Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492550 | XP_039688242.1 | 64.088 | 181 | 63 | 2 | 1 | 179 | 6 | 186 | 3.69e-73 | 236 |
| Msa0492550 | XP_039688242.1 | 97.927 | 193 | 4 | 0 | 183 | 375 | 2 | 194 | 4.09e-135 | 394 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492550 | sp|Q9SS03|DIR21_ARATH | 48.077 | 156 | 77 | 1 | 33 | 184 | 32 | 187 | 3.26e-41 | 146 |
| Msa0492550 | sp|Q9SS03|DIR21_ARATH | 41.615 | 161 | 92 | 1 | 216 | 374 | 29 | 189 | 6.29e-40 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492550 | A0A396IMV9 | 64.088 | 181 | 63 | 2 | 1 | 179 | 6 | 186 | 1.76e-73 | 236 |
| Msa0492550 | A0A396IMV9 | 97.927 | 193 | 4 | 0 | 183 | 375 | 2 | 194 | 1.95e-135 | 394 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0445110 | Msa0492550 | 0.995986 | 4.341260e-222 | -8.615850e-47 |
| Msa0345330 | Msa0492550 | 0.889166 | 3.088252e-73 | -8.615850e-47 |
| Msa0345410 | Msa0492550 | 0.893287 | 7.234175e-75 | -8.615850e-47 |
| Msa0350620 | Msa0492550 | 0.869570 | 2.804090e-66 | -8.615850e-47 |
| Msa0492550 | Msa1269820 | 0.966349 | 8.409572e-126 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492550 | MtrunA17_Chr3g0085301 | 97.927 | 193 | 4 | 0 | 183 | 375 | 2 | 194 | 3.76e-139 | 394 |
| Msa0492550 | MtrunA17_Chr3g0085301 | 64.088 | 181 | 63 | 2 | 1 | 179 | 6 | 186 | 3.39e-77 | 236 |
| Msa0492550 | MtrunA17_Chr3g0085291 | 95.531 | 179 | 8 | 0 | 1 | 179 | 1 | 179 | 7.72e-124 | 354 |
| Msa0492550 | MtrunA17_Chr3g0085291 | 62.434 | 189 | 69 | 2 | 187 | 375 | 1 | 187 | 1.35e-79 | 242 |
| Msa0492550 | MtrunA17_Chr3g0085311 | 90.608 | 181 | 15 | 1 | 1 | 179 | 1 | 181 | 2.11e-116 | 336 |
| Msa0492550 | MtrunA17_Chr3g0085311 | 62.963 | 189 | 70 | 0 | 187 | 375 | 1 | 189 | 3.25e-82 | 249 |
| Msa0492550 | MtrunA17_Chr3g0085321 | 78.307 | 189 | 41 | 0 | 187 | 375 | 1 | 189 | 3.29e-106 | 310 |
| Msa0492550 | MtrunA17_Chr3g0085321 | 60.104 | 193 | 70 | 2 | 1 | 191 | 1 | 188 | 6.18e-76 | 233 |
| Msa0492550 | MtrunA17_Chr3g0090231 | 68.280 | 186 | 54 | 1 | 189 | 374 | 4 | 184 | 2.08e-90 | 270 |
| Msa0492550 | MtrunA17_Chr3g0090231 | 60.112 | 178 | 64 | 2 | 4 | 179 | 5 | 177 | 3.92e-69 | 215 |
| Msa0492550 | MtrunA17_Chr4g0040551 | 68.280 | 186 | 54 | 1 | 189 | 374 | 4 | 184 | 1.79e-89 | 267 |
| Msa0492550 | MtrunA17_Chr4g0040551 | 61.494 | 174 | 60 | 2 | 8 | 179 | 9 | 177 | 1.81e-70 | 219 |
| Msa0492550 | MtrunA17_Chr7g0259101 | 41.714 | 350 | 184 | 7 | 43 | 374 | 45 | 392 | 1.85e-77 | 244 |
| Msa0492550 | MtrunA17_Chr1g0177051 | 51.553 | 161 | 74 | 3 | 216 | 374 | 27 | 185 | 1.40e-45 | 154 |
| Msa0492550 | MtrunA17_Chr1g0177051 | 46.893 | 177 | 85 | 4 | 10 | 179 | 4 | 178 | 3.07e-45 | 154 |
| Msa0492550 | MtrunA17_Chr4g0005081 | 48.993 | 149 | 67 | 2 | 29 | 168 | 30 | 178 | 9.04e-44 | 150 |
| Msa0492550 | MtrunA17_Chr4g0005081 | 42.308 | 182 | 96 | 3 | 202 | 374 | 15 | 196 | 3.18e-38 | 135 |
| Msa0492550 | MtrunA17_Chr4g0005071 | 46.980 | 149 | 70 | 2 | 29 | 168 | 29 | 177 | 1.37e-41 | 144 |
| Msa0492550 | MtrunA17_Chr4g0005071 | 46.309 | 149 | 76 | 2 | 229 | 374 | 48 | 195 | 2.00e-35 | 128 |
| Msa0492550 | MtrunA17_Chr1g0175911 | 48.649 | 148 | 72 | 3 | 229 | 374 | 46 | 191 | 1.64e-40 | 141 |
| Msa0492550 | MtrunA17_Chr1g0175911 | 49.219 | 128 | 61 | 1 | 43 | 166 | 46 | 173 | 1.41e-37 | 134 |
| Msa0492550 | MtrunA17_Chr4g0005031 | 43.030 | 165 | 85 | 2 | 29 | 184 | 54 | 218 | 1.23e-39 | 140 |
| Msa0492550 | MtrunA17_Chr4g0005031 | 47.297 | 148 | 76 | 1 | 229 | 374 | 73 | 220 | 1.70e-37 | 134 |
| Msa0492550 | MtrunA17_Chr4g0005041 | 47.260 | 146 | 73 | 2 | 43 | 184 | 50 | 195 | 2.24e-38 | 136 |
| Msa0492550 | MtrunA17_Chr4g0005041 | 44.595 | 148 | 80 | 1 | 229 | 374 | 50 | 197 | 1.15e-35 | 129 |
| Msa0492550 | MtrunA17_Chr7g0243501 | 42.391 | 184 | 98 | 3 | 7 | 184 | 8 | 189 | 8.89e-38 | 134 |
| Msa0492550 | MtrunA17_Chr7g0243501 | 39.157 | 166 | 100 | 1 | 210 | 374 | 26 | 191 | 3.59e-34 | 125 |
| Msa0492550 | MtrunA17_Chr7g0259091 | 52.344 | 128 | 56 | 2 | 43 | 165 | 45 | 172 | 9.11e-38 | 134 |
| Msa0492550 | MtrunA17_Chr7g0259091 | 37.824 | 193 | 115 | 3 | 185 | 374 | 3 | 193 | 2.16e-35 | 128 |
| Msa0492550 | MtrunA17_Chr7g0259071 | 50.000 | 128 | 59 | 2 | 43 | 165 | 42 | 169 | 2.25e-37 | 133 |
| Msa0492550 | MtrunA17_Chr7g0259071 | 43.709 | 151 | 78 | 4 | 229 | 374 | 42 | 190 | 6.55e-32 | 119 |
| Msa0492550 | MtrunA17_Chr4g0037481 | 42.759 | 145 | 75 | 3 | 39 | 177 | 41 | 183 | 1.22e-35 | 129 |
| Msa0492550 | MtrunA17_Chr4g0037481 | 38.255 | 149 | 89 | 1 | 229 | 374 | 43 | 191 | 1.05e-29 | 113 |
| Msa0492550 | MtrunA17_Chr4g0005011 | 47.656 | 128 | 63 | 1 | 43 | 166 | 51 | 178 | 1.89e-35 | 128 |
| Msa0492550 | MtrunA17_Chr4g0005011 | 43.151 | 146 | 79 | 2 | 229 | 372 | 51 | 194 | 3.94e-33 | 122 |
| Msa0492550 | MtrunA17_Chr4g0005111 | 43.902 | 123 | 66 | 1 | 43 | 162 | 43 | 165 | 1.40e-33 | 123 |
| Msa0492550 | MtrunA17_Chr4g0005111 | 37.838 | 185 | 113 | 2 | 192 | 374 | 5 | 189 | 5.94e-33 | 122 |
| Msa0492550 | MtrunA17_Chr3g0136631 | 45.038 | 131 | 65 | 2 | 43 | 166 | 38 | 168 | 1.88e-30 | 115 |
| Msa0492550 | MtrunA17_Chr3g0136631 | 38.411 | 151 | 88 | 2 | 229 | 374 | 38 | 188 | 2.74e-27 | 106 |
| Msa0492550 | MtrunA17_Chr7g0259121 | 43.871 | 155 | 76 | 4 | 229 | 374 | 40 | 192 | 9.32e-30 | 114 |
| Msa0492550 | MtrunA17_Chr7g0259121 | 46.617 | 133 | 62 | 3 | 43 | 166 | 40 | 172 | 2.04e-29 | 113 |
| Msa0492550 | MtrunA17_Chr5g0446751 | 37.640 | 178 | 103 | 2 | 10 | 179 | 4 | 181 | 2.18e-29 | 112 |
| Msa0492550 | MtrunA17_Chr5g0446751 | 36.970 | 165 | 94 | 4 | 217 | 374 | 27 | 188 | 3.04e-26 | 103 |
| Msa0492550 | MtrunA17_Chr3g0136641 | 45.038 | 131 | 64 | 3 | 43 | 166 | 38 | 167 | 3.05e-29 | 112 |
| Msa0492550 | MtrunA17_Chr3g0136641 | 32.836 | 201 | 117 | 5 | 178 | 374 | 1 | 187 | 4.82e-24 | 97.8 |
| Msa0492550 | MtrunA17_Chr4g0005131 | 42.520 | 127 | 68 | 1 | 46 | 167 | 45 | 171 | 9.34e-29 | 110 |
| Msa0492550 | MtrunA17_Chr4g0005131 | 39.726 | 146 | 85 | 2 | 232 | 374 | 45 | 190 | 4.31e-28 | 108 |
| Msa0492550 | MtrunA17_Chr4g0068391 | 32.620 | 187 | 108 | 4 | 190 | 374 | 9 | 179 | 5.67e-22 | 92.0 |
| Msa0492550 | MtrunA17_Chr4g0068391 | 32.738 | 168 | 93 | 3 | 3 | 166 | 8 | 159 | 2.48e-18 | 82.0 |
| Msa0492550 | MtrunA17_Chr4g0024951 | 34.507 | 142 | 91 | 1 | 236 | 375 | 37 | 178 | 1.28e-21 | 90.9 |
| Msa0492550 | MtrunA17_Chr4g0024951 | 32.353 | 136 | 88 | 1 | 48 | 179 | 35 | 170 | 3.58e-16 | 75.9 |
| Msa0492550 | MtrunA17_Chr4g0024961 | 32.895 | 152 | 100 | 1 | 226 | 375 | 27 | 178 | 2.95e-21 | 90.1 |
| Msa0492550 | MtrunA17_Chr4g0024961 | 30.822 | 146 | 97 | 1 | 38 | 179 | 25 | 170 | 8.73e-17 | 77.4 |
| Msa0492550 | MtrunA17_Chr4g0005091 | 33.333 | 183 | 106 | 2 | 194 | 374 | 6 | 174 | 5.09e-21 | 89.4 |
| Msa0492550 | MtrunA17_Chr4g0005091 | 33.333 | 135 | 72 | 2 | 36 | 166 | 34 | 154 | 4.75e-15 | 72.8 |
| Msa0492550 | MtrunA17_Chr4g0068381 | 36.000 | 150 | 84 | 3 | 232 | 374 | 35 | 179 | 2.56e-19 | 84.7 |
| Msa0492550 | MtrunA17_Chr4g0068381 | 35.537 | 121 | 74 | 1 | 46 | 162 | 35 | 155 | 4.94e-17 | 78.2 |
| Msa0492550 | MtrunA17_Chr1g0169281 | 33.663 | 101 | 66 | 1 | 250 | 350 | 129 | 228 | 1.12e-11 | 64.7 |
| Msa0492550 | MtrunA17_Chr1g0169511 | 34.579 | 107 | 67 | 2 | 244 | 350 | 119 | 222 | 1.14e-11 | 64.3 |
| Msa0492550 | MtrunA17_Chr1g0169291 | 35.000 | 100 | 64 | 1 | 251 | 350 | 124 | 222 | 2.44e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492550 | AT1G65870.1 | 48.077 | 156 | 77 | 1 | 33 | 184 | 32 | 187 | 3.32e-42 | 146 |
| Msa0492550 | AT1G65870.1 | 41.615 | 161 | 92 | 1 | 216 | 374 | 29 | 189 | 6.39e-41 | 143 |
| Msa0492550 | AT5G42500.1 | 47.552 | 143 | 71 | 1 | 28 | 166 | 25 | 167 | 3.53e-42 | 146 |
| Msa0492550 | AT5G42500.1 | 42.581 | 155 | 85 | 3 | 222 | 374 | 33 | 185 | 2.89e-38 | 135 |
| Msa0492550 | AT1G22900.1 | 40.884 | 181 | 99 | 3 | 196 | 374 | 19 | 193 | 3.77e-42 | 146 |
| Msa0492550 | AT1G22900.1 | 45.455 | 143 | 74 | 1 | 28 | 166 | 33 | 175 | 4.31e-38 | 135 |
| Msa0492550 | AT5G42510.1 | 42.581 | 155 | 85 | 3 | 222 | 374 | 30 | 182 | 6.11e-38 | 135 |
| Msa0492550 | AT5G42510.1 | 46.429 | 140 | 71 | 2 | 31 | 166 | 25 | 164 | 1.07e-37 | 134 |
| Msa0492550 | AT2G21100.1 | 44.776 | 134 | 70 | 1 | 39 | 168 | 36 | 169 | 3.73e-37 | 133 |
| Msa0492550 | AT2G21100.1 | 40.260 | 154 | 88 | 2 | 224 | 374 | 35 | 187 | 2.29e-32 | 120 |
| Msa0492550 | AT2G21100.2 | 44.776 | 134 | 70 | 1 | 39 | 168 | 36 | 169 | 3.73e-37 | 133 |
| Msa0492550 | AT2G21100.2 | 40.260 | 154 | 88 | 2 | 224 | 374 | 35 | 187 | 2.29e-32 | 120 |
| Msa0492550 | AT1G55210.1 | 48.031 | 127 | 65 | 1 | 43 | 168 | 42 | 168 | 1.00e-34 | 126 |
| Msa0492550 | AT1G55210.1 | 40.816 | 147 | 79 | 3 | 229 | 368 | 42 | 187 | 2.56e-27 | 107 |
| Msa0492550 | AT1G55210.2 | 48.031 | 127 | 65 | 1 | 43 | 168 | 42 | 168 | 1.00e-34 | 126 |
| Msa0492550 | AT1G55210.2 | 40.816 | 147 | 79 | 3 | 229 | 368 | 42 | 187 | 2.56e-27 | 107 |
| Msa0492550 | AT3G13650.1 | 43.357 | 143 | 80 | 1 | 43 | 184 | 41 | 183 | 1.25e-34 | 126 |
| Msa0492550 | AT3G13650.1 | 36.986 | 146 | 91 | 1 | 229 | 374 | 41 | 185 | 2.27e-28 | 109 |
| Msa0492550 | AT5G49040.1 | 47.656 | 128 | 63 | 1 | 43 | 166 | 43 | 170 | 1.44e-34 | 126 |
| Msa0492550 | AT5G49040.1 | 41.406 | 128 | 73 | 1 | 229 | 354 | 43 | 170 | 1.86e-27 | 107 |
| Msa0492550 | AT1G58170.1 | 39.412 | 170 | 93 | 2 | 1 | 166 | 1 | 164 | 1.52e-34 | 126 |
| Msa0492550 | AT1G58170.1 | 36.757 | 185 | 109 | 3 | 192 | 374 | 6 | 184 | 1.88e-31 | 118 |
| Msa0492550 | AT5G49030.3 | 47.656 | 128 | 63 | 1 | 43 | 166 | 43 | 170 | 2.61e-31 | 126 |
| Msa0492550 | AT5G49030.3 | 41.406 | 128 | 73 | 1 | 229 | 354 | 43 | 170 | 5.69e-25 | 107 |
| Msa0492550 | AT3G13662.1 | 46.400 | 125 | 66 | 1 | 43 | 166 | 40 | 164 | 7.88e-31 | 115 |
| Msa0492550 | AT3G13662.1 | 41.270 | 126 | 73 | 1 | 229 | 354 | 40 | 164 | 6.62e-25 | 100 |
| Msa0492550 | AT3G58090.1 | 51.429 | 105 | 51 | 0 | 80 | 184 | 165 | 269 | 7.96e-28 | 110 |
| Msa0492550 | AT3G58090.1 | 45.794 | 107 | 58 | 0 | 268 | 374 | 165 | 271 | 9.62e-26 | 105 |
| Msa0492550 | AT4G38700.1 | 44.776 | 134 | 64 | 3 | 43 | 166 | 36 | 169 | 2.03e-27 | 107 |
| Msa0492550 | AT4G38700.1 | 37.662 | 154 | 88 | 3 | 229 | 374 | 36 | 189 | 1.56e-25 | 102 |
| Msa0492550 | AT2G21110.1 | 36.000 | 150 | 90 | 1 | 231 | 374 | 36 | 185 | 3.48e-25 | 101 |
| Msa0492550 | AT2G21110.1 | 31.111 | 180 | 103 | 3 | 9 | 179 | 11 | 178 | 5.49e-24 | 98.2 |
| Msa0492550 | AT3G13660.1 | 37.705 | 122 | 76 | 0 | 63 | 184 | 1 | 122 | 3.69e-22 | 91.3 |
| Msa0492550 | AT3G13660.1 | 38.462 | 117 | 72 | 0 | 258 | 374 | 8 | 124 | 2.70e-20 | 86.3 |
| Msa0492550 | AT4G11210.1 | 28.877 | 187 | 116 | 6 | 1 | 185 | 1 | 172 | 3.71e-15 | 73.6 |
| Msa0492550 | AT4G11210.1 | 28.022 | 182 | 121 | 6 | 194 | 372 | 5 | 179 | 5.47e-12 | 64.3 |
Find 67 sgRNAs with CRISPR-Local
Find 657 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTACTGCTAAGAGTGTT+TGG | 0.319714 | 3_4:+16349374 | Msa0492550:CDS |
| TTCTACTACCATGACATTAG+AGG | 0.326685 | 3_4:+16358220 | Msa0492550:CDS |
| CAAAATGTAGCTAATGGATT+TGG | 0.329364 | 3_4:+16358283 | Msa0492550:CDS |
| TTGGCGGCACCGGCGTGTTT+AGG | 0.334517 | 3_4:+16349338 | Msa0492550:CDS |
| TACTCAACAACATAATGTTC+AGG | 0.352386 | 3_4:-16358595 | None:intergenic |
| ACGTCTATTGTTGGTGGAAC+TGG | 0.364219 | 3_4:+16358514 | Msa0492550:CDS |
| TCAGTGCTTTGTTGATTTGT+TGG | 0.368171 | 3_4:-16348998 | None:intergenic |
| CTGCCTATTGTTGGCGGCAC+CGG | 0.371881 | 3_4:+16349328 | Msa0492550:CDS |
| CCATCAAATACAGTTGGGTT+TGG | 0.383222 | 3_4:+16349097 | Msa0492550:CDS |
| CCGGCGTGTTTAGGTTTGCT+AGG | 0.384387 | 3_4:+16349347 | Msa0492550:CDS |
| TAATGTCATGGTAGTAGAAA+TGG | 0.395728 | 3_4:-16358216 | None:intergenic |
| AGCTCAAGGGATGTTTGGTT+TGG | 0.396536 | 3_4:+16349186 | Msa0492550:CDS |
| ACGCCGGTGCCGCCAACAAT+AGG | 0.397084 | 3_4:-16349331 | None:intergenic |
| CCAAACCCAACTGTATTTGA+TGG | 0.400788 | 3_4:-16349097 | None:intergenic |
| GGAAGAGCTCAAGGGATGTT+TGG | 0.401132 | 3_4:+16358367 | Msa0492550:CDS |
| ACACCACAAAATGTAGCTAA+TGG | 0.410009 | 3_4:+16358277 | Msa0492550:CDS |
| TCTCTAACCGTGTCTTGAAC+AGG | 0.414606 | 3_4:-16349304 | None:intergenic |
| TGCTACTGCTAAGAGTGTTT+GGG | 0.423437 | 3_4:+16349375 | Msa0492550:CDS |
| GCTCTTGTCCTTCAGTTAAG+AGG | 0.424118 | 3_4:-16349141 | None:intergenic |
| CTTCTCTATAGTTTGTTGTT+CGG | 0.426647 | 3_4:-16358182 | None:intergenic |
| GGTAGAGCTCAAGGGATGTT+TGG | 0.428431 | 3_4:+16349181 | Msa0492550:CDS |
| TTTAATGAAGGGAAATATGC+TGG | 0.436425 | 3_4:+16358439 | Msa0492550:CDS |
| ATAATGTTCAGGGGTAGAAA+TGG | 0.442235 | 3_4:-16358584 | None:intergenic |
| GGAAGCACTCTTAGTATGTT+GGG | 0.448120 | 3_4:+16358460 | Msa0492550:CDS |
| CGGCGTGTTTAGGTTTGCTA+GGG | 0.449156 | 3_4:+16349348 | Msa0492550:CDS |
| CTCTATAGTTTGTTGTTCGG+AGG | 0.455137 | 3_4:-16358179 | None:intergenic |
| TCAATAATTTGTACAACCGT+TGG | 0.456883 | 3_4:-16349073 | None:intergenic |
| GGTAGTACTCTTAGTATGCT+TGG | 0.469670 | 3_4:+16349274 | Msa0492550:CDS |
| TAACATGATGTTGAATTGTT+CGG | 0.474733 | 3_4:-16348975 | None:intergenic |
| GTTAGAGAACTGCCTATTGT+TGG | 0.476698 | 3_4:+16349319 | Msa0492550:CDS |
| ATTAATCTTGCTTTCACCGA+TGG | 0.478192 | 3_4:+16349241 | Msa0492550:CDS |
| AGAGTGTATGATGATAAATA+TGG | 0.480301 | 3_4:+16358414 | Msa0492550:CDS |
| ATTGATCCATCAAATACAGT+TGG | 0.481548 | 3_4:+16349091 | Msa0492550:CDS |
| TTGATCCATCAAATACAGTT+GGG | 0.483436 | 3_4:+16349092 | Msa0492550:CDS |
| AATAGAGAAACGTCTATTGT+TGG | 0.491021 | 3_4:+16358505 | Msa0492550:CDS |
| TGGAAGCACTCTTAGTATGT+TGG | 0.496447 | 3_4:+16358459 | Msa0492550:CDS |
| AAACCTGTCGGTAGAGCTCA+AGG | 0.523725 | 3_4:+16349172 | Msa0492550:CDS |
| CAATGATTTGTAACATGGTG+GGG | 0.525613 | 3_4:-16358252 | None:intergenic |
| GTTTGGAGCAAGTTACATGA+TGG | 0.529133 | 3_4:+16349114 | Msa0492550:CDS |
| ACTCAACAACATAATGTTCA+GGG | 0.541128 | 3_4:-16358594 | None:intergenic |
| AGAGAACTGCCTATTGTTGG+CGG | 0.541168 | 3_4:+16349322 | Msa0492550:CDS |
| AAACACATTGGAAGAGCTCA+AGG | 0.544060 | 3_4:+16358358 | Msa0492550:CDS |
| ATCCCTTGAGCTCTACCGAC+AGG | 0.544812 | 3_4:-16349175 | None:intergenic |
| GTACTCTTAGTATGCTTGGA+AGG | 0.545035 | 3_4:+16349278 | Msa0492550:CDS |
| TCTATAGTTTGTTGTTCGGA+GGG | 0.557097 | 3_4:-16358178 | None:intergenic |
| TCAATGATTTGTAACATGGT+GGG | 0.580239 | 3_4:-16358253 | None:intergenic |
| TTGTTCGGAGAACACTCCAT+TGG | 0.582295 | 3_4:-16348960 | None:intergenic |
| AGAGAAACGTCTATTGTTGG+TGG | 0.583087 | 3_4:+16358508 | Msa0492550:CDS |
| ATGGACAACCTCTTAACTGA+AGG | 0.591801 | 3_4:+16349133 | Msa0492550:CDS |
| TTGGCATCTTTGCATGATCG+TGG | 0.594187 | 3_4:+16349205 | Msa0492550:CDS |
| ATCTTTGCATGATCGTGGAA+TGG | 0.599273 | 3_4:+16349210 | Msa0492550:CDS |
| GTCAATGATTTGTAACATGG+TGG | 0.600362 | 3_4:-16358254 | None:intergenic |
| GCACTCTTAGTATGTTGGGA+AGG | 0.604095 | 3_4:+16358464 | Msa0492550:CDS |
| GAATTAAGTTCAAAACACAT+TGG | 0.623480 | 3_4:+16358346 | Msa0492550:CDS |
| GAGCTAACATCAAAACCTGT+CGG | 0.634037 | 3_4:+16349160 | Msa0492550:CDS |
| TTGAGTGGAAATGAGTGTGA+GGG | 0.637117 | 3_4:-16358107 | None:intergenic |
| CTCAACAACATAATGTTCAG+GGG | 0.650457 | 3_4:-16358593 | None:intergenic |
| GTTGAGTGGAAATGAGTGTG+AGG | 0.650989 | 3_4:-16358108 | None:intergenic |
| ATTTGTGGTTGTTAGTTGAG+TGG | 0.655245 | 3_4:-16358122 | None:intergenic |
| ATGGATGATGCAATGACTGA+AGG | 0.670753 | 3_4:+16358319 | Msa0492550:CDS |
| GGCGTGTTTAGGTTTGCTAG+GGG | 0.673525 | 3_4:+16349349 | Msa0492550:CDS |
| AAGGAATCCTGTTCAAGACA+CGG | 0.674439 | 3_4:+16349297 | Msa0492550:CDS |
| AACACATTGGAAGAGCTCAA+GGG | 0.674782 | 3_4:+16358359 | Msa0492550:CDS |
| TGTGTCAATGATTTGTAACA+TGG | 0.675813 | 3_4:-16358257 | None:intergenic |
| ACTACCAGCAAAATCACCAT+CGG | 0.683340 | 3_4:-16349257 | None:intergenic |
| AACCTGTCGGTAGAGCTCAA+GGG | 0.694023 | 3_4:+16349173 | Msa0492550:CDS |
| CCTAGCAAACCTAAACACGC+CGG | 0.714305 | 3_4:-16349347 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAATTAATTTTTAT+TGG | + | chr3_4:16350323-16350342 | Msa0492550:intron | 0.0% |
| !!! | TTATTTTTATTTTTTATATA+AGG | + | chr3_4:16351380-16351399 | Msa0492550:intron | 0.0% |
| !! | AGATAACATATTAAATTTAT+TGG | + | chr3_4:16351153-16351172 | Msa0492550:intron | 10.0% |
| !!! | TGTTGATTTTTTATTTTTTA+AGG | - | chr3_4:16353978-16353997 | None:intergenic | 10.0% |
| !!! | TATTATAATGCATATTTTTA+TGG | + | chr3_4:16354491-16354510 | Msa0492550:intron | 10.0% |
| !!! | TTTTAGATATTCTTATTTTT+GGG | + | chr3_4:16355082-16355101 | Msa0492550:intron | 10.0% |
| !!! | AACTGAATTTGTTTTTATTT+TGG | - | chr3_4:16349627-16349646 | None:intergenic | 15.0% |
| !!! | TATTCTAATCACATTAATTT+TGG | + | chr3_4:16350125-16350144 | Msa0492550:intron | 15.0% |
| !! | AGAAATATTGTATTGAAAAA+TGG | - | chr3_4:16350401-16350420 | None:intergenic | 15.0% |
| !!! | AATTTTGTTACCTATAATAA+TGG | + | chr3_4:16350839-16350858 | Msa0492550:intron | 15.0% |
| !!! | TATAGAATTTTAACTATTCA+TGG | - | chr3_4:16350867-16350886 | None:intergenic | 15.0% |
| !!! | ATCAATTTTGTAATGAAAAA+AGG | + | chr3_4:16351352-16351371 | Msa0492550:intron | 15.0% |
| !! | GTTATGATAAGATAATTTAT+AGG | - | chr3_4:16351861-16351880 | None:intergenic | 15.0% |
| !! | TACAAAAAAACTTAAATGAT+AGG | + | chr3_4:16352895-16352914 | Msa0492550:intron | 15.0% |
| !!! | TTGTAGTAAATTAGTTTTTT+AGG | - | chr3_4:16353305-16353324 | None:intergenic | 15.0% |
| !! | TTATGCTAAATAATACAAAA+AGG | - | chr3_4:16353374-16353393 | None:intergenic | 15.0% |
| !!! | TCAAAATTTTCAATAATGTA+TGG | - | chr3_4:16353769-16353788 | None:intergenic | 15.0% |
| !!! | AAAAATTTTCTCAAAGAAAA+TGG | + | chr3_4:16354419-16354438 | Msa0492550:intron | 15.0% |
| !!! | ATTTTTTTTTCTATATACCT+TGG | + | chr3_4:16354544-16354563 | Msa0492550:intron | 15.0% |
| !!! | ATTGTTTACAATTGTTATTT+CGG | - | chr3_4:16354787-16354806 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTGACTAATAAAT+CGG | - | chr3_4:16354978-16354997 | None:intergenic | 15.0% |
| !! | CAAAAATAAGAATATCTAAA+AGG | - | chr3_4:16355083-16355102 | None:intergenic | 15.0% |
| !!! | CTTTTAGATATTCTTATTTT+TGG | + | chr3_4:16355081-16355100 | Msa0492550:intron | 15.0% |
| !!! | AAAAAAATAGAACTTTTTTG+AGG | + | chr3_4:16357942-16357961 | Msa0492550:intron | 15.0% |
| !!! | ATAAATATGGTTTTTAATGA+AGG | + | chr3_4:16358427-16358446 | Msa0492550:CDS | 15.0% |
| !!! | TAAATATGGTTTTTAATGAA+GGG | + | chr3_4:16358428-16358447 | Msa0492550:CDS | 15.0% |
| !!! | AACATATTATGTACCTTTTA+GGG | + | chr3_4:16349527-16349546 | Msa0492550:intron | 20.0% |
| !! | AATGTTATAGAGAAAAAACT+AGG | - | chr3_4:16349826-16349845 | None:intergenic | 20.0% |
| !! | TGAATTGAGAATAACAATTA+AGG | - | chr3_4:16350470-16350489 | None:intergenic | 20.0% |
| !!! | TGTCGTTTTAGTATTTTTAA+GGG | + | chr3_4:16350653-16350672 | Msa0492550:intron | 20.0% |
| !! | GCAATAAAATAGGAATATAT+TGG | + | chr3_4:16351191-16351210 | Msa0492550:intron | 20.0% |
| !! | ATAAAATAGGAATATATTGG+TGG | + | chr3_4:16351194-16351213 | Msa0492550:intron | 20.0% |
| !!! | GATTAAAATGAAGGTATAAT+AGG | + | chr3_4:16351216-16351235 | Msa0492550:intron | 20.0% |
| !!! | AAAAATACACTTCACTATTT+TGG | + | chr3_4:16351251-16351270 | Msa0492550:intron | 20.0% |
| !!! | ATAGACTTTAGTTTTCTATT+GGG | - | chr3_4:16351461-16351480 | None:intergenic | 20.0% |
| !!! | AATAGACTTTAGTTTTCTAT+TGG | - | chr3_4:16351462-16351481 | None:intergenic | 20.0% |
| !! | AAATTAAGGCAATAAGTTTA+TGG | + | chr3_4:16351793-16351812 | Msa0492550:intron | 20.0% |
| !! | ATTATCTTATCATAACAAGT+TGG | + | chr3_4:16351865-16351884 | Msa0492550:intron | 20.0% |
| !! | ATAAGAAACTATGAAAAACT+AGG | - | chr3_4:16353155-16353174 | None:intergenic | 20.0% |
| !!! | CTTATAATTTTGTTAGTGAT+AGG | + | chr3_4:16353170-16353189 | Msa0492550:intron | 20.0% |
| !!! | ATATTTACAGAGATTTTTCA+AGG | - | chr3_4:16353907-16353926 | None:intergenic | 20.0% |
| !! | TTGAAAAATCTCTGTAAATA+TGG | + | chr3_4:16353906-16353925 | Msa0492550:intron | 20.0% |
| !! | ACACAAATATTATTTCCAAA+AGG | + | chr3_4:16353995-16354014 | Msa0492550:intron | 20.0% |
| !! | CACAAATATTATTTCCAAAA+GGG | + | chr3_4:16353996-16354015 | Msa0492550:intron | 20.0% |
| !!! | TAACACTTTTTATGCTTTTA+AGG | - | chr3_4:16354102-16354121 | None:intergenic | 20.0% |
| !!! | ATGATTATGCAATGTTTTAT+GGG | - | chr3_4:16354214-16354233 | None:intergenic | 20.0% |
| !!! | AAGTTATATTCGTAGATTTT+CGG | + | chr3_4:16354311-16354330 | Msa0492550:intron | 20.0% |
| !! | AGTAAACTTGTAACAAATAT+AGG | - | chr3_4:16354362-16354381 | None:intergenic | 20.0% |
| !! | GTTATTCCTAGAAATAAATT+TGG | + | chr3_4:16354599-16354618 | Msa0492550:intron | 20.0% |
| !!! | AGTTTACCAAATTTATTTCT+AGG | - | chr3_4:16354608-16354627 | None:intergenic | 20.0% |
| !!! | CTAATGTGATCAATTTATTT+TGG | - | chr3_4:16354761-16354780 | None:intergenic | 20.0% |
| !!! | TTAAGAAATTAAGAGAGTAT+AGG | - | chr3_4:16354920-16354939 | None:intergenic | 20.0% |
| !! | AATAAGAATATCTAAAAGGT+TGG | - | chr3_4:16355079-16355098 | None:intergenic | 20.0% |
| !!! | CAGTTATTTCAAAAATCAAA+TGG | + | chr3_4:16355481-16355500 | Msa0492550:intron | 20.0% |
| !!! | TTTGAACTCTTTTATAGTAA+AGG | - | chr3_4:16355578-16355597 | None:intergenic | 20.0% |
| !! | TATGATCAACTATATATACT+AGG | + | chr3_4:16356012-16356031 | Msa0492550:intron | 20.0% |
| !! | GGAATATTTATGTGATATTA+AGG | + | chr3_4:16356033-16356052 | Msa0492550:intron | 20.0% |
| !!! | TAGGTTTGTTTTTTGTTAAT+TGG | + | chr3_4:16356138-16356157 | Msa0492550:intron | 20.0% |
| !!! | ATTATTTTCCTAAAAGAGTT+CGG | + | chr3_4:16357075-16357094 | Msa0492550:intron | 20.0% |
| !! | AAAATAGAAAACACATTTGT+CGG | - | chr3_4:16357266-16357285 | None:intergenic | 20.0% |
| !! | CATAAACAAAATTTATTCTG+AGG | + | chr3_4:16358025-16358044 | Msa0492550:intron | 20.0% |
| ! | TAACATGATGTTGAATTGTT+CGG | - | chr3_4:16348978-16348997 | None:intergenic | 25.0% |
| !! | ATGGTAAAAAAAGTGCAAAT+GGG | - | chr3_4:16349032-16349051 | None:intergenic | 25.0% |
| !! | GAACATATTATGTACCTTTT+AGG | + | chr3_4:16349526-16349545 | Msa0492550:intron | 25.0% |
| !!! | TGTTTTATTTGAGTTTGTGT+TGG | + | chr3_4:16349587-16349606 | Msa0492550:intron | 25.0% |
| !! | CTATAACATTTTCTTCGATT+AGG | + | chr3_4:16349836-16349855 | Msa0492550:intron | 25.0% |
| ! | CAATAACGCTAAAAATATAG+AGG | - | chr3_4:16350222-16350241 | None:intergenic | 25.0% |
| ! | TACTAAAACGACAGTTAAAT+CGG | - | chr3_4:16350646-16350665 | None:intergenic | 25.0% |
| !!! | CTGTCGTTTTAGTATTTTTA+AGG | + | chr3_4:16350652-16350671 | Msa0492550:intron | 25.0% |
| ! | AGATAAGAGTAATTGACAAA+GGG | - | chr3_4:16350697-16350716 | None:intergenic | 25.0% |
| ! | AAGATAAGAGTAATTGACAA+AGG | - | chr3_4:16350698-16350717 | None:intergenic | 25.0% |
| ! | ATTCATGGAACCATTATTAT+AGG | - | chr3_4:16350852-16350871 | None:intergenic | 25.0% |
| ! | ATACTCCATAAATGTTCAAA+AGG | + | chr3_4:16350962-16350981 | Msa0492550:intron | 25.0% |
| !! | TTCTTCCTTTTGAACATTTA+TGG | - | chr3_4:16350970-16350989 | None:intergenic | 25.0% |
| !!! | ATATTGGTGGATTAAAATGA+AGG | + | chr3_4:16351207-16351226 | Msa0492550:intron | 25.0% |
| ! | AAACGACACTTGAAAAAAAA+CGG | + | chr3_4:16351287-16351306 | Msa0492550:intron | 25.0% |
| ! | ATCATGTTGTATATGATCTT+CGG | - | chr3_4:16351732-16351751 | None:intergenic | 25.0% |
| ! | TATTAGCTAAATTACACTAG+AGG | + | chr3_4:16351834-16351853 | Msa0492550:intron | 25.0% |
| !!! | TAAGTTTTTTTGTACCACTT+AGG | - | chr3_4:16352889-16352908 | None:intergenic | 25.0% |
| ! | AAACTTAAATGATAGGATCA+TGG | + | chr3_4:16352902-16352921 | Msa0492550:intron | 25.0% |
| !! | TTGATAGTATTGTTATTGTG+CGG | + | chr3_4:16352964-16352983 | Msa0492550:intron | 25.0% |
| !! | TTTTCTTCATTCCTTTCTAA+CGG | - | chr3_4:16353042-16353061 | None:intergenic | 25.0% |
| ! | ATGATTGTTTATTTGAGTGA+TGG | - | chr3_4:16353819-16353838 | None:intergenic | 25.0% |
| !! | TCATATTTTCTCTGTAAATG+TGG | + | chr3_4:16353835-16353854 | Msa0492550:intron | 25.0% |
| !!! | GTTTTTCCTTTTTTTGGAAA+GGG | - | chr3_4:16354191-16354210 | None:intergenic | 25.0% |
| !! | TGATTATGCAATGTTTTATG+GGG | - | chr3_4:16354213-16354232 | None:intergenic | 25.0% |
| !! | GATGATTATGCAATGTTTTA+TGG | - | chr3_4:16354215-16354234 | None:intergenic | 25.0% |
| ! | TCATTACAAGAAATAGAACA+TGG | + | chr3_4:16354236-16354255 | Msa0492550:intron | 25.0% |
| !! | AGTTATATTCGTAGATTTTC+GGG | + | chr3_4:16354312-16354331 | Msa0492550:intron | 25.0% |
| !! | GAGAAAATTTTTATATTCCC+AGG | - | chr3_4:16354411-16354430 | None:intergenic | 25.0% |
| !! | AATTTTCTCAAAGAAAATGG+TGG | + | chr3_4:16354422-16354441 | Msa0492550:intron | 25.0% |
| !! | ATTTTCTCAAAGAAAATGGT+GGG | + | chr3_4:16354423-16354442 | Msa0492550:intron | 25.0% |
| ! | GAAATTATTCTCATCTTCAT+GGG | - | chr3_4:16354458-16354477 | None:intergenic | 25.0% |
| ! | TGAAATTATTCTCATCTTCA+TGG | - | chr3_4:16354459-16354478 | None:intergenic | 25.0% |
| !!! | ATGCATATTTTTATGGTTTC+TGG | + | chr3_4:16354498-16354517 | Msa0492550:intron | 25.0% |
| !!! | TGCATATTTTTATGGTTTCT+GGG | + | chr3_4:16354499-16354518 | Msa0492550:intron | 25.0% |
| !! | AAGATGAGAATTTTATTCCA+AGG | - | chr3_4:16354564-16354583 | None:intergenic | 25.0% |
| !!! | ATTTATTTTGGTGTCTGAAT+CGG | - | chr3_4:16354749-16354768 | None:intergenic | 25.0% |
| ! | ACAATTAACCAAAACTTAGT+TGG | + | chr3_4:16354802-16354821 | Msa0492550:intron | 25.0% |
| !!! | AAAACATTTTGGTTTAGAGA+TGG | + | chr3_4:16355321-16355340 | Msa0492550:intron | 25.0% |
| !!! | AAACATTTTGGTTTAGAGAT+GGG | + | chr3_4:16355322-16355341 | Msa0492550:intron | 25.0% |
| ! | CATGGAAAAATTTCGTATTA+AGG | - | chr3_4:16355350-16355369 | None:intergenic | 25.0% |
| !! | TAATACGAAATTTTTCCATG+CGG | + | chr3_4:16355350-16355369 | Msa0492550:intron | 25.0% |
| ! | GAATAGAATTGAAGATTTAG+AGG | + | chr3_4:16355394-16355413 | Msa0492550:intron | 25.0% |
| ! | CAAATTAATAACATTGGCAT+GGG | - | chr3_4:16355509-16355528 | None:intergenic | 25.0% |
| ! | AGGAACCAAATTAATAACAT+TGG | - | chr3_4:16355515-16355534 | None:intergenic | 25.0% |
| ! | GTCATGAATTATATCAAGAA+GGG | + | chr3_4:16355662-16355681 | Msa0492550:intron | 25.0% |
| ! | AATATTACACTTATCCCTAA+AGG | + | chr3_4:16355733-16355752 | Msa0492550:intron | 25.0% |
| ! | CATATAATGAATGATCTCAA+TGG | - | chr3_4:16355932-16355951 | None:intergenic | 25.0% |
| ! | TGAGATCATTCATTATATGA+AGG | + | chr3_4:16355933-16355952 | Msa0492550:intron | 25.0% |
| ! | ATGTGATATTAAGGTTCAAA+TGG | + | chr3_4:16356042-16356061 | Msa0492550:intron | 25.0% |
| ! | TGTGATATTAAGGTTCAAAT+GGG | + | chr3_4:16356043-16356062 | Msa0492550:intron | 25.0% |
| !! | AATTGTCAAAGTGTCTATTA+GGG | + | chr3_4:16356549-16356568 | Msa0492550:intron | 25.0% |
| ! | AAGTTTGTAATTGTGATATG+TGG | - | chr3_4:16356767-16356786 | None:intergenic | 25.0% |
| ! | TATCACAATTACAAACTTGA+TGG | + | chr3_4:16356769-16356788 | Msa0492550:intron | 25.0% |
| !! | CATTTTTAATACTCCACTAT+TGG | + | chr3_4:16356858-16356877 | Msa0492550:intron | 25.0% |
| ! | TTGGAACAATATCATTGAAT+CGG | + | chr3_4:16357364-16357383 | Msa0492550:intron | 25.0% |
| ! | ATTTAGTAACCTTTGATGTT+AGG | + | chr3_4:16357823-16357842 | Msa0492550:intron | 25.0% |
| ! | ACTAATTAACCTAACATCAA+AGG | - | chr3_4:16357835-16357854 | None:intergenic | 25.0% |
| ! | GAGAGCAATGTTATATATAT+AGG | - | chr3_4:16357991-16358010 | None:intergenic | 25.0% |
| !! | AACAAAATTTATTCTGAGGA+AGG | + | chr3_4:16358029-16358048 | Msa0492550:intron | 25.0% |
| !!! | ATTTGGTTCAACTTTTATGA+TGG | + | chr3_4:16358300-16358319 | Msa0492550:CDS | 25.0% |
| !!! | ATGTGTTTTGAACTTAATTC+TGG | - | chr3_4:16358346-16358365 | None:intergenic | 25.0% |
| ! | GAATTAAGTTCAAAACACAT+TGG | + | chr3_4:16358346-16358365 | Msa0492550:CDS | 25.0% |
| ! | AGAGTGTATGATGATAAATA+TGG | + | chr3_4:16358414-16358433 | Msa0492550:CDS | 25.0% |
| !!! | TCTCTATTTTGTTTGGTAAT+AGG | - | chr3_4:16358493-16358512 | None:intergenic | 25.0% |
| !!! | GTATTTTTAGATTTGCTAGA+GGG | + | chr3_4:16358536-16358555 | Msa0492550:CDS | 25.0% |
| ! | CATGGTAAAAAAAGTGCAAA+TGG | - | chr3_4:16349033-16349052 | None:intergenic | 30.0% |
| ! | TTTTACCATGACATCTTAGA+AGG | + | chr3_4:16349043-16349062 | Msa0492550:CDS | 30.0% |
| !!! | TTTTACCTTCTAAGATGTCA+TGG | - | chr3_4:16349051-16349070 | None:intergenic | 30.0% |
| CTTAGAAGGTAAAAATCCAA+CGG | + | chr3_4:16349057-16349076 | Msa0492550:CDS | 30.0% | |
| ! | TCAATAATTTGTACAACCGT+TGG | - | chr3_4:16349076-16349095 | None:intergenic | 30.0% |
| ATTGATCCATCAAATACAGT+TGG | + | chr3_4:16349091-16349110 | Msa0492550:CDS | 30.0% | |
| TTGATCCATCAAATACAGTT+GGG | + | chr3_4:16349092-16349111 | Msa0492550:CDS | 30.0% | |
| !!! | ACCTTTTAGGGTTTTGATTT+CGG | + | chr3_4:16349539-16349558 | Msa0492550:intron | 30.0% |
| !!! | TTATTTTGGTATTAGCCTAG+TGG | - | chr3_4:16349613-16349632 | None:intergenic | 30.0% |
| TTCATTGCTCAAAATGTTGA+GGG | - | chr3_4:16349651-16349670 | None:intergenic | 30.0% | |
| GTTATAGAGAAAAAACTAGG+CGG | - | chr3_4:16349823-16349842 | None:intergenic | 30.0% | |
| ! | TAACATTTTCTTCGATTAGG+AGG | + | chr3_4:16349839-16349858 | Msa0492550:intron | 30.0% |
| !!! | TATTTCTAGACATTTTGTCG+TGG | + | chr3_4:16350153-16350172 | Msa0492550:intron | 30.0% |
| GTCGTGGTATTCTAATAATT+TGG | + | chr3_4:16350169-16350188 | Msa0492550:intron | 30.0% | |
| TGGTGAAAAGTGATGAATTA+AGG | - | chr3_4:16350381-16350400 | None:intergenic | 30.0% | |
| !! | GAAATGCTAAAAAGTGTCTT+TGG | - | chr3_4:16350448-16350467 | None:intergenic | 30.0% |
| AAGAAACTTGTATGAATGCA+TGG | + | chr3_4:16350508-16350527 | Msa0492550:intron | 30.0% | |
| GAAAGACACTTAAAAAGGAA+CGG | - | chr3_4:16350604-16350623 | None:intergenic | 30.0% | |
| CACTAGAAAGACACTTAAAA+AGG | - | chr3_4:16350609-16350628 | None:intergenic | 30.0% | |
| !! | TTTTAAGTGTCTTTCTAGTG+CGG | + | chr3_4:16350609-16350628 | Msa0492550:intron | 30.0% |
| ! | GAAAGTGTGTGCAATAAAAT+AGG | + | chr3_4:16351181-16351200 | Msa0492550:intron | 30.0% |
| ! | GAGGGAGTAATTTTTAAACT+TGG | + | chr3_4:16351309-16351328 | Msa0492550:intron | 30.0% |
| TTTATATAAGGCCAAGAGAA+AGG | + | chr3_4:16351392-16351411 | Msa0492550:intron | 30.0% | |
| TATTGGGTGTCAATCTAATT+GGG | - | chr3_4:16351445-16351464 | None:intergenic | 30.0% | |
| ! | TAAAGAGCTTTTCTTGAACT+GGG | - | chr3_4:16351554-16351573 | None:intergenic | 30.0% |
| AATTGTACATCTGTTGTCAA+AGG | + | chr3_4:16351590-16351609 | Msa0492550:intron | 30.0% | |
| TTATGTGTCAAAAGTCTTCT+TGG | - | chr3_4:16351647-16351666 | None:intergenic | 30.0% | |
| GAAGGCTTATAAGAATTGTT+AGG | + | chr3_4:16352094-16352113 | Msa0492550:intron | 30.0% | |
| AAGATGCATCTTGTTGATAT+GGG | - | chr3_4:16352125-16352144 | None:intergenic | 30.0% | |
| ! | AACAAGATGCATCTTCTTTT+CGG | + | chr3_4:16352130-16352149 | Msa0492550:intron | 30.0% |
| GAAGGCTTATAAGAATTGTT+AGG | + | chr3_4:16352094-16352113 | Msa0492550:intron | 30.0% | |
| AAGATGCATCTTGTTGATAT+GGG | - | chr3_4:16352125-16352144 | None:intergenic | 30.0% | |
| ! | AACAAGATGCATCTTCTTTT+CGG | + | chr3_4:16352130-16352149 | Msa0492550:intron | 30.0% |
| !! | TATAGGTTGATGCATACATA+AGG | - | chr3_4:16353007-16353026 | None:intergenic | 30.0% |
| AACGGATACAATGCTTATAT+AGG | - | chr3_4:16353024-16353043 | None:intergenic | 30.0% | |
| CAAGTTGCTTCTTTAATGAT+AGG | - | chr3_4:16353205-16353224 | None:intergenic | 30.0% | |
| ! | TTAACCTGTCTGAAATAAAG+TGG | - | chr3_4:16353708-16353727 | None:intergenic | 30.0% |
| ! | AGTTATCCAACTTTGTTTGT+AGG | + | chr3_4:16353728-16353747 | Msa0492550:intron | 30.0% |
| ! | GTTATCCAACTTTGTTTGTA+GGG | + | chr3_4:16353729-16353748 | Msa0492550:intron | 30.0% |
| ! | TATAGAAAAATTTGTTCCCG+AGG | - | chr3_4:16353862-16353881 | None:intergenic | 30.0% |
| TATAGAAAAAATTGTTCCCG+AGG | - | chr3_4:16353933-16353952 | None:intergenic | 30.0% | |
| !! | TCCAAAAGGGTAATTTTAAC+CGG | + | chr3_4:16354009-16354028 | Msa0492550:intron | 30.0% |
| !!! | GGTTTTTCCTTTTTTTGGAA+AGG | - | chr3_4:16354192-16354211 | None:intergenic | 30.0% |
| ! | TATGGGGTTTTTCCTTTTTT+TGG | - | chr3_4:16354197-16354216 | None:intergenic | 30.0% |
| ATTCTCATCTTTATGTTCCA+AGG | + | chr3_4:16354573-16354592 | Msa0492550:intron | 30.0% | |
| ! | TTTCTAGGAATAACATTCCT+TGG | - | chr3_4:16354593-16354612 | None:intergenic | 30.0% |
| ! | ATCCAAAGCACATTGATTAA+AGG | - | chr3_4:16354644-16354663 | None:intergenic | 30.0% |
| ! | TTTAGAGACCAACTAAGTTT+TGG | - | chr3_4:16354813-16354832 | None:intergenic | 30.0% |
| ! | AACTTAGTTGGTCTCTAAAT+CGG | + | chr3_4:16354814-16354833 | Msa0492550:intron | 30.0% |
| ! | AGAAATTAAGAGAGTATAGG+CGG | - | chr3_4:16354917-16354936 | None:intergenic | 30.0% |
| ! | TTTTGTGACTAATAAATCGG+TGG | - | chr3_4:16354975-16354994 | None:intergenic | 30.0% |
| TGATGTAGAGACTGAAAATT+TGG | + | chr3_4:16355145-16355164 | Msa0492550:intron | 30.0% | |
| CTGAAAATTTGGTCTCTAAA+AGG | + | chr3_4:16355156-16355175 | Msa0492550:intron | 30.0% | |
| ! | AACAGAGAGCAAAAACATTT+TGG | + | chr3_4:16355310-16355329 | Msa0492550:intron | 30.0% |
| !!! | AACATTTTGGTTTAGAGATG+GGG | + | chr3_4:16355323-16355342 | Msa0492550:intron | 30.0% |
| AGAATTGAAGATTTAGAGGA+TGG | + | chr3_4:16355398-16355417 | Msa0492550:intron | 30.0% | |
| CCAAATTAATAACATTGGCA+TGG | - | chr3_4:16355510-16355529 | None:intergenic | 30.0% | |
| CCATGCCAATGTTATTAATT+TGG | + | chr3_4:16355507-16355526 | Msa0492550:intron | 30.0% | |
| GGTCATGAATTATATCAAGA+AGG | + | chr3_4:16355661-16355680 | Msa0492550:intron | 30.0% | |
| TTGATAGATTTGACATGAGT+CGG | - | chr3_4:16355715-16355734 | None:intergenic | 30.0% | |
| TATATGAAGGCAAAAGCTAA+AGG | + | chr3_4:16355946-16355965 | Msa0492550:intron | 30.0% | |
| ATATGAAGGCAAAAGCTAAA+GGG | + | chr3_4:16355947-16355966 | Msa0492550:intron | 30.0% | |
| ATTCAGTCTTCGTTAATGTT+AGG | + | chr3_4:16356119-16356138 | Msa0492550:intron | 30.0% | |
| ! | GATAAGATGTATTGACATGT+TGG | + | chr3_4:16356199-16356218 | Msa0492550:intron | 30.0% |
| ATGTTACAACATCACACTTA+AGG | - | chr3_4:16356379-16356398 | None:intergenic | 30.0% | |
| GTGTGATGTTGTAACATTTA+AGG | + | chr3_4:16356382-16356401 | Msa0492550:intron | 30.0% | |
| AATAGACACTTTGACAATTG+CGG | - | chr3_4:16356548-16356567 | None:intergenic | 30.0% | |
| ! | CAATTGTCAAAGTGTCTATT+AGG | + | chr3_4:16356548-16356567 | Msa0492550:intron | 30.0% |
| TTGGATCAAGTAGTAGTATA+TGG | + | chr3_4:16356609-16356628 | Msa0492550:intron | 30.0% | |
| ! | TGGAGTATTAAAAATGCTTC+TGG | - | chr3_4:16356854-16356873 | None:intergenic | 30.0% |
| ATTAATGATGTGTGTATACC+TGG | + | chr3_4:16356889-16356908 | Msa0492550:intron | 30.0% | |
| GGACATTATGAATCATGATT+TGG | + | chr3_4:16356956-16356975 | Msa0492550:intron | 30.0% | |
| AAGAAATTCTTAACCTTTGG+TGG | - | chr3_4:16357038-16357057 | None:intergenic | 30.0% | |
| CACAAGAAATTCTTAACCTT+TGG | - | chr3_4:16357041-16357060 | None:intergenic | 30.0% | |
| CAAAGGTTAAGAATTTCTTG+TGG | + | chr3_4:16357039-16357058 | Msa0492550:intron | 30.0% | |
| AAAACTATATGTGAACGTGA+AGG | + | chr3_4:16357389-16357408 | Msa0492550:intron | 30.0% | |
| AGTACGATTTCGAATATGTT+GGG | - | chr3_4:16357441-16357460 | None:intergenic | 30.0% | |
| TAGTACGATTTCGAATATGT+TGG | - | chr3_4:16357442-16357461 | None:intergenic | 30.0% | |
| ATATTCGAAATCGTACTACT+AGG | + | chr3_4:16357444-16357463 | Msa0492550:intron | 30.0% | |
| GACATTACATTTATACCTGT+TGG | - | chr3_4:16357513-16357532 | None:intergenic | 30.0% | |
| ! | TTTTTCCCATTCATTGAATC+AGG | + | chr3_4:16357541-16357560 | Msa0492550:intron | 30.0% |
| TTTGTGCTGGATAAAACTAA+TGG | + | chr3_4:16357602-16357621 | Msa0492550:intron | 30.0% | |
| GTTTATTATCAGCTCTTCAT+TGG | + | chr3_4:16357665-16357684 | Msa0492550:intron | 30.0% | |
| TGAGTTTGATTCCAAAATTG+TGG | + | chr3_4:16357720-16357739 | Msa0492550:intron | 30.0% | |
| ! | TATACTATCCACCACAATTT+TGG | - | chr3_4:16357734-16357753 | None:intergenic | 30.0% |
| !! | ATTGTGGTGGATAGTATATA+TGG | + | chr3_4:16357736-16357755 | Msa0492550:intron | 30.0% |
| !! | TTTTGAGAAATCTGCATTTG+TGG | - | chr3_4:16358140-16358159 | None:intergenic | 30.0% |
| !! | CTTCTCTATAGTTTGTTGTT+CGG | - | chr3_4:16358185-16358204 | None:intergenic | 30.0% |
| TAATGTCATGGTAGTAGAAA+TGG | - | chr3_4:16358219-16358238 | None:intergenic | 30.0% | |
| ! | TCAATGATTTGTAACATGGT+GGG | - | chr3_4:16358256-16358275 | None:intergenic | 30.0% |
| ! | TGTGTCAATGATTTGTAACA+TGG | - | chr3_4:16358260-16358279 | None:intergenic | 30.0% |
| ! | AATCCATTAGCTACATTTTG+TGG | - | chr3_4:16358283-16358302 | None:intergenic | 30.0% |
| !! | CAAAATGTAGCTAATGGATT+TGG | + | chr3_4:16358283-16358302 | Msa0492550:CDS | 30.0% |
| TTTAATGAAGGGAAATATGC+TGG | + | chr3_4:16358439-16358458 | Msa0492550:CDS | 30.0% | |
| ! | AGACGTTTCTCTATTTTGTT+TGG | - | chr3_4:16358500-16358519 | None:intergenic | 30.0% |
| AATAGAGAAACGTCTATTGT+TGG | + | chr3_4:16358505-16358524 | Msa0492550:CDS | 30.0% | |
| !!! | GGTATTTTTAGATTTGCTAG+AGG | + | chr3_4:16358535-16358554 | Msa0492550:CDS | 30.0% |
| ACTCAACAACATAATGTTCA+GGG | - | chr3_4:16358597-16358616 | None:intergenic | 30.0% | |
| TACTCAACAACATAATGTTC+AGG | - | chr3_4:16358598-16358617 | None:intergenic | 30.0% | |
| ! | GCTCAATTTTTCACTACCAA+TGG | + | chr3_4:16348944-16348963 | Msa0492550:CDS | 35.0% |
| !! | TCAGTGCTTTGTTGATTTGT+TGG | - | chr3_4:16349001-16349020 | None:intergenic | 35.0% |
| ATTAATCTTGCTTTCACCGA+TGG | + | chr3_4:16349241-16349260 | Msa0492550:CDS | 35.0% | |
| AAGAACTTGCAAGAGTTCTA+TGG | - | chr3_4:16349454-16349473 | None:intergenic | 35.0% | |
| TGTTCTCAAAACAAACCACT+AGG | - | chr3_4:16349511-16349530 | None:intergenic | 35.0% | |
| !!! | CCTTTTAGGGTTTTGATTTC+GGG | + | chr3_4:16349540-16349559 | Msa0492550:intron | 35.0% |
| CTTCATTGCTCAAAATGTTG+AGG | - | chr3_4:16349652-16349671 | None:intergenic | 35.0% | |
| !! | TCTTTGGAGCATTGAATAAG+TGG | - | chr3_4:16350432-16350451 | None:intergenic | 35.0% |
| AGAAAGAGTTGAAGACTCAT+TGG | + | chr3_4:16350986-16351005 | Msa0492550:intron | 35.0% | |
| GACACTTGAAAAAAAACGGA+GGG | + | chr3_4:16351291-16351310 | Msa0492550:intron | 35.0% | |
| CTATTGGGTGTCAATCTAAT+TGG | - | chr3_4:16351446-16351465 | None:intergenic | 35.0% | |
| CTATCATAAACAGCAACACA+TGG | + | chr3_4:16351494-16351513 | Msa0492550:intron | 35.0% | |
| AACACATGGACGTTAATGTA+TGG | + | chr3_4:16351508-16351527 | Msa0492550:intron | 35.0% | |
| ! | AAAGAGCTTTTCTTGAACTG+GGG | - | chr3_4:16351553-16351572 | None:intergenic | 35.0% |
| ! | CTAAAGAGCTTTTCTTGAAC+TGG | - | chr3_4:16351555-16351574 | None:intergenic | 35.0% |
| TGTACAATTGCAAGTGTATG+CGG | - | chr3_4:16351579-16351598 | None:intergenic | 35.0% | |
| TGTCAAAAGTCTTCTTGGTA+AGG | - | chr3_4:16351642-16351661 | None:intergenic | 35.0% | |
| ATCAAACACTTGTCGAATCT+CGG | + | chr3_4:16351674-16351693 | Msa0492550:intron | 35.0% | |
| ! | GGTGTTACAAAACACATAAG+TGG | - | chr3_4:16351911-16351930 | None:intergenic | 35.0% |
| GAAGATGCATCTTGTTGATA+TGG | - | chr3_4:16352126-16352145 | None:intergenic | 35.0% | |
| ! | ACAAGATGCATCTTCTTTTC+GGG | + | chr3_4:16352131-16352150 | Msa0492550:intron | 35.0% |
| GAAGATGCATCTTGTTGATA+TGG | - | chr3_4:16352126-16352145 | None:intergenic | 35.0% | |
| ! | ACAAGATGCATCTTCTTTTC+GGG | + | chr3_4:16352131-16352150 | Msa0492550:intron | 35.0% |
| ACCACTAGCTAGTAACTTAA+AGG | + | chr3_4:16352862-16352881 | Msa0492550:intron | 35.0% | |
| ! | TCCTTTAAGTTACTAGCTAG+TGG | - | chr3_4:16352866-16352885 | None:intergenic | 35.0% |
| AGTAACTTAAAGGACCTAAG+TGG | + | chr3_4:16352872-16352891 | Msa0492550:intron | 35.0% | |
| CTTAAATGATAGGATCATGG+AGG | + | chr3_4:16352905-16352924 | Msa0492550:intron | 35.0% | |
| ! | TAGTATTGTTATTGTGCGGT+TGG | + | chr3_4:16352968-16352987 | Msa0492550:intron | 35.0% |
| ! | AAGCATTGTATCCGTTAGAA+AGG | + | chr3_4:16353028-16353047 | Msa0492550:intron | 35.0% |
| TTTCTAAGCTAAAAGAGAGG+AGG | - | chr3_4:16353132-16353151 | None:intergenic | 35.0% | |
| AGGTTTCTAAGCTAAAAGAG+AGG | - | chr3_4:16353135-16353154 | None:intergenic | 35.0% | |
| AGATAATCTTGTCGAAGACA+TGG | + | chr3_4:16353650-16353669 | Msa0492550:intron | 35.0% | |
| ! | TAGACCACTTTATTTCAGAC+AGG | + | chr3_4:16353701-16353720 | Msa0492550:intron | 35.0% |
| CATTACCCTACAAACAAAGT+TGG | - | chr3_4:16353737-16353756 | None:intergenic | 35.0% | |
| ATCTCTGTAAATATGGTCCT+CGG | + | chr3_4:16353913-16353932 | Msa0492550:intron | 35.0% | |
| ! | ACCGGTTAAAATTACCCTTT+TGG | - | chr3_4:16354013-16354032 | None:intergenic | 35.0% |
| ACATGACCCTTTCCAAAAAA+AGG | + | chr3_4:16354182-16354201 | Msa0492550:intron | 35.0% | |
| TACAAGAAATAGAACATGGC+AGG | + | chr3_4:16354240-16354259 | Msa0492550:intron | 35.0% | |
| ACAAGAAATAGAACATGGCA+GGG | + | chr3_4:16354241-16354260 | Msa0492550:intron | 35.0% | |
| ACCTCTTGTGCATAAACTTA+GGG | + | chr3_4:16354276-16354295 | Msa0492550:intron | 35.0% | |
| CACCTTTAATCAATGTGCTT+TGG | + | chr3_4:16354639-16354658 | Msa0492550:intron | 35.0% | |
| ! | GAAATTAAGAGAGTATAGGC+GGG | - | chr3_4:16354916-16354935 | None:intergenic | 35.0% |
| TCAGTCACTAAATCTATGAG+TGG | + | chr3_4:16355112-16355131 | Msa0492550:intron | 35.0% | |
| TATTCAACTTTCTCCTTGTG+TGG | - | chr3_4:16355379-16355398 | None:intergenic | 35.0% | |
| GAACATAGAATTATCATCCG+CGG | - | chr3_4:16355548-16355567 | None:intergenic | 35.0% | |
| ! | TGGGGTTTTACCAACATTTT+TGG | + | chr3_4:16355629-16355648 | Msa0492550:intron | 35.0% |
| ! | GGGGTTTTACCAACATTTTT+GGG | + | chr3_4:16355630-16355649 | Msa0492550:intron | 35.0% |
| CACAAGTATCCCAAAAATGT+TGG | - | chr3_4:16355642-16355661 | None:intergenic | 35.0% | |
| !!! | CAACATTTTTGGGATACTTG+TGG | + | chr3_4:16355640-16355659 | Msa0492550:intron | 35.0% |
| ! | TATATCAAGAAGGGTGCAAA+TGG | + | chr3_4:16355671-16355690 | Msa0492550:intron | 35.0% |
| TGATAGATTTGACATGAGTC+GGG | - | chr3_4:16355714-16355733 | None:intergenic | 35.0% | |
| ATACCTGAGTATCACCTTTA+GGG | - | chr3_4:16355750-16355769 | None:intergenic | 35.0% | |
| TGTGTATGAAATTGTAGCCA+AGG | + | chr3_4:16355807-16355826 | Msa0492550:intron | 35.0% | |
| TATCGAGGATATATCAACCT+GGG | - | chr3_4:16355897-16355916 | None:intergenic | 35.0% | |
| TTATCGAGGATATATCAACC+TGG | - | chr3_4:16355898-16355917 | None:intergenic | 35.0% | |
| TATCCTCGATAATGCAATGA+TGG | + | chr3_4:16355906-16355925 | Msa0492550:intron | 35.0% | |
| GCAAAAGCTAAAGGGAAAAT+TGG | + | chr3_4:16355955-16355974 | Msa0492550:intron | 35.0% | |
| !! | AAATGGGTTTTTCCTCTTGT+TGG | + | chr3_4:16356059-16356078 | Msa0492550:intron | 35.0% |
| !! | AATGGGTTTTTCCTCTTGTT+GGG | + | chr3_4:16356060-16356079 | Msa0492550:intron | 35.0% |
| CAAGTGTTCTAGCAATATGT+TGG | + | chr3_4:16356177-16356196 | Msa0492550:intron | 35.0% | |
| !! | TGTACCTTGTTTAGCTTTCT+TGG | + | chr3_4:16356235-16356254 | Msa0492550:intron | 35.0% |
| ACATCCAAGAAAGCTAAACA+AGG | - | chr3_4:16356242-16356261 | None:intergenic | 35.0% | |
| ! | CTCTAAAGATATGATTCACG+TGG | + | chr3_4:16356292-16356311 | Msa0492550:intron | 35.0% |
| AGATACACAGTTGATCCATA+CGG | - | chr3_4:16356445-16356464 | None:intergenic | 35.0% | |
| ATGGGCTTGATGAGAAATTT+AGG | - | chr3_4:16356472-16356491 | None:intergenic | 35.0% | |
| TAGCTCACAAACAACAACAA+TGG | - | chr3_4:16356586-16356605 | None:intergenic | 35.0% | |
| GTGTGAAAGATGTAATTCTG+CGG | + | chr3_4:16356633-16356652 | Msa0492550:intron | 35.0% | |
| TGTGAAAGATGTAATTCTGC+GGG | + | chr3_4:16356634-16356653 | Msa0492550:intron | 35.0% | |
| TTTGCATTGGAGTATAGGTA+CGG | + | chr3_4:16356658-16356677 | Msa0492550:intron | 35.0% | |
| !! | TAATACTCCACTATTGGCTT+TGG | + | chr3_4:16356864-16356883 | Msa0492550:intron | 35.0% |
| TTAATCACCAAAGCCAATAG+TGG | - | chr3_4:16356874-16356893 | None:intergenic | 35.0% | |
| GTATACCTGGAAATTAGAGA+AGG | + | chr3_4:16356902-16356921 | Msa0492550:intron | 35.0% | |
| ! | GATTACAACCGAACTCTTTT+AGG | - | chr3_4:16357086-16357105 | None:intergenic | 35.0% |
| AGAGTTCGGTTGTAATCAAA+AGG | + | chr3_4:16357089-16357108 | Msa0492550:intron | 35.0% | |
| !!! | CAAAGACTTGTTTTTGTTGC+TGG | - | chr3_4:16357301-16357320 | None:intergenic | 35.0% |
| CAGCAACAAAAACAAGTCTT+TGG | + | chr3_4:16357299-16357318 | Msa0492550:intron | 35.0% | |
| ATGCTTTCAGATACTCCATA+GGG | - | chr3_4:16357330-16357349 | None:intergenic | 35.0% | |
| ! | CTGAAAGCATGGAAATAACA+AGG | + | chr3_4:16357340-16357359 | Msa0492550:intron | 35.0% |
| AGCATGGAAATAACAAGGTT+TGG | + | chr3_4:16357345-16357364 | Msa0492550:intron | 35.0% | |
| ! | AAGGTTCTTTTCTTACTTGC+TGG | + | chr3_4:16357408-16357427 | Msa0492550:intron | 35.0% |
| CATTTATACCTGTTGGAACT+TGG | - | chr3_4:16357506-16357525 | None:intergenic | 35.0% | |
| ATGTGTATTCGAGATGATGA+GGG | + | chr3_4:16357575-16357594 | Msa0492550:intron | 35.0% | |
| GTTTGATTCCAAAATTGTGG+TGG | + | chr3_4:16357723-16357742 | Msa0492550:intron | 35.0% | |
| AGTATATATGGTGGTAAGAG+TGG | + | chr3_4:16357748-16357767 | Msa0492550:intron | 35.0% | |
| ATTTGTGGTTGTTAGTTGAG+TGG | - | chr3_4:16358125-16358144 | None:intergenic | 35.0% | |
| !! | TCTATAGTTTGTTGTTCGGA+GGG | - | chr3_4:16358181-16358200 | None:intergenic | 35.0% |
| TTCTACTACCATGACATTAG+AGG | + | chr3_4:16358220-16358239 | Msa0492550:CDS | 35.0% | |
| ! | TTTTGTTGCCTCTAATGTCA+TGG | - | chr3_4:16358231-16358250 | None:intergenic | 35.0% |
| ! | CAATGATTTGTAACATGGTG+GGG | - | chr3_4:16358255-16358274 | None:intergenic | 35.0% |
| ! | GTCAATGATTTGTAACATGG+TGG | - | chr3_4:16358257-16358276 | None:intergenic | 35.0% |
| ACACCACAAAATGTAGCTAA+TGG | + | chr3_4:16358277-16358296 | Msa0492550:CDS | 35.0% | |
| ATAATGTTCAGGGGTAGAAA+TGG | - | chr3_4:16358587-16358606 | None:intergenic | 35.0% | |
| CTCAACAACATAATGTTCAG+GGG | - | chr3_4:16358596-16358615 | None:intergenic | 35.0% | |
| CCAAACCCAACTGTATTTGA+TGG | - | chr3_4:16349100-16349119 | None:intergenic | 40.0% | |
| CCATCAAATACAGTTGGGTT+TGG | + | chr3_4:16349097-16349116 | Msa0492550:CDS | 40.0% | |
| ! | GTTTGGAGCAAGTTACATGA+TGG | + | chr3_4:16349114-16349133 | Msa0492550:CDS | 40.0% |
| ATGGACAACCTCTTAACTGA+AGG | + | chr3_4:16349133-16349152 | Msa0492550:CDS | 40.0% | |
| GAGCTAACATCAAAACCTGT+CGG | + | chr3_4:16349160-16349179 | Msa0492550:CDS | 40.0% | |
| ATCTTTGCATGATCGTGGAA+TGG | + | chr3_4:16349210-16349229 | Msa0492550:CDS | 40.0% | |
| ACTACCAGCAAAATCACCAT+CGG | - | chr3_4:16349260-16349279 | None:intergenic | 40.0% | |
| GGTAGTACTCTTAGTATGCT+TGG | + | chr3_4:16349274-16349293 | Msa0492550:CDS | 40.0% | |
| GTACTCTTAGTATGCTTGGA+AGG | + | chr3_4:16349278-16349297 | Msa0492550:CDS | 40.0% | |
| AAGGAATCCTGTTCAAGACA+CGG | + | chr3_4:16349297-16349316 | Msa0492550:CDS | 40.0% | |
| GTTAGAGAACTGCCTATTGT+TGG | + | chr3_4:16349319-16349338 | Msa0492550:CDS | 40.0% | |
| !! | ATGCTACTGCTAAGAGTGTT+TGG | + | chr3_4:16349374-16349393 | Msa0492550:CDS | 40.0% |
| !! | TGCTACTGCTAAGAGTGTTT+GGG | + | chr3_4:16349375-16349394 | Msa0492550:CDS | 40.0% |
| GTGTATCTCTTACATCCTAG+TGG | + | chr3_4:16349493-16349512 | Msa0492550:intron | 40.0% | |
| CCCGAAATCAAAACCCTAAA+AGG | - | chr3_4:16349543-16349562 | None:intergenic | 40.0% | |
| TGAAGCAGAAGTAGTTGTCA+TGG | + | chr3_4:16349667-16349686 | Msa0492550:intron | 40.0% | |
| ! | CATTTTCTTCGATTAGGAGG+TGG | + | chr3_4:16349842-16349861 | Msa0492550:intron | 40.0% |
| ! | TTCGATTAGGAGGTGGTTTT+GGG | + | chr3_4:16349849-16349868 | Msa0492550:intron | 40.0% |
| GACACTTAAAAAGGAACGGA+AGG | - | chr3_4:16350600-16350619 | None:intergenic | 40.0% | |
| CGACACTTGAAAAAAAACGG+AGG | + | chr3_4:16351290-16351309 | Msa0492550:intron | 40.0% | |
| TATAAGGCCAAGAGAAAGGT+TGG | + | chr3_4:16351396-16351415 | Msa0492550:intron | 40.0% | |
| ATAAGGCCAAGAGAAAGGTT+GGG | + | chr3_4:16351397-16351416 | Msa0492550:intron | 40.0% | |
| ! | TTCTTGGTAAGGTGTTTAGG+CGG | - | chr3_4:16351631-16351650 | None:intergenic | 40.0% |
| ! | GTCTTCTTGGTAAGGTGTTT+AGG | - | chr3_4:16351634-16351653 | None:intergenic | 40.0% |
| ! | TCGGCTTTGATACCACTATT+AGG | + | chr3_4:16351693-16351712 | Msa0492550:intron | 40.0% |
| ATACCACTATTAGGTCACGA+GGG | + | chr3_4:16351702-16351721 | Msa0492550:intron | 40.0% | |
| TAATGTGCAACTCACTTGTG+CGG | - | chr3_4:16351760-16351779 | None:intergenic | 40.0% | |
| TTAAACTGTTCCCCTTAGGT+CGG | - | chr3_4:16351979-16351998 | None:intergenic | 40.0% | |
| TAGTAGGAACCGAAACACAT+CGG | + | chr3_4:16352022-16352041 | Msa0492550:intron | 40.0% | |
| !! | AAAAGACTCGTGTTGGTTTG+TGG | + | chr3_4:16352268-16352287 | Msa0492550:intron | 40.0% |
| !! | AAAGACTCGTGTTGGTTTGT+GGG | + | chr3_4:16352269-16352288 | Msa0492550:intron | 40.0% |
| TCGGTTTCTACTATTGTCGT+GGG | - | chr3_4:16352493-16352512 | None:intergenic | 40.0% | |
| TTCGGTTTCTACTATTGTCG+TGG | - | chr3_4:16352494-16352513 | None:intergenic | 40.0% | |
| TAGTAGAAACCGAAACACGT+CGG | + | chr3_4:16352500-16352519 | Msa0492550:intron | 40.0% | |
| !! | AAAAGACTCGTGTTGGTTTG+TGG | + | chr3_4:16352268-16352287 | Msa0492550:intron | 40.0% |
| !! | AAAGACTCGTGTTGGTTTGT+GGG | + | chr3_4:16352269-16352288 | Msa0492550:intron | 40.0% |
| GTGATACTCGATTTAGTACG+CGG | + | chr3_4:16353627-16353646 | Msa0492550:intron | 40.0% | |
| TGTTTGTAGGGTAATGAGCT+TGG | + | chr3_4:16353741-16353760 | Msa0492550:intron | 40.0% | |
| TTCTCTGTAAATGTGGTCCT+CGG | + | chr3_4:16353842-16353861 | Msa0492550:intron | 40.0% | |
| TCTCTGTAAATATGGTCCTC+GGG | + | chr3_4:16353914-16353933 | Msa0492550:intron | 40.0% | |
| TCATGTTAACCAGTGCTCTT+GGG | - | chr3_4:16354168-16354187 | None:intergenic | 40.0% | |
| AATAGAACATGGCAGGGTTA+TGG | + | chr3_4:16354247-16354266 | Msa0492550:intron | 40.0% | |
| GACCTCTTGTGCATAAACTT+AGG | + | chr3_4:16354275-16354294 | Msa0492550:intron | 40.0% | |
| ACCCTAAGTTTATGCACAAG+AGG | - | chr3_4:16354280-16354299 | None:intergenic | 40.0% | |
| TTCCCTGTATAATACGTTCC+TGG | + | chr3_4:16354390-16354409 | Msa0492550:intron | 40.0% | |
| TCCCTGTATAATACGTTCCT+GGG | + | chr3_4:16354391-16354410 | Msa0492550:intron | 40.0% | |
| TCCCAGGAACGTATTATACA+GGG | - | chr3_4:16354395-16354414 | None:intergenic | 40.0% | |
| TTCCCAGGAACGTATTATAC+AGG | - | chr3_4:16354396-16354415 | None:intergenic | 40.0% | |
| CTGAATCGGTCTCTAAATGA+TGG | - | chr3_4:16354735-16354754 | None:intergenic | 40.0% | |
| TTGCGACTACACATAGAAAC+TGG | - | chr3_4:16355007-16355026 | None:intergenic | 40.0% | |
| AGTCGTTAGATCGTTCACAA+AGG | + | chr3_4:16355045-16355064 | Msa0492550:intron | 40.0% | |
| TGAAGCTATTCGTACACATG+TGG | + | chr3_4:16355209-16355228 | Msa0492550:intron | 40.0% | |
| TTTGAATGCCGCTCTTAAGA+TGG | + | chr3_4:16355427-16355446 | Msa0492550:intron | 40.0% | |
| ATTATCATCCGCGGTGATTA+AGG | - | chr3_4:16355539-16355558 | None:intergenic | 40.0% | |
| TATCCCTAAAGGTGATACTC+AGG | + | chr3_4:16355744-16355763 | Msa0492550:intron | 40.0% | |
| GATACCTGAGTATCACCTTT+AGG | - | chr3_4:16355751-16355770 | None:intergenic | 40.0% | |
| TGATACTCAGGTATCCATGA+AGG | + | chr3_4:16355756-16355775 | Msa0492550:intron | 40.0% | |
| AGGTATCCATGAAGGATTAG+CGG | + | chr3_4:16355764-16355783 | Msa0492550:intron | 40.0% | |
| ! | GCTTGCTAATAGACTCAAAC+AGG | + | chr3_4:16355831-16355850 | Msa0492550:intron | 40.0% |
| AATCAATCATCTTTCGTCCC+AGG | + | chr3_4:16355877-16355896 | Msa0492550:intron | 40.0% | |
| AGCTAAAGGGAAAATTGGAG+AGG | + | chr3_4:16355960-16355979 | Msa0492550:intron | 40.0% | |
| TGGAGAGGTTGAACTTAAGT+TGG | + | chr3_4:16355975-16355994 | Msa0492550:intron | 40.0% | |
| !! | TTTCCTCTTGTTGGGTTAGT+TGG | + | chr3_4:16356068-16356087 | Msa0492550:intron | 40.0% |
| ATGTAGCCAGTGTACATCAT+GGG | - | chr3_4:16356490-16356509 | None:intergenic | 40.0% | |
| TATGTAGCCAGTGTACATCA+TGG | - | chr3_4:16356491-16356510 | None:intergenic | 40.0% | |
| ! | GATGTACACTGGCTACATAA+AGG | + | chr3_4:16356492-16356511 | Msa0492550:intron | 40.0% |
| TTGACAATTGCGGCTTCAAT+TGG | - | chr3_4:16356538-16356557 | None:intergenic | 40.0% | |
| ! | TGTTGTTTGTGAGCTACTCT+TGG | + | chr3_4:16356590-16356609 | Msa0492550:intron | 40.0% |
| ! | TAATTCTGCGGGTTTTGCAT+TGG | + | chr3_4:16356645-16356664 | Msa0492550:intron | 40.0% |
| TTGCATTGGAGTATAGGTAC+GGG | + | chr3_4:16356659-16356678 | Msa0492550:intron | 40.0% | |
| ATCGTCCTTCTCTAATTTCC+AGG | - | chr3_4:16356910-16356929 | None:intergenic | 40.0% | |
| CTTTACAACATCGTGTGCTA+AGG | + | chr3_4:16356982-16357001 | Msa0492550:intron | 40.0% | |
| ! | GTAGTAAAAGTGTGCTTCGT+TGG | + | chr3_4:16357183-16357202 | Msa0492550:intron | 40.0% |
| CAGAGACTCCATAATTTGGT+GGG | - | chr3_4:16357212-16357231 | None:intergenic | 40.0% | |
| CATCCAGAGACTCCATAATT+TGG | - | chr3_4:16357216-16357235 | None:intergenic | 40.0% | |
| CAAATTATGGAGTCTCTGGA+TGG | + | chr3_4:16357214-16357233 | Msa0492550:intron | 40.0% | |
| !! | TTTGTCGGAAAACTTGTTGC+AGG | - | chr3_4:16357251-16357270 | None:intergenic | 40.0% |
| CATGCTTTCAGATACTCCAT+AGG | - | chr3_4:16357331-16357350 | None:intergenic | 40.0% | |
| ! | CTATGGAGTATCTGAAAGCA+TGG | + | chr3_4:16357329-16357348 | Msa0492550:intron | 40.0% |
| TCCCATTCATTGAATCAGGT+TGG | + | chr3_4:16357545-16357564 | Msa0492550:intron | 40.0% | |
| CCCAACCTGATTCAATGAAT+GGG | - | chr3_4:16357549-16357568 | None:intergenic | 40.0% | |
| CCCATTCATTGAATCAGGTT+GGG | + | chr3_4:16357546-16357565 | Msa0492550:intron | 40.0% | |
| CATGTGTATTCGAGATGATG+AGG | + | chr3_4:16357574-16357593 | Msa0492550:intron | 40.0% | |
| !! | GTGGTGGATAGTATATATGG+TGG | + | chr3_4:16357739-16357758 | Msa0492550:intron | 40.0% |
| TTGAGTGGAAATGAGTGTGA+GGG | - | chr3_4:16358110-16358129 | None:intergenic | 40.0% | |
| !! | CTCTATAGTTTGTTGTTCGG+AGG | - | chr3_4:16358182-16358201 | None:intergenic | 40.0% |
| ATGGATGATGCAATGACTGA+AGG | + | chr3_4:16358319-16358338 | Msa0492550:CDS | 40.0% | |
| AAACACATTGGAAGAGCTCA+AGG | + | chr3_4:16358358-16358377 | Msa0492550:CDS | 40.0% | |
| AACACATTGGAAGAGCTCAA+GGG | + | chr3_4:16358359-16358378 | Msa0492550:CDS | 40.0% | |
| !! | TGGAAGCACTCTTAGTATGT+TGG | + | chr3_4:16358459-16358478 | Msa0492550:CDS | 40.0% |
| !! | GGAAGCACTCTTAGTATGTT+GGG | + | chr3_4:16358460-16358479 | Msa0492550:CDS | 40.0% |
| AGAGAAACGTCTATTGTTGG+TGG | + | chr3_4:16358508-16358527 | Msa0492550:CDS | 40.0% | |
| TTGTTCGGAGAACACTCCAT+TGG | - | chr3_4:16348963-16348982 | None:intergenic | 45.0% | |
| GCTCTTGTCCTTCAGTTAAG+AGG | - | chr3_4:16349144-16349163 | None:intergenic | 45.0% | |
| AGCTCAAGGGATGTTTGGTT+TGG | + | chr3_4:16349186-16349205 | Msa0492550:CDS | 45.0% | |
| TTGGCATCTTTGCATGATCG+TGG | + | chr3_4:16349205-16349224 | Msa0492550:CDS | 45.0% | |
| ! | TTCACCGATGGTGATTTTGC+TGG | + | chr3_4:16349253-16349272 | Msa0492550:CDS | 45.0% |
| TCTCTAACCGTGTCTTGAAC+AGG | - | chr3_4:16349307-16349326 | None:intergenic | 45.0% | |
| AGAGAACTGCCTATTGTTGG+CGG | + | chr3_4:16349322-16349341 | Msa0492550:CDS | 45.0% | |
| ! | TTGAGTTTGTGTTGGCCACT+AGG | + | chr3_4:16349595-16349614 | Msa0492550:intron | 45.0% |
| ! | CTTCGATTAGGAGGTGGTTT+TGG | + | chr3_4:16349848-16349867 | Msa0492550:intron | 45.0% |
| CGATGAAGATGCGTGATTTC+AGG | - | chr3_4:16349886-16349905 | None:intergenic | 45.0% | |
| ACGTTGATGCGAGGTGAATA+AGG | + | chr3_4:16351010-16351029 | Msa0492550:intron | 45.0% | |
| CAAGAGAAAGGTTGGGCATA+CGG | + | chr3_4:16351404-16351423 | Msa0492550:intron | 45.0% | |
| AAGAGAAAGGTTGGGCATAC+GGG | + | chr3_4:16351405-16351424 | Msa0492550:intron | 45.0% | |
| CTGTTGTCAAAGGCAACAAC+AGG | + | chr3_4:16351600-16351619 | Msa0492550:intron | 45.0% | |
| GATACCACTATTAGGTCACG+AGG | + | chr3_4:16351701-16351720 | Msa0492550:intron | 45.0% | |
| TTTCCCTCGTGACCTAATAG+TGG | - | chr3_4:16351708-16351727 | None:intergenic | 45.0% | |
| AACCTTTCGTATCCACCTAG+CGG | - | chr3_4:16351955-16351974 | None:intergenic | 45.0% | |
| TAAACTGTTCCCCTTAGGTC+GGG | - | chr3_4:16351978-16351997 | None:intergenic | 45.0% | |
| TCGGTTCCTACTATTGTCGT+GGG | - | chr3_4:16352015-16352034 | None:intergenic | 45.0% | |
| TTCGGTTCCTACTATTGTCG+TGG | - | chr3_4:16352016-16352035 | None:intergenic | 45.0% | |
| CCTCTCATTCCGATGTGTTT+CGG | - | chr3_4:16352034-16352053 | None:intergenic | 45.0% | |
| CGAAACACATCGGAATGAGA+GGG | + | chr3_4:16352032-16352051 | Msa0492550:intron | 45.0% | |
| CATGTAGTCCCATACCTACA+CGG | - | chr3_4:16352067-16352086 | None:intergenic | 45.0% | |
| GTATGGGACTACATGGTTGA+AGG | + | chr3_4:16352072-16352091 | Msa0492550:intron | 45.0% | |
| !! | TTTTCGGGAGCTCAATCCAT+AGG | + | chr3_4:16352146-16352165 | Msa0492550:intron | 45.0% |
| GCTTAACTGTGGAGTTCCTA+TGG | - | chr3_4:16352165-16352184 | None:intergenic | 45.0% | |
| GCTTGGAGTAGTACTAGGAT+GGG | + | chr3_4:16352192-16352211 | Msa0492550:intron | 45.0% | |
| CATGCTGAAAAGACTCGTGT+TGG | + | chr3_4:16352261-16352280 | Msa0492550:intron | 45.0% | |
| !! | AAGACTCGTGTTGGTTTGTG+GGG | + | chr3_4:16352270-16352289 | Msa0492550:intron | 45.0% |
| !! | TGTTGGTTTGTGGGGTTAGT+CGG | + | chr3_4:16352278-16352297 | Msa0492550:intron | 45.0% |
| TAACATCCCAGACTGCTTAC+AGG | - | chr3_4:16352308-16352327 | None:intergenic | 45.0% | |
| AACCTTTCGTATCCACCTAG+CGG | - | chr3_4:16351955-16351974 | None:intergenic | 45.0% | |
| TTAAACCGTTCCCCTTAGGT+CGG | - | chr3_4:16352457-16352476 | None:intergenic | 45.0% | |
| GGTTTCTACTATTGTCGTGG+GGG | - | chr3_4:16352491-16352510 | None:intergenic | 45.0% | |
| CGGTTTCTACTATTGTCGTG+GGG | - | chr3_4:16352492-16352511 | None:intergenic | 45.0% | |
| CATGTAGTCCCATACCTACA+CGG | - | chr3_4:16352067-16352086 | None:intergenic | 45.0% | |
| GTATGGGACTACATGGTTGA+AGG | + | chr3_4:16352072-16352091 | Msa0492550:intron | 45.0% | |
| !! | TTTTCGGGAGCTCAATCCAT+AGG | + | chr3_4:16352146-16352165 | Msa0492550:intron | 45.0% |
| GCTTAACTGTGGAGTTCCTA+TGG | - | chr3_4:16352165-16352184 | None:intergenic | 45.0% | |
| GCTTGGAGTAGTACTAGGAT+GGG | + | chr3_4:16352192-16352211 | Msa0492550:intron | 45.0% | |
| CATGCTGAAAAGACTCGTGT+TGG | + | chr3_4:16352261-16352280 | Msa0492550:intron | 45.0% | |
| !! | AAGACTCGTGTTGGTTTGTG+GGG | + | chr3_4:16352270-16352289 | Msa0492550:intron | 45.0% |
| !! | TGTTGGTTTGTGGGGTTAGT+CGG | + | chr3_4:16352278-16352297 | Msa0492550:intron | 45.0% |
| TAACATCCCAGACTGCTTAC+AGG | - | chr3_4:16352308-16352327 | None:intergenic | 45.0% | |
| TGATAGGATCATGGAGGCTA+AGG | + | chr3_4:16352911-16352930 | Msa0492550:intron | 45.0% | |
| TCTCTGTAAATGTGGTCCTC+GGG | + | chr3_4:16353843-16353862 | Msa0492550:intron | 45.0% | |
| !! | GGTAATTTTAACCGGTGTCC+CGG | + | chr3_4:16354017-16354036 | Msa0492550:intron | 45.0% |
| CATGTTAACCAGTGCTCTTG+GGG | - | chr3_4:16354167-16354186 | None:intergenic | 45.0% | |
| GTCATGTTAACCAGTGCTCT+TGG | - | chr3_4:16354169-16354188 | None:intergenic | 45.0% | |
| ! | GTGCTTTGGATCTCTCTAAG+TGG | + | chr3_4:16354653-16354672 | Msa0492550:intron | 45.0% |
| GTGTACGAATAGCTTCAAGC+TGG | - | chr3_4:16355206-16355225 | None:intergenic | 45.0% | |
| GCTTCAGACCATCTTAAGAG+CGG | - | chr3_4:16355438-16355457 | None:intergenic | 45.0% | |
| AGATTAAATCCACCCGGCAT+GGG | - | chr3_4:16355610-16355629 | None:intergenic | 45.0% | |
| ! | ATGCCGGGTGGATTTAATCT+GGG | + | chr3_4:16355610-16355629 | Msa0492550:intron | 45.0% |
| AACCCCAGATTAAATCCACC+CGG | - | chr3_4:16355616-16355635 | None:intergenic | 45.0% | |
| AGTAGTCCGCTAATCCTTCA+TGG | - | chr3_4:16355773-16355792 | None:intergenic | 45.0% | |
| GAGTCTATTAGCAAGCACCT+TGG | - | chr3_4:16355827-16355846 | None:intergenic | 45.0% | |
| TGGCCATCATTGCATTATCG+AGG | - | chr3_4:16355912-16355931 | None:intergenic | 45.0% | |
| GATCCAACTAACCCAACAAG+AGG | - | chr3_4:16356074-16356093 | None:intergenic | 45.0% | |
| GCTCTACAAGCATCAAGATG+CGG | + | chr3_4:16356336-16356355 | Msa0492550:intron | 45.0% | |
| ATTGTGTGCTGAAGACCGTA+TGG | + | chr3_4:16356427-16356446 | Msa0492550:intron | 45.0% | |
| ATCAAGCCCATGATGTACAC+TGG | + | chr3_4:16356481-16356500 | Msa0492550:intron | 45.0% | |
| GCGGCTTCAATTGGTACATT+AGG | - | chr3_4:16356529-16356548 | None:intergenic | 45.0% | |
| ! | CGGGTTTTGCATTGGAGTAT+AGG | + | chr3_4:16356653-16356672 | Msa0492550:intron | 45.0% |
| GGGAGAACGAATACCAATCT+GGG | + | chr3_4:16356679-16356698 | Msa0492550:intron | 45.0% | |
| CAGCATTACAAAGCCAAGGA+TGG | - | chr3_4:16356706-16356725 | None:intergenic | 45.0% | |
| ATATGTGGCCACTCCAAATG+TGG | - | chr3_4:16356752-16356771 | None:intergenic | 45.0% | |
| ATGGTTACACCCAGAAGCAA+TGG | + | chr3_4:16356788-16356807 | Msa0492550:intron | 45.0% | |
| CTCCATGTTCCATTGCTTCT+GGG | - | chr3_4:16356800-16356819 | None:intergenic | 45.0% | |
| AGGACGATGCTTATACAGCT+AGG | + | chr3_4:16356922-16356941 | Msa0492550:intron | 45.0% | |
| ! | TACAGCTAGGAGTGCATACA+AGG | + | chr3_4:16356935-16356954 | Msa0492550:intron | 45.0% |
| AACATCGTGTGCTAAGGAAC+TGG | + | chr3_4:16356988-16357007 | Msa0492550:intron | 45.0% | |
| ! | GAAGCTTAAGTTGCCACCAA+AGG | + | chr3_4:16357022-16357041 | Msa0492550:intron | 45.0% |
| GTTGGAAGCCCACCAAATTA+TGG | + | chr3_4:16357201-16357220 | Msa0492550:intron | 45.0% | |
| CCAGAGACTCCATAATTTGG+TGG | - | chr3_4:16357213-16357232 | None:intergenic | 45.0% | |
| CCACCAAATTATGGAGTCTC+TGG | + | chr3_4:16357210-16357229 | Msa0492550:intron | 45.0% | |
| ! | AAGTCTTTGGTGTGACCCTA+TGG | + | chr3_4:16357312-16357331 | Msa0492550:intron | 45.0% |
| TGCAAGTCTCCTTGACAAGT+GGG | - | chr3_4:16357473-16357492 | None:intergenic | 45.0% | |
| TTGCAAGTCTCCTTGACAAG+TGG | - | chr3_4:16357474-16357493 | None:intergenic | 45.0% | |
| CTTGTCAAGGAGACTTGCAA+TGG | + | chr3_4:16357474-16357493 | Msa0492550:intron | 45.0% | |
| GGCATAAACCAAGTTCCAAC+AGG | + | chr3_4:16357495-16357514 | Msa0492550:intron | 45.0% | |
| GCCCAACCTGATTCAATGAA+TGG | - | chr3_4:16357550-16357569 | None:intergenic | 45.0% | |
| !! | TCATTGAATCAGGTTGGGCT+TGG | + | chr3_4:16357551-16357570 | Msa0492550:intron | 45.0% |
| !! | TGATGAGGGTCATTTTGTGC+TGG | + | chr3_4:16357589-16357608 | Msa0492550:intron | 45.0% |
| GTTGAGTGGAAATGAGTGTG+AGG | - | chr3_4:16358111-16358130 | None:intergenic | 45.0% | |
| GCACTCTTAGTATGTTGGGA+AGG | + | chr3_4:16358464-16358483 | Msa0492550:CDS | 45.0% | |
| ! | ACGTCTATTGTTGGTGGAAC+TGG | + | chr3_4:16358514-16358533 | Msa0492550:CDS | 45.0% |
| !! | ATACTTTAATAAAAAAATTA+AGG | + | chr3_4:16351779-16351798 | Msa0492550:intron | 5.0% |
| !!! | ATTTTAAAATTTCTTTTTTT+AGG | + | chr3_4:16354127-16354146 | Msa0492550:intron | 5.0% |
| AAACCTGTCGGTAGAGCTCA+AGG | + | chr3_4:16349172-16349191 | Msa0492550:CDS | 50.0% | |
| AACCTGTCGGTAGAGCTCAA+GGG | + | chr3_4:16349173-16349192 | Msa0492550:CDS | 50.0% | |
| GGTAGAGCTCAAGGGATGTT+TGG | + | chr3_4:16349181-16349200 | Msa0492550:CDS | 50.0% | |
| CCTAGCAAACCTAAACACGC+CGG | - | chr3_4:16349350-16349369 | None:intergenic | 50.0% | |
| !! | CGGCGTGTTTAGGTTTGCTA+GGG | + | chr3_4:16349348-16349367 | Msa0492550:CDS | 50.0% |
| !! | GGCGTGTTTAGGTTTGCTAG+GGG | + | chr3_4:16349349-16349368 | Msa0492550:CDS | 50.0% |
| CTCATTGGAACGTTGATGCG+AGG | + | chr3_4:16351001-16351020 | Msa0492550:intron | 50.0% | |
| CGTATGCCCAACCTTTCTCT+TGG | - | chr3_4:16351406-16351425 | None:intergenic | 50.0% | |
| ! | GTTTTGTAACACCCACGTCG+TGG | + | chr3_4:16351918-16351937 | Msa0492550:intron | 50.0% |
| GATATCGAAAGCCACGACGT+GGG | - | chr3_4:16351932-16351951 | None:intergenic | 50.0% | |
| ACCTTTCGTATCCACCTAGC+GGG | - | chr3_4:16351954-16351973 | None:intergenic | 50.0% | |
| TACGAAAGGTTCCCGACCTA+AGG | + | chr3_4:16351964-16351983 | Msa0492550:intron | 50.0% | |
| ACGAAAGGTTCCCGACCTAA+GGG | + | chr3_4:16351965-16351984 | Msa0492550:intron | 50.0% | |
| CGGCTTAAACTGTTCCCCTT+AGG | - | chr3_4:16351983-16352002 | None:intergenic | 50.0% | |
| GGGAACAGTTTAAGCCGCAA+GGG | + | chr3_4:16351986-16352005 | Msa0492550:intron | 50.0% | |
| GGTTCCTACTATTGTCGTGG+GGG | - | chr3_4:16352013-16352032 | None:intergenic | 50.0% | |
| CGGTTCCTACTATTGTCGTG+GGG | - | chr3_4:16352014-16352033 | None:intergenic | 50.0% | |
| CCGAAACACATCGGAATGAG+AGG | + | chr3_4:16352031-16352050 | Msa0492550:intron | 50.0% | |
| ACATCGGAATGAGAGGGATC+CGG | + | chr3_4:16352038-16352057 | Msa0492550:intron | 50.0% | |
| CGTGTAGGTATGGGACTACA+TGG | + | chr3_4:16352065-16352084 | Msa0492550:intron | 50.0% | |
| GGGACTACATGGTTGAAGGA+AGG | + | chr3_4:16352076-16352095 | Msa0492550:intron | 50.0% | |
| ACTCCACAGTTAAGCGTGCT+TGG | + | chr3_4:16352170-16352189 | Msa0492550:intron | 50.0% | |
| AAGCCAAGCACGCTTAACTG+TGG | - | chr3_4:16352176-16352195 | None:intergenic | 50.0% | |
| ACAGTTAAGCGTGCTTGGCT+TGG | + | chr3_4:16352175-16352194 | Msa0492550:intron | 50.0% | |
| !! | GCTTGGCTTGGAGTAGTACT+AGG | + | chr3_4:16352187-16352206 | Msa0492550:intron | 50.0% |
| GGCTTGGAGTAGTACTAGGA+TGG | + | chr3_4:16352191-16352210 | Msa0492550:intron | 50.0% | |
| TGACCTACCAGGAAGTTTCC+CGG | + | chr3_4:16352215-16352234 | Msa0492550:intron | 50.0% | |
| TTACCGGGAAACTTCCTGGT+AGG | - | chr3_4:16352221-16352240 | None:intergenic | 50.0% | |
| ATGCTTACCGGGAAACTTCC+TGG | - | chr3_4:16352225-16352244 | None:intergenic | 50.0% | |
| TCCTCACTCACATGCTTACC+GGG | - | chr3_4:16352236-16352255 | None:intergenic | 50.0% | |
| GTCCTCACTCACATGCTTAC+CGG | - | chr3_4:16352237-16352256 | None:intergenic | 50.0% | |
| GGCAATCCTGTAAGCAGTCT+GGG | + | chr3_4:16352299-16352318 | Msa0492550:intron | 50.0% | |
| ! | GCAGTCTGGGATGTTACACT+TGG | + | chr3_4:16352312-16352331 | Msa0492550:intron | 50.0% |
| GATATCGAAAGCCACGACGT+GGG | - | chr3_4:16351932-16351951 | None:intergenic | 50.0% | |
| ACCTTTCGTATCCACCTAGC+GGG | - | chr3_4:16351954-16351973 | None:intergenic | 50.0% | |
| TACGAAAGGTTCCCGACCTA+AGG | + | chr3_4:16351964-16351983 | Msa0492550:intron | 50.0% | |
| ACGAAAGGTTCCCGACCTAA+GGG | + | chr3_4:16351965-16351984 | Msa0492550:intron | 50.0% | |
| TAAACCGTTCCCCTTAGGTC+GGG | - | chr3_4:16352456-16352475 | None:intergenic | 50.0% | |
| CCTCTCATTCCGACGTGTTT+CGG | - | chr3_4:16352512-16352531 | None:intergenic | 50.0% | |
| CGAAACACGTCGGAATGAGA+GGG | + | chr3_4:16352510-16352529 | Msa0492550:intron | 50.0% | |
| CGTGTAGGTATGGGACTACA+TGG | + | chr3_4:16352065-16352084 | Msa0492550:intron | 50.0% | |
| GGGACTACATGGTTGAAGGA+AGG | + | chr3_4:16352076-16352095 | Msa0492550:intron | 50.0% | |
| ACTCCACAGTTAAGCGTGCT+TGG | + | chr3_4:16352170-16352189 | Msa0492550:intron | 50.0% | |
| AAGCCAAGCACGCTTAACTG+TGG | - | chr3_4:16352176-16352195 | None:intergenic | 50.0% | |
| ACAGTTAAGCGTGCTTGGCT+TGG | + | chr3_4:16352175-16352194 | Msa0492550:intron | 50.0% | |
| !! | GCTTGGCTTGGAGTAGTACT+AGG | + | chr3_4:16352187-16352206 | Msa0492550:intron | 50.0% |
| GGCTTGGAGTAGTACTAGGA+TGG | + | chr3_4:16352191-16352210 | Msa0492550:intron | 50.0% | |
| TACTAGGATGGGTGACCTAC+CGG | + | chr3_4:16352203-16352222 | Msa0492550:intron | 50.0% | |
| ATGCTTACCGGGAAACTTCC+CGG | - | chr3_4:16352225-16352244 | None:intergenic | 50.0% | |
| TCCTCACTCACATGCTTACC+GGG | - | chr3_4:16352236-16352255 | None:intergenic | 50.0% | |
| GTCCTCACTCACATGCTTAC+CGG | - | chr3_4:16352237-16352256 | None:intergenic | 50.0% | |
| GGCAATCCTGTAAGCAGTCT+GGG | + | chr3_4:16352299-16352318 | Msa0492550:intron | 50.0% | |
| ! | TATTTGAGTGATGGCGCACG+AGG | - | chr3_4:16353810-16353829 | None:intergenic | 50.0% |
| !! | AATTTTAACCGGTGTCCCGG+AGG | + | chr3_4:16354020-16354039 | Msa0492550:intron | 50.0% |
| CTTTCTTAACCAGTGCCTCC+GGG | - | chr3_4:16354038-16354057 | None:intergenic | 50.0% | |
| GCTTTCTTAACCAGTGCCTC+CGG | - | chr3_4:16354039-16354058 | None:intergenic | 50.0% | |
| CAGATTAAATCCACCCGGCA+TGG | - | chr3_4:16355611-16355630 | None:intergenic | 50.0% | |
| ! | CATGCCGGGTGGATTTAATC+TGG | + | chr3_4:16355609-16355628 | Msa0492550:intron | 50.0% |
| ! | TGCCGGGTGGATTTAATCTG+GGG | + | chr3_4:16355611-16355630 | Msa0492550:intron | 50.0% |
| CTTGTAGAGCACACGCTTCT+TGG | - | chr3_4:16356326-16356345 | None:intergenic | 50.0% | |
| CGGGAGAACGAATACCAATC+TGG | + | chr3_4:16356678-16356697 | Msa0492550:intron | 50.0% | |
| ! | TACCAATCTGGGACCATCCT+TGG | + | chr3_4:16356690-16356709 | Msa0492550:intron | 50.0% |
| TCCAAATGTGGAGGAGTGGT+CGG | - | chr3_4:16356740-16356759 | None:intergenic | 50.0% | |
| CACCCAGAAGCAATGGAACA+TGG | + | chr3_4:16356795-16356814 | Msa0492550:intron | 50.0% | |
| GCTCCATGTTCCATTGCTTC+TGG | - | chr3_4:16356801-16356820 | None:intergenic | 50.0% | |
| ! | TAACGCATCGTGCACTGATC+AGG | - | chr3_4:16357125-16357144 | None:intergenic | 50.0% |
| ACTAGGCATCCCACTTGTCA+AGG | + | chr3_4:16357461-16357480 | Msa0492550:intron | 50.0% | |
| ACTCCTTGACGTGGACTTGA+GGG | + | chr3_4:16357633-16357652 | Msa0492550:intron | 50.0% | |
| ! | GTGGACTTGAGGGAGGTTTT+AGG | + | chr3_4:16357643-16357662 | Msa0492550:intron | 50.0% |
| TTCATTGGATGCGTGACCTG+CGG | + | chr3_4:16357680-16357699 | Msa0492550:intron | 50.0% | |
| AATCCACAATACCCAACCGC+AGG | - | chr3_4:16357699-16357718 | None:intergenic | 50.0% | |
| ! | AGTCGCTAGTTTCGCTAGAG+TGG | + | chr3_4:16357869-16357888 | Msa0492550:intron | 50.0% |
| GGAAGAGCTCAAGGGATGTT+TGG | + | chr3_4:16358367-16358386 | Msa0492550:CDS | 50.0% | |
| ATCCCTTGAGCTCTACCGAC+AGG | - | chr3_4:16349178-16349197 | None:intergenic | 55.0% | |
| ! | CCGGCGTGTTTAGGTTTGCT+AGG | + | chr3_4:16349347-16349366 | Msa0492550:CDS | 55.0% |
| GGATATCGAAAGCCACGACG+TGG | - | chr3_4:16351933-16351952 | None:intergenic | 55.0% | |
| GTGGCTTTCGATATCCCGCT+AGG | + | chr3_4:16351937-16351956 | Msa0492550:intron | 55.0% | |
| GCTTTCGATATCCCGCTAGG+TGG | + | chr3_4:16351940-16351959 | Msa0492550:intron | 55.0% | |
| TCCCGCTAGGTGGATACGAA+AGG | + | chr3_4:16351950-16351969 | Msa0492550:intron | 55.0% | |
| CGAAAGGTTCCCGACCTAAG+GGG | + | chr3_4:16351966-16351985 | Msa0492550:intron | 55.0% | |
| GGGGAACAGTTTAAGCCGCA+AGG | + | chr3_4:16351985-16352004 | Msa0492550:intron | 55.0% | |
| ACTAGGATGGGTGACCTACC+AGG | + | chr3_4:16352204-16352223 | Msa0492550:intron | 55.0% | |
| TCCCGGTAAGCATGTGAGTG+AGG | + | chr3_4:16352232-16352251 | Msa0492550:intron | 55.0% | |
| CGGCAATCCTGTAAGCAGTC+TGG | + | chr3_4:16352298-16352317 | Msa0492550:intron | 55.0% | |
| AGAGCAGACCTCTCCCAGTA+CGG | + | chr3_4:16352339-16352358 | Msa0492550:intron | 55.0% | |
| TCTCCCAGTACGGTGTGGTT+CGG | + | chr3_4:16352349-16352368 | Msa0492550:intron | 55.0% | |
| GGATATCGAAAGCCACGACG+TGG | - | chr3_4:16351933-16351952 | None:intergenic | 55.0% | |
| GTGGCTTTCGATATCCCGCT+AGG | + | chr3_4:16351937-16351956 | Msa0492550:intron | 55.0% | |
| GCTTTCGATATCCCGCTAGG+TGG | + | chr3_4:16351940-16351959 | Msa0492550:intron | 55.0% | |
| TCCCGCTAGGTGGATACGAA+AGG | + | chr3_4:16351950-16351969 | Msa0492550:intron | 55.0% | |
| CGAAAGGTTCCCGACCTAAG+GGG | + | chr3_4:16351966-16351985 | Msa0492550:intron | 55.0% | |
| CGGCTTAAACCGTTCCCCTT+AGG | - | chr3_4:16352461-16352480 | None:intergenic | 55.0% | |
| GGGAACGGTTTAAGCCGCAA+GGG | + | chr3_4:16352464-16352483 | Msa0492550:intron | 55.0% | |
| CCGAAACACGTCGGAATGAG+AGG | + | chr3_4:16352509-16352528 | Msa0492550:intron | 55.0% | |
| ACGTCGGAATGAGAGGGATC+CGG | + | chr3_4:16352516-16352535 | Msa0492550:intron | 55.0% | |
| ACTAGGATGGGTGACCTACC+GGG | + | chr3_4:16352204-16352223 | Msa0492550:intron | 55.0% | |
| TGACCTACCGGGAAGTTTCC+CGG | + | chr3_4:16352693-16352712 | Msa0492550:intron | 55.0% | |
| TTACCGGGAAACTTCCCGGT+AGG | - | chr3_4:16352699-16352718 | None:intergenic | 55.0% | |
| TCCCGGTAAGCATGTGAGTG+AGG | + | chr3_4:16352232-16352251 | Msa0492550:intron | 55.0% | |
| CGGCAATCCTGTAAGCAGTC+TGG | + | chr3_4:16352298-16352317 | Msa0492550:intron | 55.0% | |
| !! | TGCTCTTGGGGCACTGGTTA+AGG | - | chr3_4:16354155-16354174 | None:intergenic | 55.0% |
| GGTTCCTGCCTTAATCACCG+CGG | + | chr3_4:16355528-16355547 | Msa0492550:intron | 55.0% | |
| TCATCCGCGGTGATTAAGGC+AGG | - | chr3_4:16355535-16355554 | None:intergenic | 55.0% | |
| CAAACATGCAGCTCCCATGC+CGG | + | chr3_4:16355594-16355613 | Msa0492550:intron | 55.0% | |
| AAACATGCAGCTCCCATGCC+GGG | + | chr3_4:16355595-16355614 | Msa0492550:intron | 55.0% | |
| AGCCAAGGATGGTCCCAGAT+TGG | - | chr3_4:16356695-16356714 | None:intergenic | 55.0% | |
| CGCGCAGCATTACAAAGCCA+AGG | - | chr3_4:16356710-16356729 | None:intergenic | 55.0% | |
| CCACTCCAAATGTGGAGGAG+TGG | - | chr3_4:16356744-16356763 | None:intergenic | 55.0% | |
| CCACTCCTCCACATTTGGAG+TGG | + | chr3_4:16356741-16356760 | Msa0492550:intron | 55.0% | |
| TGTGGCCACTCCAAATGTGG+AGG | - | chr3_4:16356749-16356768 | None:intergenic | 55.0% | |
| ! | GTTGACTCCACTCCTTGACG+TGG | + | chr3_4:16357624-16357643 | Msa0492550:intron | 55.0% |
| CTCAAGTCCACGTCAAGGAG+TGG | - | chr3_4:16357634-16357653 | None:intergenic | 55.0% | |
| CACTCCTTGACGTGGACTTG+AGG | + | chr3_4:16357632-16357651 | Msa0492550:intron | 55.0% | |
| ! | TGACCTGCGGTTGGGTATTG+TGG | + | chr3_4:16357693-16357712 | Msa0492550:intron | 55.0% |
| CTGCCTATTGTTGGCGGCAC+CGG | + | chr3_4:16349328-16349347 | Msa0492550:CDS | 60.0% | |
| ATTGTCGTGGGGGTCCCTTG+CGG | - | chr3_4:16352003-16352022 | None:intergenic | 60.0% | |
| GGGACCCCCACGACAATAGT+AGG | + | chr3_4:16352006-16352025 | Msa0492550:intron | 60.0% | |
| TCGGAATGAGAGGGATCCGG+AGG | + | chr3_4:16352041-16352060 | Msa0492550:intron | 60.0% | |
| ATCCGGAGGCCGTGTAGGTA+TGG | + | chr3_4:16352055-16352074 | Msa0492550:intron | 60.0% | |
| TCCGGAGGCCGTGTAGGTAT+GGG | + | chr3_4:16352056-16352075 | Msa0492550:intron | 60.0% | |
| TCCCATACCTACACGGCCTC+CGG | - | chr3_4:16352060-16352079 | None:intergenic | 60.0% | |
| AGACCTCTCCCAGTACGGTG+TGG | + | chr3_4:16352344-16352363 | Msa0492550:intron | 60.0% | |
| GAACCACACCGTACTGGGAG+AGG | - | chr3_4:16352350-16352369 | None:intergenic | 60.0% | |
| CTCCCAGTACGGTGTGGTTC+GGG | + | chr3_4:16352350-16352369 | Msa0492550:intron | 60.0% | |
| TCCCAGTACGGTGTGGTTCG+GGG | + | chr3_4:16352351-16352370 | Msa0492550:intron | 60.0% | |
| TCCCCGAACCACACCGTACT+GGG | - | chr3_4:16352355-16352374 | None:intergenic | 60.0% | |
| GGCATGTAACACCCACGTCG+TGG | + | chr3_4:16352396-16352415 | Msa0492550:intron | 60.0% | |
| GGTTCCCGACCTAAGGGGAA+CGG | + | chr3_4:16351971-16351990 | Msa0492550:intron | 60.0% | |
| GGGGAACGGTTTAAGCCGCA+AGG | + | chr3_4:16352463-16352482 | Msa0492550:intron | 60.0% | |
| ATTGTCGTGGGGGTCCCTTG+CGG | - | chr3_4:16352003-16352022 | None:intergenic | 60.0% | |
| TCGGAATGAGAGGGATCCGG+AGG | + | chr3_4:16352041-16352060 | Msa0492550:intron | 60.0% | |
| ATCCGGAGGCCGTGTAGGTA+TGG | + | chr3_4:16352055-16352074 | Msa0492550:intron | 60.0% | |
| TCCGGAGGCCGTGTAGGTAT+GGG | + | chr3_4:16352056-16352075 | Msa0492550:intron | 60.0% | |
| TCCCATACCTACACGGCCTC+CGG | - | chr3_4:16352060-16352079 | None:intergenic | 60.0% | |
| ! | AACCAGTGCCCCAAGAGCAC+TGG | + | chr3_4:16354156-16354175 | Msa0492550:intron | 60.0% |
| AACCAGTGCTCTTGGGGCAC+TGG | - | chr3_4:16354161-16354180 | None:intergenic | 60.0% | |
| TTCCATGCGGCAGCCACACA+AGG | + | chr3_4:16355363-16355382 | Msa0492550:intron | 60.0% | |
| GCCGACCACTCCTCCACATT+TGG | + | chr3_4:16356736-16356755 | Msa0492550:intron | 60.0% | |
| CCTCCCTCAAGTCCACGTCA+AGG | - | chr3_4:16357639-16357658 | None:intergenic | 60.0% | |
| CCTTGACGTGGACTTGAGGG+AGG | + | chr3_4:16357636-16357655 | Msa0492550:intron | 60.0% | |
| TTGGATGCGTGACCTGCGGT+TGG | + | chr3_4:16357684-16357703 | Msa0492550:intron | 60.0% | |
| TGGATGCGTGACCTGCGGTT+GGG | + | chr3_4:16357685-16357704 | Msa0492550:intron | 60.0% | |
| !! | ACGCCGGTGCCGCCAACAAT+AGG | - | chr3_4:16349334-16349353 | None:intergenic | 65.0% |
| !! | TTGGCGGCACCGGCGTGTTT+AGG | + | chr3_4:16349338-16349357 | Msa0492550:CDS | 65.0% |
| GTCCCCGAACCACACCGTAC+TGG | - | chr3_4:16352356-16352375 | None:intergenic | 65.0% | |
| ! | GTGTGGTTCGGGGACGAACC+AGG | + | chr3_4:16352361-16352380 | Msa0492550:intron | 65.0% |
| ! | TGGTTCGGGGACGAACCAGG+CGG | + | chr3_4:16352364-16352383 | Msa0492550:intron | 65.0% |
| ACGAACCAGGCGGAAGCTGG+TGG | + | chr3_4:16352374-16352393 | Msa0492550:intron | 65.0% | |
| CGAACCAGGCGGAAGCTGGT+GGG | + | chr3_4:16352375-16352394 | Msa0492550:intron | 65.0% | |
| AACCAGTGCCTCCGGGACAC+CGG | - | chr3_4:16354031-16354050 | None:intergenic | 65.0% | |
| CTCCTTGTGTGGCTGCCGCA+TGG | - | chr3_4:16355368-16355387 | None:intergenic | 65.0% | |
| GAGGGATCCGGAGGCCGTGT+AGG | + | chr3_4:16352050-16352069 | Msa0492550:intron | 70.0% | |
| GGGACGAACCAGGCGGAAGC+TGG | + | chr3_4:16352371-16352390 | Msa0492550:intron | 70.0% | |
| CATGCCCACCAGCTTCCGCC+TGG | - | chr3_4:16352382-16352401 | None:intergenic | 70.0% | |
| GAGGGATCCGGAGGCCGTGT+AGG | + | chr3_4:16352050-16352069 | Msa0492550:intron | 70.0% | |
| ! | AACCGGTGTCCCGGAGGCAC+TGG | + | chr3_4:16354026-16354045 | Msa0492550:intron | 70.0% |
| CATGCAGCTCCCATGCCGGG+TGG | + | chr3_4:16355598-16355617 | Msa0492550:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 16348893 | 16358642 | 16348893 | ID=Msa0492550;Name=Msa0492550 |
| chr3_4 | mRNA | 16348893 | 16358642 | 16348893 | ID=Msa0492550-mRNA-1;Parent=Msa0492550;Name=Msa0492550-mRNA-1;_AED=0.33;_eAED=0.34;_QI=0|0|0|1|0|0.5|2|0|375 |
| chr3_4 | exon | 16348893 | 16349428 | 16348893 | ID=Msa0492550-mRNA-1:exon:4719;Parent=Msa0492550-mRNA-1 |
| chr3_4 | exon | 16358051 | 16358642 | 16358051 | ID=Msa0492550-mRNA-1:exon:4720;Parent=Msa0492550-mRNA-1 |
| chr3_4 | CDS | 16348893 | 16349428 | 16348893 | ID=Msa0492550-mRNA-1:cds;Parent=Msa0492550-mRNA-1 |
| chr3_4 | CDS | 16358051 | 16358642 | 16358051 | ID=Msa0492550-mRNA-1:cds;Parent=Msa0492550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
