Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345330 | XP_039688244.1 | 96.257 | 187 | 7 | 0 | 1 | 187 | 1 | 187 | 2.84e-130 | 373 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345330 | sp|Q9SS03|DIR21_ARATH | 47.826 | 161 | 80 | 1 | 30 | 186 | 29 | 189 | 1.65e-45 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345330 | A0A396IK46 | 96.257 | 187 | 7 | 0 | 1 | 187 | 1 | 187 | 1.35e-130 | 373 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa0345330 | 0.829585 | 4.741610e-55 | -8.615850e-47 |
| Msa0016670 | Msa0345330 | 0.820327 | 7.274755e-53 | -8.615850e-47 |
| Msa0017510 | Msa0345330 | 0.844175 | 8.894538e-59 | -8.615850e-47 |
| Msa0018000 | Msa0345330 | 0.838251 | 3.213255e-57 | -8.615850e-47 |
| Msa0024550 | Msa0345330 | 0.837298 | 5.643956e-57 | -8.615850e-47 |
| Msa0025630 | Msa0345330 | 0.803178 | 3.945183e-49 | -8.615850e-47 |
| Msa0028420 | Msa0345330 | 0.802776 | 4.778556e-49 | -8.615850e-47 |
| Msa0028640 | Msa0345330 | 0.808605 | 2.853379e-50 | -8.615850e-47 |
| Msa0032840 | Msa0345330 | -0.801395 | 9.189742e-49 | -8.615850e-47 |
| Msa0036130 | Msa0345330 | 0.835512 | 1.607050e-56 | -8.615850e-47 |
| Msa0046100 | Msa0345330 | 0.835871 | 1.303896e-56 | -8.615850e-47 |
| Msa0049790 | Msa0345330 | 0.809032 | 2.312585e-50 | -8.615850e-47 |
| Msa0050390 | Msa0345330 | 0.822786 | 1.966492e-53 | -8.615850e-47 |
| Msa0061340 | Msa0345330 | 0.826727 | 2.314584e-54 | -8.615850e-47 |
| Msa0063890 | Msa0345330 | 0.801522 | 8.652074e-49 | -8.615850e-47 |
| Msa0069330 | Msa0345330 | 0.802169 | 6.371945e-49 | -8.615850e-47 |
| Msa0072370 | Msa0345330 | 0.806830 | 6.797451e-50 | -8.615850e-47 |
| Msa0074240 | Msa0345330 | 0.828350 | 9.440655e-55 | -8.615850e-47 |
| Msa0076250 | Msa0345330 | 0.830937 | 2.216514e-55 | -8.615850e-47 |
| Msa0081360 | Msa0345330 | 0.838532 | 2.719723e-57 | -8.615850e-47 |
| Msa0081480 | Msa0345330 | 0.834602 | 2.726031e-56 | -8.615850e-47 |
| Msa0081520 | Msa0345330 | 0.840397 | 8.914235e-58 | -8.615850e-47 |
| Msa0089630 | Msa0345330 | 0.834978 | 2.191890e-56 | -8.615850e-47 |
| Msa0091600 | Msa0345330 | 0.815234 | 1.026309e-51 | -8.615850e-47 |
| Msa0094850 | Msa0345330 | 0.841813 | 3.784910e-58 | -8.615850e-47 |
| Msa0101440 | Msa0345330 | 0.802887 | 4.532859e-49 | -8.615850e-47 |
| Msa0110970 | Msa0345330 | 0.852620 | 4.097126e-61 | -8.615850e-47 |
| Msa0112570 | Msa0345330 | 0.801860 | 7.378358e-49 | -8.615850e-47 |
| Msa0114540 | Msa0345330 | -0.818966 | 1.487657e-52 | -8.615850e-47 |
| Msa0115160 | Msa0345330 | 0.826157 | 3.163857e-54 | -8.615850e-47 |
| Msa0118570 | Msa0345330 | 0.833834 | 4.247185e-56 | -8.615850e-47 |
| Msa0120400 | Msa0345330 | 0.843349 | 1.480346e-58 | -8.615850e-47 |
| Msa0123100 | Msa0345330 | 0.813561 | 2.404603e-51 | -8.615850e-47 |
| Msa0124060 | Msa0345330 | 0.812542 | 4.023509e-51 | -8.615850e-47 |
| Msa0124280 | Msa0345330 | 0.800881 | 1.170272e-48 | -8.615850e-47 |
| Msa0130240 | Msa0345330 | 0.828294 | 9.737731e-55 | -8.615850e-47 |
| Msa0130570 | Msa0345330 | 0.809199 | 2.129612e-50 | -8.615850e-47 |
| Msa0136070 | Msa0345330 | 0.800450 | 1.433248e-48 | -8.615850e-47 |
| Msa0144360 | Msa0345330 | 0.830375 | 3.043216e-55 | -8.615850e-47 |
| Msa0146260 | Msa0345330 | 0.827419 | 1.581037e-54 | -8.615850e-47 |
| Msa0152400 | Msa0345330 | 0.832338 | 1.000793e-55 | -8.615850e-47 |
| Msa0157290 | Msa0345330 | 0.845118 | 4.955610e-59 | -8.615850e-47 |
| Msa0164330 | Msa0345330 | 0.814306 | 1.648061e-51 | -8.615850e-47 |
| Msa0166560 | Msa0345330 | 0.839297 | 1.723638e-57 | -8.615850e-47 |
| Msa0168500 | Msa0345330 | 0.829655 | 4.559410e-55 | -8.615850e-47 |
| Msa0169860 | Msa0345330 | 0.827109 | 1.875840e-54 | -8.615850e-47 |
| Msa0173890 | Msa0345330 | 0.846190 | 2.537072e-59 | -8.615850e-47 |
| Msa0182680 | Msa0345330 | 0.810402 | 1.173533e-50 | -8.615850e-47 |
| Msa0188150 | Msa0345330 | 0.816331 | 5.843626e-52 | -8.615850e-47 |
| Msa0197420 | Msa0345330 | 0.826866 | 2.144313e-54 | -8.615850e-47 |
| Msa0197930 | Msa0345330 | 0.804577 | 2.020933e-49 | -8.615850e-47 |
| Msa0211150 | Msa0345330 | 0.802468 | 5.529493e-49 | -8.615850e-47 |
| Msa0215320 | Msa0345330 | -0.814861 | 1.241659e-51 | -8.615850e-47 |
| Msa0220740 | Msa0345330 | 0.800099 | 1.688967e-48 | -8.615850e-47 |
| Msa0221290 | Msa0345330 | 0.827306 | 1.682620e-54 | -8.615850e-47 |
| Msa0239030 | Msa0345330 | 0.810631 | 1.046965e-50 | -8.615850e-47 |
| Msa0239190 | Msa0345330 | 0.806070 | 9.832146e-50 | -8.615850e-47 |
| Msa0247940 | Msa0345330 | 0.804921 | 1.712509e-49 | -8.615850e-47 |
| Msa0258310 | Msa0345330 | 0.804067 | 2.581253e-49 | -8.615850e-47 |
| Msa0261340 | Msa0345330 | 0.816767 | 4.667716e-52 | -8.615850e-47 |
| Msa0263080 | Msa0345330 | 0.808586 | 2.879798e-50 | -8.615850e-47 |
| Msa0276740 | Msa0345330 | 0.811296 | 7.516838e-51 | -8.615850e-47 |
| Msa0277180 | Msa0345330 | 0.818303 | 2.103219e-52 | -8.615850e-47 |
| Msa0277450 | Msa0345330 | 0.822446 | 2.359118e-53 | -8.615850e-47 |
| Msa0284410 | Msa0345330 | 0.800224 | 1.593346e-48 | -8.615850e-47 |
| Msa0287650 | Msa0345330 | 0.809886 | 1.515723e-50 | -8.615850e-47 |
| Msa0292400 | Msa0345330 | 0.851708 | 7.444779e-61 | -8.615850e-47 |
| Msa0294560 | Msa0345330 | -0.808689 | 2.737855e-50 | -8.615850e-47 |
| Msa0297740 | Msa0345330 | 0.805444 | 1.331150e-49 | -8.615850e-47 |
| Msa0297790 | Msa0345330 | 0.822135 | 2.784908e-53 | -8.615850e-47 |
| Msa0300270 | Msa0345330 | 0.837830 | 4.124051e-57 | -8.615850e-47 |
| Msa0300320 | Msa0345330 | 0.843370 | 1.460795e-58 | -8.615850e-47 |
| Msa0300690 | Msa0345330 | 0.862055 | 6.643885e-64 | -8.615850e-47 |
| Msa0306370 | Msa0345330 | 0.804495 | 2.101669e-49 | -8.615850e-47 |
| Msa0316680 | Msa0345330 | 0.810342 | 1.208971e-50 | -8.615850e-47 |
| Msa0316810 | Msa0345330 | 0.836253 | 1.042537e-56 | -8.615850e-47 |
| Msa0317160 | Msa0345330 | 0.807415 | 5.112252e-50 | -8.615850e-47 |
| Msa0317280 | Msa0345330 | 0.811707 | 6.120083e-51 | -8.615850e-47 |
| Msa0317340 | Msa0345330 | 0.802691 | 4.975873e-49 | -8.615850e-47 |
| Msa0317510 | Msa0345330 | 0.800544 | 1.371600e-48 | -8.615850e-47 |
| Msa0333920 | Msa0345330 | 0.806308 | 8.762120e-50 | -8.615850e-47 |
| Msa0334040 | Msa0345330 | 0.813379 | 2.637346e-51 | -8.615850e-47 |
| Msa0334220 | Msa0345330 | 0.808619 | 2.833354e-50 | -8.615850e-47 |
| Msa0335800 | Msa0345330 | 0.822867 | 1.882560e-53 | -8.615850e-47 |
| Msa0338210 | Msa0345330 | 0.808822 | 2.564525e-50 | -8.615850e-47 |
| Msa0339500 | Msa0345330 | 0.834767 | 2.477176e-56 | -8.615850e-47 |
| Msa0344570 | Msa0345330 | 0.807850 | 4.132330e-50 | -8.615850e-47 |
| Msa0345330 | Msa0345410 | 0.994770 | 4.680487e-210 | -8.615850e-47 |
| Msa0345330 | Msa0350620 | 0.843508 | 1.342092e-58 | -8.615850e-47 |
| Msa0345330 | Msa0362780 | 0.806903 | 6.562245e-50 | -8.615850e-47 |
| Msa0345330 | Msa0363070 | 0.812669 | 3.774406e-51 | -8.615850e-47 |
| Msa0345330 | Msa0378720 | 0.831946 | 1.251001e-55 | -8.615850e-47 |
| Msa0345330 | Msa0385390 | 0.858121 | 1.023806e-62 | -8.615850e-47 |
| Msa0345330 | Msa0388960 | 0.801992 | 6.929252e-49 | -8.615850e-47 |
| Msa0345330 | Msa0392420 | 0.823626 | 1.251789e-53 | -8.615850e-47 |
| Msa0345330 | Msa0392460 | 0.820436 | 6.866719e-53 | -8.615850e-47 |
| Msa0345330 | Msa0392490 | 0.820796 | 5.675931e-53 | -8.615850e-47 |
| Msa0345330 | Msa0395790 | 0.816084 | 6.634573e-52 | -8.615850e-47 |
| Msa0345330 | Msa0405130 | 0.800525 | 1.383454e-48 | -8.615850e-47 |
| Msa0345330 | Msa0410500 | 0.832378 | 9.782169e-56 | -8.615850e-47 |
| Msa0345330 | Msa0410650 | 0.816127 | 6.489182e-52 | -8.615850e-47 |
| Msa0345330 | Msa0415320 | 0.837580 | 4.778796e-57 | -8.615850e-47 |
| Msa0345330 | Msa0417880 | 0.818600 | 1.800754e-52 | -8.615850e-47 |
| Msa0345330 | Msa0418190 | 0.825429 | 4.711104e-54 | -8.615850e-47 |
| Msa0345330 | Msa0419820 | 0.805849 | 1.094629e-49 | -8.615850e-47 |
| Msa0345330 | Msa0422850 | 0.832408 | 9.617930e-56 | -8.615850e-47 |
| Msa0345330 | Msa0422930 | 0.831193 | 1.917630e-55 | -8.615850e-47 |
| Msa0345330 | Msa0428240 | 0.801086 | 1.062899e-48 | -8.615850e-47 |
| Msa0345330 | Msa0440650 | 0.800641 | 1.310470e-48 | -8.615850e-47 |
| Msa0345330 | Msa0443260 | 0.800115 | 1.676744e-48 | -8.615850e-47 |
| Msa0345330 | Msa0443310 | 0.806755 | 7.049659e-50 | -8.615850e-47 |
| Msa0345330 | Msa0445110 | 0.889615 | 2.066367e-73 | -8.615850e-47 |
| Msa0345330 | Msa0447370 | 0.834108 | 3.625550e-56 | -8.615850e-47 |
| Msa0345330 | Msa0450720 | 0.813845 | 2.082024e-51 | -8.615850e-47 |
| Msa0345330 | Msa0461720 | 0.825224 | 5.266080e-54 | -8.615850e-47 |
| Msa0345330 | Msa0464260 | 0.828957 | 6.732588e-55 | -8.615850e-47 |
| Msa0345330 | Msa0464680 | 0.809889 | 1.513565e-50 | -8.615850e-47 |
| Msa0345330 | Msa0467430 | 0.829254 | 5.705176e-55 | -8.615850e-47 |
| Msa0345330 | Msa0469030 | 0.808887 | 2.482670e-50 | -8.615850e-47 |
| Msa0345330 | Msa0474730 | 0.816058 | 6.725939e-52 | -8.615850e-47 |
| Msa0345330 | Msa0475790 | 0.829745 | 4.335544e-55 | -8.615850e-47 |
| Msa0345330 | Msa0479170 | 0.809889 | 1.513565e-50 | -8.615850e-47 |
| Msa0345330 | Msa0479540 | 0.825754 | 3.944645e-54 | -8.615850e-47 |
| Msa0345330 | Msa0487570 | 0.820340 | 7.224110e-53 | -8.615850e-47 |
| Msa0345330 | Msa0487630 | 0.827876 | 1.227769e-54 | -8.615850e-47 |
| Msa0345330 | Msa0492550 | 0.889166 | 3.088252e-73 | -8.615850e-47 |
| Msa0345330 | Msa0498060 | 0.823598 | 1.270786e-53 | -8.615850e-47 |
| Msa0345330 | Msa0498450 | 0.815420 | 9.331038e-52 | -8.615850e-47 |
| Msa0345330 | Msa0503590 | 0.832300 | 1.022434e-55 | -8.615850e-47 |
| Msa0345330 | Msa0507680 | 0.816207 | 6.227391e-52 | -8.615850e-47 |
| Msa0345330 | Msa0509610 | 0.807663 | 4.529127e-50 | -8.615850e-47 |
| Msa0345330 | Msa0512230 | 0.806762 | 7.025689e-50 | -8.615850e-47 |
| Msa0345330 | Msa0513160 | 0.842302 | 2.810333e-58 | -8.615850e-47 |
| Msa0345330 | Msa0517090 | 0.800668 | 1.293738e-48 | -8.615850e-47 |
| Msa0345330 | Msa0523000 | 0.824418 | 8.161441e-54 | -8.615850e-47 |
| Msa0345330 | Msa0527550 | 0.815066 | 1.118574e-51 | -8.615850e-47 |
| Msa0345330 | Msa0527860 | 0.818911 | 1.531012e-52 | -8.615850e-47 |
| Msa0345330 | Msa0535040 | 0.847790 | 9.251429e-60 | -8.615850e-47 |
| Msa0345330 | Msa0547020 | 0.805805 | 1.118021e-49 | -8.615850e-47 |
| Msa0345330 | Msa0547230 | 0.805784 | 1.129433e-49 | -8.615850e-47 |
| Msa0345330 | Msa0556010 | 0.804216 | 2.402538e-49 | -8.615850e-47 |
| Msa0345330 | Msa0573380 | 0.808979 | 2.372903e-50 | -8.615850e-47 |
| Msa0345330 | Msa0574890 | 0.843772 | 1.140972e-58 | -8.615850e-47 |
| Msa0345330 | Msa0582450 | 0.809489 | 1.845395e-50 | -8.615850e-47 |
| Msa0345330 | Msa0586190 | 0.809872 | 1.526254e-50 | -8.615850e-47 |
| Msa0345330 | Msa0587940 | 0.802836 | 4.643382e-49 | -8.615850e-47 |
| Msa0345330 | Msa0591790 | 0.801454 | 8.934410e-49 | -8.615850e-47 |
| Msa0345330 | Msa0594660 | 0.828355 | 9.415506e-55 | -8.615850e-47 |
| Msa0345330 | Msa0602250 | 0.801066 | 1.073145e-48 | -8.615850e-47 |
| Msa0345330 | Msa0614000 | 0.816141 | 6.445440e-52 | -8.615850e-47 |
| Msa0345330 | Msa0623330 | 0.828613 | 8.156791e-55 | -8.615850e-47 |
| Msa0345330 | Msa0626450 | 0.825883 | 3.676653e-54 | -8.615850e-47 |
| Msa0345330 | Msa0626490 | 0.826644 | 2.422081e-54 | -8.615850e-47 |
| Msa0345330 | Msa0626510 | 0.846986 | 1.538371e-59 | -8.615850e-47 |
| Msa0345330 | Msa0638480 | 0.851797 | 7.021474e-61 | -8.615850e-47 |
| Msa0345330 | Msa0642880 | 0.810315 | 1.225607e-50 | -8.615850e-47 |
| Msa0345330 | Msa0647130 | 0.800257 | 1.569079e-48 | -8.615850e-47 |
| Msa0345330 | Msa0663300 | 0.805661 | 1.198562e-49 | -8.615850e-47 |
| Msa0345330 | Msa0664600 | 0.826133 | 3.205886e-54 | -8.615850e-47 |
| Msa0345330 | Msa0664910 | 0.846089 | 2.703020e-59 | -8.615850e-47 |
| Msa0345330 | Msa0682620 | 0.801055 | 1.078369e-48 | -8.615850e-47 |
| Msa0345330 | Msa0683570 | 0.832861 | 7.423669e-56 | -8.615850e-47 |
| Msa0345330 | Msa0684500 | 0.815588 | 8.559626e-52 | -8.615850e-47 |
| Msa0345330 | Msa0686560 | 0.806363 | 8.531616e-50 | -8.615850e-47 |
| Msa0345330 | Msa0688770 | 0.807636 | 4.588188e-50 | -8.615850e-47 |
| Msa0345330 | Msa0697160 | 0.810963 | 8.875442e-51 | -8.615850e-47 |
| Msa0345330 | Msa0701280 | 0.807830 | 4.172884e-50 | -8.615850e-47 |
| Msa0345330 | Msa0702340 | 0.822888 | 1.861050e-53 | -8.615850e-47 |
| Msa0345330 | Msa0702350 | 0.825582 | 4.333051e-54 | -8.615850e-47 |
| Msa0345330 | Msa0702570 | 0.818545 | 1.853710e-52 | -8.615850e-47 |
| Msa0345330 | Msa0702590 | 0.825534 | 4.447439e-54 | -8.615850e-47 |
| Msa0345330 | Msa0702660 | 0.823914 | 1.071312e-53 | -8.615850e-47 |
| Msa0345330 | Msa0702680 | 0.815792 | 7.710664e-52 | -8.615850e-47 |
| Msa0345330 | Msa0708520 | 0.803272 | 3.773923e-49 | -8.615850e-47 |
| Msa0345330 | Msa0710800 | 0.807411 | 5.121403e-50 | -8.615850e-47 |
| Msa0345330 | Msa0712270 | 0.800979 | 1.117719e-48 | -8.615850e-47 |
| Msa0345330 | Msa0727710 | 0.800259 | 1.567232e-48 | -8.615850e-47 |
| Msa0345330 | Msa0727930 | 0.802752 | 4.833363e-49 | -8.615850e-47 |
| Msa0345330 | Msa0733390 | 0.807621 | 4.622607e-50 | -8.615850e-47 |
| Msa0345330 | Msa0738040 | 0.832006 | 1.208862e-55 | -8.615850e-47 |
| Msa0345330 | Msa0765240 | 0.802336 | 5.888244e-49 | -8.615850e-47 |
| Msa0345330 | Msa0769180 | 0.824647 | 7.208517e-54 | -8.615850e-47 |
| Msa0345330 | Msa0777570 | -0.808419 | 3.126136e-50 | -8.615850e-47 |
| Msa0345330 | Msa0785210 | 0.852593 | 4.169878e-61 | -8.615850e-47 |
| Msa0345330 | Msa0807280 | 0.806592 | 7.631118e-50 | -8.615850e-47 |
| Msa0345330 | Msa0826130 | 0.823745 | 1.173988e-53 | -8.615850e-47 |
| Msa0345330 | Msa0828560 | 0.837994 | 3.741143e-57 | -8.615850e-47 |
| Msa0345330 | Msa0843220 | 0.837135 | 6.213500e-57 | -8.615850e-47 |
| Msa0345330 | Msa0861510 | 0.841611 | 4.278948e-58 | -8.615850e-47 |
| Msa0345330 | Msa0861530 | 0.829499 | 4.976073e-55 | -8.615850e-47 |
| Msa0345330 | Msa0861600 | 0.834293 | 3.258332e-56 | -8.615850e-47 |
| Msa0345330 | Msa0861870 | 0.809933 | 1.480936e-50 | -8.615850e-47 |
| Msa0345330 | Msa0875290 | 0.801655 | 8.128614e-49 | -8.615850e-47 |
| Msa0345330 | Msa0880140 | 0.840619 | 7.799022e-58 | -8.615850e-47 |
| Msa0345330 | Msa0895790 | 0.807329 | 5.330265e-50 | -8.615850e-47 |
| Msa0345330 | Msa0896970 | 0.864577 | 1.100041e-64 | -8.615850e-47 |
| Msa0345330 | Msa0908050 | 0.815638 | 8.342225e-52 | -8.615850e-47 |
| Msa0345330 | Msa0910430 | 0.816434 | 5.541627e-52 | -8.615850e-47 |
| Msa0345330 | Msa0930780 | 0.838309 | 3.104612e-57 | -8.615850e-47 |
| Msa0345330 | Msa0934890 | 0.809897 | 1.507868e-50 | -8.615850e-47 |
| Msa0345330 | Msa0936340 | 0.833412 | 5.413004e-56 | -8.615850e-47 |
| Msa0345330 | Msa0936410 | 0.800043 | 1.733822e-48 | -8.615850e-47 |
| Msa0345330 | Msa0948290 | 0.833252 | 5.933601e-56 | -8.615850e-47 |
| Msa0345330 | Msa0961690 | 0.802215 | 6.236052e-49 | -8.615850e-47 |
| Msa0345330 | Msa0964840 | 0.800335 | 1.512776e-48 | -8.615850e-47 |
| Msa0345330 | Msa0967380 | 0.858693 | 6.914865e-63 | -8.615850e-47 |
| Msa0345330 | Msa0969200 | 0.800292 | 1.543365e-48 | -8.615850e-47 |
| Msa0345330 | Msa0969520 | 0.801833 | 7.473156e-49 | -8.615850e-47 |
| Msa0345330 | Msa0972670 | 0.802056 | 6.724933e-49 | -8.615850e-47 |
| Msa0345330 | Msa0980340 | 0.808159 | 3.552447e-50 | -8.615850e-47 |
| Msa0345330 | Msa0996960 | 0.821351 | 4.228190e-53 | -8.615850e-47 |
| Msa0345330 | Msa1003030 | 0.832291 | 1.028029e-55 | -8.615850e-47 |
| Msa0345330 | Msa1005870 | 0.850728 | 1.407284e-60 | -8.615850e-47 |
| Msa0345330 | Msa1019430 | 0.822711 | 2.046349e-53 | -8.615850e-47 |
| Msa0345330 | Msa1019470 | 0.818366 | 2.034724e-52 | -8.615850e-47 |
| Msa0345330 | Msa1020510 | 0.813987 | 1.937839e-51 | -8.615850e-47 |
| Msa0345330 | Msa1031930 | 0.832585 | 8.691874e-56 | -8.615850e-47 |
| Msa0345330 | Msa1037920 | 0.807153 | 5.808802e-50 | -8.615850e-47 |
| Msa0345330 | Msa1043370 | 0.823368 | 1.438564e-53 | -8.615850e-47 |
| Msa0345330 | Msa1047980 | 0.829656 | 4.555446e-55 | -8.615850e-47 |
| Msa0345330 | Msa1048920 | 0.814480 | 1.508032e-51 | -8.615850e-47 |
| Msa0345330 | Msa1051830 | 0.819996 | 8.660392e-53 | -8.615850e-47 |
| Msa0345330 | Msa1054240 | 0.804073 | 2.573872e-49 | -8.615850e-47 |
| Msa0345330 | Msa1066490 | 0.834825 | 2.395125e-56 | -8.615850e-47 |
| Msa0345330 | Msa1078170 | 0.805219 | 1.483520e-49 | -8.615850e-47 |
| Msa0345330 | Msa1079230 | 0.820046 | 8.436864e-53 | -8.615850e-47 |
| Msa0345330 | Msa1085200 | 0.811802 | 5.834459e-51 | -8.615850e-47 |
| Msa0345330 | Msa1092010 | 0.850351 | 1.796381e-60 | -8.615850e-47 |
| Msa0345330 | Msa1093840 | 0.811686 | 6.184109e-51 | -8.615850e-47 |
| Msa0345330 | Msa1097640 | 0.805899 | 1.068256e-49 | -8.615850e-47 |
| Msa0345330 | Msa1121490 | 0.801541 | 8.575447e-49 | -8.615850e-47 |
| Msa0345330 | Msa1123380 | 0.827147 | 1.837348e-54 | -8.615850e-47 |
| Msa0345330 | Msa1124110 | 0.828280 | 9.815174e-55 | -8.615850e-47 |
| Msa0345330 | Msa1125000 | 0.812323 | 4.492465e-51 | -8.615850e-47 |
| Msa0345330 | Msa1135390 | 0.804159 | 2.469607e-49 | -8.615850e-47 |
| Msa0345330 | Msa1137570 | 0.823772 | 1.156765e-53 | -8.615850e-47 |
| Msa0345330 | Msa1139810 | 0.808484 | 3.027635e-50 | -8.615850e-47 |
| Msa0345330 | Msa1151910 | 0.804287 | 2.322141e-49 | -8.615850e-47 |
| Msa0345330 | Msa1157870 | 0.827794 | 1.284815e-54 | -8.615850e-47 |
| Msa0345330 | Msa1163650 | -0.812784 | 3.560982e-51 | -8.615850e-47 |
| Msa0345330 | Msa1166400 | 0.802957 | 4.383551e-49 | -8.615850e-47 |
| Msa0345330 | Msa1168950 | 0.819948 | 8.881632e-53 | -8.615850e-47 |
| Msa0345330 | Msa1169040 | 0.817766 | 2.781034e-52 | -8.615850e-47 |
| Msa0345330 | Msa1178180 | 0.817192 | 3.745437e-52 | -8.615850e-47 |
| Msa0345330 | Msa1179280 | 0.801621 | 8.257679e-49 | -8.615850e-47 |
| Msa0345330 | Msa1179940 | 0.805639 | 1.211548e-49 | -8.615850e-47 |
| Msa0345330 | Msa1179970 | 0.801191 | 1.011698e-48 | -8.615850e-47 |
| Msa0345330 | Msa1182770 | 0.811284 | 7.561076e-51 | -8.615850e-47 |
| Msa0345330 | Msa1189070 | 0.802748 | 4.841086e-49 | -8.615850e-47 |
| Msa0345330 | Msa1193290 | 0.830095 | 3.560731e-55 | -8.615850e-47 |
| Msa0345330 | Msa1202190 | 0.804833 | 1.787055e-49 | -8.615850e-47 |
| Msa0345330 | Msa1203710 | 0.803259 | 3.797478e-49 | -8.615850e-47 |
| Msa0345330 | Msa1208160 | 0.845296 | 4.436037e-59 | -8.615850e-47 |
| Msa0345330 | Msa1208430 | 0.839507 | 1.520639e-57 | -8.615850e-47 |
| Msa0345330 | Msa1208890 | -0.805857 | 1.090248e-49 | -8.615850e-47 |
| Msa0345330 | Msa1209460 | 0.830247 | 3.270234e-55 | -8.615850e-47 |
| Msa0345330 | Msa1218280 | -0.806880 | 6.633865e-50 | -8.615850e-47 |
| Msa0345330 | Msa1221060 | 0.818966 | 1.487642e-52 | -8.615850e-47 |
| Msa0345330 | Msa1224830 | 0.820499 | 6.640925e-53 | -8.615850e-47 |
| Msa0345330 | Msa1224840 | 0.822264 | 2.600266e-53 | -8.615850e-47 |
| Msa0345330 | Msa1231820 | 0.810599 | 1.063827e-50 | -8.615850e-47 |
| Msa0345330 | Msa1232710 | 0.803959 | 2.717076e-49 | -8.615850e-47 |
| Msa0345330 | Msa1236100 | 0.838895 | 2.191161e-57 | -8.615850e-47 |
| Msa0345330 | Msa1236410 | 0.810260 | 1.259448e-50 | -8.615850e-47 |
| Msa0345330 | Msa1238930 | 0.814867 | 1.237715e-51 | -8.615850e-47 |
| Msa0345330 | Msa1242230 | 0.810680 | 1.022124e-50 | -8.615850e-47 |
| Msa0345330 | Msa1242240 | 0.822885 | 1.864766e-53 | -8.615850e-47 |
| Msa0345330 | Msa1245940 | -0.800050 | 1.728756e-48 | -8.615850e-47 |
| Msa0345330 | Msa1259070 | -0.804832 | 1.787607e-49 | -8.615850e-47 |
| Msa0345330 | Msa1264710 | 0.831176 | 1.936463e-55 | -8.615850e-47 |
| Msa0345330 | Msa1267900 | 0.815553 | 8.717491e-52 | -8.615850e-47 |
| Msa0345330 | Msa1269820 | 0.908071 | 2.551758e-81 | -8.615850e-47 |
| Msa0345330 | Msa1271990 | 0.809704 | 1.658874e-50 | -8.615850e-47 |
| Msa0345330 | Msa1274060 | 0.814043 | 1.883580e-51 | -8.615850e-47 |
| Msa0345330 | Msa1274520 | 0.815111 | 1.092990e-51 | -8.615850e-47 |
| Msa0345330 | Msa1276660 | 0.842820 | 2.047015e-58 | -8.615850e-47 |
| Msa0345330 | Msa1277490 | 0.822248 | 2.621512e-53 | -8.615850e-47 |
| Msa0345330 | Msa1283840 | 0.832201 | 1.081824e-55 | -8.615850e-47 |
| Msa0345330 | Msa1284260 | 0.840227 | 9.873619e-58 | -8.615850e-47 |
| Msa0345330 | Msa1292340 | 0.809705 | 1.658391e-50 | -8.615850e-47 |
| Msa0345330 | Msa1298370 | 0.842851 | 2.009006e-58 | -8.615850e-47 |
| Msa0345330 | Msa1303240 | 0.824481 | 7.883927e-54 | -8.615850e-47 |
| Msa0345330 | Msa1303250 | 0.838393 | 2.952740e-57 | -8.615850e-47 |
| Msa0345330 | Msa1305510 | 0.802408 | 5.690427e-49 | -8.615850e-47 |
| Msa0345330 | Msa1313150 | 0.804286 | 2.324016e-49 | -8.615850e-47 |
| Msa0345330 | Msa1313970 | 0.801851 | 7.409748e-49 | -8.615850e-47 |
| Msa0345330 | Msa1322860 | 0.827649 | 1.391888e-54 | -8.615850e-47 |
| Msa0345330 | Msa1327050 | 0.837948 | 3.846072e-57 | -8.615850e-47 |
| Msa0345330 | Msa1332000 | 0.808196 | 3.488309e-50 | -8.615850e-47 |
| Msa0345330 | Msa1333480 | 0.807322 | 5.348343e-50 | -8.615850e-47 |
| Msa0345330 | Msa1346370 | 0.834978 | 2.191889e-56 | -8.615850e-47 |
| Msa0345330 | Msa1346420 | 0.809796 | 1.585027e-50 | -8.615850e-47 |
| Msa0345330 | Msa1351760 | 0.820075 | 8.305281e-53 | -8.615850e-47 |
| Msa0345330 | Msa1353470 | 0.806142 | 9.494609e-50 | -8.615850e-47 |
| Msa0345330 | Msa1356830 | 0.825694 | 4.075956e-54 | -8.615850e-47 |
| Msa0345330 | Msa1361400 | 0.819666 | 1.030484e-52 | -8.615850e-47 |
| Msa0345330 | Msa1361410 | 0.809368 | 1.958990e-50 | -8.615850e-47 |
| Msa0345330 | Msa1364470 | -0.803611 | 3.209743e-49 | -8.615850e-47 |
| Msa0345330 | Msa1366340 | 0.827344 | 1.647927e-54 | -8.615850e-47 |
| Msa0345330 | Msa1369150 | 0.808282 | 3.343374e-50 | -8.615850e-47 |
| Msa0345330 | Msa1373100 | 0.819516 | 1.114855e-52 | -8.615850e-47 |
| Msa0345330 | Msa1373330 | 0.800825 | 1.201450e-48 | -8.615850e-47 |
| Msa0345330 | Msa1374040 | 0.830900 | 2.263084e-55 | -8.615850e-47 |
| Msa0345330 | Msa1374550 | 0.850647 | 1.483568e-60 | -8.615850e-47 |
| Msa0345330 | Msa1377540 | -0.801834 | 7.469671e-49 | -8.615850e-47 |
| Msa0345330 | Msa1386690 | 0.814176 | 1.760656e-51 | -8.615850e-47 |
| Msa0345330 | Msa1386710 | 0.828810 | 7.309863e-55 | -8.615850e-47 |
| Msa0345330 | Msa1422950 | 0.819157 | 1.345820e-52 | -8.615850e-47 |
| Msa0345330 | Msa1423350 | 0.819128 | 1.366659e-52 | -8.615850e-47 |
| Msa0345330 | Msa1437940 | 0.831608 | 1.515687e-55 | -8.615850e-47 |
| Msa0345330 | Msa1440880 | 0.815874 | 7.392620e-52 | -8.615850e-47 |
| Msa0345330 | Msa1440960 | 0.815112 | 1.092556e-51 | -8.615850e-47 |
| Msa0345330 | Msa1445190 | 0.843238 | 1.584800e-58 | -8.615850e-47 |
| Msa0345330 | Msa1446810 | 0.831579 | 1.540962e-55 | -8.615850e-47 |
| Msa0345330 | Msa1451160 | 0.809338 | 1.988106e-50 | -8.615850e-47 |
| Msa0345330 | Msa1459180 | 0.802312 | 5.956405e-49 | -8.615850e-47 |
| Msa0345330 | Msa1459380 | 0.800387 | 1.476048e-48 | -8.615850e-47 |
| Msa0345330 | Msa1460020 | 0.805372 | 1.378410e-49 | -8.615850e-47 |
| Msa0345330 | Msa1461300 | 0.833886 | 4.121515e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345330 | MtrunA17_Chr3g0085291 | 96.257 | 187 | 7 | 0 | 1 | 187 | 1 | 187 | 2.61e-134 | 373 |
| Msa0345330 | MtrunA17_Chr3g0085311 | 91.534 | 189 | 14 | 1 | 1 | 187 | 1 | 189 | 8.86e-127 | 354 |
| Msa0345330 | MtrunA17_Chr3g0085301 | 65.079 | 189 | 64 | 2 | 1 | 187 | 6 | 194 | 1.38e-87 | 255 |
| Msa0345330 | MtrunA17_Chr3g0085321 | 63.492 | 189 | 67 | 1 | 1 | 187 | 1 | 189 | 1.02e-85 | 250 |
| Msa0345330 | MtrunA17_Chr4g0040551 | 61.878 | 181 | 62 | 2 | 8 | 186 | 9 | 184 | 2.65e-78 | 231 |
| Msa0345330 | MtrunA17_Chr3g0090231 | 60.541 | 185 | 66 | 2 | 4 | 186 | 5 | 184 | 3.35e-77 | 229 |
| Msa0345330 | MtrunA17_Chr1g0177051 | 46.739 | 184 | 89 | 4 | 10 | 186 | 4 | 185 | 1.61e-51 | 163 |
| Msa0345330 | MtrunA17_Chr4g0005081 | 52.027 | 148 | 67 | 1 | 43 | 186 | 49 | 196 | 8.18e-48 | 154 |
| Msa0345330 | MtrunA17_Chr4g0005071 | 50.000 | 148 | 70 | 1 | 43 | 186 | 48 | 195 | 3.03e-46 | 150 |
| Msa0345330 | MtrunA17_Chr4g0005031 | 46.497 | 157 | 78 | 2 | 34 | 186 | 66 | 220 | 2.31e-43 | 144 |
| Msa0345330 | MtrunA17_Chr7g0259091 | 50.336 | 149 | 69 | 2 | 43 | 186 | 45 | 193 | 6.57e-43 | 142 |
| Msa0345330 | MtrunA17_Chr4g0005041 | 47.682 | 151 | 75 | 2 | 40 | 186 | 47 | 197 | 6.98e-43 | 142 |
| Msa0345330 | MtrunA17_Chr1g0175911 | 44.022 | 184 | 96 | 4 | 8 | 186 | 10 | 191 | 3.12e-42 | 140 |
| Msa0345330 | MtrunA17_Chr7g0243501 | 43.011 | 186 | 98 | 3 | 7 | 186 | 8 | 191 | 3.19e-42 | 140 |
| Msa0345330 | MtrunA17_Chr7g0259071 | 47.651 | 149 | 73 | 2 | 43 | 186 | 42 | 190 | 2.49e-41 | 137 |
| Msa0345330 | MtrunA17_Chr4g0037481 | 42.208 | 154 | 82 | 2 | 38 | 186 | 40 | 191 | 3.37e-40 | 135 |
| Msa0345330 | MtrunA17_Chr7g0259101 | 50.336 | 149 | 69 | 2 | 43 | 186 | 45 | 193 | 4.81e-40 | 140 |
| Msa0345330 | MtrunA17_Chr7g0259101 | 47.651 | 149 | 73 | 2 | 43 | 186 | 244 | 392 | 2.00e-38 | 135 |
| Msa0345330 | MtrunA17_Chr4g0005111 | 40.816 | 147 | 84 | 1 | 43 | 186 | 43 | 189 | 1.01e-38 | 131 |
| Msa0345330 | MtrunA17_Chr4g0005011 | 45.161 | 155 | 77 | 3 | 34 | 184 | 44 | 194 | 1.08e-38 | 131 |
| Msa0345330 | MtrunA17_Chr5g0446751 | 38.220 | 191 | 97 | 5 | 7 | 186 | 8 | 188 | 1.78e-34 | 120 |
| Msa0345330 | MtrunA17_Chr3g0136631 | 42.384 | 151 | 80 | 2 | 43 | 186 | 38 | 188 | 1.08e-33 | 118 |
| Msa0345330 | MtrunA17_Chr3g0136641 | 42.384 | 151 | 79 | 3 | 43 | 186 | 38 | 187 | 3.03e-33 | 117 |
| Msa0345330 | MtrunA17_Chr4g0005131 | 41.781 | 146 | 80 | 1 | 46 | 186 | 45 | 190 | 3.09e-33 | 117 |
| Msa0345330 | MtrunA17_Chr7g0259121 | 44.156 | 154 | 75 | 5 | 43 | 186 | 40 | 192 | 2.89e-31 | 112 |
| Msa0345330 | MtrunA17_Chr4g0024961 | 30.519 | 154 | 103 | 1 | 38 | 187 | 25 | 178 | 7.65e-20 | 82.4 |
| Msa0345330 | MtrunA17_Chr4g0068391 | 32.738 | 168 | 93 | 3 | 3 | 166 | 8 | 159 | 1.08e-19 | 82.0 |
| Msa0345330 | MtrunA17_Chr4g0024951 | 30.769 | 182 | 110 | 3 | 10 | 187 | 9 | 178 | 1.22e-19 | 81.6 |
| Msa0345330 | MtrunA17_Chr4g0005091 | 32.903 | 155 | 86 | 2 | 36 | 186 | 34 | 174 | 3.12e-19 | 80.5 |
| Msa0345330 | MtrunA17_Chr4g0068381 | 32.414 | 145 | 94 | 1 | 46 | 186 | 35 | 179 | 3.99e-19 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345330 | AT1G65870.1 | 47.826 | 161 | 80 | 1 | 30 | 186 | 29 | 189 | 1.68e-46 | 151 |
| Msa0345330 | AT5G42500.1 | 45.399 | 163 | 83 | 2 | 28 | 186 | 25 | 185 | 2.28e-45 | 148 |
| Msa0345330 | AT2G21100.1 | 42.763 | 152 | 83 | 1 | 39 | 186 | 36 | 187 | 4.15e-42 | 140 |
| Msa0345330 | AT2G21100.2 | 42.763 | 152 | 83 | 1 | 39 | 186 | 36 | 187 | 4.15e-42 | 140 |
| Msa0345330 | AT1G22900.1 | 45.161 | 155 | 79 | 2 | 36 | 186 | 41 | 193 | 1.26e-41 | 139 |
| Msa0345330 | AT5G42510.1 | 45.806 | 155 | 78 | 3 | 36 | 186 | 30 | 182 | 3.43e-41 | 137 |
| Msa0345330 | AT1G55210.1 | 44.595 | 148 | 81 | 1 | 40 | 186 | 39 | 186 | 1.73e-38 | 130 |
| Msa0345330 | AT1G55210.2 | 44.595 | 148 | 81 | 1 | 40 | 186 | 39 | 186 | 1.73e-38 | 130 |
| Msa0345330 | AT3G13650.1 | 44.138 | 145 | 80 | 1 | 43 | 186 | 41 | 185 | 3.03e-38 | 130 |
| Msa0345330 | AT1G58170.1 | 37.895 | 190 | 108 | 3 | 1 | 186 | 1 | 184 | 1.06e-37 | 129 |
| Msa0345330 | AT5G49040.1 | 43.624 | 149 | 78 | 3 | 43 | 186 | 43 | 190 | 8.94e-37 | 126 |
| Msa0345330 | AT5G49030.3 | 47.656 | 128 | 63 | 1 | 43 | 166 | 43 | 170 | 1.47e-33 | 126 |
| Msa0345330 | AT3G13662.1 | 46.400 | 125 | 66 | 1 | 43 | 166 | 40 | 164 | 1.00e-32 | 115 |
| Msa0345330 | AT3G58090.1 | 52.336 | 107 | 51 | 0 | 80 | 186 | 165 | 271 | 7.72e-32 | 116 |
| Msa0345330 | AT4G38700.1 | 42.857 | 154 | 78 | 3 | 43 | 186 | 36 | 189 | 1.42e-31 | 113 |
| Msa0345330 | AT2G21110.1 | 33.871 | 186 | 104 | 4 | 9 | 186 | 11 | 185 | 2.86e-29 | 107 |
| Msa0345330 | AT3G13660.1 | 38.710 | 124 | 76 | 0 | 63 | 186 | 1 | 124 | 1.34e-25 | 95.9 |
| Msa0345330 | AT4G11210.1 | 29.032 | 186 | 123 | 5 | 1 | 184 | 1 | 179 | 1.23e-16 | 74.3 |
| Msa0345330 | AT4G23690.1 | 33.071 | 127 | 78 | 3 | 43 | 163 | 38 | 163 | 1.21e-11 | 60.8 |
Find 37 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTACTGCTAAGAGTGTT+TGG | 0.319714 | 3_1:-4520762 | Msa0345330:CDS |
| TTGGCGGCACCGGCGTGTTT+AGG | 0.334517 | 3_1:-4520798 | Msa0345330:CDS |
| TCAGTGCTTTGTTGATTTGT+TGG | 0.368171 | 3_1:+4521138 | None:intergenic |
| CTGCCTATTGTTGGCGGCAC+CGG | 0.371881 | 3_1:-4520808 | Msa0345330:CDS |
| CCATCAAATACAGTTGGGTT+TGG | 0.383222 | 3_1:-4521039 | Msa0345330:CDS |
| CCGGCGTGTTTAGGTTTGCT+AGG | 0.384387 | 3_1:-4520789 | Msa0345330:CDS |
| AGCTCAAGGGATGTTTGGTT+TGG | 0.396536 | 3_1:-4520950 | Msa0345330:CDS |
| ACGCCGGTGCCGCCAACAAT+AGG | 0.397084 | 3_1:+4520805 | None:intergenic |
| CCAAACCCAACTGTATTTGA+TGG | 0.400788 | 3_1:+4521039 | None:intergenic |
| TCTCTAACCGTGTCTTGAAC+AGG | 0.414606 | 3_1:+4520832 | None:intergenic |
| TGCTACTGCTAAGAGTGTTT+GGG | 0.423437 | 3_1:-4520761 | Msa0345330:CDS |
| GCTCTTGTCCTTCAGTTAAG+AGG | 0.424118 | 3_1:+4520995 | None:intergenic |
| GGTAGAGCTCAAGGGATGTT+TGG | 0.428431 | 3_1:-4520955 | Msa0345330:CDS |
| CGGCGTGTTTAGGTTTGCTA+GGG | 0.449156 | 3_1:-4520788 | Msa0345330:CDS |
| ATTTGTTGGTAACATGATGT+TGG | 0.455637 | 3_1:+4521152 | None:intergenic |
| TCAATAATTTGTACAACCGT+TGG | 0.456883 | 3_1:+4521063 | None:intergenic |
| TAACATGATGTTGGATTGTT+CGG | 0.468734 | 3_1:+4521161 | None:intergenic |
| GGTAGTACTCTTAGTATGCT+TGG | 0.469670 | 3_1:-4520862 | Msa0345330:CDS |
| GTTAGAGAACTGCCTATTGT+TGG | 0.476698 | 3_1:-4520817 | Msa0345330:CDS |
| ATTAATCTTGCTTTCACCGA+TGG | 0.478192 | 3_1:-4520895 | Msa0345330:CDS |
| ATTGATCCATCAAATACAGT+TGG | 0.481548 | 3_1:-4521045 | Msa0345330:CDS |
| TTGATCCATCAAATACAGTT+GGG | 0.483436 | 3_1:-4521044 | Msa0345330:CDS |
| AAACCTGTCGGTAGAGCTCA+AGG | 0.523725 | 3_1:-4520964 | Msa0345330:CDS |
| GTTTGGAGCAAGTTACATGA+TGG | 0.529133 | 3_1:-4521022 | Msa0345330:CDS |
| AGAGAACTGCCTATTGTTGG+CGG | 0.541168 | 3_1:-4520814 | Msa0345330:CDS |
| ATCCCTTGAGCTCTACCGAC+AGG | 0.544812 | 3_1:+4520961 | None:intergenic |
| GTACTCTTAGTATGCTTGGA+AGG | 0.545035 | 3_1:-4520858 | Msa0345330:CDS |
| TTGTTCGGAGAACACTCCAT+TGG | 0.582295 | 3_1:+4521176 | None:intergenic |
| ATGGACAACCTCTTAACTGA+AGG | 0.591801 | 3_1:-4521003 | Msa0345330:CDS |
| TTGGCATCTTTGCATGATCG+TGG | 0.594187 | 3_1:-4520931 | Msa0345330:CDS |
| ATCTTTGCATGATCGTGGAA+TGG | 0.599273 | 3_1:-4520926 | Msa0345330:CDS |
| GAGCTAACATCAAAACCTGT+CGG | 0.634037 | 3_1:-4520976 | Msa0345330:CDS |
| GGCGTGTTTAGGTTTGCTAG+GGG | 0.673525 | 3_1:-4520787 | Msa0345330:CDS |
| AAGGAATCCTGTTCAAGACA+CGG | 0.674439 | 3_1:-4520839 | Msa0345330:CDS |
| ACTACCAGCAAAATCACCAT+CGG | 0.683340 | 3_1:+4520879 | None:intergenic |
| AACCTGTCGGTAGAGCTCAA+GGG | 0.694023 | 3_1:-4520963 | Msa0345330:CDS |
| CCTAGCAAACCTAAACACGC+CGG | 0.714305 | 3_1:+4520789 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGGTAAAAAAAGTGCAAAT+GGG | + | chr3_1:4520841-4520860 | None:intergenic | 25.0% |
| TAACATGATGTTGGATTGTT+CGG | + | chr3_1:4520787-4520806 | None:intergenic | 30.0% | |
| !! | ATTTGTTGGTAACATGATGT+TGG | + | chr3_1:4520796-4520815 | None:intergenic | 30.0% |
| ! | CATGGTAAAAAAAGTGCAAA+TGG | + | chr3_1:4520842-4520861 | None:intergenic | 30.0% |
| ! | TTTTACCATGACATCTTAGA+AGG | - | chr3_1:4520852-4520871 | Msa0345330:CDS | 30.0% |
| !!! | TTTTACCTTCTAAGATGTCA+TGG | + | chr3_1:4520860-4520879 | None:intergenic | 30.0% |
| CTTAGAAGGTAAAAATCCAA+CGG | - | chr3_1:4520866-4520885 | Msa0345330:CDS | 30.0% | |
| ! | TCAATAATTTGTACAACCGT+TGG | + | chr3_1:4520885-4520904 | None:intergenic | 30.0% |
| ATTGATCCATCAAATACAGT+TGG | - | chr3_1:4520900-4520919 | Msa0345330:CDS | 30.0% | |
| TTGATCCATCAAATACAGTT+GGG | - | chr3_1:4520901-4520920 | Msa0345330:CDS | 30.0% | |
| ! | GCTCAATTTTTCACTACCAA+TGG | - | chr3_1:4520753-4520772 | Msa0345330:CDS | 35.0% |
| !! | TCAGTGCTTTGTTGATTTGT+TGG | + | chr3_1:4520810-4520829 | None:intergenic | 35.0% |
| ATTAATCTTGCTTTCACCGA+TGG | - | chr3_1:4521050-4521069 | Msa0345330:CDS | 35.0% | |
| CCAAACCCAACTGTATTTGA+TGG | + | chr3_1:4520909-4520928 | None:intergenic | 40.0% | |
| CCATCAAATACAGTTGGGTT+TGG | - | chr3_1:4520906-4520925 | Msa0345330:CDS | 40.0% | |
| ! | GTTTGGAGCAAGTTACATGA+TGG | - | chr3_1:4520923-4520942 | Msa0345330:CDS | 40.0% |
| ATGGACAACCTCTTAACTGA+AGG | - | chr3_1:4520942-4520961 | Msa0345330:CDS | 40.0% | |
| GAGCTAACATCAAAACCTGT+CGG | - | chr3_1:4520969-4520988 | Msa0345330:CDS | 40.0% | |
| ATCTTTGCATGATCGTGGAA+TGG | - | chr3_1:4521019-4521038 | Msa0345330:CDS | 40.0% | |
| ACTACCAGCAAAATCACCAT+CGG | + | chr3_1:4521069-4521088 | None:intergenic | 40.0% | |
| GGTAGTACTCTTAGTATGCT+TGG | - | chr3_1:4521083-4521102 | Msa0345330:CDS | 40.0% | |
| GTACTCTTAGTATGCTTGGA+AGG | - | chr3_1:4521087-4521106 | Msa0345330:CDS | 40.0% | |
| AAGGAATCCTGTTCAAGACA+CGG | - | chr3_1:4521106-4521125 | Msa0345330:CDS | 40.0% | |
| GTTAGAGAACTGCCTATTGT+TGG | - | chr3_1:4521128-4521147 | Msa0345330:CDS | 40.0% | |
| !! | ATGCTACTGCTAAGAGTGTT+TGG | - | chr3_1:4521183-4521202 | Msa0345330:CDS | 40.0% |
| !! | TGCTACTGCTAAGAGTGTTT+GGG | - | chr3_1:4521184-4521203 | Msa0345330:CDS | 40.0% |
| TTGTTCGGAGAACACTCCAT+TGG | + | chr3_1:4520772-4520791 | None:intergenic | 45.0% | |
| GCTCTTGTCCTTCAGTTAAG+AGG | + | chr3_1:4520953-4520972 | None:intergenic | 45.0% | |
| AGCTCAAGGGATGTTTGGTT+TGG | - | chr3_1:4520995-4521014 | Msa0345330:CDS | 45.0% | |
| TTGGCATCTTTGCATGATCG+TGG | - | chr3_1:4521014-4521033 | Msa0345330:CDS | 45.0% | |
| ! | TTCACCGATGGTGATTTTGC+TGG | - | chr3_1:4521062-4521081 | Msa0345330:CDS | 45.0% |
| TCTCTAACCGTGTCTTGAAC+AGG | + | chr3_1:4521116-4521135 | None:intergenic | 45.0% | |
| AGAGAACTGCCTATTGTTGG+CGG | - | chr3_1:4521131-4521150 | Msa0345330:CDS | 45.0% | |
| AAACCTGTCGGTAGAGCTCA+AGG | - | chr3_1:4520981-4521000 | Msa0345330:CDS | 50.0% | |
| AACCTGTCGGTAGAGCTCAA+GGG | - | chr3_1:4520982-4521001 | Msa0345330:CDS | 50.0% | |
| GGTAGAGCTCAAGGGATGTT+TGG | - | chr3_1:4520990-4521009 | Msa0345330:CDS | 50.0% | |
| CCTAGCAAACCTAAACACGC+CGG | + | chr3_1:4521159-4521178 | None:intergenic | 50.0% | |
| !! | CGGCGTGTTTAGGTTTGCTA+GGG | - | chr3_1:4521157-4521176 | Msa0345330:CDS | 50.0% |
| !! | GGCGTGTTTAGGTTTGCTAG+GGG | - | chr3_1:4521158-4521177 | Msa0345330:CDS | 50.0% |
| ATCCCTTGAGCTCTACCGAC+AGG | + | chr3_1:4520987-4521006 | None:intergenic | 55.0% | |
| ! | CCGGCGTGTTTAGGTTTGCT+AGG | - | chr3_1:4521156-4521175 | Msa0345330:CDS | 55.0% |
| CTGCCTATTGTTGGCGGCAC+CGG | - | chr3_1:4521137-4521156 | Msa0345330:CDS | 60.0% | |
| !! | ACGCCGGTGCCGCCAACAAT+AGG | + | chr3_1:4521143-4521162 | None:intergenic | 65.0% |
| !! | TTGGCGGCACCGGCGTGTTT+AGG | - | chr3_1:4521147-4521166 | Msa0345330:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 4520702 | 4521265 | 4520702 | ID=Msa0345330;Name=Msa0345330 |
| chr3_1 | mRNA | 4520702 | 4521265 | 4520702 | ID=Msa0345330-mRNA-1;Parent=Msa0345330;Name=Msa0345330-mRNA-1;_AED=0.24;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|187 |
| chr3_1 | exon | 4520702 | 4521265 | 4520702 | ID=Msa0345330-mRNA-1:exon:1474;Parent=Msa0345330-mRNA-1 |
| chr3_1 | CDS | 4520702 | 4521265 | 4520702 | ID=Msa0345330-mRNA-1:cds;Parent=Msa0345330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
