Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495820 | XP_003599380.1 | 94.152 | 342 | 9 | 2 | 1 | 333 | 1 | 340 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495820 | sp|Q9LM02|SMT1_ARATH | 81.306 | 337 | 52 | 2 | 1 | 328 | 1 | 335 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495820 | B7FHU0 | 94.152 | 342 | 9 | 2 | 1 | 333 | 1 | 340 | 0.0 | 661 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031080 | Msa0495820 | 0.803812 | 2.914961e-49 | -8.615850e-47 |
| Msa0495820 | Msa1070360 | 0.802052 | 6.734896e-49 | -8.615850e-47 |
| Msa0495820 | Msa1124210 | 0.811918 | 5.505481e-51 | -8.615850e-47 |
| Msa0495820 | Msa1333210 | 0.805141 | 1.540773e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495820 | MtrunA17_Chr3g0089671 | 94.152 | 342 | 9 | 2 | 1 | 333 | 1 | 340 | 0.0 | 661 |
| Msa0495820 | MtrunA17_Chr3g0143441 | 38.757 | 338 | 178 | 6 | 8 | 333 | 39 | 359 | 2.64e-74 | 233 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495820 | AT5G13710.1 | 81.306 | 337 | 52 | 2 | 1 | 328 | 1 | 335 | 0.0 | 580 |
| Msa0495820 | AT5G13710.2 | 81.306 | 337 | 52 | 2 | 1 | 328 | 1 | 335 | 0.0 | 580 |
| Msa0495820 | AT1G20330.1 | 39.583 | 336 | 172 | 7 | 8 | 330 | 39 | 356 | 4.22e-76 | 238 |
| Msa0495820 | AT1G76090.1 | 38.596 | 342 | 180 | 7 | 4 | 332 | 34 | 358 | 4.26e-74 | 233 |
Find 88 sgRNAs with CRISPR-Local
Find 461 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTCAATATGTTAAAAT+TGG | 0.172129 | 3_4:-25438259 | Msa0495820:three_prime_UTR |
| CAGAAGCAATACCATATTTC+TGG | 0.200578 | 3_4:+25439815 | None:intergenic |
| TTATGAGTTACTGTGATTCT+AGG | 0.274822 | 3_4:-25438486 | Msa0495820:three_prime_UTR |
| TTTAAGTTGCTTGATTGTTT+AGG | 0.289919 | 3_4:-25438415 | Msa0495820:three_prime_UTR |
| ATGGACACCTTGTTGCAAAA+TGG | 0.313547 | 3_4:+25443266 | None:intergenic |
| TCTTCCTTGGTACTTGCCTT+TGG | 0.316688 | 3_4:-25439895 | Msa0495820:CDS |
| CAGGCACTCAATCGCAAAAC+TGG | 0.331030 | 3_4:-25442086 | Msa0495820:CDS |
| AAAAGAATTATAATTGTGTT+TGG | 0.348275 | 3_4:-25438462 | Msa0495820:three_prime_UTR |
| TAATGAATTTATCAATTTAA+CGG | 0.348839 | 3_4:+25438231 | None:intergenic |
| CACTTCCTTGCTTTACAACT+TGG | 0.357247 | 3_4:-25443124 | Msa0495820:CDS |
| CAATGTGCTTCCTGCATTAG+TGG | 0.366041 | 3_4:-25438356 | Msa0495820:three_prime_UTR |
| GAAAGCTAATTATAGTGATA+TGG | 0.367025 | 3_4:-25444006 | Msa0495820:intron |
| ACTGAATAAGTGGAACAAAT+AGG | 0.367351 | 3_4:-25438518 | Msa0495820:exon |
| TGCAGCTCGACATCTGTTAC+CGG | 0.394305 | 3_4:-25442472 | Msa0495820:CDS |
| ATACCTTTCCCCTGGTGATC+TGG | 0.394747 | 3_4:+25442431 | None:intergenic |
| AAGGAAAGAGGACAAAGATA+TGG | 0.396648 | 3_4:+25446632 | None:intergenic |
| GTGAAGGCTCTGGAGTTTGT+TGG | 0.407221 | 3_4:-25439490 | Msa0495820:CDS |
| TGAACCCTTTGACTCCCCTT+GGG | 0.410674 | 3_4:+25439460 | None:intergenic |
| TAGAGCTTCAAGACACTTTG+TGG | 0.411789 | 3_4:+25440394 | None:intergenic |
| ATTCAGTTGCTTTCTGAAGC+AGG | 0.422845 | 3_4:+25438534 | None:intergenic |
| TCTTCCGCTGCAGATGGGTA+GGG | 0.426640 | 3_4:-25443180 | Msa0495820:intron |
| GCCAAATCCATTGCTTGAAA+AGG | 0.428187 | 3_4:+25446407 | None:intergenic |
| AATATTTCACATACAGCATC+TGG | 0.437219 | 3_4:+25440903 | None:intergenic |
| TTGAACCCTTTGACTCCCCT+TGG | 0.438466 | 3_4:+25439459 | None:intergenic |
| ACTTAAAACAGCAATACTTA+TGG | 0.442121 | 3_4:+25438431 | None:intergenic |
| ATGGATTTGGCTTCGAATCT+CGG | 0.452661 | 3_4:-25446395 | Msa0495820:CDS |
| TCAGAAAGCAACTGAATAAG+TGG | 0.457259 | 3_4:-25438528 | Msa0495820:exon |
| AAAGATGAAAACCTTCTGTC+CGG | 0.459180 | 3_4:+25443093 | None:intergenic |
| CATCAGACTCTCCTCTTCCT+TGG | 0.464927 | 3_4:-25439908 | Msa0495820:CDS |
| TCAATATGTTAAAATTGGAC+CGG | 0.481799 | 3_4:-25438254 | Msa0495820:three_prime_UTR |
| ATACCATATTTCTGGTGAAA+AGG | 0.482576 | 3_4:+25439823 | None:intergenic |
| GTTTGTTGGACTTGCTCCCA+AGG | 0.488709 | 3_4:-25439476 | Msa0495820:CDS |
| CTTCCGCTGCAGATGGGTAG+GGG | 0.489356 | 3_4:-25443179 | Msa0495820:intron |
| CTGCAGGCAGAAATTGAGAT+TGG | 0.490804 | 3_4:-25440443 | Msa0495820:intron |
| GTACTCGTTATTATTCAATC+CGG | 0.500109 | 3_4:+25442453 | None:intergenic |
| GAATTTATCAATTTAACGGC+CGG | 0.501044 | 3_4:+25438235 | None:intergenic |
| GCTGCAGAGGGTCTAGTTGA+AGG | 0.505379 | 3_4:-25439421 | Msa0495820:CDS |
| ACATTTGTAGGTGAAGGCTC+TGG | 0.507945 | 3_4:-25439500 | Msa0495820:intron |
| GAGAAGTATCATGCATCCTA+TGG | 0.508363 | 3_4:-25444047 | Msa0495820:CDS |
| TTGCTCCCAAGGGGAGTCAA+AGG | 0.513667 | 3_4:-25439465 | Msa0495820:CDS |
| TTTGTATGTGAAGGTCATAT+GGG | 0.514447 | 3_4:-25439943 | Msa0495820:intron |
| TTCTTCCGCTGCAGATGGGT+AGG | 0.514609 | 3_4:-25443181 | Msa0495820:intron |
| AGCTTCCGTCTAACGGCTGT+TGG | 0.514924 | 3_4:-25439849 | Msa0495820:CDS |
| AAAGGCAAGTACCAAGGAAG+AGG | 0.518855 | 3_4:+25439897 | None:intergenic |
| TACAGCATCTGGTGCATGGC+AGG | 0.521675 | 3_4:+25440914 | None:intergenic |
| ATTTATAGAGTGTTAAAGCC+TGG | 0.522060 | 3_4:-25440621 | Msa0495820:CDS |
| TAAGCAGCAAAACATTGGCC+AGG | 0.524306 | 3_4:+25440603 | None:intergenic |
| GCAGAAATTGAGATTGGTGA+TGG | 0.534551 | 3_4:-25440437 | Msa0495820:CDS |
| GGTTCAAGATTTCCTTGAGA+AGG | 0.535966 | 3_4:-25439443 | Msa0495820:CDS |
| GACCCTCTGCAGCCTTCTCA+AGG | 0.541641 | 3_4:+25439431 | None:intergenic |
| ACTACACTATCCACTAATGC+AGG | 0.541848 | 3_4:+25438346 | None:intergenic |
| TTTGTGGTCAATCTAATGTC+AGG | 0.541951 | 3_4:+25440410 | None:intergenic |
| ACTTAGCAGCTTCCGTCTAA+CGG | 0.542702 | 3_4:-25439856 | Msa0495820:CDS |
| TTCATCCTCTTGACCTCCAT+AGG | 0.544369 | 3_4:+25444031 | None:intergenic |
| GGCGTCCAACAGCCGTTAGA+CGG | 0.545051 | 3_4:+25439844 | None:intergenic |
| CTTGAAGCTCTAAAGCAAGC+AGG | 0.547652 | 3_4:-25440383 | Msa0495820:CDS |
| TTTGTTGGACTTGCTCCCAA+GGG | 0.550647 | 3_4:-25439475 | Msa0495820:CDS |
| TGGTCTTAAGCCCGGACAGA+AGG | 0.551005 | 3_4:-25443104 | Msa0495820:intron |
| TTACAACTTGGTCTTAAGCC+CGG | 0.554828 | 3_4:-25443112 | Msa0495820:CDS |
| TTCCTTGAGAAGGCTGCAGA+GGG | 0.556231 | 3_4:-25439433 | Msa0495820:CDS |
| AAGATGAAAACCTTCTGTCC+GGG | 0.556269 | 3_4:+25443094 | None:intergenic |
| ATTCATAAGCAGCAAAACAT+TGG | 0.559750 | 3_4:+25440598 | None:intergenic |
| TGCTCCCAAGGGGAGTCAAA+GGG | 0.560093 | 3_4:-25439464 | Msa0495820:CDS |
| ATGGAGGTCAAGAGGATGAA+AGG | 0.562038 | 3_4:-25444028 | Msa0495820:CDS |
| TAAAACAGCAATACTTATGG+TGG | 0.567579 | 3_4:+25438434 | None:intergenic |
| CACATACAGCATCTGGTGCA+TGG | 0.575106 | 3_4:+25440910 | None:intergenic |
| TCAAAACTATTGTCTTCGAA+TGG | 0.577172 | 3_4:+25440960 | None:intergenic |
| CAGAAATTGAGATTGGTGAT+GGG | 0.583752 | 3_4:-25440436 | Msa0495820:CDS |
| TTTCCTTGAGAAGGCTGCAG+AGG | 0.588645 | 3_4:-25439434 | Msa0495820:CDS |
| ATAACGAGTACCAGATCACC+AGG | 0.590364 | 3_4:-25442441 | Msa0495820:CDS |
| TAAGACCAAGTTGTAAAGCA+AGG | 0.600321 | 3_4:+25443119 | None:intergenic |
| GTACCAGATCACCAGGGGAA+AGG | 0.607731 | 3_4:-25442434 | Msa0495820:intron |
| TGCATCCTATGGAGGTCAAG+AGG | 0.610680 | 3_4:-25444036 | Msa0495820:CDS |
| CAAAACACATACCTTTCCCC+TGG | 0.613010 | 3_4:+25442423 | None:intergenic |
| AGCATCTGGTGCATGGCAGG+TGG | 0.619604 | 3_4:+25440917 | None:intergenic |
| TTGTTGGACTTGCTCCCAAG+GGG | 0.628720 | 3_4:-25439474 | Msa0495820:CDS |
| GAGAAGTGACTCTTGTCCAA+AGG | 0.629432 | 3_4:+25439879 | None:intergenic |
| GCAGAGGGTCTAGTTGAAGG+TGG | 0.639355 | 3_4:-25439418 | Msa0495820:CDS |
| AAGTATCATGCATCCTATGG+AGG | 0.651186 | 3_4:-25444044 | Msa0495820:CDS |
| GAGAGTGACGCACTTATCGA+CGG | 0.652498 | 3_4:+25446340 | None:intergenic |
| CAAGACTTGCAACTTCGTCA+AGG | 0.656952 | 3_4:-25442057 | Msa0495820:intron |
| TTGTCCAAAGGCAAGTACCA+AGG | 0.664739 | 3_4:+25439891 | None:intergenic |
| ACTCAATCGCAAAACTGGAG+TGG | 0.680106 | 3_4:-25442081 | Msa0495820:CDS |
| GATTTGGCTTCGAATCTCGG+TGG | 0.689368 | 3_4:-25446392 | Msa0495820:CDS |
| AACGAGTACCAGATCACCAG+GGG | 0.706914 | 3_4:-25442439 | Msa0495820:CDS |
| TAACGAGTACCAGATCACCA+GGG | 0.744545 | 3_4:-25442440 | Msa0495820:CDS |
| GTGTAATTTAGATCGAAACG+AGG | 0.758490 | 3_4:-25446453 | Msa0495820:intron |
| AGTGACGCACTTATCGACGG+CGG | 0.770311 | 3_4:+25446343 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAAATATAAAATTTAT+TGG | - | chr3_4:25439980-25439999 | Msa0495820:intron | 0.0% |
| !! | ATAAAATAAAAAAATAACAC+AGG | + | chr3_4:25438715-25438734 | None:intergenic | 10.0% |
| !!! | ATAAATCATTGATTTATAAA+AGG | + | chr3_4:25442812-25442831 | None:intergenic | 10.0% |
| !!! | ATCAATGATTTATATTTTTT+AGG | - | chr3_4:25442819-25442838 | Msa0495820:intron | 10.0% |
| !! | TTTATTCAATATGTTAAAAT+TGG | - | chr3_4:25446580-25446599 | Msa0495820:five_prime_UTR | 10.0% |
| !! | TAATGAATTTATCAATTTAA+CGG | + | chr3_4:25446611-25446630 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTTGATTTTGA+AGG | - | chr3_4:25438670-25438689 | Msa0495820:intron | 15.0% |
| !!! | AATTTTATTCAGAAAAATGA+TGG | - | chr3_4:25438782-25438801 | Msa0495820:intron | 15.0% |
| !! | AAAAGAAATTTATCCAAATA+GGG | + | chr3_4:25440273-25440292 | None:intergenic | 15.0% |
| !! | AAAAAGAAATTTATCCAAAT+AGG | + | chr3_4:25440274-25440293 | None:intergenic | 15.0% |
| !!! | CAAAAATTTTAACAAGTTAA+TGG | - | chr3_4:25440702-25440721 | Msa0495820:intron | 15.0% |
| !! | AAGTATATTCTAAATTTGAT+TGG | + | chr3_4:25441119-25441138 | None:intergenic | 15.0% |
| !! | ATATAATTAAAACTAACACA+TGG | + | chr3_4:25441442-25441461 | None:intergenic | 15.0% |
| !!! | CTTTTTCTTTATTTGATTTT+AGG | - | chr3_4:25441842-25441861 | Msa0495820:intron | 15.0% |
| !!! | GAGAACAATTTTAAAAATAT+TGG | + | chr3_4:25442878-25442897 | None:intergenic | 15.0% |
| !!! | TATTTTATTTATACGTTGTT+TGG | - | chr3_4:25442924-25442943 | Msa0495820:intron | 15.0% |
| !!! | ATCATTATCGTTTTATTATT+AGG | + | chr3_4:25443798-25443817 | None:intergenic | 15.0% |
| !! | AGATTATTCACTATTTATTT+AGG | + | chr3_4:25444688-25444707 | None:intergenic | 15.0% |
| !! | AATAAATAGTGAATAATCTA+AGG | - | chr3_4:25444689-25444708 | Msa0495820:intron | 15.0% |
| !! | AATTATAAATTAAGATTGAG+AGG | - | chr3_4:25445723-25445742 | Msa0495820:intron | 15.0% |
| !!! | ATTTAAAAGAGTTTTAAAGA+TGG | + | chr3_4:25446131-25446150 | None:intergenic | 15.0% |
| !! | AAAAGAATTATAATTGTGTT+TGG | - | chr3_4:25446377-25446396 | Msa0495820:CDS | 15.0% |
| !! | GATGAAAAAAAAAGTGAAAT+GGG | + | chr3_4:25438349-25438368 | None:intergenic | 20.0% |
| !! | AGATGAAAAAAAAAGTGAAA+TGG | + | chr3_4:25438350-25438369 | None:intergenic | 20.0% |
| !! | TATCATTTCAAACAAAATCT+AGG | + | chr3_4:25439387-25439406 | None:intergenic | 20.0% |
| !!! | ATGTTTTAGATTTTGTAGTA+AGG | - | chr3_4:25439504-25439523 | Msa0495820:intron | 20.0% |
| !!! | TAATGAGTTGAATCAAAATA+TGG | - | chr3_4:25439606-25439625 | Msa0495820:intron | 20.0% |
| !! | AAATATGGTGTATATTGAAT+TGG | - | chr3_4:25439621-25439640 | Msa0495820:intron | 20.0% |
| !! | TAAGCATTTATCATGATAAA+CGG | + | chr3_4:25440315-25440334 | None:intergenic | 20.0% |
| !!! | ACTATTTTCATAAGATATCT+TGG | - | chr3_4:25440406-25440425 | Msa0495820:CDS | 20.0% |
| !!! | AATGATCAATACATTTTATC+AGG | + | chr3_4:25440758-25440777 | None:intergenic | 20.0% |
| !!! | GATAAAATGTATTGATCATT+TGG | - | chr3_4:25440758-25440777 | Msa0495820:intron | 20.0% |
| !!! | GCTAATTATCAGTAATATTT+TGG | + | chr3_4:25440882-25440901 | None:intergenic | 20.0% |
| !!! | TATAACATGATTTGTATAGA+TGG | - | chr3_4:25441411-25441430 | Msa0495820:intron | 20.0% |
| !!! | ATAACATGATTTGTATAGAT+GGG | - | chr3_4:25441412-25441431 | Msa0495820:intron | 20.0% |
| !!! | TAAGATCTTCATATATTTTC+AGG | - | chr3_4:25441492-25441511 | Msa0495820:intron | 20.0% |
| !! | ATGTCCAAAAATGAATAAAA+TGG | + | chr3_4:25441595-25441614 | None:intergenic | 20.0% |
| !!! | CTTTATTTGATTTTAGGTTT+TGG | - | chr3_4:25441848-25441867 | Msa0495820:intron | 20.0% |
| !! | ACAAAAATATTGTCAAATAG+CGG | - | chr3_4:25442047-25442066 | Msa0495820:intron | 20.0% |
| !! | TTGCTTACAAAAATCATTAA+GGG | - | chr3_4:25442337-25442356 | Msa0495820:intron | 20.0% |
| !! | TTTAAAAACTAGATATGAGA+AGG | + | chr3_4:25442470-25442489 | None:intergenic | 20.0% |
| !!! | TCTAGTTTTTAAAGCTTTAT+AGG | - | chr3_4:25442477-25442496 | Msa0495820:CDS | 20.0% |
| !!! | TAATAGTCTTTTCATCAATA+AGG | + | chr3_4:25442642-25442661 | None:intergenic | 20.0% |
| !!! | TGATTTATATTTTTTAGGAG+TGG | - | chr3_4:25442824-25442843 | Msa0495820:intron | 20.0% |
| !!! | GATTTATATTTTTTAGGAGT+GGG | - | chr3_4:25442825-25442844 | Msa0495820:intron | 20.0% |
| !! | AACGTATAAATAAAATATCC+AGG | + | chr3_4:25442921-25442940 | None:intergenic | 20.0% |
| !! | ATTAAGAATCATAATTGACA+TGG | - | chr3_4:25443816-25443835 | Msa0495820:intron | 20.0% |
| !!! | TTAATCTTATTTGATAATGC+AGG | - | chr3_4:25443839-25443858 | Msa0495820:intron | 20.0% |
| !!! | TTTTTGTATTATGCTTAGTA+TGG | - | chr3_4:25444182-25444201 | Msa0495820:intron | 20.0% |
| !! | AAATATATAATACTCGTGAA+AGG | + | chr3_4:25444517-25444536 | None:intergenic | 20.0% |
| !!! | TCTATGTTTTCCTATAAATA+GGG | + | chr3_4:25444659-25444678 | None:intergenic | 20.0% |
| !!! | GATATTATTCTAGAATATCT+TGG | + | chr3_4:25444791-25444810 | None:intergenic | 20.0% |
| !! | TGTTATGAATTTACATTTGT+AGG | - | chr3_4:25445327-25445346 | Msa0495820:intron | 20.0% |
| !!! | ATAGTTTTTCAACTTAAATG+AGG | - | chr3_4:25445480-25445499 | Msa0495820:intron | 20.0% |
| !!! | TTTGAAATTAATAATGAAGC+AGG | + | chr3_4:25445807-25445826 | None:intergenic | 20.0% |
| !! | AAATTATGTTACAAGAGTTA+AGG | - | chr3_4:25445825-25445844 | Msa0495820:intron | 20.0% |
| !!! | TTTTCATAAGCTCAAAAATA+AGG | + | chr3_4:25445864-25445883 | None:intergenic | 20.0% |
| !!! | TTATTTTTCATAATCTGTCA+AGG | + | chr3_4:25445978-25445997 | None:intergenic | 20.0% |
| !! | AAAAAATAAGTCAATCCAAA+CGG | - | chr3_4:25446025-25446044 | Msa0495820:intron | 20.0% |
| !! | AATACTAAATTGATTAACAC+TGG | - | chr3_4:25446181-25446200 | Msa0495820:intron | 20.0% |
| ! | AAAAGAAAGAAAAAGGAAAG+AGG | + | chr3_4:25438222-25438241 | None:intergenic | 25.0% |
| !!! | GCGTTTTAAAAGAAAGAAAA+AGG | + | chr3_4:25438229-25438248 | None:intergenic | 25.0% |
| !! | AAAAGTGTAAATTCACAATG+TGG | + | chr3_4:25438540-25438559 | None:intergenic | 25.0% |
| ! | AAGCTGAAACAGTAAAAATA+AGG | + | chr3_4:25438610-25438629 | None:intergenic | 25.0% |
| ! | CACAAAATTGGGTAATTAAT+AGG | - | chr3_4:25439195-25439214 | Msa0495820:intron | 25.0% |
| !! | TGAGAGAATTGATTTATGTT+TGG | - | chr3_4:25439796-25439815 | Msa0495820:intron | 25.0% |
| ! | TAAACAAACAGAATGTTGTT+TGG | - | chr3_4:25439840-25439859 | Msa0495820:CDS | 25.0% |
| ! | ACTAAAATAGACATAGCTAA+AGG | - | chr3_4:25439899-25439918 | Msa0495820:CDS | 25.0% |
| ! | TAAAGGAGAATTGATAAAGA+AGG | - | chr3_4:25439916-25439935 | Msa0495820:CDS | 25.0% |
| ! | TAAAGAAGGAGAATTGATAA+AGG | - | chr3_4:25439930-25439949 | Msa0495820:CDS | 25.0% |
| ! | AAAGAAGGAGAATTGATAAA+GGG | - | chr3_4:25439931-25439950 | Msa0495820:CDS | 25.0% |
| !! | GAATATTGTAGAATTGCTTT+TGG | - | chr3_4:25440104-25440123 | Msa0495820:intron | 25.0% |
| ! | TACAATGTGAAGTCAAAATA+TGG | + | chr3_4:25440242-25440261 | None:intergenic | 25.0% |
| !!! | TTTTTTCAGATTCTCTTCAT+AGG | + | chr3_4:25440436-25440455 | None:intergenic | 25.0% |
| ! | GAAAGCTAATTATAGTGATA+TGG | - | chr3_4:25440833-25440852 | Msa0495820:intron | 25.0% |
| !! | AACCTTTTCAAATTTGGATT+TGG | - | chr3_4:25441011-25441030 | Msa0495820:intron | 25.0% |
| ! | AGCGAACATAAATATCATAA+AGG | + | chr3_4:25441260-25441279 | None:intergenic | 25.0% |
| !! | GTGTCCATTTTATTCATTTT+TGG | - | chr3_4:25441588-25441607 | Msa0495820:intron | 25.0% |
| ! | AATCGAGAAATTTCTCTTAA+TGG | + | chr3_4:25441897-25441916 | None:intergenic | 25.0% |
| ! | AACTAAAGGTAAAACAAACA+AGG | + | chr3_4:25442319-25442338 | None:intergenic | 25.0% |
| !! | TGATTTTTGTAAGCAACTAA+AGG | + | chr3_4:25442333-25442352 | None:intergenic | 25.0% |
| ! | GTTGCTTACAAAAATCATTA+AGG | - | chr3_4:25442336-25442355 | Msa0495820:intron | 25.0% |
| ! | TGCTTACAAAAATCATTAAG+GGG | - | chr3_4:25442338-25442357 | Msa0495820:intron | 25.0% |
| ! | TCATGGTTGTGTAATAAAAA+TGG | + | chr3_4:25442531-25442550 | None:intergenic | 25.0% |
| ! | ATGTATAAAATTTATGCCAG+AGG | + | chr3_4:25442595-25442614 | None:intergenic | 25.0% |
| ! | AAGGCTAAATTTATTCTAGA+GGG | + | chr3_4:25442623-25442642 | None:intergenic | 25.0% |
| ! | TAAGGCTAAATTTATTCTAG+AGG | + | chr3_4:25442624-25442643 | None:intergenic | 25.0% |
| ! | CCTGTTAAACATAAAAAACT+GGG | + | chr3_4:25442737-25442756 | None:intergenic | 25.0% |
| !! | CTTTGCATATTGAGATTTTA+AGG | + | chr3_4:25443003-25443022 | None:intergenic | 25.0% |
| ! | AAATCTCAATATGCAAAGTT+TGG | - | chr3_4:25443005-25443024 | Msa0495820:intron | 25.0% |
| ! | ACACAAAAATGAGAAGAATA+CGG | + | chr3_4:25443159-25443178 | None:intergenic | 25.0% |
| !!! | GAAACTTTTAGGAAACTTAA+AGG | - | chr3_4:25443200-25443219 | Msa0495820:intron | 25.0% |
| ! | AAACACATTATATTCACCTT+GGG | - | chr3_4:25443263-25443282 | Msa0495820:intron | 25.0% |
| !! | AATTACAAGAAATTAGCTTC+AGG | + | chr3_4:25443409-25443428 | None:intergenic | 25.0% |
| !! | AAATTTGGAGCAAATAACAA+TGG | + | chr3_4:25443655-25443674 | None:intergenic | 25.0% |
| ! | TAGTATGGAAAAAAGAAGTA+GGG | + | chr3_4:25443985-25444004 | None:intergenic | 25.0% |
| ! | ATAGTATGGAAAAAAGAAGT+AGG | + | chr3_4:25443986-25444005 | None:intergenic | 25.0% |
| !!! | ACTTCTTTTTTCCATACTAT+AGG | - | chr3_4:25443986-25444005 | Msa0495820:intron | 25.0% |
| ! | ACCGCAATATTAAATATTTG+CGG | - | chr3_4:25444121-25444140 | Msa0495820:intron | 25.0% |
| ! | ACCGCAAATATTTAATATTG+CGG | + | chr3_4:25444125-25444144 | None:intergenic | 25.0% |
| !!! | CATATCATACCTTGATTTTT+TGG | + | chr3_4:25444307-25444326 | None:intergenic | 25.0% |
| ! | AAAATCAAGGTATGATATGA+AGG | - | chr3_4:25444308-25444327 | Msa0495820:intron | 25.0% |
| !!! | TATTTTTTTCGTTGAAGTTG+TGG | - | chr3_4:25444536-25444555 | Msa0495820:intron | 25.0% |
| !!! | ATTTTTTTCGTTGAAGTTGT+GGG | - | chr3_4:25444537-25444556 | Msa0495820:intron | 25.0% |
| ! | AAACACTAATCCCTATTTAT+AGG | - | chr3_4:25444646-25444665 | Msa0495820:intron | 25.0% |
| !! | GTCTATGTTTTCCTATAAAT+AGG | + | chr3_4:25444660-25444679 | None:intergenic | 25.0% |
| !! | TCTTTTCTTTTTGTATGTGA+AGG | - | chr3_4:25444887-25444906 | Msa0495820:intron | 25.0% |
| ! | TTCTGTAATACTTTGTTACT+CGG | - | chr3_4:25445118-25445137 | Msa0495820:intron | 25.0% |
| !!! | GCATTTTTGTTTTTGCATTT+TGG | - | chr3_4:25445237-25445256 | Msa0495820:intron | 25.0% |
| ! | ATGTACAATTCTCATGAATA+AGG | - | chr3_4:25445517-25445536 | Msa0495820:intron | 25.0% |
| ! | GAGTGAATTGCTAATAAATT+AGG | - | chr3_4:25445586-25445605 | Msa0495820:intron | 25.0% |
| !! | GCTTTCATCTAATAATTTTC+GGG | + | chr3_4:25445658-25445677 | None:intergenic | 25.0% |
| !! | GGCTTTCATCTAATAATTTT+CGG | + | chr3_4:25445659-25445678 | None:intergenic | 25.0% |
| ! | AAAATATGTACATATCTGAC+TGG | + | chr3_4:25445680-25445699 | None:intergenic | 25.0% |
| !! | AGTCAGATATGTACATATTT+TGG | - | chr3_4:25445679-25445698 | Msa0495820:intron | 25.0% |
| ! | TGTGTTTAGCTAATGATTTA+AGG | + | chr3_4:25446156-25446175 | None:intergenic | 25.0% |
| ! | ACTTAAAACAGCAATACTTA+TGG | + | chr3_4:25446411-25446430 | None:intergenic | 25.0% |
| !!! | TTTAAGTTGCTTGATTGTTT+AGG | - | chr3_4:25446424-25446443 | Msa0495820:five_prime_UTR | 25.0% |
| !! | GATTCAACTTTTGAATAACT+TGG | + | chr3_4:25446550-25446569 | None:intergenic | 25.0% |
| ! | TCAATATGTTAAAATTGGAC+CGG | - | chr3_4:25446585-25446604 | Msa0495820:five_prime_UTR | 25.0% |
| GGAATCAAATGTGATAAAGA+TGG | + | chr3_4:25438317-25438336 | None:intergenic | 30.0% | |
| !! | CTTTAAACCTTTTCAAGCAA+TGG | - | chr3_4:25438425-25438444 | Msa0495820:three_prime_UTR | 30.0% |
| TACACATATAGAAAAGCTAC+TGG | - | chr3_4:25438932-25438951 | Msa0495820:intron | 30.0% | |
| ACTGAAAAACATTGAATCCT+TGG | - | chr3_4:25438976-25438995 | Msa0495820:intron | 30.0% | |
| !! | TAGTGTTTAGCTTTGAACTT+TGG | - | chr3_4:25439030-25439049 | Msa0495820:intron | 30.0% |
| !! | AGTGTTTAGCTTTGAACTTT+GGG | - | chr3_4:25439031-25439050 | Msa0495820:intron | 30.0% |
| AAAAAGAAGCAATAATCCTG+TGG | - | chr3_4:25439134-25439153 | Msa0495820:intron | 30.0% | |
| TCATGTAGATTGCACAAAAT+TGG | - | chr3_4:25439183-25439202 | Msa0495820:intron | 30.0% | |
| CATGTAGATTGCACAAAATT+GGG | - | chr3_4:25439184-25439203 | Msa0495820:intron | 30.0% | |
| ACTGTCAACAATATGATGTT+AGG | + | chr3_4:25439352-25439371 | None:intergenic | 30.0% | |
| !! | ACAGTTTGATTTTGATCAGA+CGG | - | chr3_4:25439444-25439463 | Msa0495820:CDS | 30.0% |
| AACTTTACATAACCAAAACG+TGG | + | chr3_4:25439473-25439492 | None:intergenic | 30.0% | |
| TGGTGTATATTGAATTGGAT+TGG | - | chr3_4:25439626-25439645 | Msa0495820:intron | 30.0% | |
| TACAACTGACAACAATATGT+TGG | + | chr3_4:25439682-25439701 | None:intergenic | 30.0% | |
| GAATTGATAAAGGGCAATAA+AGG | - | chr3_4:25439940-25439959 | Msa0495820:intron | 30.0% | |
| GGGCAATAAAGGAAAATAAT+AGG | - | chr3_4:25439951-25439970 | Msa0495820:intron | 30.0% | |
| ATATTCCAACATGTTTGGTT+TGG | + | chr3_4:25440090-25440109 | None:intergenic | 30.0% | |
| CTACAATATTCCAACATGTT+TGG | + | chr3_4:25440095-25440114 | None:intergenic | 30.0% | |
| GTTACACATTTATGTTGTTG+TGG | - | chr3_4:25440184-25440203 | Msa0495820:intron | 30.0% | |
| TTGACTTCACATTGTAAACT+TGG | - | chr3_4:25440246-25440265 | Msa0495820:intron | 30.0% | |
| TGACTTCACATTGTAAACTT+GGG | - | chr3_4:25440247-25440266 | Msa0495820:intron | 30.0% | |
| ATGAACAACGTTACAAAACA+GGG | + | chr3_4:25440539-25440558 | None:intergenic | 30.0% | |
| TGAGGTCAATTTCAATTAGT+AGG | - | chr3_4:25440611-25440630 | Msa0495820:CDS | 30.0% | |
| GAGGTCAATTTCAATTAGTA+GGG | - | chr3_4:25440612-25440631 | Msa0495820:CDS | 30.0% | |
| AAATTTCAAAGACACTGTTC+AGG | + | chr3_4:25440656-25440675 | None:intergenic | 30.0% | |
| !!! | GTATTGATCATTTGGTTTTC+AGG | - | chr3_4:25440766-25440785 | Msa0495820:intron | 30.0% |
| ! | AGCACTAACCTTTTCAAATT+TGG | - | chr3_4:25441005-25441024 | Msa0495820:intron | 30.0% |
| CACCAAATCCAAATTTGAAA+AGG | + | chr3_4:25441016-25441035 | None:intergenic | 30.0% | |
| ATCCAATCTTCATCTAACAA+TGG | - | chr3_4:25441153-25441172 | Msa0495820:intron | 30.0% | |
| ! | TTTTCAACAACAGACAATCT+AGG | - | chr3_4:25441205-25441224 | Msa0495820:intron | 30.0% |
| !!! | ATGTTCGCTCTTTTTCAATA+TGG | - | chr3_4:25441271-25441290 | Msa0495820:intron | 30.0% |
| !!! | TGTTCGCTCTTTTTCAATAT+GGG | - | chr3_4:25441272-25441291 | Msa0495820:intron | 30.0% |
| GAAGCAATTTCCAATTGATA+TGG | - | chr3_4:25441294-25441313 | Msa0495820:intron | 30.0% | |
| AATTTCCAATTGATATGGCA+TGG | - | chr3_4:25441299-25441318 | Msa0495820:intron | 30.0% | |
| TCAATTTGATCACTTCCAAA+AGG | - | chr3_4:25441462-25441481 | Msa0495820:intron | 30.0% | |
| ! | AGATCTTATGATGTTCCTTT+TGG | + | chr3_4:25441480-25441499 | None:intergenic | 30.0% |
| ! | AATCTTTCCATTTTGCAACA+AGG | - | chr3_4:25441566-25441585 | Msa0495820:intron | 30.0% |
| !!! | TGATTTTAGGTTTTGGATGT+TGG | - | chr3_4:25441855-25441874 | Msa0495820:intron | 30.0% |
| TAAGAGAAATTTCTCGATTC+AGG | - | chr3_4:25441898-25441917 | Msa0495820:intron | 30.0% | |
| GTACTCGTTATTATTCAATC+CGG | + | chr3_4:25442389-25442408 | None:intergenic | 30.0% | |
| !!! | TTTTAAAGCTTTATAGGTGC+TGG | - | chr3_4:25442483-25442502 | Msa0495820:CDS | 30.0% |
| !!! | CCCAGTTTTTTATGTTTAAC+AGG | - | chr3_4:25442734-25442753 | Msa0495820:intron | 30.0% |
| GCCTGTTAAACATAAAAAAC+TGG | + | chr3_4:25442738-25442757 | None:intergenic | 30.0% | |
| TTTAGGAAACTTAAAGGCTA+AGG | - | chr3_4:25443206-25443225 | Msa0495820:intron | 30.0% | |
| TTAGGAAACTTAAAGGCTAA+GGG | - | chr3_4:25443207-25443226 | Msa0495820:intron | 30.0% | |
| GAAACACATTATATTCACCT+TGG | - | chr3_4:25443262-25443281 | Msa0495820:intron | 30.0% | |
| TTTCTCTCTTGATTTCTCTT+AGG | - | chr3_4:25443318-25443337 | Msa0495820:CDS | 30.0% | |
| TTGAAAAAGGGGAAGAAATT+AGG | - | chr3_4:25443365-25443384 | Msa0495820:intron | 30.0% | |
| TGAAAAAGGGGAAGAAATTA+GGG | - | chr3_4:25443366-25443385 | Msa0495820:intron | 30.0% | |
| !! | AAGAAATTAGGGTTTGCTTT+TGG | - | chr3_4:25443377-25443396 | Msa0495820:intron | 30.0% |
| TTGTAAAGACTCATTCATAG+TGG | - | chr3_4:25443441-25443460 | Msa0495820:intron | 30.0% | |
| CTGAATTGAGTAAACAATCT+TGG | - | chr3_4:25443506-25443525 | Msa0495820:intron | 30.0% | |
| ACTCTCTTATCTTTGTTCTT+TGG | - | chr3_4:25443544-25443563 | Msa0495820:intron | 30.0% | |
| !! | TTTGTTCTTTGGTTTGATTG+TGG | - | chr3_4:25443555-25443574 | Msa0495820:intron | 30.0% |
| AAACCAACAAGGTCAAAATT+TGG | + | chr3_4:25443670-25443689 | None:intergenic | 30.0% | |
| TCAAAACTATTGTCTTCGAA+TGG | + | chr3_4:25443882-25443901 | None:intergenic | 30.0% | |
| AATATTTCACATACAGCATC+TGG | + | chr3_4:25443939-25443958 | None:intergenic | 30.0% | |
| GTAGATAGAAACCTATAGTA+TGG | + | chr3_4:25444000-25444019 | None:intergenic | 30.0% | |
| CCAAAATAACTGACAATACA+TGG | + | chr3_4:25444031-25444050 | None:intergenic | 30.0% | |
| ! | CCATGTATTGTCAGTTATTT+TGG | - | chr3_4:25444028-25444047 | Msa0495820:CDS | 30.0% |
| ! | ATTTATAGAGTGTTAAAGCC+TGG | - | chr3_4:25444218-25444237 | Msa0495820:intron | 30.0% |
| ATTCATAAGCAGCAAAACAT+TGG | + | chr3_4:25444244-25444263 | None:intergenic | 30.0% | |
| !! | AATGTTTTGCTGCTTATGAA+TGG | - | chr3_4:25444243-25444262 | Msa0495820:intron | 30.0% |
| !!! | TTTTGGTGTTCTTGGTTATT+GGG | + | chr3_4:25444290-25444309 | None:intergenic | 30.0% |
| !!! | TTTTTGGTGTTCTTGGTTAT+TGG | + | chr3_4:25444291-25444310 | None:intergenic | 30.0% |
| ! | TATGATATGAAGGTATAGCA+AGG | - | chr3_4:25444318-25444337 | Msa0495820:intron | 30.0% |
| !!! | AAGGTATAGCAAGGATTTTT+TGG | - | chr3_4:25444327-25444346 | Msa0495820:intron | 30.0% |
| TGATCCTAAGAGATAATCTA+AGG | - | chr3_4:25444730-25444749 | Msa0495820:intron | 30.0% | |
| TGTACCTTAGATTATCTCTT+AGG | + | chr3_4:25444737-25444756 | None:intergenic | 30.0% | |
| ATTTAAGAGATCAGCCTAAT+TGG | - | chr3_4:25444851-25444870 | Msa0495820:intron | 30.0% | |
| ! | TTTTGTATGTGAAGGTCATA+TGG | - | chr3_4:25444895-25444914 | Msa0495820:intron | 30.0% |
| TTTGTATGTGAAGGTCATAT+GGG | - | chr3_4:25444896-25444915 | Msa0495820:intron | 30.0% | |
| !! | ATACCATATTTCTGGTGAAA+AGG | + | chr3_4:25445019-25445038 | None:intergenic | 30.0% |
| TTTCACATAGATCTCACTAT+GGG | + | chr3_4:25445166-25445185 | None:intergenic | 30.0% | |
| ATTTCACATAGATCTCACTA+TGG | + | chr3_4:25445167-25445186 | None:intergenic | 30.0% | |
| CAAACGATAATCAAATGTGT+TGG | - | chr3_4:25445188-25445207 | Msa0495820:intron | 30.0% | |
| GAATTTACATTTGTAGGTGA+AGG | - | chr3_4:25445333-25445352 | Msa0495820:intron | 30.0% | |
| ACTATATCCATGAGACAAAT+GGG | + | chr3_4:25445465-25445484 | None:intergenic | 30.0% | |
| AACTATATCCATGAGACAAA+TGG | + | chr3_4:25445466-25445485 | None:intergenic | 30.0% | |
| !!! | AAGGCGATTTTTTAACTGTT+AGG | - | chr3_4:25445536-25445555 | Msa0495820:intron | 30.0% |
| ATTTATTAGCAATTCACTCG+AGG | + | chr3_4:25445585-25445604 | None:intergenic | 30.0% | |
| CTAATAAATTAGGCTATGTG+TGG | - | chr3_4:25445596-25445615 | Msa0495820:intron | 30.0% | |
| AAAAATAAGGCAATCCAAAC+GGG | + | chr3_4:25445851-25445870 | None:intergenic | 30.0% | |
| CAAAAATAAGGCAATCCAAA+CGG | + | chr3_4:25445852-25445871 | None:intergenic | 30.0% | |
| ACTGAATAAGTGGAACAAAT+AGG | - | chr3_4:25446321-25446340 | Msa0495820:intron | 30.0% | |
| TTATGAGTTACTGTGATTCT+AGG | - | chr3_4:25446353-25446372 | Msa0495820:CDS | 30.0% | |
| TAAAACAGCAATACTTATGG+TGG | + | chr3_4:25446408-25446427 | None:intergenic | 30.0% | |
| ! | CAAGTAACAAGTGAAGTTTT+TGG | + | chr3_4:25446453-25446472 | None:intergenic | 30.0% |
| ! | CCAGCTTTTACAGTTAAAAA+AGG | + | chr3_4:25446527-25446546 | None:intergenic | 30.0% |
| !!! | CCTTTTTTAACTGTAAAAGC+TGG | - | chr3_4:25446524-25446543 | Msa0495820:intron | 30.0% |
| GAATTTATCAATTTAACGGC+CGG | + | chr3_4:25446607-25446626 | None:intergenic | 30.0% | |
| AAGGAAAGAGGACAAAGATA+TGG | + | chr3_4:25438210-25438229 | None:intergenic | 35.0% | |
| AAGTGAAATGGGAGAGAAAA+TGG | + | chr3_4:25438338-25438357 | None:intergenic | 35.0% | |
| GTGTAATTTAGATCGAAACG+AGG | - | chr3_4:25438386-25438405 | Msa0495820:three_prime_UTR | 35.0% | |
| !! | ACCTTTTCAAGCAATGGATT+TGG | - | chr3_4:25438431-25438450 | Msa0495820:three_prime_UTR | 35.0% |
| TCAAGAATCTCTATGATGCT+GGG | - | chr3_4:25438844-25438863 | Msa0495820:intron | 35.0% | |
| !! | GTGTTTAGCTTTGAACTTTG+GGG | - | chr3_4:25439032-25439051 | Msa0495820:intron | 35.0% |
| !!! | TCTTTTTTATCCAACACCAC+AGG | + | chr3_4:25439153-25439172 | None:intergenic | 35.0% |
| TTGAACAGAATGTGTCATGT+AGG | - | chr3_4:25439255-25439274 | Msa0495820:intron | 35.0% | |
| CAACAATATGATGTTAGGTG+AGG | + | chr3_4:25439347-25439366 | None:intergenic | 35.0% | |
| !! | CAGTTTGATTTTGATCAGAC+GGG | - | chr3_4:25439445-25439464 | Msa0495820:CDS | 35.0% |
| !! | AGTTTGATTTTGATCAGACG+GGG | - | chr3_4:25439446-25439465 | Msa0495820:CDS | 35.0% |
| TCAGATGAAGATAGTCAGAT+CGG | - | chr3_4:25439535-25439554 | Msa0495820:intron | 35.0% | |
| ! | CAACAATATGTTGGTAGGTA+AGG | + | chr3_4:25439673-25439692 | None:intergenic | 35.0% |
| ACTGACAACAATATGTTGGT+AGG | + | chr3_4:25439678-25439697 | None:intergenic | 35.0% | |
| ! | TTCTAGAAAAGCTAGAAGCT+AGG | - | chr3_4:25440011-25440030 | Msa0495820:intron | 35.0% |
| AAAAGCCAAACCAAACATGT+TGG | - | chr3_4:25440082-25440101 | Msa0495820:intron | 35.0% | |
| CATTTATGTTGTTGTGGATC+TGG | - | chr3_4:25440190-25440209 | Msa0495820:intron | 35.0% | |
| ATCGTTCGATCTTGATCATA+TGG | - | chr3_4:25440213-25440232 | Msa0495820:intron | 35.0% | |
| TCGTTCGATCTTGATCATAT+GGG | - | chr3_4:25440214-25440233 | Msa0495820:intron | 35.0% | |
| TGAACAACGTTACAAAACAG+GGG | + | chr3_4:25440538-25440557 | None:intergenic | 35.0% | |
| CATGAACAACGTTACAAAAC+AGG | + | chr3_4:25440540-25440559 | None:intergenic | 35.0% | |
| TGTATGACTGTAAATGTGTG+AGG | - | chr3_4:25440593-25440612 | Msa0495820:CDS | 35.0% | |
| ! | ACACTGTTCAGGTTAACTTA+AGG | + | chr3_4:25440645-25440664 | None:intergenic | 35.0% |
| AGTCAACAAAACTCTGTTGT+TGG | - | chr3_4:25441062-25441081 | Msa0495820:intron | 35.0% | |
| CTCCATTGTTAGATGAAGAT+TGG | + | chr3_4:25441158-25441177 | None:intergenic | 35.0% | |
| CAATCTTCATCTAACAATGG+AGG | - | chr3_4:25441156-25441175 | Msa0495820:intron | 35.0% | |
| TGTTTCCATGCCATATCAAT+TGG | + | chr3_4:25441307-25441326 | None:intergenic | 35.0% | |
| ATGGCATGGAAACAATATCA+TGG | - | chr3_4:25441313-25441332 | Msa0495820:intron | 35.0% | |
| ! | AAGCTTTTATGAGTTTGGCT+GGG | - | chr3_4:25441540-25441559 | Msa0495820:intron | 35.0% |
| TAAGACCAAGTTGTAAAGCA+AGG | + | chr3_4:25441723-25441742 | None:intergenic | 35.0% | |
| AAAGATGAAAACCTTCTGTC+CGG | + | chr3_4:25441749-25441768 | None:intergenic | 35.0% | |
| ATCGACGAGAATTCATAAGA+TGG | + | chr3_4:25441936-25441955 | None:intergenic | 35.0% | |
| TTGTAGCATCACTATTGGAT+TGG | + | chr3_4:25441969-25441988 | None:intergenic | 35.0% | |
| TAGCATTGTAGCATCACTAT+TGG | + | chr3_4:25441974-25441993 | None:intergenic | 35.0% | |
| TGCAGTATTATTGTCAATCG+CGG | + | chr3_4:25442126-25442145 | None:intergenic | 35.0% | |
| TCTTGTTAGGACAACAAAAC+TGG | + | chr3_4:25442169-25442188 | None:intergenic | 35.0% | |
| TCGCACTTGATTTATCAAGT+CGG | - | chr3_4:25442218-25442237 | Msa0495820:intron | 35.0% | |
| CAAAAGATGAGGAAACATAG+AGG | + | chr3_4:25442291-25442310 | None:intergenic | 35.0% | |
| AACCATGATGCATTGTGTTT+AGG | - | chr3_4:25442543-25442562 | Msa0495820:intron | 35.0% | |
| GTACTTATATGACAATCCTC+TGG | - | chr3_4:25442576-25442595 | Msa0495820:intron | 35.0% | |
| GGTGTAACATTTATAACTGG+AGG | + | chr3_4:25442900-25442919 | None:intergenic | 35.0% | |
| CCAGGTGTAACATTTATAAC+TGG | + | chr3_4:25442903-25442922 | None:intergenic | 35.0% | |
| CCAGTTATAAATGTTACACC+TGG | - | chr3_4:25442900-25442919 | Msa0495820:intron | 35.0% | |
| ATATGCAAAGTTTGGAAGTC+TGG | - | chr3_4:25443013-25443032 | Msa0495820:intron | 35.0% | |
| !! | AGTTTGGAAGTCTGGAATTT+TGG | - | chr3_4:25443021-25443040 | Msa0495820:intron | 35.0% |
| AGAAGAATACGGCTGAAATA+TGG | + | chr3_4:25443148-25443167 | None:intergenic | 35.0% | |
| !! | TACTTTTGGGTGAGATTCTT+GGG | - | chr3_4:25443235-25443254 | Msa0495820:intron | 35.0% |
| TGTTGAGAGAGACTTGAAAA+AGG | - | chr3_4:25443352-25443371 | Msa0495820:intron | 35.0% | |
| GTTGAGAGAGACTTGAAAAA+GGG | - | chr3_4:25443353-25443372 | Msa0495820:intron | 35.0% | |
| TTGAGAGAGACTTGAAAAAG+GGG | - | chr3_4:25443354-25443373 | Msa0495820:intron | 35.0% | |
| GAACAAAGATAAGAGAGTAG+AGG | + | chr3_4:25443542-25443561 | None:intergenic | 35.0% | |
| ! | TGTGGTTTTTCTATACACAG+AGG | - | chr3_4:25443573-25443592 | Msa0495820:intron | 35.0% |
| ! | CTAGGTTGAATATTGTTGCT+TGG | - | chr3_4:25443610-25443629 | Msa0495820:intron | 35.0% |
| !!! | ACCTTGTTGGTTTTGACAAA+GGG | - | chr3_4:25443677-25443696 | Msa0495820:intron | 35.0% |
| AAGTCTCTACAGCCTTAATT+AGG | - | chr3_4:25444086-25444105 | Msa0495820:intron | 35.0% | |
| CAGTGTCAGATTCTAAATAG+TGG | + | chr3_4:25444158-25444177 | None:intergenic | 35.0% | |
| !!! | CCTTGATTTTTTGGTGTTCT+TGG | + | chr3_4:25444298-25444317 | None:intergenic | 35.0% |
| CCAAGAACACCAAAAAATCA+AGG | - | chr3_4:25444295-25444314 | Msa0495820:intron | 35.0% | |
| ! | CAGAAATTGAGATTGGTGAT+GGG | - | chr3_4:25444403-25444422 | Msa0495820:intron | 35.0% |
| TTTGTGGTCAATCTAATGTC+AGG | + | chr3_4:25444432-25444451 | None:intergenic | 35.0% | |
| AAGACTGTAAACTTACCCTA+GGG | - | chr3_4:25444759-25444778 | Msa0495820:intron | 35.0% | |
| ATATCTTGGTTTATCCCCTA+GGG | + | chr3_4:25444777-25444796 | None:intergenic | 35.0% | |
| AATATCTTGGTTTATCCCCT+AGG | + | chr3_4:25444778-25444797 | None:intergenic | 35.0% | |
| ATCAGCCTAATTGGCTAAAT+GGG | - | chr3_4:25444860-25444879 | Msa0495820:intron | 35.0% | |
| AAACTCCCATTTAGCCAATT+AGG | + | chr3_4:25444868-25444887 | None:intergenic | 35.0% | |
| CAGAAGCAATACCATATTTC+TGG | + | chr3_4:25445027-25445046 | None:intergenic | 35.0% | |
| TGCACATAGCTGAGAATATT+CGG | - | chr3_4:25445264-25445283 | Msa0495820:intron | 35.0% | |
| ! | TTTTCGTGCTCAAAACTCAA+TGG | - | chr3_4:25445296-25445315 | Msa0495820:intron | 35.0% |
| AAGTTGTGTTAGAGAAAACG+CGG | + | chr3_4:25446223-25446242 | None:intergenic | 35.0% | |
| ! | CTTGCTTCTGTTATCTTTTC+AGG | - | chr3_4:25446240-25446259 | Msa0495820:intron | 35.0% |
| ! | CACACCAATGTACTTCTTTT+TGG | - | chr3_4:25446274-25446293 | Msa0495820:intron | 35.0% |
| !! | CAATGTACTTCTTTTTGGCA+CGG | - | chr3_4:25446279-25446298 | Msa0495820:intron | 35.0% |
| TCAGAAAGCAACTGAATAAG+TGG | - | chr3_4:25446311-25446330 | Msa0495820:intron | 35.0% | |
| ATAAAGATGGTGAACTCACG+TGG | + | chr3_4:25438304-25438323 | None:intergenic | 40.0% | |
| GCCAAATCCATTGCTTGAAA+AGG | + | chr3_4:25438435-25438454 | None:intergenic | 40.0% | |
| ! | ATGGATTTGGCTTCGAATCT+CGG | - | chr3_4:25438444-25438463 | Msa0495820:three_prime_UTR | 40.0% |
| CTCAAGAATCTCTATGATGC+TGG | - | chr3_4:25438843-25438862 | Msa0495820:intron | 40.0% | |
| GAATCCTTGGATCTAGTCTA+AGG | - | chr3_4:25438989-25439008 | Msa0495820:intron | 40.0% | |
| TCTTCCTTAGACTAGATCCA+AGG | + | chr3_4:25438996-25439015 | None:intergenic | 40.0% | |
| AAGCAATAATCCTGTGGTGT+TGG | - | chr3_4:25439140-25439159 | Msa0495820:intron | 40.0% | |
| AAATCAGAATCATTCCACGC+AGG | + | chr3_4:25439237-25439256 | None:intergenic | 40.0% | |
| ATTATTCAAAACCACCGAGC+TGG | - | chr3_4:25439292-25439311 | Msa0495820:intron | 40.0% | |
| AATCCAAAACTGTACCAGCT+CGG | + | chr3_4:25439309-25439328 | None:intergenic | 40.0% | |
| ! | GTTACACAGTTGCTTTGTTG+CGG | - | chr3_4:25439415-25439434 | Msa0495820:CDS | 40.0% |
| TCCTAGACATTGTGTGTGTT+TGG | - | chr3_4:25439709-25439728 | Msa0495820:intron | 40.0% | |
| ACCAAACACACACAATGTCT+AGG | + | chr3_4:25439713-25439732 | None:intergenic | 40.0% | |
| AGCTAGGATTTGTAGCTTCA+TGG | - | chr3_4:25440027-25440046 | Msa0495820:intron | 40.0% | |
| ! | GCTTCATGGAGAATTGCTTT+TGG | - | chr3_4:25440041-25440060 | Msa0495820:intron | 40.0% |
| !! | TCATGGAGAATTGCTTTTGG+AGG | - | chr3_4:25440044-25440063 | Msa0495820:intron | 40.0% |
| CGTTCGATCTTGATCATATG+GGG | - | chr3_4:25440215-25440234 | Msa0495820:intron | 40.0% | |
| TTGTAAACTTGGGCCCTATT+TGG | - | chr3_4:25440257-25440276 | Msa0495820:intron | 40.0% | |
| ! | AGTCTCTGAAGACTCATGTT+AGG | - | chr3_4:25440481-25440500 | Msa0495820:intron | 40.0% |
| !! | GAGAAGTATCATGCATCCTA+TGG | - | chr3_4:25440792-25440811 | Msa0495820:intron | 40.0% |
| AAGTATCATGCATCCTATGG+AGG | - | chr3_4:25440795-25440814 | Msa0495820:intron | 40.0% | |
| ! | GCGACAAGCTTTTATGAGTT+TGG | - | chr3_4:25441535-25441554 | Msa0495820:intron | 40.0% |
| ! | CAAGCTTTTATGAGTTTGGC+TGG | - | chr3_4:25441539-25441558 | Msa0495820:intron | 40.0% |
| ! | AGCTTTTATGAGTTTGGCTG+GGG | - | chr3_4:25441541-25441560 | Msa0495820:intron | 40.0% |
| ATGGACACCTTGTTGCAAAA+TGG | + | chr3_4:25441576-25441595 | None:intergenic | 40.0% | |
| CACTTCCTTGCTTTACAACT+TGG | - | chr3_4:25441715-25441734 | Msa0495820:intron | 40.0% | |
| !! | TTACAACTTGGTCTTAAGCC+CGG | - | chr3_4:25441727-25441746 | Msa0495820:intron | 40.0% |
| AAGATGAAAACCTTCTGTCC+GGG | + | chr3_4:25441748-25441767 | None:intergenic | 40.0% | |
| !!! | TAGGTTTTGGATGTTGGTTG+TGG | - | chr3_4:25441861-25441880 | Msa0495820:intron | 40.0% |
| ! | TTGGATGTTGGTTGTGGTAT+TGG | - | chr3_4:25441867-25441886 | Msa0495820:intron | 40.0% |
| ! | TGGATGTTGGTTGTGGTATT+GGG | - | chr3_4:25441868-25441887 | Msa0495820:intron | 40.0% |
| ! | ACTATTGGATTGGACAGCAT+TGG | + | chr3_4:25441959-25441978 | None:intergenic | 40.0% |
| GCTACAATGCTATAGCATAG+TGG | - | chr3_4:25441982-25442001 | Msa0495820:intron | 40.0% | |
| GCAAGTCATCTGATCTTGTT+AGG | + | chr3_4:25442182-25442201 | None:intergenic | 40.0% | |
| AGATGAGGAAACATAGAGGA+TGG | + | chr3_4:25442287-25442306 | None:intergenic | 40.0% | |
| ACAAGGAAGAGCAAAAGATG+AGG | + | chr3_4:25442302-25442321 | None:intergenic | 40.0% | |
| TGCCTAAACACAATGCATCA+TGG | + | chr3_4:25442548-25442567 | None:intergenic | 40.0% | |
| ! | GGGTTGAAAAATGGGGTTTT+AGG | - | chr3_4:25443069-25443088 | Msa0495820:intron | 40.0% |
| ! | GCTAAGGGTTGAGTACTTTT+GGG | - | chr3_4:25443222-25443241 | Msa0495820:intron | 40.0% |
| !! | GTACTTTTGGGTGAGATTCT+TGG | - | chr3_4:25443234-25443253 | Msa0495820:intron | 40.0% |
| TAATGAGATCTCACTACCCA+AGG | + | chr3_4:25443282-25443301 | None:intergenic | 40.0% | |
| AGTGAGATCTCATTAGAGGA+AGG | - | chr3_4:25443287-25443306 | Msa0495820:CDS | 40.0% | |
| !! | AAGACTCATTCATAGTGGAC+CGG | - | chr3_4:25443446-25443465 | Msa0495820:intron | 40.0% |
| ! | GAGGTTGCTAGATTTGTTCT+AGG | - | chr3_4:25443592-25443611 | Msa0495820:intron | 40.0% |
| !! | GCTCCAAATTTTGACCTTGT+TGG | - | chr3_4:25443664-25443683 | Msa0495820:intron | 40.0% |
| !!! | GACCTTGTTGGTTTTGACAA+AGG | - | chr3_4:25443676-25443695 | Msa0495820:intron | 40.0% |
| ACCCTTTGTCAAAACCAACA+AGG | + | chr3_4:25443681-25443700 | None:intergenic | 40.0% | |
| ! | AATGCTGAAGAGAGAGCTTT+TGG | - | chr3_4:25443726-25443745 | Msa0495820:intron | 40.0% |
| TTGGATCAAGACTGTGATTC+TGG | - | chr3_4:25444047-25444066 | Msa0495820:CDS | 40.0% | |
| CTGTAGAGACTTCAAAAACC+TGG | + | chr3_4:25444078-25444097 | None:intergenic | 40.0% | |
| CAAGTGTGAAGGCCTAATTA+AGG | + | chr3_4:25444101-25444120 | None:intergenic | 40.0% | |
| AATATTGCGGTCAAGTGTGA+AGG | + | chr3_4:25444112-25444131 | None:intergenic | 40.0% | |
| AAGACAAAATTCCTTGCTGC+AGG | - | chr3_4:25444380-25444399 | Msa0495820:intron | 40.0% | |
| GCAGAAATTGAGATTGGTGA+TGG | - | chr3_4:25444402-25444421 | Msa0495820:intron | 40.0% | |
| TAGAGCTTCAAGACACTTTG+TGG | + | chr3_4:25444448-25444467 | None:intergenic | 40.0% | |
| !! | TCTAAAGCAAGCAGGTTTTG+AGG | - | chr3_4:25444464-25444483 | Msa0495820:intron | 40.0% |
| CTAGGGTAAGTTTACAGTCT+TGG | + | chr3_4:25444760-25444779 | None:intergenic | 40.0% | |
| CAAGACTGTAAACTTACCCT+AGG | - | chr3_4:25444758-25444777 | Msa0495820:intron | 40.0% | |
| AGACTGTAAACTTACCCTAG+GGG | - | chr3_4:25444760-25444779 | Msa0495820:intron | 40.0% | |
| GATCAGCCTAATTGGCTAAA+TGG | - | chr3_4:25444859-25444878 | Msa0495820:intron | 40.0% | |
| ! | ACGCCTTTTCACCAGAAATA+TGG | - | chr3_4:25445013-25445032 | Msa0495820:intron | 40.0% |
| ! | GTTACTCGGTGAAATGAATG+TGG | - | chr3_4:25445132-25445151 | Msa0495820:intron | 40.0% |
| GGTTCAAGATTTCCTTGAGA+AGG | - | chr3_4:25445396-25445415 | Msa0495820:intron | 40.0% | |
| CTCAATTCCCATTTGTCTCA+TGG | - | chr3_4:25445455-25445474 | Msa0495820:intron | 40.0% | |
| AACTGTTAGGTCTCTACTCT+TGG | - | chr3_4:25445549-25445568 | Msa0495820:intron | 40.0% | |
| TACTTCGACATGTCAACCAA+GGG | + | chr3_4:25446052-25446071 | None:intergenic | 40.0% | |
| TTACTTCGACATGTCAACCA+AGG | + | chr3_4:25446053-25446072 | None:intergenic | 40.0% | |
| ! | CGTGCCAAAAAGAAGTACAT+TGG | + | chr3_4:25446281-25446300 | None:intergenic | 40.0% |
| !! | ATTCAGTTGCTTTCTGAAGC+AGG | + | chr3_4:25446308-25446327 | None:intergenic | 40.0% |
| ACTACACTATCCACTAATGC+AGG | + | chr3_4:25446496-25446515 | None:intergenic | 40.0% | |
| AGAGAGAGAGAGAGGTTTAG+AGG | + | chr3_4:25438251-25438270 | None:intergenic | 45.0% | |
| GAAGATAGTCAGATCGGTAG+AGG | - | chr3_4:25439541-25439560 | Msa0495820:intron | 45.0% | |
| TTACAAAACAGGGGTCTGCT+TGG | + | chr3_4:25440529-25440548 | None:intergenic | 45.0% | |
| TTCATCCTCTTGACCTCCAT+AGG | + | chr3_4:25440811-25440830 | None:intergenic | 45.0% | |
| ATGGAGGTCAAGAGGATGAA+AGG | - | chr3_4:25440811-25440830 | Msa0495820:intron | 45.0% | |
| ! | GCTTTTATGAGTTTGGCTGG+GGG | - | chr3_4:25441542-25441561 | Msa0495820:intron | 45.0% |
| ! | CTTTTATGAGTTTGGCTGGG+GGG | - | chr3_4:25441543-25441562 | Msa0495820:intron | 45.0% |
| ! | TACTTTTCTTCCGCTGCAGA+TGG | - | chr3_4:25441653-25441672 | Msa0495820:intron | 45.0% |
| ! | ACTTTTCTTCCGCTGCAGAT+GGG | - | chr3_4:25441654-25441673 | Msa0495820:intron | 45.0% |
| ! | GGATGTTGGTTGTGGTATTG+GGG | - | chr3_4:25441869-25441888 | Msa0495820:intron | 45.0% |
| ! | GATGTTGGTTGTGGTATTGG+GGG | - | chr3_4:25441870-25441889 | Msa0495820:intron | 45.0% |
| GGACAACAAAACTGGCAACT+AGG | + | chr3_4:25442161-25442180 | None:intergenic | 45.0% | |
| GATTCTGACTGCAGGGAATT+TGG | - | chr3_4:25442259-25442278 | Msa0495820:intron | 45.0% | |
| ATAACGAGTACCAGATCACC+AGG | - | chr3_4:25442398-25442417 | Msa0495820:intron | 45.0% | |
| TAACGAGTACCAGATCACCA+GGG | - | chr3_4:25442399-25442418 | Msa0495820:intron | 45.0% | |
| CAAAACACATACCTTTCCCC+TGG | + | chr3_4:25442419-25442438 | None:intergenic | 45.0% | |
| ACTCAATCGCAAAACTGGAG+TGG | - | chr3_4:25442758-25442777 | Msa0495820:intron | 45.0% | |
| CAAGACTTGCAACTTCGTCA+AGG | - | chr3_4:25442782-25442801 | Msa0495820:intron | 45.0% | |
| ACTTGCAACTTCGTCAAGGT+CGG | - | chr3_4:25442786-25442805 | Msa0495820:intron | 45.0% | |
| ! | GGCTAAGGGTTGAGTACTTT+TGG | - | chr3_4:25443221-25443240 | Msa0495820:intron | 45.0% |
| TTTGGGTGAGATTCTTGGGT+TGG | - | chr3_4:25443239-25443258 | Msa0495820:intron | 45.0% | |
| TTGGGTGAGATTCTTGGGTT+GGG | - | chr3_4:25443240-25443259 | Msa0495820:intron | 45.0% | |
| GGGTAGTGAGATCTCATTAG+AGG | - | chr3_4:25443283-25443302 | Msa0495820:CDS | 45.0% | |
| CCAAATTGACCTACGTCTAG+GGG | + | chr3_4:25443485-25443504 | None:intergenic | 45.0% | |
| CCCAAATTGACCTACGTCTA+GGG | + | chr3_4:25443486-25443505 | None:intergenic | 45.0% | |
| CCCTAGACGTAGGTCAATTT+GGG | - | chr3_4:25443483-25443502 | Msa0495820:intron | 45.0% | |
| TGCTTGGACTGTTCTGTTGT+TGG | - | chr3_4:25443626-25443645 | Msa0495820:intron | 45.0% | |
| ATCAAGACTGTGATTCTGGC+TGG | - | chr3_4:25444051-25444070 | Msa0495820:CDS | 45.0% | |
| TAAGCAGCAAAACATTGGCC+AGG | + | chr3_4:25444239-25444258 | None:intergenic | 45.0% | |
| CTGCAGGCAGAAATTGAGAT+TGG | - | chr3_4:25444396-25444415 | Msa0495820:intron | 45.0% | |
| !! | CTTGAAGCTCTAAAGCAAGC+AGG | - | chr3_4:25444456-25444475 | Msa0495820:intron | 45.0% |
| AAAGGCAAGTACCAAGGAAG+AGG | + | chr3_4:25444945-25444964 | None:intergenic | 45.0% | |
| TCTTCCTTGGTACTTGCCTT+TGG | - | chr3_4:25444944-25444963 | Msa0495820:intron | 45.0% | |
| TTGTCCAAAGGCAAGTACCA+AGG | + | chr3_4:25444951-25444970 | None:intergenic | 45.0% | |
| GAGAAGTGACTCTTGTCCAA+AGG | + | chr3_4:25444963-25444982 | None:intergenic | 45.0% | |
| ACTTAGCAGCTTCCGTCTAA+CGG | - | chr3_4:25444983-25445002 | Msa0495820:intron | 45.0% | |
| ACATTTGTAGGTGAAGGCTC+TGG | - | chr3_4:25445339-25445358 | Msa0495820:intron | 45.0% | |
| ! | TTTGTTGGACTTGCTCCCAA+GGG | - | chr3_4:25445364-25445383 | Msa0495820:intron | 45.0% |
| TACAAGAGTTAAGGCCCGTT+TGG | - | chr3_4:25445834-25445853 | Msa0495820:intron | 45.0% | |
| CAATGTGCTTCCTGCATTAG+TGG | - | chr3_4:25446483-25446502 | Msa0495820:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr3_4:25438257-25438276 | None:intergenic | 50.0% | |
| ! | GATTTGGCTTCGAATCTCGG+TGG | - | chr3_4:25438447-25438466 | Msa0495820:three_prime_UTR | 50.0% |
| GAGAGTGACGCACTTATCGA+CGG | + | chr3_4:25438502-25438521 | None:intergenic | 50.0% | |
| CCACGCAGGATGATAAAGAC+TGG | + | chr3_4:25439223-25439242 | None:intergenic | 50.0% | |
| CCAGTCTTTATCATCCTGCG+TGG | - | chr3_4:25439220-25439239 | Msa0495820:intron | 50.0% | |
| ! | AGTCAGATCGGTAGAGGCAT+AGG | - | chr3_4:25439547-25439566 | Msa0495820:intron | 50.0% |
| AAACAGGGGTCTGCTTGGAT+TGG | + | chr3_4:25440524-25440543 | None:intergenic | 50.0% | |
| TGCATCCTATGGAGGTCAAG+AGG | - | chr3_4:25440803-25440822 | Msa0495820:intron | 50.0% | |
| ACAGCGTGATTCTGACTGCA+GGG | - | chr3_4:25442252-25442271 | Msa0495820:intron | 50.0% | |
| TGCAGCTCGACATCTGTTAC+CGG | - | chr3_4:25442367-25442386 | Msa0495820:intron | 50.0% | |
| AACGAGTACCAGATCACCAG+GGG | - | chr3_4:25442400-25442419 | Msa0495820:intron | 50.0% | |
| ATACCTTTCCCCTGGTGATC+TGG | + | chr3_4:25442411-25442430 | None:intergenic | 50.0% | |
| CAGGCACTCAATCGCAAAAC+TGG | - | chr3_4:25442753-25442772 | Msa0495820:intron | 50.0% | |
| !! | TGGGAGGCGGGTTGAAAAAT+GGG | - | chr3_4:25443061-25443080 | Msa0495820:intron | 50.0% |
| CCCCTAGACGTAGGTCAATT+TGG | - | chr3_4:25443482-25443501 | Msa0495820:intron | 50.0% | |
| GCCCAAATTGACCTACGTCT+AGG | + | chr3_4:25443487-25443506 | None:intergenic | 50.0% | |
| CACATACAGCATCTGGTGCA+TGG | + | chr3_4:25443932-25443951 | None:intergenic | 50.0% | |
| CTCAATTTCTGCCTGCAGCA+AGG | + | chr3_4:25444394-25444413 | None:intergenic | 50.0% | |
| CATCAGACTCTCCTCTTCCT+TGG | - | chr3_4:25444931-25444950 | Msa0495820:intron | 50.0% | |
| !! | GTGAAGGCTCTGGAGTTTGT+TGG | - | chr3_4:25445349-25445368 | Msa0495820:intron | 50.0% |
| ! | GTTTGTTGGACTTGCTCCCA+AGG | - | chr3_4:25445363-25445382 | Msa0495820:intron | 50.0% |
| ! | TTGTTGGACTTGCTCCCAAG+GGG | - | chr3_4:25445365-25445384 | Msa0495820:intron | 50.0% |
| TGAACCCTTTGACTCCCCTT+GGG | + | chr3_4:25445382-25445401 | None:intergenic | 50.0% | |
| TTGAACCCTTTGACTCCCCT+TGG | + | chr3_4:25445383-25445402 | None:intergenic | 50.0% | |
| TTTCCTTGAGAAGGCTGCAG+AGG | - | chr3_4:25445405-25445424 | Msa0495820:intron | 50.0% | |
| TTCCTTGAGAAGGCTGCAGA+GGG | - | chr3_4:25445406-25445425 | Msa0495820:intron | 50.0% | |
| AGTCAATCCAAACGGACCCT+TGG | - | chr3_4:25446033-25446052 | Msa0495820:intron | 50.0% | |
| ATGTCAACCAAGGGTCCGTT+TGG | + | chr3_4:25446043-25446062 | None:intergenic | 50.0% | |
| AGTGACGCACTTATCGACGG+CGG | + | chr3_4:25438499-25438518 | None:intergenic | 55.0% | |
| CCAAAACTGTACCAGCTCGG+TGG | + | chr3_4:25439306-25439325 | None:intergenic | 55.0% | |
| ! | CCACCGAGCTGGTACAGTTT+TGG | - | chr3_4:25439303-25439322 | Msa0495820:intron | 55.0% |
| ! | ATCAGACGGGGTCCACGTTT+TGG | - | chr3_4:25439458-25439477 | Msa0495820:CDS | 55.0% |
| ! | TGTTGACTGATGCAGCAGCG+TGG | + | chr3_4:25441050-25441069 | None:intergenic | 55.0% |
| TTCTTCCGCTGCAGATGGGT+AGG | - | chr3_4:25441658-25441677 | Msa0495820:intron | 55.0% | |
| TCTTCCGCTGCAGATGGGTA+GGG | - | chr3_4:25441659-25441678 | Msa0495820:intron | 55.0% | |
| ATTCCCCTACCCATCTGCAG+CGG | + | chr3_4:25441666-25441685 | None:intergenic | 55.0% | |
| ! | TGGTCTTAAGCCCGGACAGA+AGG | - | chr3_4:25441735-25441754 | Msa0495820:intron | 55.0% |
| GACAGCGTGATTCTGACTGC+AGG | - | chr3_4:25442251-25442270 | Msa0495820:intron | 55.0% | |
| GTACCAGATCACCAGGGGAA+AGG | - | chr3_4:25442405-25442424 | Msa0495820:intron | 55.0% | |
| TGGTATGCCTCTGTCCCATC+TGG | - | chr3_4:25443041-25443060 | Msa0495820:intron | 55.0% | |
| GGTATGCCTCTGTCCCATCT+GGG | - | chr3_4:25443042-25443061 | Msa0495820:intron | 55.0% | |
| TTTCAACCCGCCTCCCAGAT+GGG | + | chr3_4:25443058-25443077 | None:intergenic | 55.0% | |
| ! | TTTTCAACCCGCCTCCCAGA+TGG | + | chr3_4:25443059-25443078 | None:intergenic | 55.0% |
| !! | CTGGGAGGCGGGTTGAAAAA+TGG | - | chr3_4:25443060-25443079 | Msa0495820:intron | 55.0% |
| !! | GGGAGGCGGGTTGAAAAATG+GGG | - | chr3_4:25443062-25443081 | Msa0495820:intron | 55.0% |
| TTGACACTGCGTCATCTGCG+AGG | - | chr3_4:25443096-25443115 | Msa0495820:intron | 55.0% | |
| TACAGCATCTGGTGCATGGC+AGG | + | chr3_4:25443928-25443947 | None:intergenic | 55.0% | |
| ! | ACTGTGATTCTGGCTGGTCC+AGG | - | chr3_4:25444057-25444076 | Msa0495820:intron | 55.0% |
| AGCTTCCGTCTAACGGCTGT+TGG | - | chr3_4:25444990-25445009 | Msa0495820:intron | 55.0% | |
| TTGCTCCCAAGGGGAGTCAA+AGG | - | chr3_4:25445374-25445393 | Msa0495820:intron | 55.0% | |
| TGCTCCCAAGGGGAGTCAAA+GGG | - | chr3_4:25445375-25445394 | Msa0495820:intron | 55.0% | |
| GCTGCAGAGGGTCTAGTTGA+AGG | - | chr3_4:25445418-25445437 | Msa0495820:intron | 55.0% | |
| GCAGAGGGTCTAGTTGAAGG+TGG | - | chr3_4:25445421-25445440 | Msa0495820:intron | 55.0% | |
| CTTCCGCTGCAGATGGGTAG+GGG | - | chr3_4:25441660-25441679 | Msa0495820:intron | 60.0% | |
| ATGCCTCTGTCCCATCTGGG+AGG | - | chr3_4:25443045-25443064 | Msa0495820:intron | 60.0% | |
| ACCCCGAAGAACGTTGCAGC+AGG | - | chr3_4:25443120-25443139 | Msa0495820:CDS | 60.0% | |
| GCCTGCTGCAACGTTCTTCG+GGG | + | chr3_4:25443124-25443143 | None:intergenic | 60.0% | |
| CGCCTGCTGCAACGTTCTTC+GGG | + | chr3_4:25443125-25443144 | None:intergenic | 60.0% | |
| GCGCCTGCTGCAACGTTCTT+CGG | + | chr3_4:25443126-25443145 | None:intergenic | 60.0% | |
| TAGGGGAGAGAGCAGCTCTC+CGG | + | chr3_4:25443468-25443487 | None:intergenic | 60.0% | |
| CTGCTCTCTCCCCTAGACGT+AGG | - | chr3_4:25443473-25443492 | Msa0495820:intron | 60.0% | |
| AGCATCTGGTGCATGGCAGG+TGG | + | chr3_4:25443925-25443944 | None:intergenic | 60.0% | |
| GGCGTCCAACAGCCGTTAGA+CGG | + | chr3_4:25444998-25445017 | None:intergenic | 60.0% | |
| GACCCTCTGCAGCCTTCTCA+AGG | + | chr3_4:25445411-25445430 | None:intergenic | 60.0% | |
| CCTCTGTCCCATCTGGGAGG+CGG | - | chr3_4:25443048-25443067 | Msa0495820:intron | 65.0% | |
| CTCTGTCCCATCTGGGAGGC+GGG | - | chr3_4:25443049-25443068 | Msa0495820:intron | 65.0% | |
| CCGCCTCCCAGATGGGACAG+AGG | + | chr3_4:25443051-25443070 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 25438199 | 25446662 | 25438199 | ID=Msa0495820;Name=Msa0495820 |
| chr3_4 | mRNA | 25438199 | 25446662 | 25438199 | ID=Msa0495820-mRNA-1;Parent=Msa0495820;Name=Msa0495820-mRNA-1;_AED=0.16;_eAED=0.16;_QI=153|0.91|0.92|1|0.83|0.76|13|337|333 |
| chr3_4 | exon | 25438199 | 25438599 | 25438199 | ID=Msa0495820-mRNA-1:exon:6153;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25439415 | 25439512 | 25439415 | ID=Msa0495820-mRNA-1:exon:6152;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25439827 | 25439952 | 25439827 | ID=Msa0495820-mRNA-1:exon:6151;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25440376 | 25440459 | 25440376 | ID=Msa0495820-mRNA-1:exon:6150;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25440545 | 25440661 | 25440545 | ID=Msa0495820-mRNA-1:exon:6149;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25440917 | 25441000 | 25440917 | ID=Msa0495820-mRNA-1:exon:6148;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25442058 | 25442105 | 25442058 | ID=Msa0495820-mRNA-1:exon:6147;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25442435 | 25442524 | 25442435 | ID=Msa0495820-mRNA-1:exon:6146;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25443105 | 25443189 | 25443105 | ID=Msa0495820-mRNA-1:exon:6145;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25443274 | 25443347 | 25443274 | ID=Msa0495820-mRNA-1:exon:6144;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25444007 | 25444073 | 25444007 | ID=Msa0495820-mRNA-1:exon:6143;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25446353 | 25446464 | 25446353 | ID=Msa0495820-mRNA-1:exon:6142;Parent=Msa0495820-mRNA-1 |
| chr3_4 | exon | 25446557 | 25446662 | 25446557 | ID=Msa0495820-mRNA-1:exon:6141;Parent=Msa0495820-mRNA-1 |
| chr3_4 | five_prime_UTR | 25446557 | 25446662 | 25446557 | ID=Msa0495820-mRNA-1:five_prime_utr;Parent=Msa0495820-mRNA-1 |
| chr3_4 | five_prime_UTR | 25446418 | 25446464 | 25446418 | ID=Msa0495820-mRNA-1:five_prime_utr;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25446353 | 25446417 | 25446353 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25444007 | 25444073 | 25444007 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25443274 | 25443347 | 25443274 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25443105 | 25443189 | 25443105 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25442435 | 25442524 | 25442435 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25442058 | 25442105 | 25442058 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25440917 | 25441000 | 25440917 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25440545 | 25440661 | 25440545 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25440376 | 25440459 | 25440376 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25439827 | 25439952 | 25439827 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25439415 | 25439512 | 25439415 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | CDS | 25438536 | 25438599 | 25438536 | ID=Msa0495820-mRNA-1:cds;Parent=Msa0495820-mRNA-1 |
| chr3_4 | three_prime_UTR | 25438199 | 25438535 | 25438199 | ID=Msa0495820-mRNA-1:three_prime_utr;Parent=Msa0495820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
