Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0345410 | XP_039688244.1 | 96.257 | 187 | 7 | 0 | 1 | 187 | 1 | 187 | 2.84e-130 | 373 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0345410 | sp|Q9SS03|DIR21_ARATH | 47.826 | 161 | 80 | 1 | 30 | 186 | 29 | 189 | 1.65e-45 | 151 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0345410 | A0A396IK46 | 96.257 | 187 | 7 | 0 | 1 | 187 | 1 | 187 | 1.35e-130 | 373 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003700 | Msa0345410 | 0.826034 | 3.385049e-54 | -8.615850e-47 |
Msa0016670 | Msa0345410 | 0.811655 | 6.281033e-51 | -8.615850e-47 |
Msa0017510 | Msa0345410 | 0.841457 | 4.697372e-58 | -8.615850e-47 |
Msa0018000 | Msa0345410 | 0.838443 | 2.866469e-57 | -8.615850e-47 |
Msa0024550 | Msa0345410 | 0.834470 | 2.942106e-56 | -8.615850e-47 |
Msa0028420 | Msa0345410 | 0.800032 | 1.743414e-48 | -8.615850e-47 |
Msa0028640 | Msa0345410 | 0.803130 | 4.037635e-49 | -8.615850e-47 |
Msa0036130 | Msa0345410 | 0.829416 | 5.211087e-55 | -8.615850e-47 |
Msa0046100 | Msa0345410 | 0.835446 | 1.670123e-56 | -8.615850e-47 |
Msa0049790 | Msa0345410 | 0.800995 | 1.109387e-48 | -8.615850e-47 |
Msa0050390 | Msa0345410 | 0.819065 | 1.412598e-52 | -8.615850e-47 |
Msa0061340 | Msa0345410 | 0.820013 | 8.581888e-53 | -8.615850e-47 |
Msa0063890 | Msa0345410 | 0.800484 | 1.410660e-48 | -8.615850e-47 |
Msa0074240 | Msa0345410 | 0.822284 | 2.572507e-53 | -8.615850e-47 |
Msa0076250 | Msa0345410 | 0.830611 | 2.664457e-55 | -8.615850e-47 |
Msa0081360 | Msa0345410 | 0.837429 | 5.225630e-57 | -8.615850e-47 |
Msa0081480 | Msa0345410 | 0.833316 | 5.719398e-56 | -8.615850e-47 |
Msa0081520 | Msa0345410 | 0.830626 | 2.640883e-55 | -8.615850e-47 |
Msa0089630 | Msa0345410 | 0.831059 | 2.069204e-55 | -8.615850e-47 |
Msa0091600 | Msa0345410 | 0.809692 | 1.668777e-50 | -8.615850e-47 |
Msa0094850 | Msa0345410 | 0.832315 | 1.014064e-55 | -8.615850e-47 |
Msa0101440 | Msa0345410 | 0.802312 | 5.956860e-49 | -8.615850e-47 |
Msa0110970 | Msa0345410 | 0.845959 | 2.932759e-59 | -8.615850e-47 |
Msa0112570 | Msa0345410 | 0.804201 | 2.420265e-49 | -8.615850e-47 |
Msa0114540 | Msa0345410 | -0.812727 | 3.665560e-51 | -8.615850e-47 |
Msa0115160 | Msa0345410 | 0.825993 | 3.461807e-54 | -8.615850e-47 |
Msa0118570 | Msa0345410 | 0.826096 | 3.271223e-54 | -8.615850e-47 |
Msa0120400 | Msa0345410 | 0.840154 | 1.031725e-57 | -8.615850e-47 |
Msa0123100 | Msa0345410 | 0.805027 | 1.627757e-49 | -8.615850e-47 |
Msa0124060 | Msa0345410 | 0.806754 | 7.054238e-50 | -8.615850e-47 |
Msa0130240 | Msa0345410 | 0.817582 | 3.059855e-52 | -8.615850e-47 |
Msa0130570 | Msa0345410 | 0.804495 | 2.101796e-49 | -8.615850e-47 |
Msa0144360 | Msa0345410 | 0.824515 | 7.742011e-54 | -8.615850e-47 |
Msa0146260 | Msa0345410 | 0.822719 | 2.037621e-53 | -8.615850e-47 |
Msa0152400 | Msa0345410 | 0.826010 | 3.429529e-54 | -8.615850e-47 |
Msa0157290 | Msa0345410 | 0.842409 | 2.632399e-58 | -8.615850e-47 |
Msa0164330 | Msa0345410 | 0.811594 | 6.474490e-51 | -8.615850e-47 |
Msa0166560 | Msa0345410 | 0.837089 | 6.385602e-57 | -8.615850e-47 |
Msa0168500 | Msa0345410 | 0.822890 | 1.859638e-53 | -8.615850e-47 |
Msa0169860 | Msa0345410 | 0.820611 | 6.260544e-53 | -8.615850e-47 |
Msa0173890 | Msa0345410 | 0.835712 | 1.430276e-56 | -8.615850e-47 |
Msa0182680 | Msa0345410 | 0.806961 | 6.379629e-50 | -8.615850e-47 |
Msa0188150 | Msa0345410 | 0.811378 | 7.213051e-51 | -8.615850e-47 |
Msa0197420 | Msa0345410 | 0.820047 | 8.429758e-53 | -8.615850e-47 |
Msa0197930 | Msa0345410 | 0.806356 | 8.558239e-50 | -8.615850e-47 |
Msa0215320 | Msa0345410 | -0.816893 | 4.373341e-52 | -8.615850e-47 |
Msa0221290 | Msa0345410 | 0.823666 | 1.224811e-53 | -8.615850e-47 |
Msa0239030 | Msa0345410 | 0.808292 | 3.327298e-50 | -8.615850e-47 |
Msa0247940 | Msa0345410 | 0.801113 | 1.049571e-48 | -8.615850e-47 |
Msa0261340 | Msa0345410 | 0.808085 | 3.683673e-50 | -8.615850e-47 |
Msa0276740 | Msa0345410 | 0.807804 | 4.227201e-50 | -8.615850e-47 |
Msa0277180 | Msa0345410 | 0.816158 | 6.386948e-52 | -8.615850e-47 |
Msa0277450 | Msa0345410 | 0.811398 | 7.141600e-51 | -8.615850e-47 |
Msa0287650 | Msa0345410 | 0.803756 | 2.994338e-49 | -8.615850e-47 |
Msa0292400 | Msa0345410 | 0.845569 | 3.742122e-59 | -8.615850e-47 |
Msa0294560 | Msa0345410 | -0.806873 | 6.657259e-50 | -8.615850e-47 |
Msa0297740 | Msa0345410 | 0.801843 | 7.437071e-49 | -8.615850e-47 |
Msa0297790 | Msa0345410 | 0.815446 | 9.206377e-52 | -8.615850e-47 |
Msa0300270 | Msa0345410 | 0.827366 | 1.627449e-54 | -8.615850e-47 |
Msa0300320 | Msa0345410 | 0.832966 | 6.988878e-56 | -8.615850e-47 |
Msa0300690 | Msa0345410 | 0.856205 | 3.765666e-62 | -8.615850e-47 |
Msa0316680 | Msa0345410 | 0.806683 | 7.302892e-50 | -8.615850e-47 |
Msa0316810 | Msa0345410 | 0.829607 | 4.681867e-55 | -8.615850e-47 |
Msa0317280 | Msa0345410 | 0.811279 | 7.578885e-51 | -8.615850e-47 |
Msa0334040 | Msa0345410 | 0.804980 | 1.665064e-49 | -8.615850e-47 |
Msa0335800 | Msa0345410 | 0.815609 | 8.468430e-52 | -8.615850e-47 |
Msa0339500 | Msa0345410 | 0.829183 | 5.936101e-55 | -8.615850e-47 |
Msa0344570 | Msa0345410 | 0.804887 | 1.741268e-49 | -8.615850e-47 |
Msa0345330 | Msa0345410 | 0.994770 | 4.680487e-210 | -8.615850e-47 |
Msa0345410 | Msa0348880 | 0.803062 | 4.170543e-49 | -8.615850e-47 |
Msa0345410 | Msa0350620 | 0.849892 | 2.415293e-60 | -8.615850e-47 |
Msa0345410 | Msa0362780 | 0.801475 | 8.849858e-49 | -8.615850e-47 |
Msa0345410 | Msa0363070 | 0.802472 | 5.519082e-49 | -8.615850e-47 |
Msa0345410 | Msa0378720 | 0.823187 | 1.585382e-53 | -8.615850e-47 |
Msa0345410 | Msa0385390 | 0.855407 | 6.441765e-62 | -8.615850e-47 |
Msa0345410 | Msa0392420 | 0.820553 | 6.454367e-53 | -8.615850e-47 |
Msa0345410 | Msa0392460 | 0.816639 | 4.984171e-52 | -8.615850e-47 |
Msa0345410 | Msa0392490 | 0.817499 | 3.194385e-52 | -8.615850e-47 |
Msa0345410 | Msa0395790 | 0.810995 | 8.735222e-51 | -8.615850e-47 |
Msa0345410 | Msa0410500 | 0.825356 | 4.902575e-54 | -8.615850e-47 |
Msa0345410 | Msa0410650 | 0.808645 | 2.797482e-50 | -8.615850e-47 |
Msa0345410 | Msa0415320 | 0.837848 | 4.079499e-57 | -8.615850e-47 |
Msa0345410 | Msa0417880 | 0.810332 | 1.214832e-50 | -8.615850e-47 |
Msa0345410 | Msa0418190 | 0.820549 | 6.469524e-53 | -8.615850e-47 |
Msa0345410 | Msa0422850 | 0.826764 | 2.268256e-54 | -8.615850e-47 |
Msa0345410 | Msa0422930 | 0.824577 | 7.483931e-54 | -8.615850e-47 |
Msa0345410 | Msa0440650 | 0.804339 | 2.265156e-49 | -8.615850e-47 |
Msa0345410 | Msa0443310 | 0.812733 | 3.654081e-51 | -8.615850e-47 |
Msa0345410 | Msa0445110 | 0.892805 | 1.130602e-74 | -8.615850e-47 |
Msa0345410 | Msa0447370 | 0.821892 | 3.170992e-53 | -8.615850e-47 |
Msa0345410 | Msa0450720 | 0.812852 | 3.440952e-51 | -8.615850e-47 |
Msa0345410 | Msa0461720 | 0.820081 | 8.280317e-53 | -8.615850e-47 |
Msa0345410 | Msa0464260 | 0.825881 | 3.681089e-54 | -8.615850e-47 |
Msa0345410 | Msa0464680 | 0.807243 | 5.560401e-50 | -8.615850e-47 |
Msa0345410 | Msa0467430 | 0.821340 | 4.252834e-53 | -8.615850e-47 |
Msa0345410 | Msa0469030 | 0.801629 | 8.228930e-49 | -8.615850e-47 |
Msa0345410 | Msa0474730 | 0.807058 | 6.084810e-50 | -8.615850e-47 |
Msa0345410 | Msa0475790 | 0.822455 | 2.347753e-53 | -8.615850e-47 |
Msa0345410 | Msa0479540 | 0.826299 | 2.927518e-54 | -8.615850e-47 |
Msa0345410 | Msa0487570 | 0.817355 | 3.442121e-52 | -8.615850e-47 |
Msa0345410 | Msa0487630 | 0.824756 | 6.793090e-54 | -8.615850e-47 |
Msa0345410 | Msa0492550 | 0.893287 | 7.234175e-75 | -8.615850e-47 |
Msa0345410 | Msa0498060 | 0.811821 | 5.780753e-51 | -8.615850e-47 |
Msa0345410 | Msa0498450 | 0.810867 | 9.309667e-51 | -8.615850e-47 |
Msa0345410 | Msa0503590 | 0.830029 | 3.695807e-55 | -8.615850e-47 |
Msa0345410 | Msa0507680 | 0.806310 | 8.754542e-50 | -8.615850e-47 |
Msa0345410 | Msa0509610 | 0.800162 | 1.640289e-48 | -8.615850e-47 |
Msa0345410 | Msa0512230 | 0.801898 | 7.245453e-49 | -8.615850e-47 |
Msa0345410 | Msa0513160 | 0.831477 | 1.632495e-55 | -8.615850e-47 |
Msa0345410 | Msa0523000 | 0.821579 | 3.745834e-53 | -8.615850e-47 |
Msa0345410 | Msa0527550 | 0.812131 | 4.947172e-51 | -8.615850e-47 |
Msa0345410 | Msa0527860 | 0.818157 | 2.268795e-52 | -8.615850e-47 |
Msa0345410 | Msa0535040 | 0.844687 | 6.478972e-59 | -8.615850e-47 |
Msa0345410 | Msa0547230 | 0.804372 | 2.229666e-49 | -8.615850e-47 |
Msa0345410 | Msa0574890 | 0.839517 | 1.511690e-57 | -8.615850e-47 |
Msa0345410 | Msa0582450 | 0.809415 | 1.913378e-50 | -8.615850e-47 |
Msa0345410 | Msa0586190 | 0.809066 | 2.273798e-50 | -8.615850e-47 |
Msa0345410 | Msa0594660 | 0.822180 | 2.718399e-53 | -8.615850e-47 |
Msa0345410 | Msa0614000 | 0.818248 | 2.164810e-52 | -8.615850e-47 |
Msa0345410 | Msa0623330 | 0.823183 | 1.588470e-53 | -8.615850e-47 |
Msa0345410 | Msa0626450 | 0.816213 | 6.209218e-52 | -8.615850e-47 |
Msa0345410 | Msa0626490 | 0.816728 | 4.761016e-52 | -8.615850e-47 |
Msa0345410 | Msa0626510 | 0.846643 | 1.909392e-59 | -8.615850e-47 |
Msa0345410 | Msa0638480 | 0.844572 | 6.958536e-59 | -8.615850e-47 |
Msa0345410 | Msa0642880 | 0.801377 | 9.268496e-49 | -8.615850e-47 |
Msa0345410 | Msa0663300 | 0.805000 | 1.649018e-49 | -8.615850e-47 |
Msa0345410 | Msa0664600 | 0.816417 | 5.588828e-52 | -8.615850e-47 |
Msa0345410 | Msa0664910 | 0.844660 | 6.586804e-59 | -8.615850e-47 |
Msa0345410 | Msa0683570 | 0.825703 | 4.057132e-54 | -8.615850e-47 |
Msa0345410 | Msa0684500 | 0.808460 | 3.063936e-50 | -8.615850e-47 |
Msa0345410 | Msa0686560 | 0.805191 | 1.503787e-49 | -8.615850e-47 |
Msa0345410 | Msa0688770 | 0.804948 | 1.690319e-49 | -8.615850e-47 |
Msa0345410 | Msa0697160 | 0.804400 | 2.200068e-49 | -8.615850e-47 |
Msa0345410 | Msa0701280 | 0.810979 | 8.802441e-51 | -8.615850e-47 |
Msa0345410 | Msa0702340 | 0.815234 | 1.026050e-51 | -8.615850e-47 |
Msa0345410 | Msa0702350 | 0.824122 | 9.578870e-54 | -8.615850e-47 |
Msa0345410 | Msa0702570 | 0.814762 | 1.305845e-51 | -8.615850e-47 |
Msa0345410 | Msa0702590 | 0.817302 | 3.538326e-52 | -8.615850e-47 |
Msa0345410 | Msa0702660 | 0.816128 | 6.487189e-52 | -8.615850e-47 |
Msa0345410 | Msa0702680 | 0.812684 | 3.745010e-51 | -8.615850e-47 |
Msa0345410 | Msa0710800 | 0.802219 | 6.223767e-49 | -8.615850e-47 |
Msa0345410 | Msa0738040 | 0.824043 | 9.995598e-54 | -8.615850e-47 |
Msa0345410 | Msa0756460 | 0.801245 | 9.862466e-49 | -8.615850e-47 |
Msa0345410 | Msa0769180 | 0.818015 | 2.443604e-52 | -8.615850e-47 |
Msa0345410 | Msa0777570 | -0.805151 | 1.533042e-49 | -8.615850e-47 |
Msa0345410 | Msa0785210 | 0.848157 | 7.330814e-60 | -8.615850e-47 |
Msa0345410 | Msa0826130 | 0.823951 | 1.050683e-53 | -8.615850e-47 |
Msa0345410 | Msa0828560 | 0.827540 | 1.478409e-54 | -8.615850e-47 |
Msa0345410 | Msa0843220 | 0.830594 | 2.689362e-55 | -8.615850e-47 |
Msa0345410 | Msa0861510 | 0.837031 | 6.606725e-57 | -8.615850e-47 |
Msa0345410 | Msa0861530 | 0.823783 | 1.149862e-53 | -8.615850e-47 |
Msa0345410 | Msa0861600 | 0.830454 | 2.909727e-55 | -8.615850e-47 |
Msa0345410 | Msa0861870 | 0.803882 | 2.819407e-49 | -8.615850e-47 |
Msa0345410 | Msa0880140 | 0.837635 | 4.626203e-57 | -8.615850e-47 |
Msa0345410 | Msa0883060 | 0.801497 | 8.757276e-49 | -8.615850e-47 |
Msa0345410 | Msa0895790 | 0.806509 | 7.948896e-50 | -8.615850e-47 |
Msa0345410 | Msa0896970 | 0.860005 | 2.792144e-63 | -8.615850e-47 |
Msa0345410 | Msa0908050 | 0.808479 | 3.035778e-50 | -8.615850e-47 |
Msa0345410 | Msa0910430 | 0.819827 | 9.467789e-53 | -8.615850e-47 |
Msa0345410 | Msa0930780 | 0.829266 | 5.666802e-55 | -8.615850e-47 |
Msa0345410 | Msa0934890 | 0.805406 | 1.355665e-49 | -8.615850e-47 |
Msa0345410 | Msa0936340 | 0.828748 | 7.565897e-55 | -8.615850e-47 |
Msa0345410 | Msa0948290 | 0.838187 | 3.337146e-57 | -8.615850e-47 |
Msa0345410 | Msa0967380 | 0.854495 | 1.184737e-61 | -8.615850e-47 |
Msa0345410 | Msa0980340 | 0.801334 | 9.455185e-49 | -8.615850e-47 |
Msa0345410 | Msa0996960 | 0.814893 | 1.221497e-51 | -8.615850e-47 |
Msa0345410 | Msa1003030 | 0.832097 | 1.148264e-55 | -8.615850e-47 |
Msa0345410 | Msa1005870 | 0.844870 | 5.782673e-59 | -8.615850e-47 |
Msa0345410 | Msa1019430 | 0.819318 | 1.236720e-52 | -8.615850e-47 |
Msa0345410 | Msa1019470 | 0.813696 | 2.246054e-51 | -8.615850e-47 |
Msa0345410 | Msa1020510 | 0.804577 | 2.020968e-49 | -8.615850e-47 |
Msa0345410 | Msa1031930 | 0.820284 | 7.439108e-53 | -8.615850e-47 |
Msa0345410 | Msa1043370 | 0.816403 | 5.630939e-52 | -8.615850e-47 |
Msa0345410 | Msa1047980 | 0.824930 | 6.181229e-54 | -8.615850e-47 |
Msa0345410 | Msa1048920 | 0.810977 | 8.813516e-51 | -8.615850e-47 |
Msa0345410 | Msa1051830 | 0.812883 | 3.388473e-51 | -8.615850e-47 |
Msa0345410 | Msa1066490 | 0.829195 | 5.897288e-55 | -8.615850e-47 |
Msa0345410 | Msa1079230 | 0.809715 | 1.650219e-50 | -8.615850e-47 |
Msa0345410 | Msa1085200 | 0.804172 | 2.454484e-49 | -8.615850e-47 |
Msa0345410 | Msa1092010 | 0.844623 | 6.743255e-59 | -8.615850e-47 |
Msa0345410 | Msa1093840 | 0.802123 | 6.514694e-49 | -8.615850e-47 |
Msa0345410 | Msa1123380 | 0.824128 | 9.544212e-54 | -8.615850e-47 |
Msa0345410 | Msa1124110 | 0.818302 | 2.104080e-52 | -8.615850e-47 |
Msa0345410 | Msa1125000 | 0.809566 | 1.775946e-50 | -8.615850e-47 |
Msa0345410 | Msa1137570 | 0.818221 | 2.194754e-52 | -8.615850e-47 |
Msa0345410 | Msa1139810 | 0.803229 | 3.851045e-49 | -8.615850e-47 |
Msa0345410 | Msa1157870 | 0.818934 | 1.512433e-52 | -8.615850e-47 |
Msa0345410 | Msa1163650 | -0.803873 | 2.831616e-49 | -8.615850e-47 |
Msa0345410 | Msa1168950 | 0.810285 | 1.243499e-50 | -8.615850e-47 |
Msa0345410 | Msa1169040 | 0.808806 | 2.584876e-50 | -8.615850e-47 |
Msa0345410 | Msa1178180 | 0.812256 | 4.645270e-51 | -8.615850e-47 |
Msa0345410 | Msa1182770 | 0.800902 | 1.158893e-48 | -8.615850e-47 |
Msa0345410 | Msa1190400 | 0.803093 | 4.109753e-49 | -8.615850e-47 |
Msa0345410 | Msa1193290 | 0.826517 | 2.597394e-54 | -8.615850e-47 |
Msa0345410 | Msa1202190 | 0.805696 | 1.178675e-49 | -8.615850e-47 |
Msa0345410 | Msa1208160 | 0.838562 | 2.672002e-57 | -8.615850e-47 |
Msa0345410 | Msa1208430 | 0.832998 | 6.863547e-56 | -8.615850e-47 |
Msa0345410 | Msa1209460 | 0.821746 | 3.427095e-53 | -8.615850e-47 |
Msa0345410 | Msa1221060 | 0.811188 | 7.931420e-51 | -8.615850e-47 |
Msa0345410 | Msa1222970 | 0.800793 | 1.219833e-48 | -8.615850e-47 |
Msa0345410 | Msa1224830 | 0.817313 | 3.518287e-52 | -8.615850e-47 |
Msa0345410 | Msa1224840 | 0.813877 | 2.048870e-51 | -8.615850e-47 |
Msa0345410 | Msa1231820 | 0.808585 | 2.881810e-50 | -8.615850e-47 |
Msa0345410 | Msa1236100 | 0.838770 | 2.360802e-57 | -8.615850e-47 |
Msa0345410 | Msa1236410 | 0.807281 | 5.457224e-50 | -8.615850e-47 |
Msa0345410 | Msa1238930 | 0.811117 | 8.216902e-51 | -8.615850e-47 |
Msa0345410 | Msa1242230 | 0.808713 | 2.704770e-50 | -8.615850e-47 |
Msa0345410 | Msa1242240 | 0.816709 | 4.808153e-52 | -8.615850e-47 |
Msa0345410 | Msa1251750 | 0.800307 | 1.532476e-48 | -8.615850e-47 |
Msa0345410 | Msa1264710 | 0.824381 | 8.323544e-54 | -8.615850e-47 |
Msa0345410 | Msa1267900 | 0.808529 | 2.962247e-50 | -8.615850e-47 |
Msa0345410 | Msa1269820 | 0.913985 | 3.258191e-84 | -8.615850e-47 |
Msa0345410 | Msa1274060 | 0.808689 | 2.736922e-50 | -8.615850e-47 |
Msa0345410 | Msa1274520 | 0.816073 | 6.671997e-52 | -8.615850e-47 |
Msa0345410 | Msa1276660 | 0.834487 | 2.912933e-56 | -8.615850e-47 |
Msa0345410 | Msa1277490 | 0.811577 | 6.530901e-51 | -8.615850e-47 |
Msa0345410 | Msa1283840 | 0.826105 | 3.255937e-54 | -8.615850e-47 |
Msa0345410 | Msa1284260 | 0.837196 | 5.995204e-57 | -8.615850e-47 |
Msa0345410 | Msa1292340 | 0.806099 | 9.694591e-50 | -8.615850e-47 |
Msa0345410 | Msa1298370 | 0.835721 | 1.423340e-56 | -8.615850e-47 |
Msa0345410 | Msa1303240 | 0.815484 | 9.030560e-52 | -8.615850e-47 |
Msa0345410 | Msa1303250 | 0.830475 | 2.876967e-55 | -8.615850e-47 |
Msa0345410 | Msa1322860 | 0.827196 | 1.788051e-54 | -8.615850e-47 |
Msa0345410 | Msa1327050 | 0.836430 | 9.402676e-57 | -8.615850e-47 |
Msa0345410 | Msa1332000 | 0.803086 | 4.123082e-49 | -8.615850e-47 |
Msa0345410 | Msa1333480 | 0.801804 | 7.574004e-49 | -8.615850e-47 |
Msa0345410 | Msa1346370 | 0.833416 | 5.401564e-56 | -8.615850e-47 |
Msa0345410 | Msa1346420 | 0.807595 | 4.682010e-50 | -8.615850e-47 |
Msa0345410 | Msa1351760 | 0.817152 | 3.825082e-52 | -8.615850e-47 |
Msa0345410 | Msa1353470 | 0.800949 | 1.133528e-48 | -8.615850e-47 |
Msa0345410 | Msa1356830 | 0.815445 | 9.212315e-52 | -8.615850e-47 |
Msa0345410 | Msa1361400 | 0.816285 | 5.983745e-52 | -8.615850e-47 |
Msa0345410 | Msa1361410 | 0.800986 | 1.113855e-48 | -8.615850e-47 |
Msa0345410 | Msa1366340 | 0.823748 | 1.172118e-53 | -8.615850e-47 |
Msa0345410 | Msa1373100 | 0.813855 | 2.072044e-51 | -8.615850e-47 |
Msa0345410 | Msa1374040 | 0.824980 | 6.013374e-54 | -8.615850e-47 |
Msa0345410 | Msa1374550 | 0.847892 | 8.672341e-60 | -8.615850e-47 |
Msa0345410 | Msa1386690 | 0.810948 | 8.943840e-51 | -8.615850e-47 |
Msa0345410 | Msa1386710 | 0.817879 | 2.622145e-52 | -8.615850e-47 |
Msa0345410 | Msa1422950 | 0.813494 | 2.488204e-51 | -8.615850e-47 |
Msa0345410 | Msa1423350 | 0.809616 | 1.732580e-50 | -8.615850e-47 |
Msa0345410 | Msa1437940 | 0.820793 | 5.684704e-53 | -8.615850e-47 |
Msa0345410 | Msa1440880 | 0.814730 | 1.327326e-51 | -8.615850e-47 |
Msa0345410 | Msa1440960 | 0.805691 | 1.181477e-49 | -8.615850e-47 |
Msa0345410 | Msa1445190 | 0.832500 | 9.122277e-56 | -8.615850e-47 |
Msa0345410 | Msa1446810 | 0.826596 | 2.487103e-54 | -8.615850e-47 |
Msa0345410 | Msa1451160 | 0.804083 | 2.560786e-49 | -8.615850e-47 |
Msa0345410 | Msa1460020 | 0.801096 | 1.057780e-48 | -8.615850e-47 |
Msa0345410 | Msa1461300 | 0.831736 | 1.409715e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0345410 | MtrunA17_Chr3g0085291 | 96.257 | 187 | 7 | 0 | 1 | 187 | 1 | 187 | 2.61e-134 | 373 |
Msa0345410 | MtrunA17_Chr3g0085311 | 91.534 | 189 | 14 | 1 | 1 | 187 | 1 | 189 | 8.86e-127 | 354 |
Msa0345410 | MtrunA17_Chr3g0085301 | 65.079 | 189 | 64 | 2 | 1 | 187 | 6 | 194 | 1.38e-87 | 255 |
Msa0345410 | MtrunA17_Chr3g0085321 | 63.492 | 189 | 67 | 1 | 1 | 187 | 1 | 189 | 1.02e-85 | 250 |
Msa0345410 | MtrunA17_Chr4g0040551 | 61.878 | 181 | 62 | 2 | 8 | 186 | 9 | 184 | 2.65e-78 | 231 |
Msa0345410 | MtrunA17_Chr3g0090231 | 60.541 | 185 | 66 | 2 | 4 | 186 | 5 | 184 | 3.35e-77 | 229 |
Msa0345410 | MtrunA17_Chr1g0177051 | 46.739 | 184 | 89 | 4 | 10 | 186 | 4 | 185 | 1.61e-51 | 163 |
Msa0345410 | MtrunA17_Chr4g0005081 | 52.027 | 148 | 67 | 1 | 43 | 186 | 49 | 196 | 8.18e-48 | 154 |
Msa0345410 | MtrunA17_Chr4g0005071 | 50.000 | 148 | 70 | 1 | 43 | 186 | 48 | 195 | 3.03e-46 | 150 |
Msa0345410 | MtrunA17_Chr4g0005031 | 46.497 | 157 | 78 | 2 | 34 | 186 | 66 | 220 | 2.31e-43 | 144 |
Msa0345410 | MtrunA17_Chr7g0259091 | 50.336 | 149 | 69 | 2 | 43 | 186 | 45 | 193 | 6.57e-43 | 142 |
Msa0345410 | MtrunA17_Chr4g0005041 | 47.682 | 151 | 75 | 2 | 40 | 186 | 47 | 197 | 6.98e-43 | 142 |
Msa0345410 | MtrunA17_Chr1g0175911 | 44.022 | 184 | 96 | 4 | 8 | 186 | 10 | 191 | 3.12e-42 | 140 |
Msa0345410 | MtrunA17_Chr7g0243501 | 43.011 | 186 | 98 | 3 | 7 | 186 | 8 | 191 | 3.19e-42 | 140 |
Msa0345410 | MtrunA17_Chr7g0259071 | 47.651 | 149 | 73 | 2 | 43 | 186 | 42 | 190 | 2.49e-41 | 137 |
Msa0345410 | MtrunA17_Chr4g0037481 | 42.208 | 154 | 82 | 2 | 38 | 186 | 40 | 191 | 3.37e-40 | 135 |
Msa0345410 | MtrunA17_Chr7g0259101 | 50.336 | 149 | 69 | 2 | 43 | 186 | 45 | 193 | 4.81e-40 | 140 |
Msa0345410 | MtrunA17_Chr7g0259101 | 47.651 | 149 | 73 | 2 | 43 | 186 | 244 | 392 | 2.00e-38 | 135 |
Msa0345410 | MtrunA17_Chr4g0005111 | 40.816 | 147 | 84 | 1 | 43 | 186 | 43 | 189 | 1.01e-38 | 131 |
Msa0345410 | MtrunA17_Chr4g0005011 | 45.161 | 155 | 77 | 3 | 34 | 184 | 44 | 194 | 1.08e-38 | 131 |
Msa0345410 | MtrunA17_Chr5g0446751 | 38.220 | 191 | 97 | 5 | 7 | 186 | 8 | 188 | 1.78e-34 | 120 |
Msa0345410 | MtrunA17_Chr3g0136631 | 42.384 | 151 | 80 | 2 | 43 | 186 | 38 | 188 | 1.08e-33 | 118 |
Msa0345410 | MtrunA17_Chr3g0136641 | 42.384 | 151 | 79 | 3 | 43 | 186 | 38 | 187 | 3.03e-33 | 117 |
Msa0345410 | MtrunA17_Chr4g0005131 | 41.781 | 146 | 80 | 1 | 46 | 186 | 45 | 190 | 3.09e-33 | 117 |
Msa0345410 | MtrunA17_Chr7g0259121 | 44.156 | 154 | 75 | 5 | 43 | 186 | 40 | 192 | 2.89e-31 | 112 |
Msa0345410 | MtrunA17_Chr4g0024961 | 30.519 | 154 | 103 | 1 | 38 | 187 | 25 | 178 | 7.65e-20 | 82.4 |
Msa0345410 | MtrunA17_Chr4g0068391 | 32.738 | 168 | 93 | 3 | 3 | 166 | 8 | 159 | 1.08e-19 | 82.0 |
Msa0345410 | MtrunA17_Chr4g0024951 | 30.769 | 182 | 110 | 3 | 10 | 187 | 9 | 178 | 1.22e-19 | 81.6 |
Msa0345410 | MtrunA17_Chr4g0005091 | 32.903 | 155 | 86 | 2 | 36 | 186 | 34 | 174 | 3.12e-19 | 80.5 |
Msa0345410 | MtrunA17_Chr4g0068381 | 32.414 | 145 | 94 | 1 | 46 | 186 | 35 | 179 | 3.99e-19 | 80.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0345410 | AT1G65870.1 | 47.826 | 161 | 80 | 1 | 30 | 186 | 29 | 189 | 1.68e-46 | 151 |
Msa0345410 | AT5G42500.1 | 45.399 | 163 | 83 | 2 | 28 | 186 | 25 | 185 | 2.28e-45 | 148 |
Msa0345410 | AT2G21100.1 | 42.763 | 152 | 83 | 1 | 39 | 186 | 36 | 187 | 4.15e-42 | 140 |
Msa0345410 | AT2G21100.2 | 42.763 | 152 | 83 | 1 | 39 | 186 | 36 | 187 | 4.15e-42 | 140 |
Msa0345410 | AT1G22900.1 | 45.161 | 155 | 79 | 2 | 36 | 186 | 41 | 193 | 1.26e-41 | 139 |
Msa0345410 | AT5G42510.1 | 45.806 | 155 | 78 | 3 | 36 | 186 | 30 | 182 | 3.43e-41 | 137 |
Msa0345410 | AT1G55210.1 | 44.595 | 148 | 81 | 1 | 40 | 186 | 39 | 186 | 1.73e-38 | 130 |
Msa0345410 | AT1G55210.2 | 44.595 | 148 | 81 | 1 | 40 | 186 | 39 | 186 | 1.73e-38 | 130 |
Msa0345410 | AT3G13650.1 | 44.138 | 145 | 80 | 1 | 43 | 186 | 41 | 185 | 3.03e-38 | 130 |
Msa0345410 | AT1G58170.1 | 37.895 | 190 | 108 | 3 | 1 | 186 | 1 | 184 | 1.06e-37 | 129 |
Msa0345410 | AT5G49040.1 | 43.624 | 149 | 78 | 3 | 43 | 186 | 43 | 190 | 8.94e-37 | 126 |
Msa0345410 | AT5G49030.3 | 47.656 | 128 | 63 | 1 | 43 | 166 | 43 | 170 | 1.47e-33 | 126 |
Msa0345410 | AT3G13662.1 | 46.400 | 125 | 66 | 1 | 43 | 166 | 40 | 164 | 1.00e-32 | 115 |
Msa0345410 | AT3G58090.1 | 52.336 | 107 | 51 | 0 | 80 | 186 | 165 | 271 | 7.72e-32 | 116 |
Msa0345410 | AT4G38700.1 | 42.857 | 154 | 78 | 3 | 43 | 186 | 36 | 189 | 1.42e-31 | 113 |
Msa0345410 | AT2G21110.1 | 33.871 | 186 | 104 | 4 | 9 | 186 | 11 | 185 | 2.86e-29 | 107 |
Msa0345410 | AT3G13660.1 | 38.710 | 124 | 76 | 0 | 63 | 186 | 1 | 124 | 1.34e-25 | 95.9 |
Msa0345410 | AT4G11210.1 | 29.032 | 186 | 123 | 5 | 1 | 184 | 1 | 179 | 1.23e-16 | 74.3 |
Msa0345410 | AT4G23690.1 | 33.071 | 127 | 78 | 3 | 43 | 163 | 38 | 163 | 1.21e-11 | 60.8 |
Find 37 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGCTACTGCTAAGAGTGTT+TGG | 0.319714 | 3_1:+4652133 | Msa0345410:CDS |
TTGGCGGCACCGGCGTGTTT+AGG | 0.334517 | 3_1:+4652097 | Msa0345410:CDS |
TCAGTGCTTTGTTGATTTGT+TGG | 0.368171 | 3_1:-4651757 | None:intergenic |
CTGCCTATTGTTGGCGGCAC+CGG | 0.371881 | 3_1:+4652087 | Msa0345410:CDS |
CCATCAAATACAGTTGGGTT+TGG | 0.383222 | 3_1:+4651856 | Msa0345410:CDS |
CCGGCGTGTTTAGGTTTGCT+AGG | 0.384387 | 3_1:+4652106 | Msa0345410:CDS |
AGCTCAAGGGATGTTTGGTT+TGG | 0.396536 | 3_1:+4651945 | Msa0345410:CDS |
ACGCCGGTGCCGCCAACAAT+AGG | 0.397084 | 3_1:-4652090 | None:intergenic |
CCAAACCCAACTGTATTTGA+TGG | 0.400788 | 3_1:-4651856 | None:intergenic |
TCTCTAACCGTGTCTTGAAC+AGG | 0.414606 | 3_1:-4652063 | None:intergenic |
TGCTACTGCTAAGAGTGTTT+GGG | 0.423437 | 3_1:+4652134 | Msa0345410:CDS |
GCTCTTGTCCTTCAGTTAAG+AGG | 0.424118 | 3_1:-4651900 | None:intergenic |
GGTAGAGCTCAAGGGATGTT+TGG | 0.428431 | 3_1:+4651940 | Msa0345410:CDS |
CGGCGTGTTTAGGTTTGCTA+GGG | 0.449156 | 3_1:+4652107 | Msa0345410:CDS |
ATTTGTTGGTAACATGATGT+TGG | 0.455637 | 3_1:-4651743 | None:intergenic |
TCAATAATTTGTACAACCGT+TGG | 0.456883 | 3_1:-4651832 | None:intergenic |
TAACATGATGTTGGATTGTT+CGG | 0.468734 | 3_1:-4651734 | None:intergenic |
GGTAGTACTCTTAGTATGCT+TGG | 0.469670 | 3_1:+4652033 | Msa0345410:CDS |
GTTAGAGAACTGCCTATTGT+TGG | 0.476698 | 3_1:+4652078 | Msa0345410:CDS |
ATTAATCTTGCTTTCACCGA+TGG | 0.478192 | 3_1:+4652000 | Msa0345410:CDS |
ATTGATCCATCAAATACAGT+TGG | 0.481548 | 3_1:+4651850 | Msa0345410:CDS |
TTGATCCATCAAATACAGTT+GGG | 0.483436 | 3_1:+4651851 | Msa0345410:CDS |
AAACCTGTCGGTAGAGCTCA+AGG | 0.523725 | 3_1:+4651931 | Msa0345410:CDS |
GTTTGGAGCAAGTTACATGA+TGG | 0.529133 | 3_1:+4651873 | Msa0345410:CDS |
AGAGAACTGCCTATTGTTGG+CGG | 0.541168 | 3_1:+4652081 | Msa0345410:CDS |
ATCCCTTGAGCTCTACCGAC+AGG | 0.544812 | 3_1:-4651934 | None:intergenic |
GTACTCTTAGTATGCTTGGA+AGG | 0.545035 | 3_1:+4652037 | Msa0345410:CDS |
TTGTTCGGAGAACACTCCAT+TGG | 0.582295 | 3_1:-4651719 | None:intergenic |
ATGGACAACCTCTTAACTGA+AGG | 0.591801 | 3_1:+4651892 | Msa0345410:CDS |
TTGGCATCTTTGCATGATCG+TGG | 0.594187 | 3_1:+4651964 | Msa0345410:CDS |
ATCTTTGCATGATCGTGGAA+TGG | 0.599273 | 3_1:+4651969 | Msa0345410:CDS |
GAGCTAACATCAAAACCTGT+CGG | 0.634037 | 3_1:+4651919 | Msa0345410:CDS |
GGCGTGTTTAGGTTTGCTAG+GGG | 0.673525 | 3_1:+4652108 | Msa0345410:CDS |
AAGGAATCCTGTTCAAGACA+CGG | 0.674439 | 3_1:+4652056 | Msa0345410:CDS |
ACTACCAGCAAAATCACCAT+CGG | 0.683340 | 3_1:-4652016 | None:intergenic |
AACCTGTCGGTAGAGCTCAA+GGG | 0.694023 | 3_1:+4651932 | Msa0345410:CDS |
CCTAGCAAACCTAAACACGC+CGG | 0.714305 | 3_1:-4652106 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGGTAAAAAAAGTGCAAAT+GGG | - | chr3_1:4651791-4651810 | None:intergenic | 25.0% |
TAACATGATGTTGGATTGTT+CGG | - | chr3_1:4651737-4651756 | None:intergenic | 30.0% | |
!! | ATTTGTTGGTAACATGATGT+TGG | - | chr3_1:4651746-4651765 | None:intergenic | 30.0% |
! | CATGGTAAAAAAAGTGCAAA+TGG | - | chr3_1:4651792-4651811 | None:intergenic | 30.0% |
! | TTTTACCATGACATCTTAGA+AGG | + | chr3_1:4651802-4651821 | Msa0345410:CDS | 30.0% |
!!! | TTTTACCTTCTAAGATGTCA+TGG | - | chr3_1:4651810-4651829 | None:intergenic | 30.0% |
CTTAGAAGGTAAAAATCCAA+CGG | + | chr3_1:4651816-4651835 | Msa0345410:CDS | 30.0% | |
! | TCAATAATTTGTACAACCGT+TGG | - | chr3_1:4651835-4651854 | None:intergenic | 30.0% |
ATTGATCCATCAAATACAGT+TGG | + | chr3_1:4651850-4651869 | Msa0345410:CDS | 30.0% | |
TTGATCCATCAAATACAGTT+GGG | + | chr3_1:4651851-4651870 | Msa0345410:CDS | 30.0% | |
! | GCTCAATTTTTCACTACCAA+TGG | + | chr3_1:4651703-4651722 | Msa0345410:CDS | 35.0% |
!! | TCAGTGCTTTGTTGATTTGT+TGG | - | chr3_1:4651760-4651779 | None:intergenic | 35.0% |
ATTAATCTTGCTTTCACCGA+TGG | + | chr3_1:4652000-4652019 | Msa0345410:CDS | 35.0% | |
CCAAACCCAACTGTATTTGA+TGG | - | chr3_1:4651859-4651878 | None:intergenic | 40.0% | |
CCATCAAATACAGTTGGGTT+TGG | + | chr3_1:4651856-4651875 | Msa0345410:CDS | 40.0% | |
! | GTTTGGAGCAAGTTACATGA+TGG | + | chr3_1:4651873-4651892 | Msa0345410:CDS | 40.0% |
ATGGACAACCTCTTAACTGA+AGG | + | chr3_1:4651892-4651911 | Msa0345410:CDS | 40.0% | |
GAGCTAACATCAAAACCTGT+CGG | + | chr3_1:4651919-4651938 | Msa0345410:CDS | 40.0% | |
ATCTTTGCATGATCGTGGAA+TGG | + | chr3_1:4651969-4651988 | Msa0345410:CDS | 40.0% | |
ACTACCAGCAAAATCACCAT+CGG | - | chr3_1:4652019-4652038 | None:intergenic | 40.0% | |
GGTAGTACTCTTAGTATGCT+TGG | + | chr3_1:4652033-4652052 | Msa0345410:CDS | 40.0% | |
GTACTCTTAGTATGCTTGGA+AGG | + | chr3_1:4652037-4652056 | Msa0345410:CDS | 40.0% | |
AAGGAATCCTGTTCAAGACA+CGG | + | chr3_1:4652056-4652075 | Msa0345410:CDS | 40.0% | |
GTTAGAGAACTGCCTATTGT+TGG | + | chr3_1:4652078-4652097 | Msa0345410:CDS | 40.0% | |
!! | ATGCTACTGCTAAGAGTGTT+TGG | + | chr3_1:4652133-4652152 | Msa0345410:CDS | 40.0% |
!! | TGCTACTGCTAAGAGTGTTT+GGG | + | chr3_1:4652134-4652153 | Msa0345410:CDS | 40.0% |
TTGTTCGGAGAACACTCCAT+TGG | - | chr3_1:4651722-4651741 | None:intergenic | 45.0% | |
GCTCTTGTCCTTCAGTTAAG+AGG | - | chr3_1:4651903-4651922 | None:intergenic | 45.0% | |
AGCTCAAGGGATGTTTGGTT+TGG | + | chr3_1:4651945-4651964 | Msa0345410:CDS | 45.0% | |
TTGGCATCTTTGCATGATCG+TGG | + | chr3_1:4651964-4651983 | Msa0345410:CDS | 45.0% | |
! | TTCACCGATGGTGATTTTGC+TGG | + | chr3_1:4652012-4652031 | Msa0345410:CDS | 45.0% |
TCTCTAACCGTGTCTTGAAC+AGG | - | chr3_1:4652066-4652085 | None:intergenic | 45.0% | |
AGAGAACTGCCTATTGTTGG+CGG | + | chr3_1:4652081-4652100 | Msa0345410:CDS | 45.0% | |
AAACCTGTCGGTAGAGCTCA+AGG | + | chr3_1:4651931-4651950 | Msa0345410:CDS | 50.0% | |
AACCTGTCGGTAGAGCTCAA+GGG | + | chr3_1:4651932-4651951 | Msa0345410:CDS | 50.0% | |
GGTAGAGCTCAAGGGATGTT+TGG | + | chr3_1:4651940-4651959 | Msa0345410:CDS | 50.0% | |
CCTAGCAAACCTAAACACGC+CGG | - | chr3_1:4652109-4652128 | None:intergenic | 50.0% | |
!! | CGGCGTGTTTAGGTTTGCTA+GGG | + | chr3_1:4652107-4652126 | Msa0345410:CDS | 50.0% |
!! | GGCGTGTTTAGGTTTGCTAG+GGG | + | chr3_1:4652108-4652127 | Msa0345410:CDS | 50.0% |
ATCCCTTGAGCTCTACCGAC+AGG | - | chr3_1:4651937-4651956 | None:intergenic | 55.0% | |
! | CCGGCGTGTTTAGGTTTGCT+AGG | + | chr3_1:4652106-4652125 | Msa0345410:CDS | 55.0% |
CTGCCTATTGTTGGCGGCAC+CGG | + | chr3_1:4652087-4652106 | Msa0345410:CDS | 60.0% | |
!! | ACGCCGGTGCCGCCAACAAT+AGG | - | chr3_1:4652093-4652112 | None:intergenic | 65.0% |
!! | TTGGCGGCACCGGCGTGTTT+AGG | + | chr3_1:4652097-4652116 | Msa0345410:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 4651652 | 4652215 | 4651652 | ID=Msa0345410;Name=Msa0345410 |
chr3_1 | mRNA | 4651652 | 4652215 | 4651652 | ID=Msa0345410-mRNA-1;Parent=Msa0345410;Name=Msa0345410-mRNA-1;_AED=0.24;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|187 |
chr3_1 | exon | 4651652 | 4652215 | 4651652 | ID=Msa0345410-mRNA-1:exon:1499;Parent=Msa0345410-mRNA-1 |
chr3_1 | CDS | 4651652 | 4652215 | 4651652 | ID=Msa0345410-mRNA-1:cds;Parent=Msa0345410-mRNA-1 |
Gene Sequence |
Protein sequence |