | chr3_2:79098603-79098622 | None:intergenic | 60.0% | |
| GGGGAGGGGAGGGAAATTGA+GGG | + | chr3_2:79098604-79098623 | None:intergenic | 60.0% | |
| ! | ACGATCGAGAGGTGCAGTCG+CGG | + | chr3_2:79099570-79099589 | None:intergenic | 60.0% |
| !! | CGGATATTGGTGCTGCTGGG+AGG | - | chr3_2:79099789-79099808 | Msa0428240:intron | 60.0% |
| ! | GCTGCTGGGAGGCTTTTAGC+AGG | - | chr3_2:79099800-79099819 | Msa0428240:intron | 60.0% |
| ! | GCTGGGAGGCTTTTAGCAGG+TGG | - | chr3_2:79099803-79099822 | Msa0428240:intron | 60.0% |
| ! | GAGGCTTTTAGCAGGTGGCG+TGG | - | chr3_2:79099808-79099827 | Msa0428240:intron | 60.0% |
| ! | CTTTTAGCAGGTGGCGTGGC+TGG | - | chr3_2:79099812-79099831 | Msa0428240:intron | 60.0% |
| AGGAGCCCTTCCACCTTCAG+AGG | + | chr3_2:79099900-79099919 | None:intergenic | 60.0% | |
| GGACCTCGAGCTTTCTACCG+AGG | - | chr3_2:79099959-79099978 | Msa0428240:intron | 60.0% | |
| !! | TTGGCTTAGCCCTGGCCTTG+TGG | - | chr3_2:79100683-79100702 | Msa0428240:five_prime_UTR | 60.0% |
| GGGGGAGGGGAGGGAAATTG+AGG | + | chr3_2:79098605-79098624 | None:intergenic | 65.0% | |
| TTAGCAGGTGGCGTGGCTGG+TGG | - | chr3_2:79099815-79099834 | Msa0428240:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 79097406 | 79100980 | 79097406 | ID=Msa0428240;Name=Msa0428240 |
| chr3_2 | mRNA | 79097406 | 79100980 | 79097406 | ID=Msa0428240-mRNA-1;Parent=Msa0428240;Name=Msa0428240-mRNA-1;_AED=0.04;_eAED=0.04;_QI=389|0.66|0.75|1|1|1|4|359|495 |
| chr3_2 | exon | 79097406 | 79097957 | 79097406 | ID=Msa0428240-mRNA-1:exon:21256;Parent=Msa0428240-mRNA-1 |
| chr3_2 | exon | 79098089 | 79098179 | 79098089 | ID=Msa0428240-mRNA-1:exon:21255;Parent=Msa0428240-mRNA-1 |
| chr3_2 | exon | 79098301 | 79099119 | 79098301 | ID=Msa0428240-mRNA-1:exon:21254;Parent=Msa0428240-mRNA-1 |
| chr3_2 | exon | 79100207 | 79100980 | 79100207 | ID=Msa0428240-mRNA-1:exon:21253;Parent=Msa0428240-mRNA-1 |
| chr3_2 | five_prime_UTR | 79100592 | 79100980 | 79100592 | ID=Msa0428240-mRNA-1:five_prime_utr;Parent=Msa0428240-mRNA-1 |
| chr3_2 | CDS | 79100207 | 79100591 | 79100207 | ID=Msa0428240-mRNA-1:cds;Parent=Msa0428240-mRNA-1 |
| chr3_2 | CDS | 79098301 | 79099119 | 79098301 | ID=Msa0428240-mRNA-1:cds;Parent=Msa0428240-mRNA-1 |
| chr3_2 | CDS | 79098089 | 79098179 | 79098089 | ID=Msa0428240-mRNA-1:cds;Parent=Msa0428240-mRNA-1 |
| chr3_2 | CDS | 79097765 | 79097957 | 79097765 | ID=Msa0428240-mRNA-1:cds;Parent=Msa0428240-mRNA-1 |
| chr3_2 | three_prime_UTR | 79097406 | 79097764 | 79097406 | ID=Msa0428240-mRNA-1:three_prime_utr;Parent=Msa0428240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
