Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519850 | XP_013461821.1 | 96.929 | 521 | 14 | 1 | 1 | 521 | 1 | 519 | 0.0 | 1030 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519850 | sp|O48651|SQE1_PANGI | 77.649 | 519 | 112 | 1 | 1 | 519 | 23 | 537 | 0.0 | 825 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519850 | Q8GSM8 | 96.929 | 521 | 14 | 1 | 1 | 521 | 1 | 519 | 0.0 | 1030 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0476080 | Msa0519850 | 0.985312 | 3.540965e-163 | -8.615850e-47 |
| Msa0519770 | Msa0519850 | 0.970971 | 1.959390e-132 | -8.615850e-47 |
| Msa0519850 | Msa1369930 | 0.813523 | 2.451380e-51 | -8.615850e-47 |
| Msa0519850 | Msa1466790 | 0.921114 | 5.416953e-88 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519850 | MtrunA17_Chr3g0135201 | 96.929 | 521 | 14 | 1 | 1 | 521 | 1 | 519 | 0.0 | 1030 |
| Msa0519850 | MtrunA17_Chr1g0152061 | 82.759 | 522 | 86 | 1 | 2 | 519 | 1 | 522 | 0.0 | 874 |
| Msa0519850 | MtrunA17_Chr4g0049291 | 79.264 | 516 | 102 | 3 | 8 | 519 | 9 | 523 | 0.0 | 813 |
| Msa0519850 | MtrunA17_Chr6g0463581 | 77.041 | 196 | 45 | 0 | 323 | 518 | 1 | 196 | 1.14e-105 | 314 |
| Msa0519850 | MtrunA17_Chr6g0463781 | 74.054 | 185 | 48 | 0 | 303 | 487 | 21 | 205 | 1.88e-96 | 291 |
| Msa0519850 | MtrunA17_Chr6g0463601 | 63.529 | 170 | 59 | 2 | 10 | 176 | 12 | 181 | 2.83e-69 | 220 |
| Msa0519850 | MtrunA17_Chr6g0463751 | 74.747 | 99 | 25 | 0 | 78 | 176 | 38 | 136 | 8.01e-51 | 170 |
| Msa0519850 | MtrunA17_Chr5g0411591 | 80.952 | 84 | 16 | 0 | 396 | 479 | 35 | 118 | 4.49e-41 | 144 |
| Msa0519850 | MtrunA17_Chr7g0240231 | 77.381 | 84 | 19 | 0 | 394 | 477 | 33 | 116 | 1.84e-37 | 134 |
| Msa0519850 | MtrunA17_Chr6g0463771 | 73.563 | 87 | 22 | 1 | 229 | 314 | 11 | 97 | 3.17e-36 | 131 |
| Msa0519850 | MtrunA17_Chr6g0463591 | 80.263 | 76 | 14 | 1 | 229 | 303 | 5 | 80 | 4.26e-35 | 126 |
| Msa0519850 | MtrunA17_Chr6g0463761 | 74.138 | 58 | 15 | 0 | 173 | 230 | 24 | 81 | 2.72e-23 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519850 | AT1G58440.1 | 76.436 | 505 | 115 | 2 | 17 | 519 | 21 | 523 | 0.0 | 801 |
| Msa0519850 | AT4G37760.1 | 76.031 | 509 | 116 | 3 | 12 | 517 | 10 | 515 | 0.0 | 769 |
| Msa0519850 | AT2G22830.1 | 74.314 | 510 | 122 | 2 | 17 | 519 | 78 | 585 | 0.0 | 764 |
| Msa0519850 | AT5G24150.1 | 52.229 | 471 | 222 | 2 | 54 | 521 | 43 | 513 | 2.61e-179 | 514 |
| Msa0519850 | AT5G24160.1 | 47.002 | 517 | 259 | 4 | 9 | 521 | 9 | 514 | 6.77e-173 | 498 |
| Msa0519850 | AT5G24150.2 | 53.333 | 435 | 200 | 2 | 54 | 485 | 43 | 477 | 9.89e-169 | 486 |
| Msa0519850 | AT5G24140.1 | 47.908 | 478 | 241 | 4 | 44 | 516 | 36 | 510 | 5.36e-160 | 465 |
| Msa0519850 | AT5G24160.3 | 48.284 | 437 | 222 | 3 | 89 | 521 | 1 | 437 | 3.59e-152 | 442 |
| Msa0519850 | AT5G24160.2 | 47.179 | 390 | 191 | 4 | 9 | 394 | 9 | 387 | 1.89e-125 | 372 |
| Msa0519850 | AT5G24155.2 | 71.930 | 57 | 16 | 0 | 58 | 114 | 49 | 105 | 7.22e-22 | 91.3 |
| Msa0519850 | AT5G24155.3 | 66.667 | 63 | 21 | 0 | 58 | 120 | 49 | 111 | 1.07e-21 | 90.9 |
| Msa0519850 | AT5G24155.1 | 71.930 | 57 | 16 | 0 | 58 | 114 | 49 | 105 | 1.16e-21 | 90.9 |
Find 169 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACCAGTCTCTTTGCTTTC+AGG | 0.135797 | 3_4:+72186257 | Msa0519850:CDS |
| TCAACAAAAGTTAATGTATT+TGG | 0.167062 | 3_4:-72186814 | None:intergenic |
| GCGAATTTCTGTACTACTTA+TGG | 0.178656 | 3_4:-72185459 | None:intergenic |
| TGCTCCTGCCAACGTATTTA+TGG | 0.226048 | 3_4:-72186138 | None:intergenic |
| ATTGAAACGTAAACATTATA+TGG | 0.228307 | 3_4:+72186689 | Msa0519850:three_prime_UTR |
| TGGTCGACCCCTACGGTTTC+GGG | 0.237985 | 3_4:+72181971 | Msa0519850:CDS |
| GATTCCTTCTGCCTTAATAA+TGG | 0.268227 | 3_4:-72186519 | None:intergenic |
| AATCATCTTGCCCATTATTA+AGG | 0.268603 | 3_4:+72186508 | Msa0519850:CDS |
| GAAGAGAATGGTACAATTAA+AGG | 0.280394 | 3_4:+72184643 | Msa0519850:CDS |
| TTCTTCGCTGTCGCGATATA+TGG | 0.282244 | 3_4:+72186314 | Msa0519850:CDS |
| CGCTGTCTGGTTGATGTTCC+TGG | 0.295098 | 3_4:+72185479 | Msa0519850:CDS |
| TAATAAGCTGGAACAGTTGC+AGG | 0.299507 | 3_4:-72186557 | None:intergenic |
| GGACGGAGGGAGTACATTGC+TGG | 0.318839 | 3_4:+72186858 | Msa0519850:three_prime_UTR |
| CGAATTTCTGTACTACTTAT+GGG | 0.320042 | 3_4:-72185458 | None:intergenic |
| ATTCCGATCCATATGCGTTT+AGG | 0.322929 | 3_4:-72186368 | None:intergenic |
| GCTTTGATTATCTGAGTCTT+GGG | 0.327261 | 3_4:+72186219 | Msa0519850:CDS |
| TTCCGATCCATATGCGTTTA+GGG | 0.328350 | 3_4:-72186367 | None:intergenic |
| ATTTCACCATTGGAAATAGA+TGG | 0.333959 | 3_4:-72185512 | None:intergenic |
| TGCTTTGATTATCTGAGTCT+TGG | 0.344637 | 3_4:+72186218 | Msa0519850:CDS |
| ATTCCTTCTGCCTTAATAAT+GGG | 0.347292 | 3_4:-72186518 | None:intergenic |
| ATCTATTTCCAATGGTGAAA+TGG | 0.351927 | 3_4:+72185514 | Msa0519850:CDS |
| ATGGTCGACCCCTACGGTTT+CGG | 0.353513 | 3_4:+72181970 | Msa0519850:CDS |
| TACCTTACGCAAGGTATAGA+AGG | 0.355066 | 3_4:-72185964 | None:intergenic |
| ATTGATGCTCAGCAAGTGTT+TGG | 0.355900 | 3_4:+72183826 | Msa0519850:CDS |
| AACATGCGCCATCCCCTAAC+CGG | 0.356195 | 3_4:+72185837 | Msa0519850:CDS |
| CCCAAAATATAAGCGAAAAT+TGG | 0.361641 | 3_4:-72186837 | None:intergenic |
| ATGATATCAACGTCGCCGTT+TGG | 0.370779 | 3_4:-72182126 | None:intergenic |
| TTCCTTCCCCTAAACGCATA+TGG | 0.381663 | 3_4:+72186360 | Msa0519850:CDS |
| AAAATGTGAAAACAAAATTC+AGG | 0.386876 | 3_4:-72186902 | None:intergenic |
| CTCCCATCAGAAGGGCTCCC+GGG | 0.391611 | 3_4:-72185806 | None:intergenic |
| AAATCATGGTCACGTCATAC+TGG | 0.391765 | 3_4:+72185409 | Msa0519850:CDS |
| AATAATGGGCAAGATGATTC+CGG | 0.399527 | 3_4:-72186504 | None:intergenic |
| TTGATTGAGCTGGGACTTGA+AGG | 0.413598 | 3_4:+72183635 | Msa0519850:CDS |
| AGGGCTCCCGGGGTGGGATA+AGG | 0.421125 | 3_4:-72185795 | None:intergenic |
| AAAGGCTAGGTGCATCATTC+AGG | 0.421944 | 3_4:-72185926 | None:intergenic |
| TCGGCTGGCATGCTTCTGTT+TGG | 0.423353 | 3_4:-72185771 | None:intergenic |
| AGTGTAAGCGAGAGCGGAGC+CGG | 0.434336 | 3_4:-72182169 | None:intergenic |
| AATGAACCAGACCGAATTGT+TGG | 0.440764 | 3_4:+72183581 | Msa0519850:CDS |
| TCTCCCATCAGAAGGGCTCC+CGG | 0.444941 | 3_4:-72185807 | None:intergenic |
| TTGATGCTCAGCAAGTGTTT+GGG | 0.446101 | 3_4:+72183827 | Msa0519850:CDS |
| AAAACAATGCTAGCTCATCT+TGG | 0.446371 | 3_4:-72186643 | None:intergenic |
| CATCAGAAGGGCTCCCGGGG+TGG | 0.453110 | 3_4:-72185802 | None:intergenic |
| TCCGCTCTCGCTTACACTCT+CGG | 0.457292 | 3_4:+72182174 | Msa0519850:CDS |
| ATACTTTGCCATTTCACCAT+TGG | 0.458675 | 3_4:-72185522 | None:intergenic |
| TAGTACAGAAATTCGCTGTC+TGG | 0.460268 | 3_4:+72185466 | Msa0519850:CDS |
| TAAATACAAATTTATGCAGC+TGG | 0.461053 | 3_4:-72186590 | None:intergenic |
| ATGAAAGCAGCATGAAGCTC+AGG | 0.462032 | 3_4:-72185714 | None:intergenic |
| CTGGAAGAAGCTTTCACAAT+GGG | 0.462566 | 3_4:+72183920 | Msa0519850:CDS |
| ATTGTCGGTGCTGGTGTCGC+CGG | 0.469469 | 3_4:+72182150 | Msa0519850:CDS |
| TGTTTGGCATTGTCCTTATG+TGG | 0.479932 | 3_4:-72185755 | None:intergenic |
| CACCCCGGGAGCCCTTCTGA+TGG | 0.480539 | 3_4:+72185803 | Msa0519850:CDS |
| CTTTGATTATCTGAGTCTTG+GGG | 0.481559 | 3_4:+72186220 | Msa0519850:CDS |
| TATGTTATGTAGTGTACGGT+TGG | 0.482947 | 3_4:+72184594 | Msa0519850:intron |
| AAATTCTTGCAAGACGCAAA+GGG | 0.485245 | 3_4:+72186957 | Msa0519850:three_prime_UTR |
| TCGTTCTCTTTGTAATCCTA+AGG | 0.485652 | 3_4:+72184753 | Msa0519850:CDS |
| GGTTGATGTTCCTGGTCAGA+AGG | 0.486415 | 3_4:+72185487 | Msa0519850:CDS |
| ATCAGAAGGGCTCCCGGGGT+GGG | 0.488056 | 3_4:-72185801 | None:intergenic |
| CACGAGACTCTCTTATCCCT+TGG | 0.490385 | 3_4:+72183876 | Msa0519850:CDS |
| TGTACCATTCTCTTCGAGTA+GGG | 0.493101 | 3_4:-72184635 | None:intergenic |
| GTATTTATGGTGGATGCCAC+TGG | 0.494542 | 3_4:-72186125 | None:intergenic |
| AGCGGTGGTGGTTGTTGCAT+CGG | 0.495786 | 3_4:-72182061 | None:intergenic |
| CTATCTCAAATTGATTGAGC+TGG | 0.497355 | 3_4:+72183625 | Msa0519850:CDS |
| GTAGCAACTCGCCAACAATT+CGG | 0.499442 | 3_4:-72183592 | None:intergenic |
| ACATGCGCCATCCCCTAACC+GGG | 0.501803 | 3_4:+72185838 | Msa0519850:CDS |
| AACTCGCCAACAATTCGGTC+TGG | 0.508143 | 3_4:-72183587 | None:intergenic |
| CCTCTTACCATTGTTTGTGA+TGG | 0.509647 | 3_4:+72184712 | Msa0519850:CDS |
| CTTATGGGATAGAACAGAAC+CGG | 0.511065 | 3_4:-72185443 | None:intergenic |
| GTACAAAATGAAAGATGCTC+AGG | 0.511078 | 3_4:+72184672 | Msa0519850:CDS |
| CCATCACAAACAATGGTAAG+AGG | 0.513886 | 3_4:-72184712 | None:intergenic |
| GCCGATCCTTATCCCACCCC+GGG | 0.514148 | 3_4:+72185789 | Msa0519850:CDS |
| CCAGCGAAGCAGAGAGAGAG+AGG | 0.514178 | 3_4:+72181876 | Msa0519850:five_prime_UTR |
| CTCAAAATGGTCGACCCCTA+CGG | 0.514180 | 3_4:+72181964 | Msa0519850:exon |
| TTGCAGGGAAGAACATTTGA+CGG | 0.515683 | 3_4:-72186541 | None:intergenic |
| TGGTGGTTGTTGCATCGGAA+TGG | 0.516635 | 3_4:-72182056 | None:intergenic |
| TCCACCATAAATACGTTGGC+AGG | 0.517019 | 3_4:+72186134 | Msa0519850:CDS |
| GAAGACAGTGGTAGCTCCAC+AGG | 0.517798 | 3_4:+72185547 | Msa0519850:CDS |
| ATCCATATGCGTTTAGGGGA+AGG | 0.518020 | 3_4:-72186362 | None:intergenic |
| TTGTACCATTCTCTTCGAGT+AGG | 0.520014 | 3_4:-72184636 | None:intergenic |
| GCAAGGTATAGAAGGATTCA+AGG | 0.524109 | 3_4:-72185956 | None:intergenic |
| ACCCCGGGAGCCCTTCTGAT+GGG | 0.525384 | 3_4:+72185804 | Msa0519850:CDS |
| CAGTGGACAAAGGCCACATA+AGG | 0.527014 | 3_4:+72185742 | Msa0519850:CDS |
| TCCCGGGGTGGGATAAGGAT+CGG | 0.530492 | 3_4:-72185790 | None:intergenic |
| GACGTTGATATCATCATTGT+CGG | 0.531291 | 3_4:+72182135 | Msa0519850:CDS |
| ATTAAAAGATCTGCATTCTC+CGG | 0.538231 | 3_4:-72182103 | None:intergenic |
| AGCCGATCCTTATCCCACCC+CGG | 0.538389 | 3_4:+72185788 | Msa0519850:CDS |
| GAAATGAAGAACCAAACTCA+GGG | 0.539815 | 3_4:-72186294 | None:intergenic |
| GATATCATCATTGTCGGTGC+TGG | 0.540205 | 3_4:+72182141 | Msa0519850:CDS |
| GGAGGTGCTCTATAATAAGC+TGG | 0.541029 | 3_4:-72186569 | None:intergenic |
| ATGCGTTTAGGGGAAGGAAA+TGG | 0.541806 | 3_4:-72186356 | None:intergenic |
| TTGCCCATTATTAAGGCAGA+AGG | 0.548504 | 3_4:+72186515 | Msa0519850:CDS |
| ATCCTTCTATACCTTGCGTA+AGG | 0.552810 | 3_4:+72185962 | Msa0519850:CDS |
| GCCGAGAGTGTAAGCGAGAG+CGG | 0.554979 | 3_4:-72182175 | None:intergenic |
| AATCATGGTCACGTCATACT+GGG | 0.555739 | 3_4:+72185410 | Msa0519850:CDS |
| GTGATCCACCCGAAACCGTA+GGG | 0.555940 | 3_4:-72181979 | None:intergenic |
| CAAATTCTTGCAAGACGCAA+AGG | 0.557420 | 3_4:+72186956 | Msa0519850:three_prime_UTR |
| TCCCATCAGAAGGGCTCCCG+GGG | 0.560065 | 3_4:-72185805 | None:intergenic |
| AGAAATGAAGAACCAAACTC+AGG | 0.560990 | 3_4:-72186295 | None:intergenic |
| CATTCAATGTTAGTACATGT+TGG | 0.561288 | 3_4:-72187015 | None:intergenic |
| TATCTCAAATTGATTGAGCT+GGG | 0.564234 | 3_4:+72183626 | Msa0519850:CDS |
| AGATCTGCATTCTCCGGTGG+CGG | 0.564343 | 3_4:-72182097 | None:intergenic |
| AAGTTTCACTCAGATATCGC+TGG | 0.567766 | 3_4:+72183901 | Msa0519850:CDS |
| GGGGTGGGATAAGGATCGGC+TGG | 0.568649 | 3_4:-72185786 | None:intergenic |
| AATCCTGAAAGCAAAGAGAC+TGG | 0.569045 | 3_4:-72186260 | None:intergenic |
| TCCCCTAAACGCATATGGAT+CGG | 0.569073 | 3_4:+72186365 | Msa0519850:CDS |
| GACGGAGGGAGTACATTGCT+GGG | 0.569413 | 3_4:+72186859 | Msa0519850:three_prime_UTR |
| TGCTGCTTTCATAGCTGCAG+TGG | 0.570794 | 3_4:+72185725 | Msa0519850:CDS |
| TGCCACAGTCATCCCACCCC+CGG | 0.571168 | 3_4:-72185856 | None:intergenic |
| AAGGTTCCATCTATTTCCAA+TGG | 0.571490 | 3_4:+72185506 | Msa0519850:CDS |
| GCATCATTCAGGTCAAGTAA+AGG | 0.573325 | 3_4:-72185915 | None:intergenic |
| ATCAATTTGAGATAGCCTCC+AGG | 0.576174 | 3_4:-72183617 | None:intergenic |
| TTCATAGCTGCAGTGGACAA+AGG | 0.578009 | 3_4:+72185732 | Msa0519850:CDS |
| GTTGGCGAGTTGCTACAACC+TGG | 0.579187 | 3_4:+72183599 | Msa0519850:CDS |
| ACTTCCCTACTCGAAGAGAA+TGG | 0.579687 | 3_4:+72184631 | Msa0519850:CDS |
| GTTGGCAGGAGCACTTTACA+AGG | 0.579726 | 3_4:+72186148 | Msa0519850:CDS |
| AACTAAGCCAACAAAACAAG+AGG | 0.581348 | 3_4:-72185360 | None:intergenic |
| AGGATTCAAGGTATTTACAA+AGG | 0.585424 | 3_4:-72185944 | None:intergenic |
| TGAAAGCAGCATGAAGCTCA+GGG | 0.587959 | 3_4:-72185713 | None:intergenic |
| GGATAGAACAGAACCGGTGA+AGG | 0.588623 | 3_4:-72185437 | None:intergenic |
| GAGAACATTACAACCGCCAC+CGG | 0.589265 | 3_4:+72182084 | Msa0519850:CDS |
| TTTGATTATCTGAGTCTTGG+GGG | 0.589666 | 3_4:+72186221 | Msa0519850:CDS |
| GAACTTCCATGTGCAAATCA+TGG | 0.591041 | 3_4:+72185395 | Msa0519850:CDS |
| TCAAGGTATTTACAAAGGCT+AGG | 0.592034 | 3_4:-72185939 | None:intergenic |
| GCTGTCGCGATATATGGTGT+TGG | 0.596308 | 3_4:+72186320 | Msa0519850:CDS |
| TGTTATTATTGCAGATTGTG+TGG | 0.599886 | 3_4:+72183798 | Msa0519850:intron |
| CAGCGAAGCAGAGAGAGAGA+GGG | 0.600367 | 3_4:+72181877 | Msa0519850:five_prime_UTR |
| TGAATGCATCTCCCATCAGA+AGG | 0.601414 | 3_4:-72185815 | None:intergenic |
| AAACTCAAAACTCTTTGCGT+CGG | 0.601833 | 3_4:-72181938 | None:intergenic |
| TGTAATGTTCTCAGCGGTGG+TGG | 0.602589 | 3_4:-72182073 | None:intergenic |
| TGTAGTGTACGGTTGGAGCA+AGG | 0.602718 | 3_4:+72184601 | Msa0519850:intron |
| CTTGCAAGACGCAAAGGGGA+CGG | 0.605588 | 3_4:+72186962 | Msa0519850:three_prime_UTR |
| ATTATCTAATGTAGGATGGA+CGG | 0.607031 | 3_4:+72183531 | Msa0519850:intron |
| TCTCGCTTACACTCTCGGCA+AGG | 0.608886 | 3_4:+72182179 | Msa0519850:CDS |
| GAAACAACCATCACAAACAA+TGG | 0.613084 | 3_4:-72184719 | None:intergenic |
| TGTGATCCACCCGAAACCGT+AGG | 0.613578 | 3_4:-72181980 | None:intergenic |
| AATAAGCTGGAACAGTTGCA+GGG | 0.614063 | 3_4:-72186556 | None:intergenic |
| GAGTGCAGCGAGAGTGCTGA+GGG | 0.617656 | 3_4:-72182007 | None:intergenic |
| TTAAGGAATTACCTTACGCA+AGG | 0.617927 | 3_4:-72185973 | None:intergenic |
| GACGGAGGGAGTACTTGGGA+AGG | 0.618544 | 3_4:-72183978 | None:intergenic |
| TCCGATCCATATGCGTTTAG+GGG | 0.629892 | 3_4:-72186366 | None:intergenic |
| ATAGATGGAACCTTCTGACC+AGG | 0.631618 | 3_4:-72185497 | None:intergenic |
| TCTAATGTAGGATGGACGGC+GGG | 0.636695 | 3_4:+72183535 | Msa0519850:intron |
| GAATGCATCTCCCATCAGAA+GGG | 0.640289 | 3_4:-72185814 | None:intergenic |
| GAATACGTCTTTAAAAGTCA+AGG | 0.643454 | 3_4:+72186615 | Msa0519850:three_prime_UTR |
| GGCATCCACCATAAATACGT+TGG | 0.644019 | 3_4:+72186130 | Msa0519850:CDS |
| ATCTAATGTAGGATGGACGG+CGG | 0.644873 | 3_4:+72183534 | Msa0519850:intron |
| ATACAAATTTATGCAGCTGG+AGG | 0.648738 | 3_4:-72186587 | None:intergenic |
| GAGGGAGTACTTGGGAAGGG+AGG | 0.650679 | 3_4:-72183974 | None:intergenic |
| AAAAGATCTGCATTCTCCGG+TGG | 0.650741 | 3_4:-72182100 | None:intergenic |
| GGTTGTAATGTTCTCAGCGG+TGG | 0.651335 | 3_4:-72182076 | None:intergenic |
| ACGGAGGGAGTACTTGGGAA+GGG | 0.655483 | 3_4:-72183977 | None:intergenic |
| TCGACCCCTACGGTTTCGGG+TGG | 0.658583 | 3_4:+72181974 | Msa0519850:CDS |
| AAAGCAGCATGAAGCTCAGG+GGG | 0.659168 | 3_4:-72185711 | None:intergenic |
| CATGCGCCATCCCCTAACCG+GGG | 0.661135 | 3_4:+72185839 | Msa0519850:CDS |
| GGCAAAGTATTTGAAGACAG+TGG | 0.664630 | 3_4:+72185535 | Msa0519850:CDS |
| ACTAAGCCAACAAAACAAGA+GGG | 0.667139 | 3_4:-72185359 | None:intergenic |
| ATGCGCCATCCCCTAACCGG+GGG | 0.670116 | 3_4:+72185840 | Msa0519850:CDS |
| GCGTCGGAGAGAGAAGATGA+CGG | 0.670819 | 3_4:-72181922 | None:intergenic |
| TCCTGCCAACGTATTTATGG+TGG | 0.676661 | 3_4:-72186135 | None:intergenic |
| AATTCTTGCAAGACGCAAAG+GGG | 0.677732 | 3_4:+72186958 | Msa0519850:three_prime_UTR |
| CATACTGGGAGATCCTTCAC+CGG | 0.681263 | 3_4:+72185424 | Msa0519850:CDS |
| AGAGTGCAGCGAGAGTGCTG+AGG | 0.682039 | 3_4:-72182008 | None:intergenic |
| AATGAAGAACCAAACTCAGG+GGG | 0.690809 | 3_4:-72186292 | None:intergenic |
| GGCGAGTTGCTACAACCTGG+AGG | 0.693043 | 3_4:+72183602 | Msa0519850:CDS |
| GCTGGAAGAAGCTTTCACAA+TGG | 0.694395 | 3_4:+72183919 | Msa0519850:CDS |
| GGCGGTTGTAATGTTCTCAG+CGG | 0.696843 | 3_4:-72182079 | None:intergenic |
| GAAAGCAGCATGAAGCTCAG+GGG | 0.705422 | 3_4:-72185712 | None:intergenic |
| TGATCCACCCGAAACCGTAG+GGG | 0.715386 | 3_4:-72181978 | None:intergenic |
| ACGTGACCATGATTTGCACA+TGG | 0.721204 | 3_4:-72185401 | None:intergenic |
| AAATGAAGAACCAAACTCAG+GGG | 0.723277 | 3_4:-72186293 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCTATATATTAATAAGT+TGG | + | chr3_4:72182897-72182916 | Msa0519850:intron | 10.0% |
| !! | ATAAAAGAAAAATAAAACAA+TGG | - | chr3_4:72185312-72185331 | None:intergenic | 10.0% |
| !! | ATTCAAAAGAAAAAAAATTA+AGG | - | chr3_4:72186020-72186039 | None:intergenic | 10.0% |
| !!! | TTTTTTTCTTTTGAATTAAA+AGG | + | chr3_4:72186024-72186043 | Msa0519850:intron | 10.0% |
| !!! | ATTTTATTTGAATAAATTGT+TGG | + | chr3_4:72186433-72186452 | Msa0519850:intron | 10.0% |
| !! | TAAACAAATGTTAATATGAA+TGG | - | chr3_4:72182241-72182260 | None:intergenic | 15.0% |
| !!! | TAACTTTCAAATTTCTATTT+TGG | + | chr3_4:72182513-72182532 | Msa0519850:intron | 15.0% |
| !! | CCAAAATATAATACTTAAAA+TGG | - | chr3_4:72182570-72182589 | None:intergenic | 15.0% |
| !!! | CCATTTTAAGTATTATATTT+TGG | + | chr3_4:72182567-72182586 | Msa0519850:intron | 15.0% |
| !! | TAAAATAATTGTAATTGTAG+CGG | + | chr3_4:72182661-72182680 | Msa0519850:intron | 15.0% |
| !! | TTAATATTTGAACTGTAAAT+AGG | - | chr3_4:72183026-72183045 | None:intergenic | 15.0% |
| !! | ATTTACAGTTCAAATATTAA+TGG | + | chr3_4:72183026-72183045 | Msa0519850:intron | 15.0% |
| !!! | GATTTTTTTGCTTATAATTT+AGG | - | chr3_4:72184003-72184022 | None:intergenic | 15.0% |
| !!! | TTTTGAAATAACATAAAAGT+TGG | - | chr3_4:72184061-72184080 | None:intergenic | 15.0% |
| !!! | ATTTGCATTTAATTTTACTT+TGG | - | chr3_4:72184096-72184115 | None:intergenic | 15.0% |
| !!! | ATAATTTTTTGTGTTTTTCT+TGG | - | chr3_4:72184203-72184222 | None:intergenic | 15.0% |
| !! | AACTTTATATCAGAAAAAAA+CGG | - | chr3_4:72184330-72184349 | None:intergenic | 15.0% |
| !!! | TTATGAATTTTGAATGGAAT+GGG | + | chr3_4:72182413-72182432 | Msa0519850:intron | 20.0% |
| !! | AATTAAGGGATATTTATACA+GGG | - | chr3_4:72183246-72183265 | None:intergenic | 20.0% |
| !!! | TAGTTTTCCATATTCATTTT+AGG | + | chr3_4:72183291-72183310 | Msa0519850:intron | 20.0% |
| !!! | AGTTTTCCATATTCATTTTA+GGG | + | chr3_4:72183292-72183311 | Msa0519850:intron | 20.0% |
| !!! | TTTTTGCTTATAATTTAGGA+CGG | - | chr3_4:72183999-72184018 | None:intergenic | 20.0% |
| !!! | GTCTTTTTTGCTTATATTTT+GGG | - | chr3_4:72184039-72184058 | None:intergenic | 20.0% |
| !!! | TTCTTATTGGTTAATGATTA+TGG | - | chr3_4:72184150-72184169 | None:intergenic | 20.0% |
| !! | GATGTAAAAACAATTCTTAT+TGG | - | chr3_4:72184163-72184182 | None:intergenic | 20.0% |
| !!! | TGTGTTTTTTGCTTATAAAT+TGG | + | chr3_4:72184266-72184285 | Msa0519850:intron | 20.0% |
| !!! | GTGTTTTTTGCTTATAAATT+GGG | + | chr3_4:72184267-72184286 | Msa0519850:intron | 20.0% |
| !! | TTTATTATAATCAATGACCT+TGG | - | chr3_4:72184433-72184452 | None:intergenic | 20.0% |
| !!! | TTTTTATGTTATGTAGTGTA+CGG | + | chr3_4:72184590-72184609 | Msa0519850:intron | 20.0% |
| !! | AATAATAGACAAAATAGGAT+TGG | + | chr3_4:72184871-72184890 | Msa0519850:intron | 20.0% |
| !! | ATAATAGACAAAATAGGATT+GGG | + | chr3_4:72184872-72184891 | Msa0519850:intron | 20.0% |
| !! | TGTGAAATCATTTAATCTTA+TGG | - | chr3_4:72185198-72185217 | None:intergenic | 20.0% |
| !!! | ACAAGTACAAATTGTTTTTT+AGG | + | chr3_4:72185590-72185609 | Msa0519850:intron | 20.0% |
| !! | AAAAAATTAAGGTGAAGAAT+TGG | - | chr3_4:72186009-72186028 | None:intergenic | 20.0% |
| !! | ATTGAAACGTAAACATTATA+TGG | + | chr3_4:72186689-72186708 | Msa0519850:three_prime_UTR | 20.0% |
| !!! | CTTTTAAGTTTGATTCTTTA+TGG | + | chr3_4:72186712-72186731 | Msa0519850:three_prime_UTR | 20.0% |
| !! | TCAACAAAAGTTAATGTATT+TGG | - | chr3_4:72186817-72186836 | None:intergenic | 20.0% |
| !! | AAAATGTGAAAACAAAATTC+AGG | - | chr3_4:72186905-72186924 | None:intergenic | 20.0% |
| ! | AATTACGAAGAAATAGGAAT+GGG | - | chr3_4:72182214-72182233 | None:intergenic | 25.0% |
| ! | AAATTACGAAGAAATAGGAA+TGG | - | chr3_4:72182215-72182234 | None:intergenic | 25.0% |
| ! | ACAAATGTTAATATGAATGG+TGG | - | chr3_4:72182238-72182257 | None:intergenic | 25.0% |
| !! | AAATTACTGTGTTTTGTATC+TGG | + | chr3_4:72182283-72182302 | Msa0519850:intron | 25.0% |
| !! | TACCAGTTATGAATTTTGAA+TGG | + | chr3_4:72182407-72182426 | Msa0519850:intron | 25.0% |
| ! | TTCCATTCAAAATTCATAAC+TGG | - | chr3_4:72182412-72182431 | None:intergenic | 25.0% |
| !! | GTTATGAATTTTGAATGGAA+TGG | + | chr3_4:72182412-72182431 | Msa0519850:intron | 25.0% |
| !! | TATGAATTTTGAATGGAATG+GGG | + | chr3_4:72182414-72182433 | Msa0519850:intron | 25.0% |
| ! | TTAGAAATGACAACATTAGA+TGG | + | chr3_4:72182732-72182751 | Msa0519850:intron | 25.0% |
| !! | AGACATATAGATTTTGTGTA+AGG | + | chr3_4:72182793-72182812 | Msa0519850:intron | 25.0% |
| !!! | AGTTAGTTTTAGTTAGTTTG+AGG | + | chr3_4:72183162-72183181 | Msa0519850:intron | 25.0% |
| ! | CAATTAAGGGATATTTATAC+AGG | - | chr3_4:72183247-72183266 | None:intergenic | 25.0% |
| ! | CTGTATAAATATCCCTTAAT+TGG | + | chr3_4:72183245-72183264 | Msa0519850:intron | 25.0% |
| !! | GTTTTCCATATTCATTTTAG+GGG | + | chr3_4:72183293-72183312 | Msa0519850:intron | 25.0% |
| ! | GCATAACTATTATCTAATGT+AGG | + | chr3_4:72183523-72183542 | Msa0519850:intron | 25.0% |
| ! | AACTATTATCTAATGTAGGA+TGG | + | chr3_4:72183527-72183546 | Msa0519850:intron | 25.0% |
| !! | TGTTCTAAGTGAAGTTAAAA+AGG | - | chr3_4:72183756-72183775 | None:intergenic | 25.0% |
| ! | TAACTTCACTTAGAACAAAA+AGG | + | chr3_4:72183759-72183778 | Msa0519850:intron | 25.0% |
| ! | AACTTCACTTAGAACAAAAA+GGG | + | chr3_4:72183760-72183779 | Msa0519850:intron | 25.0% |
| !!! | GGTCTTTTTTGCTTATATTT+TGG | - | chr3_4:72184040-72184059 | None:intergenic | 25.0% |
| !! | TTTTCTTGGAATAAGTTTCA+TGG | - | chr3_4:72184189-72184208 | None:intergenic | 25.0% |
| ! | AACAAAAACATAGTAGTTTG+AGG | - | chr3_4:72184227-72184246 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATTGGGA+CGG | + | chr3_4:72184271-72184290 | Msa0519850:intron | 25.0% |
| ! | GTGGAAATAATAGACAAAAT+AGG | + | chr3_4:72184866-72184885 | Msa0519850:intron | 25.0% |
| ! | AATTATAGCATTAGAGAGTT+TGG | + | chr3_4:72184895-72184914 | Msa0519850:intron | 25.0% |
| ! | ATTATAGCATTAGAGAGTTT+GGG | + | chr3_4:72184896-72184915 | Msa0519850:intron | 25.0% |
| ! | AGATAGTTGTATATCAACTA+AGG | + | chr3_4:72184937-72184956 | Msa0519850:intron | 25.0% |
| !!! | TATATCAACTAAGGTGTTTT+GGG | + | chr3_4:72184946-72184965 | Msa0519850:intron | 25.0% |
| ! | AAGACTTGAGGTAAATTATA+TGG | + | chr3_4:72185069-72185088 | Msa0519850:intron | 25.0% |
| ! | AACGTTATGATATTCTATCA+TGG | - | chr3_4:72185108-72185127 | None:intergenic | 25.0% |
| !!! | TGGTTGTTTTATGATGTTAT+AGG | + | chr3_4:72185169-72185188 | Msa0519850:intron | 25.0% |
| ! | GTGTAAAGTAATTAAATGCT+AGG | - | chr3_4:72185616-72185635 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTGCAATTAAAGT+GGG | - | chr3_4:72186463-72186482 | None:intergenic | 25.0% |
| !!! | ATTGGTTTTTGCAATTAAAG+TGG | - | chr3_4:72186464-72186483 | None:intergenic | 25.0% |
| ! | TAAATACAAATTTATGCAGC+TGG | - | chr3_4:72186593-72186612 | None:intergenic | 25.0% |
| !! | GTTTTCAGTTAGAAATCTAA+CGG | + | chr3_4:72186661-72186680 | Msa0519850:three_prime_UTR | 25.0% |
| !!! | TTTTTGTTTACATTTTGGGA+CGG | - | chr3_4:72186755-72186774 | None:intergenic | 25.0% |
| !!! | CCGATTTTTGTTTACATTTT+GGG | - | chr3_4:72186759-72186778 | None:intergenic | 25.0% |
| ! | CCCAAAATGTAAACAAAAAT+CGG | + | chr3_4:72186756-72186775 | Msa0519850:three_prime_UTR | 25.0% |
| !!! | ACCGATTTTTGTTTACATTT+TGG | - | chr3_4:72186760-72186779 | None:intergenic | 25.0% |
| !! | ACCAATTTTCGCTTATATTT+TGG | + | chr3_4:72186836-72186855 | Msa0519850:three_prime_UTR | 25.0% |
| !! | CCAATTTTCGCTTATATTTT+GGG | + | chr3_4:72186837-72186856 | Msa0519850:three_prime_UTR | 25.0% |
| !! | TTGTTTTCACATTTTATAGC+TGG | + | chr3_4:72186910-72186929 | Msa0519850:three_prime_UTR | 25.0% |
| !!! | TTTTGAGTTTCCTCTCAAAA+TGG | + | chr3_4:72181951-72181970 | Msa0519850:exon | 30.0% |
| ! | AATGGTTTTTACGAGAGAAA+AGG | - | chr3_4:72182041-72182060 | None:intergenic | 30.0% |
| ATTAAAAGATCTGCATTCTC+CGG | - | chr3_4:72182106-72182125 | None:intergenic | 30.0% | |
| ! | TGCAGATCTTTTAATCCAAA+CGG | + | chr3_4:72182111-72182130 | Msa0519850:CDS | 30.0% |
| AACAGATTTAACCATGGATA+CGG | - | chr3_4:72182338-72182357 | None:intergenic | 30.0% | |
| ATGGTTAAATCTGTTGTTGT+GGG | + | chr3_4:72182343-72182362 | Msa0519850:intron | 30.0% | |
| GTAAGGAGAATTAGATCAAA+TGG | + | chr3_4:72182810-72182829 | Msa0519850:intron | 30.0% | |
| AGTGAAATCAAAAGAGACAA+AGG | + | chr3_4:72182838-72182857 | Msa0519850:intron | 30.0% | |
| CATTGATGAACTCCAATTAA+GGG | - | chr3_4:72183260-72183279 | None:intergenic | 30.0% | |
| TCATTGATGAACTCCAATTA+AGG | - | chr3_4:72183261-72183280 | None:intergenic | 30.0% | |
| ! | GTTTTCCCCTAAAATGAATA+TGG | - | chr3_4:72183301-72183320 | None:intergenic | 30.0% |
| AAAAAGACAGGAAAAAGAAG+AGG | - | chr3_4:72183385-72183404 | None:intergenic | 30.0% | |
| TTAAAAACATCCAACATGTC+AGG | - | chr3_4:72183459-72183478 | None:intergenic | 30.0% | |
| ATTATCTAATGTAGGATGGA+CGG | + | chr3_4:72183531-72183550 | Msa0519850:intron | 30.0% | |
| TATCTCAAATTGATTGAGCT+GGG | + | chr3_4:72183626-72183645 | Msa0519850:CDS | 30.0% | |
| TTTCTTTCACTTCTTGATTC+TGG | + | chr3_4:72183692-72183711 | Msa0519850:intron | 30.0% | |
| TGTTATTATTGCAGATTGTG+TGG | + | chr3_4:72183798-72183817 | Msa0519850:intron | 30.0% | |
| TGATTATGGAGAGAATAGAA+AGG | - | chr3_4:72184136-72184155 | None:intergenic | 30.0% | |
| AAAAACGGAATGTGAAGTAA+AGG | - | chr3_4:72184315-72184334 | None:intergenic | 30.0% | |
| ! | GCTTTTCATTTGACATTGAA+AGG | + | chr3_4:72184407-72184426 | Msa0519850:intron | 30.0% |
| TAACAAGTAACAACTGAAGA+AGG | - | chr3_4:72184556-72184575 | None:intergenic | 30.0% | |
| GAAGAGAATGGTACAATTAA+AGG | + | chr3_4:72184643-72184662 | Msa0519850:CDS | 30.0% | |
| GTTGAAAATTTGATCACCTT+AGG | - | chr3_4:72184772-72184791 | None:intergenic | 30.0% | |
| !! | GTATATCAACTAAGGTGTTT+TGG | + | chr3_4:72184945-72184964 | Msa0519850:intron | 30.0% |
| TGATTTACTATGGGATTTAC+AGG | - | chr3_4:72184987-72185006 | None:intergenic | 30.0% | |
| AAATCCCATAGTAAATCAGA+TGG | + | chr3_4:72184989-72185008 | Msa0519850:intron | 30.0% | |
| ! | ATTTTTCTAGATCTACCTCT+AGG | - | chr3_4:72185029-72185048 | None:intergenic | 30.0% |
| GGTAGATCTAGAAAAATTGT+AGG | + | chr3_4:72185032-72185051 | Msa0519850:intron | 30.0% | |
| TGATTATCAAGAAAGACTTG+AGG | + | chr3_4:72185057-72185076 | Msa0519850:intron | 30.0% | |
| TTATCTAACGGAATAAGACT+TGG | + | chr3_4:72185149-72185168 | Msa0519850:intron | 30.0% | |
| AAAAAAAAACCGACGAGAAT+AGG | - | chr3_4:72185245-72185264 | None:intergenic | 30.0% | |
| ! | TTATTTCTTTCTGTGTTTGC+AGG | + | chr3_4:72185328-72185347 | Msa0519850:intron | 30.0% |
| CGAATTTCTGTACTACTTAT+GGG | - | chr3_4:72185461-72185480 | None:intergenic | 30.0% | |
| ATTTCACCATTGGAAATAGA+TGG | - | chr3_4:72185515-72185534 | None:intergenic | 30.0% | |
| ATCTATTTCCAATGGTGAAA+TGG | + | chr3_4:72185514-72185533 | Msa0519850:CDS | 30.0% | |
| TAAGAGTTAGCTGATGATAA+GGG | + | chr3_4:72185671-72185690 | Msa0519850:intron | 30.0% | |
| GATAAGGGAAAAAAATTTGC+AGG | + | chr3_4:72185686-72185705 | Msa0519850:intron | 30.0% | |
| ! | AGGATTCAAGGTATTTACAA+AGG | - | chr3_4:72185947-72185966 | None:intergenic | 30.0% |
| TAAGGTAATTCCTTAAACTG+AGG | + | chr3_4:72185980-72185999 | Msa0519850:intron | 30.0% | |
| !!! | TTTTTTACTCTGCTTAATGC+TGG | + | chr3_4:72186076-72186095 | Msa0519850:intron | 30.0% |
| ! | TTTTTACTCTGCTTAATGCT+GGG | + | chr3_4:72186077-72186096 | Msa0519850:intron | 30.0% |
| ATATTTGAATATACAGCCAG+TGG | + | chr3_4:72186109-72186128 | Msa0519850:intron | 30.0% | |
| ! | TGCAAAAACCAATTGTCTTT+TGG | + | chr3_4:72186471-72186490 | Msa0519850:intron | 30.0% |
| AATCATCTTGCCCATTATTA+AGG | + | chr3_4:72186508-72186527 | Msa0519850:CDS | 30.0% | |
| ATTCCTTCTGCCTTAATAAT+GGG | - | chr3_4:72186521-72186540 | None:intergenic | 30.0% | |
| ! | GAATACGTCTTTAAAAGTCA+AGG | + | chr3_4:72186615-72186634 | Msa0519850:three_prime_UTR | 30.0% |
| CCCAAAATATAAGCGAAAAT+TGG | - | chr3_4:72186840-72186859 | None:intergenic | 30.0% | |
| !! | TTTTCGCTTATATTTTGGGA+CGG | + | chr3_4:72186841-72186860 | Msa0519850:three_prime_UTR | 30.0% |
| CATTCAATGTTAGTACATGT+TGG | - | chr3_4:72187018-72187037 | None:intergenic | 30.0% | |
| AAACTCAAAACTCTTTGCGT+CGG | - | chr3_4:72181941-72181960 | None:intergenic | 35.0% | |
| GACGTTGATATCATCATTGT+CGG | + | chr3_4:72182135-72182154 | Msa0519850:CDS | 35.0% | |
| GGTGGAAATTACGAAGAAAT+AGG | - | chr3_4:72182220-72182239 | None:intergenic | 35.0% | |
| CACAACAACAGATTTAACCA+TGG | - | chr3_4:72182344-72182363 | None:intergenic | 35.0% | |
| CATGGTTAAATCTGTTGTTG+TGG | + | chr3_4:72182342-72182361 | Msa0519850:intron | 35.0% | |
| !! | TTTAGGTTTGTTGACTGTAC+AGG | + | chr3_4:72182372-72182391 | Msa0519850:intron | 35.0% |
| GATGCATAGTATCACTAACA+TGG | - | chr3_4:72182456-72182475 | None:intergenic | 35.0% | |
| TGTTAGTGATACTATGCATC+CGG | + | chr3_4:72182456-72182475 | Msa0519850:intron | 35.0% | |
| ! | TTGTAATTGTAGCGGAGATA+AGG | + | chr3_4:72182669-72182688 | Msa0519850:intron | 35.0% |
| AGATGGTAGAAACTCAACTT+AGG | + | chr3_4:72182749-72182768 | Msa0519850:intron | 35.0% | |
| AATGGATATTCTGACAGTCA+CGG | + | chr3_4:72183044-72183063 | Msa0519850:intron | 35.0% | |
| GTTTGTACTTAGAAATGGCA+AGG | - | chr3_4:72183121-72183140 | None:intergenic | 35.0% | |
| ! | TGCCATTTCTAAGTACAAAC+TGG | + | chr3_4:72183121-72183140 | Msa0519850:intron | 35.0% |
| GCCATTTCTAAGTACAAACT+GGG | + | chr3_4:72183122-72183141 | Msa0519850:intron | 35.0% | |
| CCATTTCTAAGTACAAACTG+GGG | + | chr3_4:72183123-72183142 | Msa0519850:intron | 35.0% | |
| ACAGAACGCAAACAAAAACT+GGG | - | chr3_4:72183412-72183431 | None:intergenic | 35.0% | |
| AACAGAACGCAAACAAAAAC+TGG | - | chr3_4:72183413-72183432 | None:intergenic | 35.0% | |
| CTATCTCAAATTGATTGAGC+TGG | + | chr3_4:72183625-72183644 | Msa0519850:CDS | 35.0% | |
| GAAACTTAGCAGTGTGTATA+TGG | + | chr3_4:72183662-72183681 | Msa0519850:intron | 35.0% | |
| ! | TCTGAGTGAAACTTTTCCAA+GGG | - | chr3_4:72183895-72183914 | None:intergenic | 35.0% |
| ! | ATCTGAGTGAAACTTTTCCA+AGG | - | chr3_4:72183896-72183915 | None:intergenic | 35.0% |
| ! | TGCTTATAATTTAGGACGGA+GGG | - | chr3_4:72183995-72184014 | None:intergenic | 35.0% |
| ! | TTGCTTATAATTTAGGACGG+AGG | - | chr3_4:72183996-72184015 | None:intergenic | 35.0% |
| TATGTTATGTAGTGTACGGT+TGG | + | chr3_4:72184594-72184613 | Msa0519850:intron | 35.0% | |
| GTACAAAATGAAAGATGCTC+AGG | + | chr3_4:72184672-72184691 | Msa0519850:CDS | 35.0% | |
| GAAACAACCATCACAAACAA+TGG | - | chr3_4:72184722-72184741 | None:intergenic | 35.0% | |
| TCGTTCTCTTTGTAATCCTA+AGG | + | chr3_4:72184753-72184772 | Msa0519850:CDS | 35.0% | |
| CTCTCCATCTGATTTACTAT+GGG | - | chr3_4:72184996-72185015 | None:intergenic | 35.0% | |
| ACTCTCCATCTGATTTACTA+TGG | - | chr3_4:72184997-72185016 | None:intergenic | 35.0% | |
| ATGTAGCCAACGTTATCTAA+CGG | + | chr3_4:72185137-72185156 | Msa0519850:intron | 35.0% | |
| CTTATTCCGTTAGATAACGT+TGG | - | chr3_4:72185146-72185165 | None:intergenic | 35.0% | |
| ACCAATAGTCTGTAGAATTC+TGG | + | chr3_4:72185285-72185304 | Msa0519850:intron | 35.0% | |
| TCCAGAATTCTACAGACTAT+TGG | - | chr3_4:72185289-72185308 | None:intergenic | 35.0% | |
| ACTAAGCCAACAAAACAAGA+GGG | - | chr3_4:72185362-72185381 | None:intergenic | 35.0% | |
| AACTAAGCCAACAAAACAAG+AGG | - | chr3_4:72185363-72185382 | None:intergenic | 35.0% | |
| GCGAATTTCTGTACTACTTA+TGG | - | chr3_4:72185462-72185481 | None:intergenic | 35.0% | |
| AAGGTTCCATCTATTTCCAA+TGG | + | chr3_4:72185506-72185525 | Msa0519850:CDS | 35.0% | |
| ! | ATACTTTGCCATTTCACCAT+TGG | - | chr3_4:72185525-72185544 | None:intergenic | 35.0% |
| ACTTTACACTTAGTGAGAAC+AGG | + | chr3_4:72185627-72185646 | Msa0519850:intron | 35.0% | |
| CTTTACACTTAGTGAGAACA+GGG | + | chr3_4:72185628-72185647 | Msa0519850:intron | 35.0% | |
| CTAAGAGTTAGCTGATGATA+AGG | + | chr3_4:72185670-72185689 | Msa0519850:intron | 35.0% | |
| ! | TCAAGGTATTTACAAAGGCT+AGG | - | chr3_4:72185942-72185961 | None:intergenic | 35.0% |
| TTAAGGAATTACCTTACGCA+AGG | - | chr3_4:72185976-72185995 | None:intergenic | 35.0% | |
| ! | ATTTCTTTTCTTGCTGGATC+AGG | - | chr3_4:72186188-72186207 | None:intergenic | 35.0% |
| TGCTTTGATTATCTGAGTCT+TGG | + | chr3_4:72186218-72186237 | Msa0519850:CDS | 35.0% | |
| GCTTTGATTATCTGAGTCTT+GGG | + | chr3_4:72186219-72186238 | Msa0519850:CDS | 35.0% | |
| CTTTGATTATCTGAGTCTTG+GGG | + | chr3_4:72186220-72186239 | Msa0519850:CDS | 35.0% | |
| TTTGATTATCTGAGTCTTGG+GGG | + | chr3_4:72186221-72186240 | Msa0519850:CDS | 35.0% | |
| AAATGAAGAACCAAACTCAG+GGG | - | chr3_4:72186296-72186315 | None:intergenic | 35.0% | |
| GAAATGAAGAACCAAACTCA+GGG | - | chr3_4:72186297-72186316 | None:intergenic | 35.0% | |
| AGAAATGAAGAACCAAACTC+AGG | - | chr3_4:72186298-72186317 | None:intergenic | 35.0% | |
| TACGATTAATCGCTGTAAGT+AGG | + | chr3_4:72186390-72186409 | Msa0519850:intron | 35.0% | |
| !!! | CGCTGTAAGTAGGAATTTTT+TGG | + | chr3_4:72186400-72186419 | Msa0519850:intron | 35.0% |
| !! | AATAATGGGCAAGATGATTC+CGG | - | chr3_4:72186507-72186526 | None:intergenic | 35.0% |
| GATTCCTTCTGCCTTAATAA+TGG | - | chr3_4:72186522-72186541 | None:intergenic | 35.0% | |
| ATACAAATTTATGCAGCTGG+AGG | - | chr3_4:72186590-72186609 | None:intergenic | 35.0% | |
| AAAACAATGCTAGCTCATCT+TGG | - | chr3_4:72186646-72186665 | None:intergenic | 35.0% | |
| AAATTCTTGCAAGACGCAAA+GGG | + | chr3_4:72186957-72186976 | Msa0519850:three_prime_UTR | 35.0% | |
| TAAATCTGTTGTTGTGGGTC+AGG | + | chr3_4:72182348-72182367 | Msa0519850:intron | 40.0% | |
| AAATCTGTTGTTGTGGGTCA+GGG | + | chr3_4:72182349-72182368 | Msa0519850:intron | 40.0% | |
| ATGGATATTCTGACAGTCAC+GGG | + | chr3_4:72183045-72183064 | Msa0519850:intron | 40.0% | |
| TACTTAGAAATGGCAAGGTG+GGG | - | chr3_4:72183116-72183135 | None:intergenic | 40.0% | |
| GTACTTAGAAATGGCAAGGT+GGG | - | chr3_4:72183117-72183136 | None:intergenic | 40.0% | |
| TGTACTTAGAAATGGCAAGG+TGG | - | chr3_4:72183118-72183137 | None:intergenic | 40.0% | |
| CCCCAGTTTGTACTTAGAAA+TGG | - | chr3_4:72183126-72183145 | None:intergenic | 40.0% | |
| !! | AGTTTGTTAGTTCCCTTACG+AGG | + | chr3_4:72183196-72183215 | Msa0519850:intron | 40.0% |
| ! | GTTTGTTAGTTCCCTTACGA+GGG | + | chr3_4:72183197-72183216 | Msa0519850:intron | 40.0% |
| AGGGTAAAATACCCTCGTAA+GGG | - | chr3_4:72183211-72183230 | None:intergenic | 40.0% | |
| TACAGGGAGCAAAAACAAGA+GGG | - | chr3_4:72183230-72183249 | None:intergenic | 40.0% | |
| ATACAGGGAGCAAAAACAAG+AGG | - | chr3_4:72183231-72183250 | None:intergenic | 40.0% | |
| CTGACTTCTAACTTTCCCTT+TGG | + | chr3_4:72183328-72183347 | Msa0519850:intron | 40.0% | |
| TAACTTTCCCTTTGGTCTCA+AGG | + | chr3_4:72183336-72183355 | Msa0519850:intron | 40.0% | |
| AGTAGAACCTTGAGACCAAA+GGG | - | chr3_4:72183346-72183365 | None:intergenic | 40.0% | |
| TAGTAGAACCTTGAGACCAA+AGG | - | chr3_4:72183347-72183366 | None:intergenic | 40.0% | |
| AAACTGGGAGACAAAAAGAC+AGG | - | chr3_4:72183397-72183416 | None:intergenic | 40.0% | |
| !! | CAAGTTGATTCCTGACATGT+TGG | + | chr3_4:72183446-72183465 | Msa0519850:intron | 40.0% |
| AATGAACCAGACCGAATTGT+TGG | + | chr3_4:72183581-72183600 | Msa0519850:CDS | 40.0% | |
| ! | ATCAATTTGAGATAGCCTCC+AGG | - | chr3_4:72183620-72183639 | None:intergenic | 40.0% |
| ATTGATGCTCAGCAAGTGTT+TGG | + | chr3_4:72183826-72183845 | Msa0519850:CDS | 40.0% | |
| TTGATGCTCAGCAAGTGTTT+GGG | + | chr3_4:72183827-72183846 | Msa0519850:CDS | 40.0% | |
| ! | GTTTGGGTATGCTCTTTTCA+AGG | + | chr3_4:72183843-72183862 | Msa0519850:CDS | 40.0% |
| !! | GGTATGCTCTTTTCAAGGAT+GGG | + | chr3_4:72183848-72183867 | Msa0519850:CDS | 40.0% |
| AAGTTTCACTCAGATATCGC+TGG | + | chr3_4:72183901-72183920 | Msa0519850:CDS | 40.0% | |
| CTGGAAGAAGCTTTCACAAT+GGG | + | chr3_4:72183920-72183939 | Msa0519850:CDS | 40.0% | |
| TTGCTTATAAATTGGGACGG+AGG | + | chr3_4:72184274-72184293 | Msa0519850:intron | 40.0% | |
| TGCTTATAAATTGGGACGGA+GGG | + | chr3_4:72184275-72184294 | Msa0519850:intron | 40.0% | |
| CATTTGACATTGAAAGGCCA+AGG | + | chr3_4:72184413-72184432 | Msa0519850:intron | 40.0% | |
| TGTACCATTCTCTTCGAGTA+GGG | - | chr3_4:72184638-72184657 | None:intergenic | 40.0% | |
| TTGTACCATTCTCTTCGAGT+AGG | - | chr3_4:72184639-72184658 | None:intergenic | 40.0% | |
| CCATCACAAACAATGGTAAG+AGG | - | chr3_4:72184715-72184734 | None:intergenic | 40.0% | |
| CCTCTTACCATTGTTTGTGA+TGG | + | chr3_4:72184712-72184731 | Msa0519850:CDS | 40.0% | |
| AGAATGTTGCACTTGATGTG+TGG | + | chr3_4:72184847-72184866 | Msa0519850:intron | 40.0% | |
| GAACTTCCATGTGCAAATCA+TGG | + | chr3_4:72185395-72185414 | Msa0519850:CDS | 40.0% | |
| AAATCATGGTCACGTCATAC+TGG | + | chr3_4:72185409-72185428 | Msa0519850:CDS | 40.0% | |
| AATCATGGTCACGTCATACT+GGG | + | chr3_4:72185410-72185429 | Msa0519850:CDS | 40.0% | |
| CTTATGGGATAGAACAGAAC+CGG | - | chr3_4:72185446-72185465 | None:intergenic | 40.0% | |
| TAGTACAGAAATTCGCTGTC+TGG | + | chr3_4:72185466-72185485 | Msa0519850:CDS | 40.0% | |
| ! | GGCAAAGTATTTGAAGACAG+TGG | + | chr3_4:72185535-72185554 | Msa0519850:CDS | 40.0% |
| CATCAGCTAACTCTTAGCTA+AGG | - | chr3_4:72185667-72185686 | None:intergenic | 40.0% | |
| TGTTTGGCATTGTCCTTATG+TGG | - | chr3_4:72185758-72185777 | None:intergenic | 40.0% | |
| GCATCATTCAGGTCAAGTAA+AGG | - | chr3_4:72185918-72185937 | None:intergenic | 40.0% | |
| GCAAGGTATAGAAGGATTCA+AGG | - | chr3_4:72185959-72185978 | None:intergenic | 40.0% | |
| ATCCTTCTATACCTTGCGTA+AGG | + | chr3_4:72185962-72185981 | Msa0519850:CDS | 40.0% | |
| TACCTTACGCAAGGTATAGA+AGG | - | chr3_4:72185967-72185986 | None:intergenic | 40.0% | |
| GAATTGGTTGCCTCAGTTTA+AGG | - | chr3_4:72185993-72186012 | None:intergenic | 40.0% | |
| ! | TGACGCATTTCTTTTCTTGC+TGG | - | chr3_4:72186194-72186213 | None:intergenic | 40.0% |
| !! | CTTGGGGGTTTATTTTCAGA+AGG | + | chr3_4:72186236-72186255 | Msa0519850:CDS | 40.0% |
| AATCCTGAAAGCAAAGAGAC+TGG | - | chr3_4:72186263-72186282 | None:intergenic | 40.0% | |
| AATGAAGAACCAAACTCAGG+GGG | - | chr3_4:72186295-72186314 | None:intergenic | 40.0% | |
| TTCCGATCCATATGCGTTTA+GGG | - | chr3_4:72186370-72186389 | None:intergenic | 40.0% | |
| ATTCCGATCCATATGCGTTT+AGG | - | chr3_4:72186371-72186390 | None:intergenic | 40.0% | |
| TTGCCCATTATTAAGGCAGA+AGG | + | chr3_4:72186515-72186534 | Msa0519850:CDS | 40.0% | |
| TTGCAGGGAAGAACATTTGA+CGG | - | chr3_4:72186544-72186563 | None:intergenic | 40.0% | |
| AATAAGCTGGAACAGTTGCA+GGG | - | chr3_4:72186559-72186578 | None:intergenic | 40.0% | |
| TAATAAGCTGGAACAGTTGC+AGG | - | chr3_4:72186560-72186579 | None:intergenic | 40.0% | |
| CAAATTCTTGCAAGACGCAA+AGG | + | chr3_4:72186956-72186975 | Msa0519850:three_prime_UTR | 40.0% | |
| AATTCTTGCAAGACGCAAAG+GGG | + | chr3_4:72186958-72186977 | Msa0519850:three_prime_UTR | 40.0% | |
| AAAAGATCTGCATTCTCCGG+TGG | - | chr3_4:72182103-72182122 | None:intergenic | 45.0% | |
| ATGATATCAACGTCGCCGTT+TGG | - | chr3_4:72182129-72182148 | None:intergenic | 45.0% | |
| GATATCATCATTGTCGGTGC+TGG | + | chr3_4:72182141-72182160 | Msa0519850:CDS | 45.0% | |
| ACTGTGAATGTCCGTATCCA+TGG | + | chr3_4:72182324-72182343 | Msa0519850:intron | 45.0% | |
| TTGTCGCTGTCTAAGTACAC+CGG | - | chr3_4:72182478-72182497 | None:intergenic | 45.0% | |
| AAGTGTGGTCGGTTACATCA+TGG | - | chr3_4:72182961-72182980 | None:intergenic | 45.0% | |
| ATGTAACCGACCACACTTAG+TGG | + | chr3_4:72182963-72182982 | Msa0519850:intron | 45.0% | |
| TTATCGCCACTAAGTGTGGT+CGG | - | chr3_4:72182972-72182991 | None:intergenic | 45.0% | |
| AACCTTATCGCCACTAAGTG+TGG | - | chr3_4:72182976-72182995 | None:intergenic | 45.0% | |
| CACTTAGTGGCGATAAGGTT+TGG | + | chr3_4:72182976-72182995 | Msa0519850:intron | 45.0% | |
| TGGATATTCTGACAGTCACG+GGG | + | chr3_4:72183046-72183065 | Msa0519850:intron | 45.0% | |
| ! | GGCAGCAGATTTTTACCCTT+GGG | + | chr3_4:72183067-72183086 | Msa0519850:intron | 45.0% |
| ! | GATTTTTACCCTTGGGAGTG+AGG | + | chr3_4:72183074-72183093 | Msa0519850:intron | 45.0% |
| GAGGGTAAAATACCCTCGTA+AGG | - | chr3_4:72183212-72183231 | None:intergenic | 45.0% | |
| ATCTAATGTAGGATGGACGG+CGG | + | chr3_4:72183534-72183553 | Msa0519850:intron | 45.0% | |
| GTAGCAACTCGCCAACAATT+CGG | - | chr3_4:72183595-72183614 | None:intergenic | 45.0% | |
| TTGATTGAGCTGGGACTTGA+AGG | + | chr3_4:72183635-72183654 | Msa0519850:CDS | 45.0% | |
| !! | GGGTATGCTCTTTTCAAGGA+TGG | + | chr3_4:72183847-72183866 | Msa0519850:CDS | 45.0% |
| GCTGGAAGAAGCTTTCACAA+TGG | + | chr3_4:72183919-72183938 | Msa0519850:CDS | 45.0% | |
| ATTCGTGCGTGCAGAATCAT+TGG | - | chr3_4:72184375-72184394 | None:intergenic | 45.0% | |
| ACTTCCCTACTCGAAGAGAA+TGG | + | chr3_4:72184631-72184650 | Msa0519850:CDS | 45.0% | |
| !! | TAAGGTGTTTTGGGCATGTG+TGG | + | chr3_4:72184955-72184974 | Msa0519850:intron | 45.0% |
| GAGAGTAGCTCAAATCCTAG+AGG | + | chr3_4:72185011-72185030 | Msa0519850:intron | 45.0% | |
| CTCTCTACTCCTATTCTCGT+CGG | + | chr3_4:72185233-72185252 | Msa0519850:intron | 45.0% | |
| CTTTCTGTGTTTGCAGGTAG+AGG | + | chr3_4:72185334-72185353 | Msa0519850:intron | 45.0% | |
| !!! | GAGGTTCCCTCTTGTTTTGT+TGG | + | chr3_4:72185353-72185372 | Msa0519850:CDS | 45.0% |
| ! | ACGTGACCATGATTTGCACA+TGG | - | chr3_4:72185404-72185423 | None:intergenic | 45.0% |
| ATAGATGGAACCTTCTGACC+AGG | - | chr3_4:72185500-72185519 | None:intergenic | 45.0% | |
| CTTGTAGAACCACGAGTAGA+TGG | - | chr3_4:72185575-72185594 | None:intergenic | 45.0% | |
| TGAAAGCAGCATGAAGCTCA+GGG | - | chr3_4:72185716-72185735 | None:intergenic | 45.0% | |
| ATGAAAGCAGCATGAAGCTC+AGG | - | chr3_4:72185717-72185736 | None:intergenic | 45.0% | |
| TTCATAGCTGCAGTGGACAA+AGG | + | chr3_4:72185732-72185751 | Msa0519850:CDS | 45.0% | |
| GAATGCATCTCCCATCAGAA+GGG | - | chr3_4:72185817-72185836 | None:intergenic | 45.0% | |
| TGAATGCATCTCCCATCAGA+AGG | - | chr3_4:72185818-72185837 | None:intergenic | 45.0% | |
| AAAGGCTAGGTGCATCATTC+AGG | - | chr3_4:72185929-72185948 | None:intergenic | 45.0% | |
| !! | GTATTTATGGTGGATGCCAC+TGG | - | chr3_4:72186128-72186147 | None:intergenic | 45.0% |
| GGCATCCACCATAAATACGT+TGG | + | chr3_4:72186130-72186149 | Msa0519850:CDS | 45.0% | |
| TCCACCATAAATACGTTGGC+AGG | + | chr3_4:72186134-72186153 | Msa0519850:CDS | 45.0% | |
| TCCTGCCAACGTATTTATGG+TGG | - | chr3_4:72186138-72186157 | None:intergenic | 45.0% | |
| TGCTCCTGCCAACGTATTTA+TGG | - | chr3_4:72186141-72186160 | None:intergenic | 45.0% | |
| TTCTTCGCTGTCGCGATATA+TGG | + | chr3_4:72186314-72186333 | Msa0519850:CDS | 45.0% | |
| ATGCGTTTAGGGGAAGGAAA+TGG | - | chr3_4:72186359-72186378 | None:intergenic | 45.0% | |
| TTCCTTCCCCTAAACGCATA+TGG | + | chr3_4:72186360-72186379 | Msa0519850:CDS | 45.0% | |
| ATCCATATGCGTTTAGGGGA+AGG | - | chr3_4:72186365-72186384 | None:intergenic | 45.0% | |
| TCCCCTAAACGCATATGGAT+CGG | + | chr3_4:72186365-72186384 | Msa0519850:CDS | 45.0% | |
| TCCGATCCATATGCGTTTAG+GGG | - | chr3_4:72186369-72186388 | None:intergenic | 45.0% | |
| GCACTCTGCCAAAAGACAAT+TGG | - | chr3_4:72186482-72186501 | None:intergenic | 45.0% | |
| !! | GGAGGTGCTCTATAATAAGC+TGG | - | chr3_4:72186572-72186591 | None:intergenic | 45.0% |
| !!! | TCGCTTATATTTTGGGACGG+AGG | + | chr3_4:72186844-72186863 | Msa0519850:three_prime_UTR | 45.0% |
| !!! | CGCTTATATTTTGGGACGGA+GGG | + | chr3_4:72186845-72186864 | Msa0519850:three_prime_UTR | 45.0% |
| ! | TAGGGGTCGACCATTTTGAG+AGG | - | chr3_4:72181964-72181983 | None:intergenic | 50.0% |
| CTCAAAATGGTCGACCCCTA+CGG | + | chr3_4:72181964-72181983 | Msa0519850:exon | 50.0% | |
| TGGTGGTTGTTGCATCGGAA+TGG | - | chr3_4:72182059-72182078 | None:intergenic | 50.0% | |
| TGTAATGTTCTCAGCGGTGG+TGG | - | chr3_4:72182076-72182095 | None:intergenic | 50.0% | |
| GGTTGTAATGTTCTCAGCGG+TGG | - | chr3_4:72182079-72182098 | None:intergenic | 50.0% | |
| GGCGGTTGTAATGTTCTCAG+CGG | - | chr3_4:72182082-72182101 | None:intergenic | 50.0% | |
| GAGAACATTACAACCGCCAC+CGG | + | chr3_4:72182084-72182103 | Msa0519850:CDS | 50.0% | |
| GTTGTTGTGGGTCAGGGTTT+AGG | + | chr3_4:72182355-72182374 | Msa0519850:intron | 50.0% | |
| GACCACACTTAGTGGCGATA+AGG | + | chr3_4:72182971-72182990 | Msa0519850:intron | 50.0% | |
| ! | GGGCAGCAGATTTTTACCCT+TGG | + | chr3_4:72183066-72183085 | Msa0519850:intron | 50.0% |
| GGGTAATTCCTCACTCCCAA+GGG | - | chr3_4:72183085-72183104 | None:intergenic | 50.0% | |
| AGGGTAATTCCTCACTCCCA+AGG | - | chr3_4:72183086-72183105 | None:intergenic | 50.0% | |
| GTTCTACTATCCAGCTCAGC+TGG | + | chr3_4:72183358-72183377 | Msa0519850:intron | 50.0% | |
| TCTAATGTAGGATGGACGGC+GGG | + | chr3_4:72183535-72183554 | Msa0519850:intron | 50.0% | |
| AACTCGCCAACAATTCGGTC+TGG | - | chr3_4:72183590-72183609 | None:intergenic | 50.0% | |
| ! | TTCTGGCTGATCTTGAGTGC+TGG | + | chr3_4:72183709-72183728 | Msa0519850:intron | 50.0% |
| CACGAGACTCTCTTATCCCT+TGG | + | chr3_4:72183876-72183895 | Msa0519850:CDS | 50.0% | |
| !! | TTAGGACGGAGGGAGTACTT+GGG | - | chr3_4:72183985-72184004 | None:intergenic | 50.0% |
| !! | TTTAGGACGGAGGGAGTACT+TGG | - | chr3_4:72183986-72184005 | None:intergenic | 50.0% |
| ! | AATTGGGACGGAGGGAGTAT+TGG | + | chr3_4:72184283-72184302 | Msa0519850:intron | 50.0% |
| TGTAGTGTACGGTTGGAGCA+AGG | + | chr3_4:72184601-72184620 | Msa0519850:intron | 50.0% | |
| CATACTGGGAGATCCTTCAC+CGG | + | chr3_4:72185424-72185443 | Msa0519850:CDS | 50.0% | |
| GGATAGAACAGAACCGGTGA+AGG | - | chr3_4:72185440-72185459 | None:intergenic | 50.0% | |
| ! | GGTTGATGTTCCTGGTCAGA+AGG | + | chr3_4:72185487-72185506 | Msa0519850:CDS | 50.0% |
| AAAGCAGCATGAAGCTCAGG+GGG | - | chr3_4:72185714-72185733 | None:intergenic | 50.0% | |
| GAAAGCAGCATGAAGCTCAG+GGG | - | chr3_4:72185715-72185734 | None:intergenic | 50.0% | |
| !! | TGCTGCTTTCATAGCTGCAG+TGG | + | chr3_4:72185725-72185744 | Msa0519850:CDS | 50.0% |
| CAGTGGACAAAGGCCACATA+AGG | + | chr3_4:72185742-72185761 | Msa0519850:CDS | 50.0% | |
| !! | GTTGGCAGGAGCACTTTACA+AGG | + | chr3_4:72186148-72186167 | Msa0519850:CDS | 50.0% |
| GGACCAGTCTCTTTGCTTTC+AGG | + | chr3_4:72186257-72186276 | Msa0519850:CDS | 50.0% | |
| GCTGTCGCGATATATGGTGT+TGG | + | chr3_4:72186320-72186339 | Msa0519850:CDS | 50.0% | |
| ! | GTCTTTTGGCAGAGTGCATC+CGG | + | chr3_4:72186485-72186504 | Msa0519850:intron | 50.0% |
| CAGCGAAGCAGAGAGAGAGA+GGG | + | chr3_4:72181877-72181896 | Msa0519850:five_prime_UTR | 55.0% | |
| GCGTCGGAGAGAGAAGATGA+CGG | - | chr3_4:72181925-72181944 | None:intergenic | 55.0% | |
| ATGGTCGACCCCTACGGTTT+CGG | + | chr3_4:72181970-72181989 | Msa0519850:CDS | 55.0% | |
| TGATCCACCCGAAACCGTAG+GGG | - | chr3_4:72181981-72182000 | None:intergenic | 55.0% | |
| GTGATCCACCCGAAACCGTA+GGG | - | chr3_4:72181982-72182001 | None:intergenic | 55.0% | |
| TGTGATCCACCCGAAACCGT+AGG | - | chr3_4:72181983-72182002 | None:intergenic | 55.0% | |
| ! | AGCGGTGGTGGTTGTTGCAT+CGG | - | chr3_4:72182064-72182083 | None:intergenic | 55.0% |
| AGATCTGCATTCTCCGGTGG+CGG | - | chr3_4:72182100-72182119 | None:intergenic | 55.0% | |
| TCCGCTCTCGCTTACACTCT+CGG | + | chr3_4:72182174-72182193 | Msa0519850:CDS | 55.0% | |
| TCTCGCTTACACTCTCGGCA+AGG | + | chr3_4:72182179-72182198 | Msa0519850:CDS | 55.0% | |
| AAGAAGAGGACCAGCTGAGC+TGG | - | chr3_4:72183371-72183390 | None:intergenic | 55.0% | |
| GTTGGCGAGTTGCTACAACC+TGG | + | chr3_4:72183599-72183618 | Msa0519850:CDS | 55.0% | |
| !! | ACGGAGGGAGTACTTGGGAA+GGG | - | chr3_4:72183980-72183999 | None:intergenic | 55.0% |
| !! | GGTGTTTTGGGCATGTGTGG+AGG | + | chr3_4:72184958-72184977 | Msa0519850:intron | 55.0% |
| ! | CGCTGTCTGGTTGATGTTCC+TGG | + | chr3_4:72185479-72185498 | Msa0519850:CDS | 55.0% |
| GAAGACAGTGGTAGCTCCAC+AGG | + | chr3_4:72185547-72185566 | Msa0519850:CDS | 55.0% | |
| CCACGAGTAGATGGTACCTG+TGG | - | chr3_4:72185566-72185585 | None:intergenic | 55.0% | |
| CCACAGGTACCATCTACTCG+TGG | + | chr3_4:72185563-72185582 | Msa0519850:intron | 55.0% | |
| TCGGCTGGCATGCTTCTGTT+TGG | - | chr3_4:72185774-72185793 | None:intergenic | 55.0% | |
| AACATGCGCCATCCCCTAAC+CGG | + | chr3_4:72185837-72185856 | Msa0519850:CDS | 55.0% | |
| ! | GACGGAGGGAGTACATTGCT+GGG | + | chr3_4:72186859-72186878 | Msa0519850:three_prime_UTR | 55.0% |
| CTTGCAAGACGCAAAGGGGA+CGG | + | chr3_4:72186962-72186981 | Msa0519850:three_prime_UTR | 55.0% | |
| CCTCTCTCTCTCTGCTTCGC+TGG | - | chr3_4:72181879-72181898 | None:intergenic | 60.0% | |
| CCAGCGAAGCAGAGAGAGAG+AGG | + | chr3_4:72181876-72181895 | Msa0519850:five_prime_UTR | 60.0% | |
| TGGTCGACCCCTACGGTTTC+GGG | + | chr3_4:72181971-72181990 | Msa0519850:CDS | 60.0% | |
| !! | GAGTGCAGCGAGAGTGCTGA+GGG | - | chr3_4:72182010-72182029 | None:intergenic | 60.0% |
| !! | AGAGTGCAGCGAGAGTGCTG+AGG | - | chr3_4:72182011-72182030 | None:intergenic | 60.0% |
| !! | ATTGTCGGTGCTGGTGTCGC+CGG | + | chr3_4:72182150-72182169 | Msa0519850:CDS | 60.0% |
| AGTGTAAGCGAGAGCGGAGC+CGG | - | chr3_4:72182172-72182191 | None:intergenic | 60.0% | |
| ! | GCCGAGAGTGTAAGCGAGAG+CGG | - | chr3_4:72182178-72182197 | None:intergenic | 60.0% |
| GGCGAGTTGCTACAACCTGG+AGG | + | chr3_4:72183602-72183621 | Msa0519850:CDS | 60.0% | |
| !! | GAGGGAGTACTTGGGAAGGG+AGG | - | chr3_4:72183977-72183996 | None:intergenic | 60.0% |
| !! | GACGGAGGGAGTACTTGGGA+AGG | - | chr3_4:72183981-72184000 | None:intergenic | 60.0% |
| AGCCGATCCTTATCCCACCC+CGG | + | chr3_4:72185788-72185807 | Msa0519850:CDS | 60.0% | |
| TCCCGGGGTGGGATAAGGAT+CGG | - | chr3_4:72185793-72185812 | None:intergenic | 60.0% | |
| TCTCCCATCAGAAGGGCTCC+CGG | - | chr3_4:72185810-72185829 | None:intergenic | 60.0% | |
| ACATGCGCCATCCCCTAACC+GGG | + | chr3_4:72185838-72185857 | Msa0519850:CDS | 60.0% | |
| AGTCATCCCACCCCCGGTTA+GGG | - | chr3_4:72185853-72185872 | None:intergenic | 60.0% | |
| AAACCCTCGCCCCCTGAGTT+TGG | + | chr3_4:72186283-72186302 | Msa0519850:CDS | 60.0% | |
| GAACCAAACTCAGGGGGCGA+GGG | - | chr3_4:72186289-72186308 | None:intergenic | 60.0% | |
| AGAACCAAACTCAGGGGGCG+AGG | - | chr3_4:72186290-72186309 | None:intergenic | 60.0% | |
| ! | GGACGGAGGGAGTACATTGC+TGG | + | chr3_4:72186858-72186877 | Msa0519850:three_prime_UTR | 60.0% |
| TCGACCCCTACGGTTTCGGG+TGG | + | chr3_4:72181974-72181993 | Msa0519850:CDS | 65.0% | |
| GGCAAGGTGGGGTGTGCACA+GGG | - | chr3_4:72183105-72183124 | None:intergenic | 65.0% | |
| TGGCAAGGTGGGGTGTGCAC+AGG | - | chr3_4:72183106-72183125 | None:intergenic | 65.0% | |
| GGGGTGGGATAAGGATCGGC+TGG | - | chr3_4:72185789-72185808 | None:intergenic | 65.0% | |
| GCCGATCCTTATCCCACCCC+GGG | + | chr3_4:72185789-72185808 | Msa0519850:CDS | 65.0% | |
| ATCAGAAGGGCTCCCGGGGT+GGG | - | chr3_4:72185804-72185823 | None:intergenic | 65.0% | |
| ACCCCGGGAGCCCTTCTGAT+GGG | + | chr3_4:72185804-72185823 | Msa0519850:CDS | 65.0% | |
| TCCCATCAGAAGGGCTCCCG+GGG | - | chr3_4:72185808-72185827 | None:intergenic | 65.0% | |
| CTCCCATCAGAAGGGCTCCC+GGG | - | chr3_4:72185809-72185828 | None:intergenic | 65.0% | |
| CATGCGCCATCCCCTAACCG+GGG | + | chr3_4:72185839-72185858 | Msa0519850:CDS | 65.0% | |
| ATGCGCCATCCCCTAACCGG+GGG | + | chr3_4:72185840-72185859 | Msa0519850:CDS | 65.0% | |
| GTCATCCCACCCCCGGTTAG+GGG | - | chr3_4:72185852-72185871 | None:intergenic | 65.0% | |
| CAGTCATCCCACCCCCGGTT+AGG | - | chr3_4:72185854-72185873 | None:intergenic | 65.0% | |
| AACCGGGGGTGGGATGACTG+TGG | + | chr3_4:72185854-72185873 | Msa0519850:CDS | 65.0% | |
| TGCCACAGTCATCCCACCCC+CGG | - | chr3_4:72185859-72185878 | None:intergenic | 65.0% | |
| AGGGCTCCCGGGGTGGGATA+AGG | - | chr3_4:72185798-72185817 | None:intergenic | 70.0% | |
| CATCAGAAGGGCTCCCGGGG+TGG | - | chr3_4:72185805-72185824 | None:intergenic | 70.0% | |
| CACCCCGGGAGCCCTTCTGA+TGG | + | chr3_4:72185803-72185822 | Msa0519850:CDS | 70.0% | |
| GCCATCCCCTAACCGGGGGT+GGG | + | chr3_4:72185844-72185863 | Msa0519850:CDS | 70.0% | |
| TCCCACCCCCGGTTAGGGGA+TGG | - | chr3_4:72185848-72185867 | None:intergenic | 70.0% | |
| CGCCATCCCCTAACCGGGGG+TGG | + | chr3_4:72185843-72185862 | Msa0519850:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 72181857 | 72187066 | 72181857 | ID=Msa0519850;Name=Msa0519850 |
| chr3_4 | mRNA | 72181857 | 72187066 | 72181857 | ID=Msa0519850-mRNA-1;Parent=Msa0519850;Name=Msa0519850-mRNA-1;_AED=0.11;_eAED=0.11;_QI=113|1|1|1|1|1|8|465|521 |
| chr3_4 | exon | 72181857 | 72182200 | 72181857 | ID=Msa0519850-mRNA-1:exon:19909;Parent=Msa0519850-mRNA-1 |
| chr3_4 | exon | 72183545 | 72183656 | 72183545 | ID=Msa0519850-mRNA-1:exon:19910;Parent=Msa0519850-mRNA-1 |
| chr3_4 | exon | 72183812 | 72183986 | 72183812 | ID=Msa0519850-mRNA-1:exon:19911;Parent=Msa0519850-mRNA-1 |
| chr3_4 | exon | 72184606 | 72184774 | 72184606 | ID=Msa0519850-mRNA-1:exon:19912;Parent=Msa0519850-mRNA-1 |
| chr3_4 | exon | 72185350 | 72185568 | 72185350 | ID=Msa0519850-mRNA-1:exon:19913;Parent=Msa0519850-mRNA-1 |
| chr3_4 | exon | 72185708 | 72185983 | 72185708 | ID=Msa0519850-mRNA-1:exon:19914;Parent=Msa0519850-mRNA-1 |
| chr3_4 | exon | 72186125 | 72186403 | 72186125 | ID=Msa0519850-mRNA-1:exon:19915;Parent=Msa0519850-mRNA-1 |
| chr3_4 | exon | 72186497 | 72187066 | 72186497 | ID=Msa0519850-mRNA-1:exon:19916;Parent=Msa0519850-mRNA-1 |
| chr3_4 | five_prime_UTR | 72181857 | 72181969 | 72181857 | ID=Msa0519850-mRNA-1:five_prime_utr;Parent=Msa0519850-mRNA-1 |
| chr3_4 | CDS | 72181970 | 72182200 | 72181970 | ID=Msa0519850-mRNA-1:cds;Parent=Msa0519850-mRNA-1 |
| chr3_4 | CDS | 72183545 | 72183656 | 72183545 | ID=Msa0519850-mRNA-1:cds;Parent=Msa0519850-mRNA-1 |
| chr3_4 | CDS | 72183812 | 72183986 | 72183812 | ID=Msa0519850-mRNA-1:cds;Parent=Msa0519850-mRNA-1 |
| chr3_4 | CDS | 72184606 | 72184774 | 72184606 | ID=Msa0519850-mRNA-1:cds;Parent=Msa0519850-mRNA-1 |
| chr3_4 | CDS | 72185350 | 72185568 | 72185350 | ID=Msa0519850-mRNA-1:cds;Parent=Msa0519850-mRNA-1 |
| chr3_4 | CDS | 72185708 | 72185983 | 72185708 | ID=Msa0519850-mRNA-1:cds;Parent=Msa0519850-mRNA-1 |
| chr3_4 | CDS | 72186125 | 72186403 | 72186125 | ID=Msa0519850-mRNA-1:cds;Parent=Msa0519850-mRNA-1 |
| chr3_4 | CDS | 72186497 | 72186601 | 72186497 | ID=Msa0519850-mRNA-1:cds;Parent=Msa0519850-mRNA-1 |
| chr3_4 | three_prime_UTR | 72186602 | 72187066 | 72186602 | ID=Msa0519850-mRNA-1:three_prime_utr;Parent=Msa0519850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
