Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333210 | sp|Q9LRP1|NPS13_ARATH | 84.470 | 264 | 40 | 1 | 1 | 263 | 1 | 264 | 1.62e-155 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333210 | G7JQ41 | 100.000 | 269 | 0 | 0 | 1 | 269 | 1 | 269 | 0.0 | 551 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037180 | Msa1333210 | 0.827150 | 1.834250e-54 | -8.615850e-47 |
| Msa0040860 | Msa1333210 | -0.802494 | 5.461728e-49 | -8.615850e-47 |
| Msa0092220 | Msa1333210 | 0.810316 | 1.224874e-50 | -8.615850e-47 |
| Msa0608820 | Msa1333210 | 0.813890 | 2.035487e-51 | -8.615850e-47 |
| Msa0610700 | Msa1333210 | -0.802248 | 6.140097e-49 | -8.615850e-47 |
| Msa0621670 | Msa1333210 | -0.819241 | 1.287543e-52 | -8.615850e-47 |
| Msa0683200 | Msa1333210 | -0.803512 | 3.364811e-49 | -8.615850e-47 |
| Msa0691610 | Msa1333210 | 0.800707 | 1.270054e-48 | -8.615850e-47 |
| Msa0718360 | Msa1333210 | 0.802670 | 5.026062e-49 | -8.615850e-47 |
| Msa0759430 | Msa1333210 | 0.819408 | 1.180001e-52 | -8.615850e-47 |
| Msa0163960 | Msa1333210 | -0.800691 | 1.279781e-48 | -8.615850e-47 |
| Msa0177320 | Msa1333210 | 0.808505 | 2.997343e-50 | -8.615850e-47 |
| Msa0180100 | Msa1333210 | -0.830070 | 3.611377e-55 | -8.615850e-47 |
| Msa0184510 | Msa1333210 | -0.833005 | 6.836874e-56 | -8.615850e-47 |
| Msa0207680 | Msa1333210 | 0.804574 | 2.023765e-49 | -8.615850e-47 |
| Msa1236860 | Msa1333210 | -0.804504 | 2.092820e-49 | -8.615850e-47 |
| Msa1297220 | Msa1333210 | -0.822599 | 2.173013e-53 | -8.615850e-47 |
| Msa1303820 | Msa1333210 | -0.811592 | 6.482595e-51 | -8.615850e-47 |
| Msa1333210 | Msa1333240 | 0.833886 | 4.120524e-56 | -8.615850e-47 |
| Msa1333210 | Msa1343450 | -0.833630 | 4.777186e-56 | -8.615850e-47 |
| Msa1333210 | Msa1363070 | -0.811723 | 6.070884e-51 | -8.615850e-47 |
| Msa1333210 | Msa1371300 | 0.852990 | 3.212077e-61 | -8.615850e-47 |
| Msa1333210 | Msa1460530 | -0.816406 | 5.620663e-52 | -8.615850e-47 |
| Msa0378310 | Msa1333210 | -0.821624 | 3.656500e-53 | -8.615850e-47 |
| Msa0382860 | Msa1333210 | 0.850807 | 1.337190e-60 | -8.615850e-47 |
| Msa0432940 | Msa1333210 | 0.841461 | 4.687014e-58 | -8.615850e-47 |
| Msa0432970 | Msa1333210 | 0.845181 | 4.766191e-59 | -8.615850e-47 |
| Msa0436840 | Msa1333210 | 0.973826 | 4.320864e-137 | -8.615850e-47 |
| Msa0477030 | Msa1333210 | 0.848659 | 5.324269e-60 | -8.615850e-47 |
| Msa1024570 | Msa1333210 | 0.833618 | 4.808425e-56 | -8.615850e-47 |
| Msa1031180 | Msa1333210 | 0.843862 | 1.079468e-58 | -8.615850e-47 |
| Msa1063190 | Msa1333210 | 0.859864 | 3.078990e-63 | -8.615850e-47 |
| Msa1070360 | Msa1333210 | 0.826452 | 2.691958e-54 | -8.615850e-47 |
| Msa1078590 | Msa1333210 | -0.805241 | 1.467727e-49 | -8.615850e-47 |
| Msa1078760 | Msa1333210 | -0.805002 | 1.647108e-49 | -8.615850e-47 |
| Msa0256540 | Msa1333210 | 0.802647 | 5.080240e-49 | -8.615850e-47 |
| Msa0266140 | Msa1333210 | -0.806989 | 6.290689e-50 | -8.615850e-47 |
| Msa0275560 | Msa1333210 | 0.803825 | 2.898041e-49 | -8.615850e-47 |
| Msa0304060 | Msa1333210 | -0.809340 | 1.986396e-50 | -8.615850e-47 |
| Msa1119430 | Msa1333210 | 0.841762 | 3.903745e-58 | -8.615850e-47 |
| Msa1190350 | Msa1333210 | -0.806770 | 6.998905e-50 | -8.615850e-47 |
| Msa1205270 | Msa1333210 | -0.813711 | 2.228771e-51 | -8.615850e-47 |
| Msa1209160 | Msa1333210 | -0.810420 | 1.162780e-50 | -8.615850e-47 |
| Msa1219540 | Msa1333210 | 0.970175 | 3.218019e-131 | -8.615850e-47 |
| Msa0495820 | Msa1333210 | 0.805141 | 1.540773e-49 | -8.615850e-47 |
| Msa0548160 | Msa1333210 | -0.806122 | 9.589914e-50 | -8.615850e-47 |
| Msa0563440 | Msa1333210 | 0.803976 | 2.696123e-49 | -8.615850e-47 |
| Msa0579170 | Msa1333210 | -0.809424 | 1.905290e-50 | -8.615850e-47 |
| Msa0579230 | Msa1333210 | -0.817626 | 2.991727e-52 | -8.615850e-47 |
| Msa0887100 | Msa1333210 | -0.814009 | 1.915733e-51 | -8.615850e-47 |
| Msa0913140 | Msa1333210 | -0.823440 | 1.383884e-53 | -8.615850e-47 |
| Msa0931550 | Msa1333210 | -0.838512 | 2.751303e-57 | -8.615850e-47 |
| Msa0950470 | Msa1333210 | -0.824460 | 7.975722e-54 | -8.615850e-47 |
| Msa0950570 | Msa1333210 | -0.821587 | 3.729939e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333210 | MtrunA17_Chr4g0069271 | 100.000 | 269 | 0 | 0 | 1 | 269 | 1 | 269 | 0.0 | 551 |
| Msa1333210 | MtrunA17_Chr2g0302561 | 88.679 | 265 | 30 | 0 | 1 | 265 | 1 | 265 | 1.33e-167 | 464 |
| Msa1333210 | MtrunA17_Chr4g0055321 | 64.202 | 257 | 87 | 2 | 7 | 261 | 7 | 260 | 5.63e-105 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333210 | AT3G17440.1 | 84.470 | 264 | 40 | 1 | 1 | 263 | 1 | 264 | 1.65e-156 | 436 |
| Msa1333210 | AT1G48240.1 | 83.333 | 264 | 43 | 1 | 1 | 263 | 1 | 264 | 2.19e-154 | 431 |
| Msa1333210 | AT3G17440.2 | 83.568 | 213 | 34 | 1 | 1 | 212 | 1 | 213 | 9.41e-126 | 357 |
| Msa1333210 | AT1G48240.2 | 84.038 | 213 | 33 | 1 | 52 | 263 | 1 | 213 | 1.89e-122 | 348 |
| Msa1333210 | AT2G35190.1 | 67.954 | 259 | 76 | 3 | 7 | 261 | 7 | 262 | 3.79e-111 | 321 |
Find 92 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTAACAATCCAAATATTT+AGG | 0.090500 | 8_4:-53237432 | Msa1333210:three_prime_UTR |
| TCTCTCTAGCCCTAAATATT+TGG | 0.162380 | 8_4:+53237422 | None:intergenic |
| AATATTAGAGGATTGCTTTC+TGG | 0.171816 | 8_4:-53237578 | Msa1333210:three_prime_UTR |
| GAATGAATGTGTTTGAAAAT+TGG | 0.232521 | 8_4:+53242425 | None:intergenic |
| CTTTAATCTTATCCAGCTTC+TGG | 0.274677 | 8_4:+53241239 | None:intergenic |
| ATCCCAACAACAAAGATATT+AGG | 0.293546 | 8_4:-53237743 | Msa1333210:CDS |
| TGTAACAATCCAAATATTTA+GGG | 0.294643 | 8_4:-53237431 | Msa1333210:three_prime_UTR |
| AGTTGCTTGTTCACTTCTTC+GGG | 0.302974 | 8_4:+53240524 | None:intergenic |
| GAGTTGCTTGTTCACTTCTT+CGG | 0.321882 | 8_4:+53240523 | None:intergenic |
| TTTGCAGTCCCTCATCTTCC+CGG | 0.331240 | 8_4:+53241180 | None:intergenic |
| CAGCTGAGTACTTTGTCTAT+TGG | 0.333441 | 8_4:+53241213 | None:intergenic |
| CCTTCAAGGTAGAAGCAGTT+TGG | 0.343816 | 8_4:+53238438 | None:intergenic |
| TCCCAACAACAAAGATATTA+GGG | 0.359712 | 8_4:-53237742 | Msa1333210:CDS |
| CTTCAAGGTAGAAGCAGTTT+GGG | 0.360070 | 8_4:+53238439 | None:intergenic |
| TTTGAAACTATTTGTTGAAT+CGG | 0.373263 | 8_4:-53237291 | Msa1333210:three_prime_UTR |
| ATCCCTAATATCTTTGTTGT+TGG | 0.373848 | 8_4:+53237740 | None:intergenic |
| CAAACTTACTTGGCCCTTCA+AGG | 0.377735 | 8_4:+53238424 | None:intergenic |
| TCTTATCAATCGAATATTAG+AGG | 0.380556 | 8_4:-53237590 | Msa1333210:three_prime_UTR |
| CCAAACTGCTTCTACCTTGA+AGG | 0.383146 | 8_4:-53238438 | Msa1333210:CDS |
| TCCCTAATATCTTTGTTGTT+GGG | 0.383563 | 8_4:+53237741 | None:intergenic |
| TCCCAACTTGTTAAGGAGAT+TGG | 0.395927 | 8_4:-53238256 | Msa1333210:CDS |
| TCATACCTTCACGACAATAA+TGG | 0.396104 | 8_4:+53238082 | None:intergenic |
| CTACTTGTACTTGAAATTTG+TGG | 0.402605 | 8_4:-53237389 | Msa1333210:three_prime_UTR |
| AAAAGCCTCCTTGAGGGAAC+TGG | 0.407527 | 8_4:+53237699 | None:intergenic |
| GAAGGCCTCCCAACTTGTTA+AGG | 0.410294 | 8_4:-53238263 | Msa1333210:CDS |
| TTGAAACTATTTGTTGAATC+GGG | 0.411278 | 8_4:-53237290 | Msa1333210:three_prime_UTR |
| AAAGATATTAGGGATATTCC+AGG | 0.415143 | 8_4:-53237732 | Msa1333210:CDS |
| CAATTCTAGTCCTGCCAACT+TGG | 0.415915 | 8_4:-53237620 | Msa1333210:three_prime_UTR |
| AATCAAGAACTTGTCAATGC+TGG | 0.416592 | 8_4:-53238611 | Msa1333210:CDS |
| AATCATGCAGACTGAACAAA+TGG | 0.425940 | 8_4:-53238329 | Msa1333210:intron |
| GGAACTGGAGGCGCCAATCC+TGG | 0.433221 | 8_4:+53237714 | None:intergenic |
| TGTTAAGGAGATTGGTAGAC+AGG | 0.437254 | 8_4:-53238248 | Msa1333210:intron |
| ACCAATCTCCTTAACAAGTT+GGG | 0.449301 | 8_4:+53238255 | None:intergenic |
| CAGAAATGGCTTCCAGAAGC+TGG | 0.449482 | 8_4:-53241251 | Msa1333210:CDS |
| TGCCAATTGAACATTTCCTT+CGG | 0.451709 | 8_4:+53239762 | None:intergenic |
| CATGGATCTGTTCGAGCTGA+GGG | 0.453043 | 8_4:+53242229 | None:intergenic |
| AGCCGAAGGAAATGTTCAAT+TGG | 0.469264 | 8_4:-53239764 | Msa1333210:CDS |
| GATCGTGAAATTAAAGATGA+AGG | 0.472497 | 8_4:-53240557 | Msa1333210:CDS |
| GGAAATGTTCAATTGGCATC+AGG | 0.483291 | 8_4:-53239757 | Msa1333210:intron |
| TACCAATCTCCTTAACAAGT+TGG | 0.487013 | 8_4:+53238254 | None:intergenic |
| TATTAGGGATATTCCAGGAT+TGG | 0.491096 | 8_4:-53237727 | Msa1333210:CDS |
| ATCAAGAACTTGTCAATGCT+GGG | 0.492269 | 8_4:-53238610 | Msa1333210:CDS |
| CAATAGACAAAGTACTCAGC+TGG | 0.497315 | 8_4:-53241212 | Msa1333210:CDS |
| ACACAACGGAACGCAGAAGT+TGG | 0.500757 | 8_4:+53242518 | None:intergenic |
| GTACATCAAACAATTGAAGT+TGG | 0.510767 | 8_4:-53238464 | Msa1333210:CDS |
| AATCAAGCTCATTAACAATA+CGG | 0.513503 | 8_4:+53238305 | None:intergenic |
| GGAAGATGAGGGACTGCAAA+AGG | 0.516525 | 8_4:-53241177 | Msa1333210:intron |
| CATCTTCAAGTTGGAAGCCA+TGG | 0.518612 | 8_4:+53242254 | None:intergenic |
| AACTCAATCTCCCGCATCCA+TGG | 0.519687 | 8_4:-53242271 | Msa1333210:exon |
| ACTCAGCTGGAGGAACTCAC+CGG | 0.523198 | 8_4:-53241199 | Msa1333210:CDS |
| GAAATTAAAGATGAAGGTGC+AGG | 0.526092 | 8_4:-53240551 | Msa1333210:CDS |
| GGCTATTGAGAGATCTAAGC+AGG | 0.527773 | 8_4:-53238561 | Msa1333210:intron |
| CTGAGGGGTCATCTTCAAGT+TGG | 0.529082 | 8_4:+53242245 | None:intergenic |
| CCATGGATCTGTTCGAGCTG+AGG | 0.533024 | 8_4:+53242228 | None:intergenic |
| GAGTTTAACCCTCAAAATCC+CGG | 0.534542 | 8_4:+53242289 | None:intergenic |
| GTTGTTGTTGTTGATGAGAG+AGG | 0.538666 | 8_4:+53242350 | None:intergenic |
| TTGTTGTTAATTGAGAAGAA+AGG | 0.541556 | 8_4:+53242389 | None:intergenic |
| ACGTACAAAAGCCTCCTTGA+GGG | 0.543026 | 8_4:+53237693 | None:intergenic |
| CAATGACGAAAAGCAATCAA+TGG | 0.543601 | 8_4:-53240501 | Msa1333210:intron |
| TTTCTGTTTCTTATCGTCTG+TGG | 0.544072 | 8_4:-53238113 | Msa1333210:CDS |
| CAAGTTGGAAGCCATGGATG+CGG | 0.544349 | 8_4:+53242260 | None:intergenic |
| AAGTTGGAAGCCATGGATGC+GGG | 0.545305 | 8_4:+53242261 | None:intergenic |
| AGAACAAGAACCAAGTTGGC+AGG | 0.550428 | 8_4:+53237610 | None:intergenic |
| AACAGGTACATGAATACGAT+TGG | 0.551437 | 8_4:-53239838 | Msa1333210:intron |
| AAGATGCATACGCGAGGGCA+CGG | 0.552215 | 8_4:+53242187 | None:intergenic |
| GCTTAGATCTCTCAATAGCC+TGG | 0.553529 | 8_4:+53238564 | None:intergenic |
| GATAAGAACAAGAACCAAGT+TGG | 0.555394 | 8_4:+53237606 | None:intergenic |
| CAAACTGCTTCTACCTTGAA+GGG | 0.570444 | 8_4:-53238437 | Msa1333210:CDS |
| AGGAACTCACCGGGAAGATG+AGG | 0.575887 | 8_4:-53241189 | Msa1333210:CDS |
| ATTAGAGGATTGCTTTCTGG+AGG | 0.581140 | 8_4:-53237575 | Msa1333210:three_prime_UTR |
| TGGCGCCTCCAGTTCCCTCA+AGG | 0.584416 | 8_4:-53237707 | Msa1333210:CDS |
| CGCCTCCAGTTCCCTCAAGG+AGG | 0.588015 | 8_4:-53237704 | Msa1333210:CDS |
| ATTAAGAGACGTGGCACTCG+AGG | 0.588508 | 8_4:+53237453 | None:intergenic |
| CAAGGAGCTAAACTCATATG+TGG | 0.596320 | 8_4:-53240116 | Msa1333210:CDS |
| GGAACTCACCGGGAAGATGA+GGG | 0.597027 | 8_4:-53241188 | Msa1333210:CDS |
| AGCCTCCTTGAGGGAACTGG+AGG | 0.604127 | 8_4:+53237702 | None:intergenic |
| CCTCAGCTCGAACAGATCCA+TGG | 0.604752 | 8_4:-53242228 | Msa1333210:CDS |
| CTCAGCTGGAGGAACTCACC+GGG | 0.605565 | 8_4:-53241198 | Msa1333210:CDS |
| TGTAAATGTGTCTAATTCAG+AGG | 0.607175 | 8_4:-53237366 | Msa1333210:three_prime_UTR |
| GATTGCCATTATTGTCGTGA+AGG | 0.622761 | 8_4:-53238087 | Msa1333210:intron |
| ATCATGCAGACTGAACAAAT+GGG | 0.622906 | 8_4:-53238328 | Msa1333210:intron |
| GCAAGTGAATCTACAGCCGA+AGG | 0.626899 | 8_4:-53239778 | Msa1333210:CDS |
| GACAATGGATGAGACTGACC+AGG | 0.634633 | 8_4:-53238582 | Msa1333210:CDS |
| AATCTCCTTAACAAGTTGGG+AGG | 0.641193 | 8_4:+53238258 | None:intergenic |
| CAGAAGTTGGACATGTGCTG+TGG | 0.658857 | 8_4:+53242531 | None:intergenic |
| CAATGCTGGGATGAAGACAA+TGG | 0.665195 | 8_4:-53238597 | Msa1333210:CDS |
| TAGACAAAGTACTCAGCTGG+AGG | 0.671294 | 8_4:-53241209 | Msa1333210:CDS |
| GATTGTTACATTAAGAGACG+TGG | 0.682955 | 8_4:+53237444 | None:intergenic |
| ACAGCACGACACAAACACAA+CGG | 0.684691 | 8_4:+53242504 | None:intergenic |
| TACGTACAAAAGCCTCCTTG+AGG | 0.702572 | 8_4:+53237692 | None:intergenic |
| ATGGATCTGTTCGAGCTGAG+GGG | 0.705029 | 8_4:+53242230 | None:intergenic |
| AGATGTCACGAATTTCACCA+TGG | 0.723900 | 8_4:+53242211 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATAACACAA+TGG | + | chr8_4:53239528-53239547 | None:intergenic | 10.0% |
| !! | AAAACTTCTATTTATATATA+AGG | + | chr8_4:53239877-53239896 | None:intergenic | 10.0% |
| !!! | TTTTCTCATTTTATTTATTT+TGG | - | chr8_4:53240856-53240875 | Msa1333210:intron | 10.0% |
| !!! | TTTCTCATTTTATTTATTTT+GGG | - | chr8_4:53240857-53240876 | Msa1333210:intron | 10.0% |
| !! | GATTTGATTAATAATAATGT+GGG | - | chr8_4:53238898-53238917 | Msa1333210:intron | 15.0% |
| !!! | TAAATTTGATAGTTGTTTTT+TGG | - | chr8_4:53238993-53239012 | Msa1333210:intron | 15.0% |
| !!! | AAATTTGATAGTTGTTTTTT+GGG | - | chr8_4:53238994-53239013 | Msa1333210:intron | 15.0% |
| !!! | AAATAGAAGTTTTATTCTTT+TGG | - | chr8_4:53239884-53239903 | Msa1333210:intron | 15.0% |
| !! | ATAAAATTATTAGAGCAAAT+TGG | + | chr8_4:53241787-53241806 | None:intergenic | 15.0% |
| !!! | TCAACTATTTTAAATAACTT+TGG | - | chr8_4:53241825-53241844 | Msa1333210:intron | 15.0% |
| !!! | GCAAAGAAAAAAATGAATTT+TGG | + | chr8_4:53237476-53237495 | None:intergenic | 20.0% |
| !!! | AAATTCATTTTTTTCTTTGC+CGG | - | chr8_4:53237476-53237495 | Msa1333210:three_prime_UTR | 20.0% |
| !! | GATATATAAATCAACAAAGT+TGG | - | chr8_4:53237831-53237850 | Msa1333210:intron | 20.0% |
| !!! | GTTTTAATTAAGAAGTGATA+GGG | + | chr8_4:53238353-53238372 | None:intergenic | 20.0% |
| !!! | TGTTTTAATTAAGAAGTGAT+AGG | + | chr8_4:53238354-53238373 | None:intergenic | 20.0% |
| !! | TAAGAACTTATATGCTTATA+AGG | + | chr8_4:53238405-53238424 | None:intergenic | 20.0% |
| !! | TTTAGTAGTGAAAAACTAAA+GGG | + | chr8_4:53238825-53238844 | None:intergenic | 20.0% |
| !! | ATTTAGTAGTGAAAAACTAA+AGG | + | chr8_4:53238826-53238845 | None:intergenic | 20.0% |
| !! | CATAAACAAAACTTCTATAA+TGG | - | chr8_4:53238848-53238867 | Msa1333210:intron | 20.0% |
| !! | CATTATTATTAATCAAATCC+TGG | + | chr8_4:53238897-53238916 | None:intergenic | 20.0% |
| !! | GGATTTGATTAATAATAATG+TGG | - | chr8_4:53238897-53238916 | Msa1333210:intron | 20.0% |
| !! | TAAAATATTCTATATAGAGC+GGG | + | chr8_4:53238967-53238986 | None:intergenic | 20.0% |
| !! | CTAAAATATTCTATATAGAG+CGG | + | chr8_4:53238968-53238987 | None:intergenic | 20.0% |
| !!! | ATTTTTTCAAACATCAATGT+TGG | - | chr8_4:53239074-53239093 | Msa1333210:intron | 20.0% |
| !!! | TACATTTCATGATTTCTTTT+TGG | - | chr8_4:53239132-53239151 | Msa1333210:intron | 20.0% |
| !!! | TTCTTTTTGGAATTTGTTAA+TGG | - | chr8_4:53239145-53239164 | Msa1333210:intron | 20.0% |
| !!! | TTTTGAATTTCAAATCTAAG+AGG | + | chr8_4:53240736-53240755 | None:intergenic | 20.0% |
| !!! | CTTAGATTTGAAATTCAAAA+CGG | - | chr8_4:53240549-53240568 | Msa1333210:CDS | 20.0% |
| !!! | TTAGATTTGAAATTCAAAAC+GGG | - | chr8_4:53240550-53240569 | Msa1333210:CDS | 20.0% |
| !! | TCCTTAAAAGAGTTATAAAA+AGG | - | chr8_4:53240684-53240703 | Msa1333210:intron | 20.0% |
| !!! | TCCTTTTTATAACTCTTTTA+AGG | + | chr8_4:53240688-53240707 | None:intergenic | 20.0% |
| !!! | TTAGATTTGAAATTCAAAAC+AGG | + | chr8_4:53240550-53240569 | None:intergenic | 20.0% |
| !!! | TTTTGAATTTCAAATCTAAG+AGG | - | chr8_4:53240736-53240755 | Msa1333210:intron | 20.0% |
| !! | TAAAATAAGATAAATGGTGT+GGG | + | chr8_4:53241280-53241299 | None:intergenic | 20.0% |
| !! | TTAAAATAAGATAAATGGTG+TGG | + | chr8_4:53241281-53241300 | None:intergenic | 20.0% |
| !!! | AATTCAGTTTTCAATAAAGA+AGG | - | chr8_4:53241503-53241522 | Msa1333210:intron | 20.0% |
| !!! | CTTTAATTTCCTTGTTTATA+TGG | - | chr8_4:53241562-53241581 | Msa1333210:intron | 20.0% |
| !! | AGAGAATATATCAACAAATT+AGG | + | chr8_4:53241751-53241770 | None:intergenic | 20.0% |
| !! | TGAAAAAAGAAAGAATTAAC+TGG | + | chr8_4:53242251-53242270 | None:intergenic | 20.0% |
| !! | ATGTAACAATCCAAATATTT+AGG | - | chr8_4:53242352-53242371 | Msa1333210:five_prime_UTR | 20.0% |
| !! | TGTAACAATCCAAATATTTA+GGG | - | chr8_4:53242353-53242372 | Msa1333210:five_prime_UTR | 20.0% |
| !! | ATACTACACATCAAAAAATA+GGG | + | chr8_4:53242459-53242478 | None:intergenic | 20.0% |
| !! | TATACTACACATCAAAAAAT+AGG | + | chr8_4:53242460-53242479 | None:intergenic | 20.0% |
| !!! | TTTGAAACTATTTGTTGAAT+CGG | - | chr8_4:53242493-53242512 | Msa1333210:five_prime_UTR | 20.0% |
| ! | GAATGAATGTGTTTGAAAAT+TGG | + | chr8_4:53237362-53237381 | None:intergenic | 25.0% |
| !! | TTGTTGTTAATTGAGAAGAA+AGG | + | chr8_4:53237398-53237417 | None:intergenic | 25.0% |
| !!! | AATTCATTTTTTTCTTTGCC+GGG | - | chr8_4:53237477-53237496 | Msa1333210:three_prime_UTR | 25.0% |
| !!! | AATTTGTAAAAGCATTGATG+AGG | + | chr8_4:53237669-53237688 | None:intergenic | 25.0% |
| ! | GTTGTTATAGTTGAAAGTTT+AGG | - | chr8_4:53237800-53237819 | Msa1333210:intron | 25.0% |
| !! | AGTTATGTAGTTCAACATTT+TGG | - | chr8_4:53237869-53237888 | Msa1333210:intron | 25.0% |
| ! | TCAATAACGACTTAAACAAT+AGG | + | chr8_4:53238433-53238452 | None:intergenic | 25.0% |
| ! | GATATTTAGTGGTAAACAAA+GGG | + | chr8_4:53238713-53238732 | None:intergenic | 25.0% |
| ! | TGATATTTAGTGGTAAACAA+AGG | + | chr8_4:53238714-53238733 | None:intergenic | 25.0% |
| !! | CTCTTGTTTATGATATTTAG+TGG | + | chr8_4:53238724-53238743 | None:intergenic | 25.0% |
| ! | CACTAAATATCATAAACAAG+AGG | - | chr8_4:53238722-53238741 | Msa1333210:intron | 25.0% |
| ! | TTAGTAGTGAAAAACTAAAG+GGG | + | chr8_4:53238824-53238843 | None:intergenic | 25.0% |
| ! | ATTATTAATCAAATCCTGGA+AGG | + | chr8_4:53238893-53238912 | None:intergenic | 25.0% |
| ! | AAAATATTCTATATAGAGCG+GGG | + | chr8_4:53238966-53238985 | None:intergenic | 25.0% |
| !! | CGCTCTATATAGAATATTTT+AGG | - | chr8_4:53238966-53238985 | Msa1333210:intron | 25.0% |
| !! | TTGACTACACATTTTATAGA+CGG | - | chr8_4:53239045-53239064 | Msa1333210:intron | 25.0% |
| !! | ATGTTTCTATTAATGTCATC+AGG | - | chr8_4:53239189-53239208 | Msa1333210:intron | 25.0% |
| ! | AACATGACCAAGAAAAAAAA+GGG | + | chr8_4:53239321-53239340 | None:intergenic | 25.0% |
| !! | GAGACTAAATTTTGCTTTAT+TGG | + | chr8_4:53239855-53239874 | None:intergenic | 25.0% |
| !! | AAAACTTGAACTTTTTGACA+TGG | - | chr8_4:53239975-53239994 | Msa1333210:intron | 25.0% |
| !! | AAACTTGAACTTTTTGACAT+GGG | - | chr8_4:53239976-53239995 | Msa1333210:intron | 25.0% |
| ! | TGAATGCAATATCAAAACTT+GGG | + | chr8_4:53240334-53240353 | None:intergenic | 25.0% |
| !!! | TCATGTTGTTTTGGATTTTT+GGG | + | chr8_4:53240418-53240437 | None:intergenic | 25.0% |
| !!! | ATGATTTTCTCATGTTGTTT+TGG | + | chr8_4:53240427-53240446 | None:intergenic | 25.0% |
| ! | ATTCTACAACAGAAATATAG+TGG | + | chr8_4:53240979-53240998 | None:intergenic | 25.0% |
| ! | CAGGGTTAAAATAAGATAAA+TGG | + | chr8_4:53241286-53241305 | None:intergenic | 25.0% |
| ! | CAATTCAAATCAAACTTACT+TGG | + | chr8_4:53241373-53241392 | None:intergenic | 25.0% |
| ! | AATCAAGCTCATTAACAATA+CGG | + | chr8_4:53241482-53241501 | None:intergenic | 25.0% |
| ! | ACATTATTCTACTTGAGAAA+AGG | - | chr8_4:53241852-53241871 | Msa1333210:intron | 25.0% |
| ! | TCTTATCAATCGAATATTAG+AGG | - | chr8_4:53242194-53242213 | Msa1333210:intron | 25.0% |
| ! | TACTACACATCAAAAAATAG+GGG | + | chr8_4:53242458-53242477 | None:intergenic | 25.0% |
| !! | TTGAAACTATTTGTTGAATC+GGG | - | chr8_4:53242494-53242513 | Msa1333210:five_prime_UTR | 25.0% |
| ATCAACAACAACAACAACTT+AGG | - | chr8_4:53237442-53237461 | Msa1333210:three_prime_UTR | 30.0% | |
| TCAACAACAACAACAACTTA+GGG | - | chr8_4:53237443-53237462 | Msa1333210:three_prime_UTR | 30.0% | |
| !! | GACGAAAATTTGATTTGAGA+GGG | + | chr8_4:53237751-53237770 | None:intergenic | 30.0% |
| !! | TGACGAAAATTTGATTTGAG+AGG | + | chr8_4:53237752-53237771 | None:intergenic | 30.0% |
| !! | CACAAAGTGTTGGTATAATA+GGG | + | chr8_4:53238153-53238172 | None:intergenic | 30.0% |
| !! | ACACAAAGTGTTGGTATAAT+AGG | + | chr8_4:53238154-53238173 | None:intergenic | 30.0% |
| AAGAAAGTAACACAAAGTGT+TGG | + | chr8_4:53238163-53238182 | None:intergenic | 30.0% | |
| !! | ACTTTGTGTTACTTTCTTGT+GGG | - | chr8_4:53238165-53238184 | Msa1333210:intron | 30.0% |
| TTATCAATTAGTACTAACGC+TGG | + | chr8_4:53238232-53238251 | None:intergenic | 30.0% | |
| AAGTCGTTATTGATACATGT+TGG | - | chr8_4:53238440-53238459 | Msa1333210:CDS | 30.0% | |
| ATAATGTGGGAAACAACAAA+AGG | - | chr8_4:53238911-53238930 | Msa1333210:intron | 30.0% | |
| TAATGTGGGAAACAACAAAA+GGG | - | chr8_4:53238912-53238931 | Msa1333210:intron | 30.0% | |
| ! | TGACTACACATTTTATAGAC+GGG | - | chr8_4:53239046-53239065 | Msa1333210:intron | 30.0% |
| GATCGTGAAATTAAAGATGA+AGG | - | chr8_4:53239227-53239246 | Msa1333210:intron | 30.0% | |
| !!! | ATCAGAACCCTTTTTTTTCT+TGG | - | chr8_4:53239311-53239330 | Msa1333210:intron | 30.0% |
| CAACATGACCAAGAAAAAAA+AGG | + | chr8_4:53239322-53239341 | None:intergenic | 30.0% | |
| !!! | CTTTTTTTTCTTGGTCATGT+TGG | - | chr8_4:53239320-53239339 | Msa1333210:intron | 30.0% |
| ! | ATGGTGATCACTTAATTTGA+TGG | + | chr8_4:53239470-53239489 | None:intergenic | 30.0% |
| CAAATTAAGTGATCACCATA+TGG | - | chr8_4:53239471-53239490 | Msa1333210:intron | 30.0% | |
| !!! | CAAACTTTTTTCTGACCATA+TGG | + | chr8_4:53239489-53239508 | None:intergenic | 30.0% |
| GAAAAAAGTTTGAGAATACG+AGG | - | chr8_4:53239497-53239516 | Msa1333210:intron | 30.0% | |
| !! | TTCATTTTTCTTGCAGATCA+AGG | - | chr8_4:53239650-53239669 | Msa1333210:intron | 30.0% |
| !! | TATTCTTTTGGCTAGTTGAA+AGG | - | chr8_4:53239896-53239915 | Msa1333210:intron | 30.0% |
| TTATCACTTGGATGATAAAC+AGG | - | chr8_4:53239929-53239948 | Msa1333210:intron | 30.0% | |
| ACCGCCAAATATTCATATAA+GGG | - | chr8_4:53240062-53240081 | Msa1333210:intron | 30.0% | |
| AAATATTCGGCCAGAATATT+CGG | - | chr8_4:53240177-53240196 | Msa1333210:intron | 30.0% | |
| TTTAGTATCTGATTAGGTCA+TGG | + | chr8_4:53240311-53240330 | None:intergenic | 30.0% | |
| GTGAATGCAATATCAAAACT+TGG | + | chr8_4:53240335-53240354 | None:intergenic | 30.0% | |
| !!! | CATGTTGTTTTGGATTTTTG+GGG | + | chr8_4:53240417-53240436 | None:intergenic | 30.0% |
| !!! | CTCATGTTGTTTTGGATTTT+TGG | + | chr8_4:53240419-53240438 | None:intergenic | 30.0% |
| GACGAAATTCTTATTCTCAA+AGG | - | chr8_4:53240523-53240542 | Msa1333210:CDS | 30.0% | |
| ! | AATACATTTTCTCAAGCCAA+TGG | - | chr8_4:53240900-53240919 | Msa1333210:intron | 30.0% |
| ATGTCAACTACAAATTCCAT+TGG | + | chr8_4:53240919-53240938 | None:intergenic | 30.0% | |
| TATTTGCAATAGCATACTTC+AGG | - | chr8_4:53241023-53241042 | Msa1333210:intron | 30.0% | |
| ! | TCTTGATTTGACATTTCTGT+AGG | + | chr8_4:53241161-53241180 | None:intergenic | 30.0% |
| ! | TTTTAACCCTGTCAAAATGT+AGG | - | chr8_4:53241295-53241314 | Msa1333210:intron | 30.0% |
| GTACATCAAACAATTGAAGT+TGG | - | chr8_4:53241320-53241339 | Msa1333210:intron | 30.0% | |
| GAATTGAGTATGCTATAAGA+AGG | - | chr8_4:53241387-53241406 | Msa1333210:intron | 30.0% | |
| ATCCCAACAACAAAGATATT+AGG | - | chr8_4:53242041-53242060 | Msa1333210:intron | 30.0% | |
| TCCCAACAACAAAGATATTA+GGG | - | chr8_4:53242042-53242061 | Msa1333210:intron | 30.0% | |
| !! | TCCCTAATATCTTTGTTGTT+GGG | + | chr8_4:53242046-53242065 | None:intergenic | 30.0% |
| ! | ATCCCTAATATCTTTGTTGT+TGG | + | chr8_4:53242047-53242066 | None:intergenic | 30.0% |
| AAAGATATTAGGGATATTCC+AGG | - | chr8_4:53242052-53242071 | Msa1333210:intron | 30.0% | |
| AATATTAGAGGATTGCTTTC+TGG | - | chr8_4:53242206-53242225 | Msa1333210:CDS | 30.0% | |
| CTACTTGTACTTGAAATTTG+TGG | - | chr8_4:53242395-53242414 | Msa1333210:intron | 30.0% | |
| TGTAAATGTGTCTAATTCAG+AGG | - | chr8_4:53242418-53242437 | Msa1333210:five_prime_UTR | 30.0% | |
| TTATTATGTGCAAGAGATCG+TGG | - | chr8_4:53237702-53237721 | Msa1333210:CDS | 35.0% | |
| ! | ATCGTGGTTTTTGTTGACAT+TGG | - | chr8_4:53237718-53237737 | Msa1333210:CDS | 35.0% |
| ACCATGAACATGTATATCAG+TGG | + | chr8_4:53237897-53237916 | None:intergenic | 35.0% | |
| ACACTTACAATATGTCAACC+TGG | + | chr8_4:53237945-53237964 | None:intergenic | 35.0% | |
| GGTTGACATATTGTAAGTGT+AGG | - | chr8_4:53237945-53237964 | Msa1333210:intron | 35.0% | |
| !! | CACTTTGTGTTACTTTCTTG+TGG | - | chr8_4:53238164-53238183 | Msa1333210:intron | 35.0% |
| TTGATAAGCATCCAAGTACT+TGG | - | chr8_4:53238245-53238264 | Msa1333210:intron | 35.0% | |
| TGATAAGCATCCAAGTACTT+GGG | - | chr8_4:53238246-53238265 | Msa1333210:intron | 35.0% | |
| AATTAAGAAGTGATAGGGCA+TGG | + | chr8_4:53238348-53238367 | None:intergenic | 35.0% | |
| TATTGATACATGTTGGAGTG+TGG | - | chr8_4:53238447-53238466 | Msa1333210:CDS | 35.0% | |
| !! | GCACTTTTTGCATACAGAAA+TGG | - | chr8_4:53238519-53238538 | Msa1333210:intron | 35.0% |
| CTTTAATCTTATCCAGCTTC+TGG | + | chr8_4:53238548-53238567 | None:intergenic | 35.0% | |
| !! | GTAAACAAAGGGTGTTTGTT+TGG | + | chr8_4:53238702-53238721 | None:intergenic | 35.0% |
| CAATAACGTCTCTAACCATT+GGG | + | chr8_4:53238756-53238775 | None:intergenic | 35.0% | |
| ACAATAACGTCTCTAACCAT+TGG | + | chr8_4:53238757-53238776 | None:intergenic | 35.0% | |
| TTAATCAAATCCTGGAAGGT+TGG | + | chr8_4:53238889-53238908 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTGGGTTATCGTAC+TGG | - | chr8_4:53239006-53239025 | Msa1333210:intron | 35.0% |
| ! | GAAATTAAAGATGAAGGTGC+AGG | - | chr8_4:53239233-53239252 | Msa1333210:intron | 35.0% |
| CAATGACGAAAAGCAATCAA+TGG | - | chr8_4:53239283-53239302 | Msa1333210:intron | 35.0% | |
| !!! | TACCTCGTCAAAGTTTTGAA+AGG | - | chr8_4:53239355-53239374 | Msa1333210:intron | 35.0% |
| !!! | ACCTCGTCAAAGTTTTGAAA+GGG | - | chr8_4:53239356-53239375 | Msa1333210:intron | 35.0% |
| AAAGTTTGAGAATACGAGGA+TGG | - | chr8_4:53239501-53239520 | Msa1333210:intron | 35.0% | |
| AACAGGTACATGAATACGAT+TGG | - | chr8_4:53239946-53239965 | Msa1333210:intron | 35.0% | |
| TGCCAATTGAACATTTCCTT+CGG | + | chr8_4:53240025-53240044 | None:intergenic | 35.0% | |
| GACCGCCAAATATTCATATA+AGG | - | chr8_4:53240061-53240080 | Msa1333210:intron | 35.0% | |
| GCCCTTATATGAATATTTGG+CGG | + | chr8_4:53240066-53240085 | None:intergenic | 35.0% | |
| GAATATTCTGGCCGAATATT+TGG | + | chr8_4:53240178-53240197 | None:intergenic | 35.0% | |
| CTTGGGTTTAGTATCTGATT+AGG | + | chr8_4:53240317-53240336 | None:intergenic | 35.0% | |
| ! | ATTTTCATCCCAAAATCCCA+CGG | + | chr8_4:53240379-53240398 | None:intergenic | 35.0% |
| ATTTGATGTTTGCTCCTTTG+AGG | + | chr8_4:53240476-53240495 | None:intergenic | 35.0% | |
| TACAAGAATCTTCACTCTGA+AGG | - | chr8_4:53240501-53240520 | Msa1333210:intron | 35.0% | |
| TCATGAAAGGAGTTGCAAAA+AGG | + | chr8_4:53240600-53240619 | None:intergenic | 35.0% | |
| CACACTAAGCAAATCATGAA+AGG | + | chr8_4:53240613-53240632 | None:intergenic | 35.0% | |
| AAACCCAGACAAAATCTAAG+AGG | - | chr8_4:53240633-53240652 | Msa1333210:intron | 35.0% | |
| ! | AAGCCTCTTAGATTTTGTCT+GGG | + | chr8_4:53240639-53240658 | None:intergenic | 35.0% |
| ! | AAAGCCTCTTAGATTTTGTC+TGG | + | chr8_4:53240640-53240659 | None:intergenic | 35.0% |
| ! | AAATCTAAGAGGCTTTTGTG+TGG | - | chr8_4:53240644-53240663 | Msa1333210:intron | 35.0% |
| ! | AATCTAAGAGGCTTTTGTGT+GGG | - | chr8_4:53240645-53240664 | Msa1333210:intron | 35.0% |
| GACGAAATCCTAATTCACAA+AGG | + | chr8_4:53240762-53240781 | None:intergenic | 35.0% | |
| AGTTTGATGTTTGCTTCTTG+AGG | - | chr8_4:53240803-53240822 | Msa1333210:intron | 35.0% | |
| AAACCACACAAAAATAGCCT+AGG | + | chr8_4:53241086-53241105 | None:intergenic | 35.0% | |
| AATCAAGAACTTGTCAATGC+TGG | - | chr8_4:53241173-53241192 | Msa1333210:intron | 35.0% | |
| ATCAAGAACTTGTCAATGCT+GGG | - | chr8_4:53241174-53241193 | Msa1333210:intron | 35.0% | |
| !! | GTACAACCTACATTTTGACA+GGG | + | chr8_4:53241304-53241323 | None:intergenic | 35.0% |
| !! | TGTACAACCTACATTTTGAC+AGG | + | chr8_4:53241305-53241324 | None:intergenic | 35.0% |
| CTATAAGAAGGAAAGAGTCT+AGG | - | chr8_4:53241399-53241418 | Msa1333210:intron | 35.0% | |
| AATCATGCAGACTGAACAAA+TGG | - | chr8_4:53241455-53241474 | Msa1333210:intron | 35.0% | |
| ATCATGCAGACTGAACAAAT+GGG | - | chr8_4:53241456-53241475 | Msa1333210:intron | 35.0% | |
| ACCAATCTCCTTAACAAGTT+GGG | + | chr8_4:53241532-53241551 | None:intergenic | 35.0% | |
| TACCAATCTCCTTAACAAGT+TGG | + | chr8_4:53241533-53241552 | None:intergenic | 35.0% | |
| TACAGCAGTCCATATAAACA+AGG | + | chr8_4:53241574-53241593 | None:intergenic | 35.0% | |
| TATTTCTTCCAAACCTGTCA+TGG | - | chr8_4:53241592-53241611 | Msa1333210:intron | 35.0% | |
| ! | TTTCTGTTTCTTATCGTCTG+TGG | - | chr8_4:53241671-53241690 | Msa1333210:intron | 35.0% |
| TCATACCTTCACGACAATAA+TGG | + | chr8_4:53241705-53241724 | None:intergenic | 35.0% | |
| TGTGCACATAAACATGCAAT+AGG | + | chr8_4:53241926-53241945 | None:intergenic | 35.0% | |
| TATTAGGGATATTCCAGGAT+TGG | - | chr8_4:53242057-53242076 | Msa1333210:intron | 35.0% | |
| GATAAGAACAAGAACCAAGT+TGG | + | chr8_4:53242181-53242200 | None:intergenic | 35.0% | |
| GATTGTTACATTAAGAGACG+TGG | + | chr8_4:53242343-53242362 | None:intergenic | 35.0% | |
| TCTCTCTAGCCCTAAATATT+TGG | + | chr8_4:53242365-53242384 | None:intergenic | 35.0% | |
| ACACATCAAAAAATAGGGGA+GGG | + | chr8_4:53242454-53242473 | None:intergenic | 35.0% | |
| TACACATCAAAAAATAGGGG+AGG | + | chr8_4:53242455-53242474 | None:intergenic | 35.0% | |
| ! | GTTGTTGTTGTTGATGAGAG+AGG | + | chr8_4:53237437-53237456 | None:intergenic | 40.0% |
| ! | TTTTCTTTGCCGGGATTTTG+AGG | - | chr8_4:53237486-53237505 | Msa1333210:three_prime_UTR | 40.0% |
| ! | TTTCTTTGCCGGGATTTTGA+GGG | - | chr8_4:53237487-53237506 | Msa1333210:three_prime_UTR | 40.0% |
| GAGTTTAACCCTCAAAATCC+CGG | + | chr8_4:53237498-53237517 | None:intergenic | 40.0% | |
| AGATGTCACGAATTTCACCA+TGG | + | chr8_4:53237576-53237595 | None:intergenic | 40.0% | |
| ! | GTGGTTTTTGTTGACATTGG+AGG | - | chr8_4:53237721-53237740 | Msa1333210:CDS | 40.0% |
| GCCACTGATATACATGTTCA+TGG | - | chr8_4:53237893-53237912 | Msa1333210:intron | 40.0% | |
| GTGTAGGTAGCTAAGACTAA+TGG | - | chr8_4:53237961-53237980 | Msa1333210:intron | 40.0% | |
| ! | TAAGCAACCACCAAAGTACT+TGG | - | chr8_4:53238038-53238057 | Msa1333210:intron | 40.0% |
| ! | AAGCAACCACCAAAGTACTT+GGG | - | chr8_4:53238039-53238058 | Msa1333210:intron | 40.0% |
| TGTTGGTATAATAGGGACTC+GGG | + | chr8_4:53238146-53238165 | None:intergenic | 40.0% | |
| ! | GTGTTGGTATAATAGGGACT+CGG | + | chr8_4:53238147-53238166 | None:intergenic | 40.0% |
| ! | TTAGTACTAACGCTGGTTGT+CGG | + | chr8_4:53238225-53238244 | None:intergenic | 40.0% |
| GATAAGCATCCAAGTACTTG+GGG | - | chr8_4:53238247-53238266 | Msa1333210:intron | 40.0% | |
| ATCAAGTAGTATGGGATGCT+CGG | + | chr8_4:53238294-53238313 | None:intergenic | 40.0% | |
| CATCCCATACTACTTGATGT+GGG | - | chr8_4:53238296-53238315 | Msa1333210:CDS | 40.0% | |
| AGTCCCACATCAAGTAGTAT+GGG | + | chr8_4:53238302-53238321 | None:intergenic | 40.0% | |
| AAGTCCCACATCAAGTAGTA+TGG | + | chr8_4:53238303-53238322 | None:intergenic | 40.0% | |
| CAGCTGAGTACTTTGTCTAT+TGG | + | chr8_4:53238574-53238593 | None:intergenic | 40.0% | |
| ! | CAATAGACAAAGTACTCAGC+TGG | - | chr8_4:53238572-53238591 | Msa1333210:CDS | 40.0% |
| ATCATAAACAAGAGGAGCCT+TGG | - | chr8_4:53238730-53238749 | Msa1333210:intron | 40.0% | |
| AGAGACGTTATTGTGTGACT+AGG | - | chr8_4:53238763-53238782 | Msa1333210:intron | 40.0% | |
| AGTTGCTTGTTCACTTCTTC+GGG | + | chr8_4:53239263-53239282 | None:intergenic | 40.0% | |
| GAGTTGCTTGTTCACTTCTT+CGG | + | chr8_4:53239264-53239283 | None:intergenic | 40.0% | |
| ACCCTTTCAAAACTTTGACG+AGG | + | chr8_4:53239360-53239379 | None:intergenic | 40.0% | |
| TCAAGATCCTCCTTGTATTG+TGG | - | chr8_4:53239380-53239399 | Msa1333210:intron | 40.0% | |
| TGTCAATCCACAATACAAGG+AGG | + | chr8_4:53239390-53239409 | None:intergenic | 40.0% | |
| GAGTGTCAATCCACAATACA+AGG | + | chr8_4:53239393-53239412 | None:intergenic | 40.0% | |
| AACTCGTTACACGCAGAAAA+AGG | + | chr8_4:53239423-53239442 | None:intergenic | 40.0% | |
| CAAGGAGCTAAACTCATATG+TGG | - | chr8_4:53239668-53239687 | Msa1333210:intron | 40.0% | |
| ACGAGAAATACCAATTCCGT+AGG | - | chr8_4:53239778-53239797 | Msa1333210:CDS | 40.0% | |
| AGAAATACCAATTCCGTAGG+AGG | - | chr8_4:53239781-53239800 | Msa1333210:CDS | 40.0% | |
| !! | CTTTTGGCTAGTTGAAAGGA+CGG | - | chr8_4:53239900-53239919 | Msa1333210:intron | 40.0% |
| ! | GGACGGTTGATATTATCACT+TGG | - | chr8_4:53239917-53239936 | Msa1333210:intron | 40.0% |
| AGCCGAAGGAAATGTTCAAT+TGG | - | chr8_4:53240020-53240039 | Msa1333210:intron | 40.0% | |
| GGAAATGTTCAATTGGCATC+AGG | - | chr8_4:53240027-53240046 | Msa1333210:intron | 40.0% | |
| TTGGCATCAGGTAACATGTT+TGG | - | chr8_4:53240039-53240058 | Msa1333210:intron | 40.0% | |
| CGGGCCCTTATATGAATATT+TGG | + | chr8_4:53240069-53240088 | None:intergenic | 40.0% | |
| AATATTTGGCCTCAAGGTTC+GGG | + | chr8_4:53240164-53240183 | None:intergenic | 40.0% | |
| GAATATTTGGCCTCAAGGTT+CGG | + | chr8_4:53240165-53240184 | None:intergenic | 40.0% | |
| GAACCTTGAGGCCAAATATT+CGG | - | chr8_4:53240164-53240183 | Msa1333210:intron | 40.0% | |
| GGCCAGAATATTCGGATATA+GGG | - | chr8_4:53240185-53240204 | Msa1333210:intron | 40.0% | |
| GCCAGAATATTCGGATATAG+GGG | - | chr8_4:53240186-53240205 | Msa1333210:intron | 40.0% | |
| CCAGAATATTCGGATATAGG+GGG | - | chr8_4:53240187-53240206 | Msa1333210:intron | 40.0% | |
| !!! | GGTGCTATTATAGCCCTTTT+GGG | + | chr8_4:53240270-53240289 | None:intergenic | 40.0% |
| ATCTGATTAGGTCATGGCTT+GGG | + | chr8_4:53240305-53240324 | None:intergenic | 40.0% | |
| TATCTGATTAGGTCATGGCT+TGG | + | chr8_4:53240306-53240325 | None:intergenic | 40.0% | |
| GCATTCACTGCAAGTACATT+TGG | - | chr8_4:53240347-53240366 | Msa1333210:intron | 40.0% | |
| CTAAGAGGCCTTTGTGAATT+AGG | - | chr8_4:53240751-53240770 | Msa1333210:intron | 40.0% | |
| TTTGCTTCTTGAGGAAGAAG+AGG | - | chr8_4:53240812-53240831 | Msa1333210:intron | 40.0% | |
| TTGCTTCTTGAGGAAGAAGA+GGG | - | chr8_4:53240813-53240832 | Msa1333210:intron | 40.0% | |
| ! | ATCTTTTCCGTGCATCCTTT+TGG | - | chr8_4:53241051-53241070 | Msa1333210:intron | 40.0% |
| ! | TCTTTTCCGTGCATCCTTTT+GGG | - | chr8_4:53241052-53241071 | Msa1333210:intron | 40.0% |
| CTTCAAGGTAGAAGCAGTTT+GGG | + | chr8_4:53241348-53241367 | None:intergenic | 40.0% | |
| CAAACTGCTTCTACCTTGAA+GGG | - | chr8_4:53241347-53241366 | Msa1333210:intron | 40.0% | |
| ! | AATCTCCTTAACAAGTTGGG+AGG | + | chr8_4:53241529-53241548 | None:intergenic | 40.0% |
| !! | TCCCAACTTGTTAAGGAGAT+TGG | - | chr8_4:53241528-53241547 | Msa1333210:intron | 40.0% |
| TGTTAAGGAGATTGGTAGAC+AGG | - | chr8_4:53241536-53241555 | Msa1333210:intron | 40.0% | |
| ACTTAGTTCCATGACAGGTT+TGG | + | chr8_4:53241603-53241622 | None:intergenic | 40.0% | |
| TCTGTAGCAACCTGATAACA+GGG | + | chr8_4:53241635-53241654 | None:intergenic | 40.0% | |
| GATTGCCATTATTGTCGTGA+AGG | - | chr8_4:53241697-53241716 | Msa1333210:intron | 40.0% | |
| GCAATCACTATTCACTAGCA+CGG | + | chr8_4:53241904-53241923 | None:intergenic | 40.0% | |
| ATTAGAGGATTGCTTTCTGG+AGG | - | chr8_4:53242209-53242228 | Msa1333210:CDS | 40.0% | |
| CACATCAAAAAATAGGGGAG+GGG | + | chr8_4:53242453-53242472 | None:intergenic | 40.0% | |
| ACAGCACGACACAAACACAA+CGG | + | chr8_4:53237283-53237302 | None:intergenic | 45.0% | |
| !! | GATGAGAGAGGAAGCATTAG+TGG | + | chr8_4:53237425-53237444 | None:intergenic | 45.0% |
| !! | CATCTTCAAGTTGGAAGCCA+TGG | + | chr8_4:53237533-53237552 | None:intergenic | 45.0% |
| TGATGAAGATGCATACGCGA+GGG | + | chr8_4:53237605-53237624 | None:intergenic | 45.0% | |
| ATGATGAAGATGCATACGCG+AGG | + | chr8_4:53237606-53237625 | None:intergenic | 45.0% | |
| ! | AGCAACCACCAAAGTACTTG+GGG | - | chr8_4:53238040-53238059 | Msa1333210:intron | 45.0% |
| GTTCTTTCCCCCAAGTACTT+TGG | + | chr8_4:53238051-53238070 | None:intergenic | 45.0% | |
| ! | GAGGGAGTACGTAAGATGTT+TGG | + | chr8_4:53238073-53238092 | None:intergenic | 45.0% |
| AGTCTCACATCGAGTGGTAT+GGG | + | chr8_4:53238102-53238121 | None:intergenic | 45.0% | |
| AAGTCTCACATCGAGTGGTA+TGG | + | chr8_4:53238103-53238122 | None:intergenic | 45.0% | |
| TACCACTCGATGTGAGACTT+AGG | - | chr8_4:53238103-53238122 | Msa1333210:CDS | 45.0% | |
| GCATCCCATACTACTTGATG+TGG | - | chr8_4:53238295-53238314 | Msa1333210:CDS | 45.0% | |
| AGGGCATGGTTGGGTATTAT+GGG | + | chr8_4:53238334-53238353 | None:intergenic | 45.0% | |
| TAGGGCATGGTTGGGTATTA+TGG | + | chr8_4:53238335-53238354 | None:intergenic | 45.0% | |
| AGAAGTGATAGGGCATGGTT+GGG | + | chr8_4:53238343-53238362 | None:intergenic | 45.0% | |
| AAGAAGTGATAGGGCATGGT+TGG | + | chr8_4:53238344-53238363 | None:intergenic | 45.0% | |
| ! | TAGACAAAGTACTCAGCTGG+AGG | - | chr8_4:53238575-53238594 | Msa1333210:CDS | 45.0% |
| GAAAAACTAAAGGGGCAGCA+GGG | + | chr8_4:53238816-53238835 | None:intergenic | 45.0% | |
| TGAAAAACTAAAGGGGCAGC+AGG | + | chr8_4:53238817-53238836 | None:intergenic | 45.0% | |
| AAAGCTGAACATGCCTCCTA+CGG | + | chr8_4:53239797-53239816 | None:intergenic | 45.0% | |
| ! | GAACTTTTTGACATGGGAGC+TGG | - | chr8_4:53239982-53240001 | Msa1333210:intron | 45.0% |
| TTTGGGGGGATAAGAAAAGG+GGG | + | chr8_4:53240133-53240152 | None:intergenic | 45.0% | |
| GTTTGGGGGGATAAGAAAAG+GGG | + | chr8_4:53240134-53240153 | None:intergenic | 45.0% | |
| GGTTTGGGGGGATAAGAAAA+GGG | + | chr8_4:53240135-53240154 | None:intergenic | 45.0% | |
| ! | TGGTTTGGGGGGATAAGAAA+AGG | + | chr8_4:53240136-53240155 | None:intergenic | 45.0% |
| ! | AGGTTCGGGATTGATGGTTT+GGG | + | chr8_4:53240150-53240169 | None:intergenic | 45.0% |
| ! | AAGGTTCGGGATTGATGGTT+TGG | + | chr8_4:53240151-53240170 | None:intergenic | 45.0% |
| CGGCCAGAATATTCGGATAT+AGG | - | chr8_4:53240184-53240203 | Msa1333210:intron | 45.0% | |
| CCCCCTATATCCGAATATTC+TGG | + | chr8_4:53240190-53240209 | None:intergenic | 45.0% | |
| ! | TACGCGTTTTACGCTCTGAT+CGG | - | chr8_4:53240213-53240232 | Msa1333210:intron | 45.0% |
| TACGCTCTGATCGGTAACTT+AGG | - | chr8_4:53240222-53240241 | Msa1333210:intron | 45.0% | |
| ACGCTCTGATCGGTAACTTA+GGG | - | chr8_4:53240223-53240242 | Msa1333210:intron | 45.0% | |
| !!! | GGGTGCTATTATAGCCCTTT+TGG | + | chr8_4:53240271-53240290 | None:intergenic | 45.0% |
| AAGGGCTATAATAGCACCCT+TGG | - | chr8_4:53240272-53240291 | Msa1333210:intron | 45.0% | |
| AGGGCTATAATAGCACCCTT+GGG | - | chr8_4:53240273-53240292 | Msa1333210:intron | 45.0% | |
| AACACCCTCTTCTTCCTCAA+AGG | - | chr8_4:53240459-53240478 | Msa1333210:intron | 45.0% | |
| ! | TGCTCCTTTGAGGAAGAAGA+GGG | + | chr8_4:53240466-53240485 | None:intergenic | 45.0% |
| ! | TTGCTCCTTTGAGGAAGAAG+AGG | + | chr8_4:53240467-53240486 | None:intergenic | 45.0% |
| ! | CTTTTCCGTGCATCCTTTTG+GGG | - | chr8_4:53241053-53241072 | Msa1333210:intron | 45.0% |
| CAATGCTGGGATGAAGACAA+TGG | - | chr8_4:53241187-53241206 | Msa1333210:CDS | 45.0% | |
| CCTTCAAGGTAGAAGCAGTT+TGG | + | chr8_4:53241349-53241368 | None:intergenic | 45.0% | |
| CCAAACTGCTTCTACCTTGA+AGG | - | chr8_4:53241346-53241365 | Msa1333210:intron | 45.0% | |
| CAAACTTACTTGGCCCTTCA+AGG | + | chr8_4:53241363-53241382 | None:intergenic | 45.0% | |
| GGACAACTTAGTTCCATGAC+AGG | + | chr8_4:53241608-53241627 | None:intergenic | 45.0% | |
| TTGTCCTTACCCCTGTTATC+AGG | - | chr8_4:53241622-53241641 | Msa1333210:intron | 45.0% | |
| CTGTAGCAACCTGATAACAG+GGG | + | chr8_4:53241634-53241653 | None:intergenic | 45.0% | |
| GTCTGTAGCAACCTGATAAC+AGG | + | chr8_4:53241636-53241655 | None:intergenic | 45.0% | |
| ! | TGAGAAAAGGTGCGAGAACT+TGG | - | chr8_4:53241865-53241884 | Msa1333210:intron | 45.0% |
| GTGCGAGAACTTGGATTTCA+TGG | - | chr8_4:53241874-53241893 | Msa1333210:intron | 45.0% | |
| ACGTACAAAAGCCTCCTTGA+GGG | + | chr8_4:53242094-53242113 | None:intergenic | 45.0% | |
| TACGTACAAAAGCCTCCTTG+AGG | + | chr8_4:53242095-53242114 | None:intergenic | 45.0% | |
| ! | CAAGGAGGCTTTTGTACGTA+CGG | - | chr8_4:53242095-53242114 | Msa1333210:intron | 45.0% |
| CAATTCTAGTCCTGCCAACT+TGG | - | chr8_4:53242164-53242183 | Msa1333210:intron | 45.0% | |
| ! | AGAACAAGAACCAAGTTGGC+AGG | + | chr8_4:53242177-53242196 | None:intergenic | 45.0% |
| CAGAAGTTGGACATGTGCTG+TGG | + | chr8_4:53237256-53237275 | None:intergenic | 50.0% | |
| ACACAACGGAACGCAGAAGT+TGG | + | chr8_4:53237269-53237288 | None:intergenic | 50.0% | |
| AACTCAATCTCCCGCATCCA+TGG | - | chr8_4:53237513-53237532 | Msa1333210:three_prime_UTR | 50.0% | |
| AAGTTGGAAGCCATGGATGC+GGG | + | chr8_4:53237526-53237545 | None:intergenic | 50.0% | |
| ! | CAAGTTGGAAGCCATGGATG+CGG | + | chr8_4:53237527-53237546 | None:intergenic | 50.0% |
| CTGAGGGGTCATCTTCAAGT+TGG | + | chr8_4:53237542-53237561 | None:intergenic | 50.0% | |
| ATGGATCTGTTCGAGCTGAG+GGG | + | chr8_4:53237557-53237576 | None:intergenic | 50.0% | |
| CATGGATCTGTTCGAGCTGA+GGG | + | chr8_4:53237558-53237577 | None:intergenic | 50.0% | |
| CTGGTTGTCACTGCACAACA+AGG | + | chr8_4:53237926-53237945 | None:intergenic | 50.0% | |
| ! | CTTGTTGTGCAGTGACAACC+AGG | - | chr8_4:53237924-53237943 | Msa1333210:intron | 50.0% |
| ! | GCAACCACCAAAGTACTTGG+GGG | - | chr8_4:53238041-53238060 | Msa1333210:intron | 50.0% |
| CTTTCCCCCAAGTACTTTGG+TGG | + | chr8_4:53238048-53238067 | None:intergenic | 50.0% | |
| GAGTGGTATGGGATGCTTGA+GGG | + | chr8_4:53238091-53238110 | None:intergenic | 50.0% | |
| !!! | GTTTTGGAGAAGACCACCGA+CGG | + | chr8_4:53238201-53238220 | None:intergenic | 50.0% |
| !! | AACGCTGGTTGTCGGTGTTT+TGG | + | chr8_4:53238217-53238236 | None:intergenic | 50.0% |
| GGGATTGTTCCCCAAGTACT+TGG | + | chr8_4:53238259-53238278 | None:intergenic | 50.0% | |
| GCATGGTTGGGTATTATGGG+GGG | + | chr8_4:53238331-53238350 | None:intergenic | 50.0% | |
| GGCATGGTTGGGTATTATGG+GGG | + | chr8_4:53238332-53238351 | None:intergenic | 50.0% | |
| GGGCATGGTTGGGTATTATG+GGG | + | chr8_4:53238333-53238352 | None:intergenic | 50.0% | |
| CAGAAATGGCTTCCAGAAGC+TGG | - | chr8_4:53238533-53238552 | Msa1333210:intron | 50.0% | |
| TTTGCAGTCCCTCATCTTCC+CGG | + | chr8_4:53238607-53238626 | None:intergenic | 50.0% | |
| GGAAGATGAGGGACTGCAAA+AGG | - | chr8_4:53238607-53238626 | Msa1333210:CDS | 50.0% | |
| TGGCAAGATTCGACTCAGCA+GGG | + | chr8_4:53238790-53238809 | None:intergenic | 50.0% | |
| ACATCTCATGCCAACCTTCC+AGG | - | chr8_4:53238876-53238895 | Msa1333210:intron | 50.0% | |
| TATAGAGCGGGGTTGCATGT+TGG | + | chr8_4:53238955-53238974 | None:intergenic | 50.0% | |
| GAACATGCCTCCTACGGAAT+TGG | + | chr8_4:53239791-53239810 | None:intergenic | 50.0% | |
| GCAAGTGAATCTACAGCCGA+AGG | - | chr8_4:53240006-53240025 | Msa1333210:intron | 50.0% | |
| TTGGGGGGATAAGAAAAGGG+GGG | + | chr8_4:53240132-53240151 | None:intergenic | 50.0% | |
| ! | TTCGGGATTGATGGTTTGGG+GGG | + | chr8_4:53240147-53240166 | None:intergenic | 50.0% |
| ! | GTTCGGGATTGATGGTTTGG+GGG | + | chr8_4:53240148-53240167 | None:intergenic | 50.0% |
| ! | GGTTCGGGATTGATGGTTTG+GGG | + | chr8_4:53240149-53240168 | None:intergenic | 50.0% |
| ACCATCAATCCCGAACCTTG+AGG | - | chr8_4:53240152-53240171 | Msa1333210:intron | 50.0% | |
| TGGCCGAATATTTGGCCTCA+AGG | + | chr8_4:53240170-53240189 | None:intergenic | 50.0% | |
| GCGTGGAAGAATGCCCAAAA+GGG | - | chr8_4:53240254-53240273 | Msa1333210:intron | 50.0% | |
| ! | TGGCTTGGGAATGATCCCAA+GGG | + | chr8_4:53240291-53240310 | None:intergenic | 50.0% |
| ! | ATGGCTTGGGAATGATCCCA+AGG | + | chr8_4:53240292-53240311 | None:intergenic | 50.0% |
| TCATCCCAAAATCCCACGGT+GGG | + | chr8_4:53240375-53240394 | None:intergenic | 50.0% | |
| TTCATCCCAAAATCCCACGG+TGG | + | chr8_4:53240376-53240395 | None:intergenic | 50.0% | |
| !!! | GGGCCTAGGCTATTTTTGTG+TGG | - | chr8_4:53241080-53241099 | Msa1333210:intron | 50.0% |
| GACAATGGATGAGACTGACC+AGG | - | chr8_4:53241202-53241221 | Msa1333210:CDS | 50.0% | |
| AAATGGTGTGGGCGCAATGA+AGG | + | chr8_4:53241269-53241288 | None:intergenic | 50.0% | |
| !! | GAAGGCCTCCCAACTTGTTA+AGG | - | chr8_4:53241521-53241540 | Msa1333210:intron | 50.0% |
| GCAACCTGATAACAGGGGTA+AGG | + | chr8_4:53241629-53241648 | None:intergenic | 50.0% | |
| AAAAGCCTCCTTGAGGGAAC+TGG | + | chr8_4:53242088-53242107 | None:intergenic | 50.0% | |
| ! | AGGCTTTTGTACGTACGGAC+TGG | - | chr8_4:53242100-53242119 | Msa1333210:intron | 50.0% |
| ATTAAGAGACGTGGCACTCG+AGG | + | chr8_4:53242334-53242353 | None:intergenic | 50.0% | |
| CCATGGATCTGTTCGAGCTG+AGG | + | chr8_4:53237559-53237578 | None:intergenic | 55.0% | |
| CCTCAGCTCGAACAGATCCA+TGG | - | chr8_4:53237556-53237575 | Msa1333210:three_prime_UTR | 55.0% | |
| AAGATGCATACGCGAGGGCA+CGG | + | chr8_4:53237600-53237619 | None:intergenic | 55.0% | |
| CGAGTGGTATGGGATGCTTG+AGG | + | chr8_4:53238092-53238111 | None:intergenic | 55.0% | |
| CGCCTAAGTCTCACATCGAG+TGG | + | chr8_4:53238108-53238127 | None:intergenic | 55.0% | |
| ATGTGAGACTTAGGCGTCCC+AGG | - | chr8_4:53238112-53238131 | Msa1333210:CDS | 55.0% | |
| TGTGGGTCAAAACCCTCCGT+CGG | - | chr8_4:53238182-53238201 | Msa1333210:intron | 55.0% | |
| ATGCTCGGCGAAACACTCAG+GGG | + | chr8_4:53238279-53238298 | None:intergenic | 55.0% | |
| GATGCTCGGCGAAACACTCA+GGG | + | chr8_4:53238280-53238299 | None:intergenic | 55.0% | |
| ACTCAGCTGGAGGAACTCAC+CGG | - | chr8_4:53238585-53238604 | Msa1333210:CDS | 55.0% | |
| AGGAACTCACCGGGAAGATG+AGG | - | chr8_4:53238595-53238614 | Msa1333210:CDS | 55.0% | |
| GGAACTCACCGGGAAGATGA+GGG | - | chr8_4:53238596-53238615 | Msa1333210:CDS | 55.0% | |
| CGTCTCTAACCATTGGGCCA+AGG | + | chr8_4:53238750-53238769 | None:intergenic | 55.0% | |
| CTGGCAAGATTCGACTCAGC+AGG | + | chr8_4:53238791-53238810 | None:intergenic | 55.0% | |
| CTGCTGAGTCGAATCTTGCC+AGG | - | chr8_4:53238789-53238808 | Msa1333210:intron | 55.0% | |
| TGCCCTTGCTTAGGGCTAAC+GGG | + | chr8_4:53240088-53240107 | None:intergenic | 55.0% | |
| GTGCCCTTGCTTAGGGCTAA+CGG | + | chr8_4:53240089-53240108 | None:intergenic | 55.0% | |
| GCCTCAAGGTTCGGGATTGA+TGG | + | chr8_4:53240156-53240175 | None:intergenic | 55.0% | |
| AACTTAGGGAGTGAGTCGCG+TGG | - | chr8_4:53240237-53240256 | Msa1333210:intron | 55.0% | |
| CGCGTGGAAGAATGCCCAAA+AGG | - | chr8_4:53240253-53240272 | Msa1333210:intron | 55.0% | |
| CCAGACCCCAAAAGGATGCA+CGG | + | chr8_4:53241061-53241080 | None:intergenic | 55.0% | |
| !!! | CGTGCATCCTTTTGGGGTCT+GGG | - | chr8_4:53241059-53241078 | Msa1333210:intron | 55.0% |
| !!! | GTGCATCCTTTTGGGGTCTG+GGG | - | chr8_4:53241060-53241079 | Msa1333210:intron | 55.0% |
| AGACTTAGGCGTCCCAGGAC+AGG | - | chr8_4:53238117-53238136 | Msa1333210:CDS | 60.0% | |
| TGGAGAAGACCACCGACGGA+GGG | + | chr8_4:53238197-53238216 | None:intergenic | 60.0% | |
| TTGGAGAAGACCACCGACGG+AGG | + | chr8_4:53238198-53238217 | None:intergenic | 60.0% | |
| GGATGCTCGGCGAAACACTC+AGG | + | chr8_4:53238281-53238300 | None:intergenic | 60.0% | |
| CTCAGCTGGAGGAACTCACC+GGG | - | chr8_4:53238586-53238605 | Msa1333210:CDS | 60.0% | |
| CAAGAGGAGCCTTGGCCCAA+TGG | - | chr8_4:53238738-53238757 | Msa1333210:intron | 60.0% | |
| GGCCCGTTAGCCCTAAGCAA+GGG | - | chr8_4:53240083-53240102 | Msa1333210:intron | 60.0% | |
| !! | CATGGGGGTGCCCTTGCTTA+GGG | + | chr8_4:53240096-53240115 | None:intergenic | 60.0% |
| !! | TCATGGGGGTGCCCTTGCTT+AGG | + | chr8_4:53240097-53240116 | None:intergenic | 60.0% |
| ! | AGGGCACCCCCATGACAGAA+TGG | - | chr8_4:53240102-53240121 | Msa1333210:intron | 60.0% |
| GGGCACCCCCATGACAGAAT+GGG | - | chr8_4:53240103-53240122 | Msa1333210:CDS | 60.0% | |
| GGCACCCCCATGACAGAATG+GGG | - | chr8_4:53240104-53240123 | Msa1333210:CDS | 60.0% | |
| AGTACATTTGGCGCCCACCG+TGG | - | chr8_4:53240359-53240378 | Msa1333210:intron | 60.0% | |
| GTACATTTGGCGCCCACCGT+GGG | - | chr8_4:53240360-53240379 | Msa1333210:intron | 60.0% | |
| !!! | CCGTGCATCCTTTTGGGGTC+TGG | - | chr8_4:53241058-53241077 | Msa1333210:intron | 60.0% |
| AGCCTCCTTGAGGGAACTGG+AGG | + | chr8_4:53242085-53242104 | None:intergenic | 60.0% | |
| GGACTCGGGCATCCTGTCCT+GGG | + | chr8_4:53238132-53238151 | None:intergenic | 65.0% | |
| GGGTCAAAACCCTCCGTCGG+TGG | - | chr8_4:53238185-53238204 | Msa1333210:intron | 65.0% | |
| CTAAAGGGGCAGCAGGGTCC+TGG | + | chr8_4:53238810-53238829 | None:intergenic | 65.0% | |
| GGGCCCGTTAGCCCTAAGCA+AGG | - | chr8_4:53240082-53240101 | Msa1333210:intron | 65.0% | |
| GGCGCCCCATTCTGTCATGG+GGG | + | chr8_4:53240111-53240130 | None:intergenic | 65.0% | |
| GGGCGCCCCATTCTGTCATG+GGG | + | chr8_4:53240112-53240131 | None:intergenic | 65.0% | |
| ! | GGGGCGCCCCATTCTGTCAT+GGG | + | chr8_4:53240113-53240132 | None:intergenic | 65.0% |
| ! | TGGCGCCCACCGTGGGATTT+TGG | - | chr8_4:53240367-53240386 | Msa1333210:intron | 65.0% |
| ! | GGCGCCCACCGTGGGATTTT+GGG | - | chr8_4:53240368-53240387 | Msa1333210:intron | 65.0% |
| CCTAGGCCCCAGACCCCAAA+AGG | + | chr8_4:53241069-53241088 | None:intergenic | 65.0% | |
| !!! | CCTTTTGGGGTCTGGGGCCT+AGG | - | chr8_4:53241066-53241085 | Msa1333210:intron | 65.0% |
| !! | GGAACTGGAGGCGCCAATCC+TGG | + | chr8_4:53242073-53242092 | None:intergenic | 65.0% |
| TGGCGCCTCCAGTTCCCTCA+AGG | - | chr8_4:53242077-53242096 | Msa1333210:intron | 65.0% | |
| CGCCTCCAGTTCCCTCAAGG+AGG | - | chr8_4:53242080-53242099 | Msa1333210:intron | 65.0% | |
| GGGACTCGGGCATCCTGTCC+TGG | + | chr8_4:53238133-53238152 | None:intergenic | 70.0% | |
| !! | GGGGGCGCCCCATTCTGTCA+TGG | + | chr8_4:53240114-53240133 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 53237234 | 53242572 | 53237234 | ID=Msa1333210;Name=Msa1333210 |
| chr8_4 | mRNA | 53237234 | 53242572 | 53237234 | ID=Msa1333210-mRNA-1;Parent=Msa1333210;Name=Msa1333210-mRNA-1;_AED=0.13;_eAED=0.13;_QI=275|1|1|1|0.9|0.81|11|434|269 |
| chr8_4 | exon | 53237234 | 53237772 | 53237234 | ID=Msa1333210-mRNA-1:exon:16293;Parent=Msa1333210-mRNA-1 |
| chr8_4 | exon | 53238088 | 53238162 | 53238088 | ID=Msa1333210-mRNA-1:exon:16292;Parent=Msa1333210-mRNA-1 |
| chr8_4 | exon | 53238249 | 53238341 | 53238249 | ID=Msa1333210-mRNA-1:exon:16291;Parent=Msa1333210-mRNA-1 |
| chr8_4 | exon | 53238433 | 53238489 | 53238433 | ID=Msa1333210-mRNA-1:exon:16290;Parent=Msa1333210-mRNA-1 |
| chr8_4 | exon | 53238562 | 53238641 | 53238562 | ID=Msa1333210-mRNA-1:exon:16289;Parent=Msa1333210-mRNA-1 |
| chr8_4 | exon | 53239758 | 53239855 | 53239758 | ID=Msa1333210-mRNA-1:exon:16288;Parent=Msa1333210-mRNA-1 |
| chr8_4 | exon | 53240103 | 53240140 | 53240103 | ID=Msa1333210-mRNA-1:exon:16287;Parent=Msa1333210-mRNA-1 |
| chr8_4 | exon | 53240502 | 53240595 | 53240502 | ID=Msa1333210-mRNA-1:exon:16286;Parent=Msa1333210-mRNA-1 |
| chr8_4 | exon | 53241178 | 53241270 | 53241178 | ID=Msa1333210-mRNA-1:exon:16285;Parent=Msa1333210-mRNA-1 |
| chr8_4 | exon | 53242198 | 53242375 | 53242198 | ID=Msa1333210-mRNA-1:exon:16284;Parent=Msa1333210-mRNA-1 |
| chr8_4 | exon | 53242399 | 53242572 | 53242399 | ID=Msa1333210-mRNA-1:exon:16283;Parent=Msa1333210-mRNA-1 |
| chr8_4 | five_prime_UTR | 53242399 | 53242572 | 53242399 | ID=Msa1333210-mRNA-1:five_prime_utr;Parent=Msa1333210-mRNA-1 |
| chr8_4 | five_prime_UTR | 53242275 | 53242375 | 53242275 | ID=Msa1333210-mRNA-1:five_prime_utr;Parent=Msa1333210-mRNA-1 |
| chr8_4 | CDS | 53242198 | 53242274 | 53242198 | ID=Msa1333210-mRNA-1:cds;Parent=Msa1333210-mRNA-1 |
| chr8_4 | CDS | 53241178 | 53241270 | 53241178 | ID=Msa1333210-mRNA-1:cds;Parent=Msa1333210-mRNA-1 |
| chr8_4 | CDS | 53240502 | 53240595 | 53240502 | ID=Msa1333210-mRNA-1:cds;Parent=Msa1333210-mRNA-1 |
| chr8_4 | CDS | 53240103 | 53240140 | 53240103 | ID=Msa1333210-mRNA-1:cds;Parent=Msa1333210-mRNA-1 |
| chr8_4 | CDS | 53239758 | 53239855 | 53239758 | ID=Msa1333210-mRNA-1:cds;Parent=Msa1333210-mRNA-1 |
| chr8_4 | CDS | 53238562 | 53238641 | 53238562 | ID=Msa1333210-mRNA-1:cds;Parent=Msa1333210-mRNA-1 |
| chr8_4 | CDS | 53238433 | 53238489 | 53238433 | ID=Msa1333210-mRNA-1:cds;Parent=Msa1333210-mRNA-1 |
| chr8_4 | CDS | 53238249 | 53238341 | 53238249 | ID=Msa1333210-mRNA-1:cds;Parent=Msa1333210-mRNA-1 |
| chr8_4 | CDS | 53238088 | 53238162 | 53238088 | ID=Msa1333210-mRNA-1:cds;Parent=Msa1333210-mRNA-1 |
| chr8_4 | CDS | 53237668 | 53237772 | 53237668 | ID=Msa1333210-mRNA-1:cds;Parent=Msa1333210-mRNA-1 |
| chr8_4 | three_prime_UTR | 53237234 | 53237667 | 53237234 | ID=Msa1333210-mRNA-1:three_prime_utr;Parent=Msa1333210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
