Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519770 | XP_013461821.1 | 97.121 | 521 | 13 | 1 | 1 | 521 | 1 | 519 | 0.0 | 1033 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519770 | sp|O48651|SQE1_PANGI | 77.649 | 519 | 112 | 1 | 1 | 519 | 23 | 537 | 0.0 | 825 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519770 | Q8GSM8 | 97.121 | 521 | 13 | 1 | 1 | 521 | 1 | 519 | 0.0 | 1033 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0476080 | Msa0519770 | 0.961398 | 1.177838e-119 | -8.615850e-47 |
| Msa0519770 | Msa0519850 | 0.970971 | 1.959390e-132 | -8.615850e-47 |
| Msa0519770 | Msa0767280 | 0.803337 | 3.657954e-49 | -8.615850e-47 |
| Msa0519770 | Msa1369930 | 0.866104 | 3.637348e-65 | -8.615850e-47 |
| Msa0519770 | Msa1466790 | 0.849094 | 4.030304e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519770 | MtrunA17_Chr3g0135201 | 97.121 | 521 | 13 | 1 | 1 | 521 | 1 | 519 | 0.0 | 1033 |
| Msa0519770 | MtrunA17_Chr1g0152061 | 82.759 | 522 | 86 | 1 | 2 | 519 | 1 | 522 | 0.0 | 876 |
| Msa0519770 | MtrunA17_Chr4g0049291 | 79.264 | 516 | 102 | 3 | 8 | 519 | 9 | 523 | 0.0 | 813 |
| Msa0519770 | MtrunA17_Chr6g0463581 | 77.041 | 196 | 45 | 0 | 323 | 518 | 1 | 196 | 1.14e-105 | 314 |
| Msa0519770 | MtrunA17_Chr6g0463781 | 74.054 | 185 | 48 | 0 | 303 | 487 | 21 | 205 | 2.29e-96 | 291 |
| Msa0519770 | MtrunA17_Chr6g0463601 | 63.529 | 170 | 59 | 2 | 10 | 176 | 12 | 181 | 6.52e-69 | 219 |
| Msa0519770 | MtrunA17_Chr6g0463751 | 74.747 | 99 | 25 | 0 | 78 | 176 | 38 | 136 | 8.01e-51 | 170 |
| Msa0519770 | MtrunA17_Chr5g0411591 | 80.952 | 84 | 16 | 0 | 396 | 479 | 35 | 118 | 5.09e-41 | 144 |
| Msa0519770 | MtrunA17_Chr7g0240231 | 77.381 | 84 | 19 | 0 | 394 | 477 | 33 | 116 | 1.96e-37 | 134 |
| Msa0519770 | MtrunA17_Chr6g0463771 | 73.563 | 87 | 22 | 1 | 229 | 314 | 11 | 97 | 3.34e-36 | 131 |
| Msa0519770 | MtrunA17_Chr6g0463591 | 80.263 | 76 | 14 | 1 | 229 | 303 | 5 | 80 | 4.72e-35 | 126 |
| Msa0519770 | MtrunA17_Chr6g0463761 | 74.138 | 58 | 15 | 0 | 173 | 230 | 24 | 81 | 2.61e-23 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519770 | AT1G58440.1 | 76.436 | 505 | 115 | 2 | 17 | 519 | 21 | 523 | 0.0 | 801 |
| Msa0519770 | AT4G37760.1 | 76.031 | 509 | 116 | 3 | 12 | 517 | 10 | 515 | 0.0 | 768 |
| Msa0519770 | AT2G22830.1 | 74.314 | 510 | 122 | 2 | 17 | 519 | 78 | 585 | 0.0 | 764 |
| Msa0519770 | AT5G24150.1 | 52.229 | 471 | 222 | 2 | 54 | 521 | 43 | 513 | 2.58e-179 | 514 |
| Msa0519770 | AT5G24160.1 | 47.002 | 517 | 259 | 4 | 9 | 521 | 9 | 514 | 1.03e-173 | 500 |
| Msa0519770 | AT5G24150.2 | 53.333 | 435 | 200 | 2 | 54 | 485 | 43 | 477 | 1.63e-168 | 486 |
| Msa0519770 | AT5G24140.1 | 45.298 | 521 | 269 | 6 | 1 | 516 | 1 | 510 | 9.51e-161 | 467 |
| Msa0519770 | AT5G24160.3 | 48.284 | 437 | 222 | 3 | 89 | 521 | 1 | 437 | 3.40e-152 | 442 |
| Msa0519770 | AT5G24160.2 | 47.179 | 390 | 191 | 4 | 9 | 394 | 9 | 387 | 3.38e-126 | 374 |
| Msa0519770 | AT5G24155.2 | 71.930 | 57 | 16 | 0 | 58 | 114 | 49 | 105 | 7.22e-22 | 91.3 |
| Msa0519770 | AT5G24155.3 | 66.667 | 63 | 21 | 0 | 58 | 120 | 49 | 111 | 1.07e-21 | 90.9 |
| Msa0519770 | AT5G24155.1 | 71.930 | 57 | 16 | 0 | 58 | 114 | 49 | 105 | 1.11e-21 | 90.9 |
Find 172 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACCAGTCTCTTTGCTTTC+AGG | 0.135797 | 3_4:+72081967 | Msa0519770:CDS |
| TCAACAAAAGTTAATGTATT+TGG | 0.167062 | 3_4:-72082524 | None:intergenic |
| GCGAATTTCTGTACTACTTA+TGG | 0.178656 | 3_4:-72081169 | None:intergenic |
| TGCTCCTGCCAACGTATTTA+TGG | 0.226048 | 3_4:-72081848 | None:intergenic |
| ATTGAAACGTAAACATTATA+TGG | 0.228307 | 3_4:+72082399 | Msa0519770:three_prime_UTR |
| TGGTCGACCCCTACGGTTTC+GGG | 0.237985 | 3_4:+72077678 | Msa0519770:CDS |
| GATTCCTTCTGCCTTAATAA+TGG | 0.268227 | 3_4:-72082229 | None:intergenic |
| AATCATCTTGCCCATTATTA+AGG | 0.268603 | 3_4:+72082218 | Msa0519770:CDS |
| GAAGAGAATGGTACAATTAA+AGG | 0.280394 | 3_4:+72080353 | Msa0519770:CDS |
| TTCTTCGCTGTCGCGATATA+TGG | 0.282244 | 3_4:+72082024 | Msa0519770:CDS |
| CGCTGTCTGGTTGATGTTCC+TGG | 0.295098 | 3_4:+72081189 | Msa0519770:CDS |
| TAATAAGCTGGAACAGTTGC+AGG | 0.299507 | 3_4:-72082267 | None:intergenic |
| GGACGGAGGGAGTACATTGC+TGG | 0.318839 | 3_4:+72082568 | Msa0519770:three_prime_UTR |
| CGAATTTCTGTACTACTTAT+GGG | 0.320042 | 3_4:-72081168 | None:intergenic |
| ATTCCGATCCATATGCGTTT+AGG | 0.322929 | 3_4:-72082078 | None:intergenic |
| GCTTTGATTATCTGAGTCTT+GGG | 0.327261 | 3_4:+72081929 | Msa0519770:CDS |
| TTCCGATCCATATGCGTTTA+GGG | 0.328350 | 3_4:-72082077 | None:intergenic |
| ATTTCACCATTGGAAATAGA+TGG | 0.333959 | 3_4:-72081222 | None:intergenic |
| TGCTTTGATTATCTGAGTCT+TGG | 0.344637 | 3_4:+72081928 | Msa0519770:CDS |
| ATTCCTTCTGCCTTAATAAT+GGG | 0.347292 | 3_4:-72082228 | None:intergenic |
| ATCTATTTCCAATGGTGAAA+TGG | 0.351927 | 3_4:+72081224 | Msa0519770:CDS |
| ATGGTCGACCCCTACGGTTT+CGG | 0.353513 | 3_4:+72077677 | Msa0519770:CDS |
| TACCTTACGCAAGGTATAGA+AGG | 0.355066 | 3_4:-72081674 | None:intergenic |
| ATTGATGCTCAGCAAGTGTT+TGG | 0.355900 | 3_4:+72079536 | Msa0519770:CDS |
| AACATGCGCCATCCCCTAAC+CGG | 0.356195 | 3_4:+72081547 | Msa0519770:CDS |
| CCCAAAATATAAGCGAAAAT+TGG | 0.361641 | 3_4:-72082547 | None:intergenic |
| ATGATATCAACGTCGCCGTT+TGG | 0.370779 | 3_4:-72077833 | None:intergenic |
| TTCCTTCCCCTAAACGCATA+TGG | 0.381663 | 3_4:+72082070 | Msa0519770:CDS |
| AAAATGTGAAAACAAAATTC+AGG | 0.386876 | 3_4:-72082612 | None:intergenic |
| CTCCCATCAGAAGGGCTCCC+GGG | 0.391611 | 3_4:-72081516 | None:intergenic |
| AAATCATGGTCACGTCATAC+TGG | 0.391765 | 3_4:+72081119 | Msa0519770:CDS |
| AATAATGGGCAAGATGATTC+CGG | 0.399527 | 3_4:-72082214 | None:intergenic |
| TTGATTGAGCTGGGACTTGA+AGG | 0.413598 | 3_4:+72079345 | Msa0519770:CDS |
| AGGGCTCCCGGGGTGGGATA+AGG | 0.421125 | 3_4:-72081505 | None:intergenic |
| AAAGGCTAGGTGCATCATTC+AGG | 0.421944 | 3_4:-72081636 | None:intergenic |
| TCGGCTGGCATGCTTCTGTT+TGG | 0.423353 | 3_4:-72081481 | None:intergenic |
| AGTGTAAGCGAGAGCGGAGC+CGG | 0.434336 | 3_4:-72077876 | None:intergenic |
| AATGAACCAGACCGAATTGT+TGG | 0.440764 | 3_4:+72079291 | Msa0519770:CDS |
| TCTCCCATCAGAAGGGCTCC+CGG | 0.444941 | 3_4:-72081517 | None:intergenic |
| TTGATGCTCAGCAAGTGTTT+GGG | 0.446101 | 3_4:+72079537 | Msa0519770:CDS |
| AAAACAATGCTAGCTCATCT+TGG | 0.446371 | 3_4:-72082353 | None:intergenic |
| CATCAGAAGGGCTCCCGGGG+TGG | 0.453110 | 3_4:-72081512 | None:intergenic |
| TCCGCTCTCGCTTACACTCT+CGG | 0.457292 | 3_4:+72077881 | Msa0519770:CDS |
| ATACTTTGCCATTTCACCAT+TGG | 0.458675 | 3_4:-72081232 | None:intergenic |
| TAGTACAGAAATTCGCTGTC+TGG | 0.460268 | 3_4:+72081176 | Msa0519770:CDS |
| TAAATACAAATTTATGCAGC+TGG | 0.461053 | 3_4:-72082300 | None:intergenic |
| ATGAAAGCAGCATGAAGCTC+AGG | 0.462032 | 3_4:-72081424 | None:intergenic |
| CTGGAAGAAGCTTTCACAAT+GGG | 0.462566 | 3_4:+72079630 | Msa0519770:CDS |
| CCGTTCTCTTTGTAATCCTA+AGG | 0.466319 | 3_4:+72080463 | Msa0519770:CDS |
| ATTGTCGGTGCTGGTGTCGC+CGG | 0.469469 | 3_4:+72077857 | Msa0519770:CDS |
| TGTTTGGCATTGTCCTTATG+TGG | 0.479932 | 3_4:-72081465 | None:intergenic |
| CACCCCGGGAGCCCTTCTGA+TGG | 0.480539 | 3_4:+72081513 | Msa0519770:CDS |
| CTTTGATTATCTGAGTCTTG+GGG | 0.481559 | 3_4:+72081930 | Msa0519770:CDS |
| TATGTTATGTAGTGTACGGT+TGG | 0.482947 | 3_4:+72080304 | Msa0519770:intron |
| AAATTCTTGCAAGACGCAAA+GGG | 0.485245 | 3_4:+72082667 | Msa0519770:three_prime_UTR |
| GGTTGATGTTCCTGGTCAGA+AGG | 0.486415 | 3_4:+72081197 | Msa0519770:CDS |
| ATCAGAAGGGCTCCCGGGGT+GGG | 0.488056 | 3_4:-72081511 | None:intergenic |
| CACGAGACTCTCTTATCCCT+TGG | 0.490385 | 3_4:+72079586 | Msa0519770:CDS |
| TGTACCATTCTCTTCGAGTA+GGG | 0.493101 | 3_4:-72080345 | None:intergenic |
| GTATTTATGGTGGATGCCAC+TGG | 0.494542 | 3_4:-72081835 | None:intergenic |
| AGCGGTGGTGGTTGTTGCAT+CGG | 0.495786 | 3_4:-72077768 | None:intergenic |
| CTATCTCAAATTGATTGAGC+TGG | 0.497355 | 3_4:+72079335 | Msa0519770:CDS |
| GTAGCAACTCGCCAACAATT+CGG | 0.499442 | 3_4:-72079302 | None:intergenic |
| ACATGCGCCATCCCCTAACC+GGG | 0.501803 | 3_4:+72081548 | Msa0519770:CDS |
| AACTCGCCAACAATTCGGTC+TGG | 0.508143 | 3_4:-72079297 | None:intergenic |
| CCTCTTACCATTGTTTGTGA+TGG | 0.509647 | 3_4:+72080422 | Msa0519770:CDS |
| CTTATGGGATAGAACAGAAC+CGG | 0.511065 | 3_4:-72081153 | None:intergenic |
| GTACAAAATGAAAGATGCTC+AGG | 0.511078 | 3_4:+72080382 | Msa0519770:CDS |
| CCATCACAAACAATGGTAAG+AGG | 0.513886 | 3_4:-72080422 | None:intergenic |
| GCCGATCCTTATCCCACCCC+GGG | 0.514148 | 3_4:+72081499 | Msa0519770:CDS |
| CTCAAAATGGTCGACCCCTA+CGG | 0.514180 | 3_4:+72077671 | Msa0519770:exon |
| TTGCAGGGAAGAACATTTGA+CGG | 0.515683 | 3_4:-72082251 | None:intergenic |
| TGGTGGTTGTTGCATCGGAA+TGG | 0.516635 | 3_4:-72077763 | None:intergenic |
| TCCACCATAAATACGTTGGC+AGG | 0.517019 | 3_4:+72081844 | Msa0519770:CDS |
| GAAGACAGTGGTAGCTCCAC+AGG | 0.517798 | 3_4:+72081257 | Msa0519770:CDS |
| ATCCATATGCGTTTAGGGGA+AGG | 0.518020 | 3_4:-72082072 | None:intergenic |
| TTGTACCATTCTCTTCGAGT+AGG | 0.520014 | 3_4:-72080346 | None:intergenic |
| GCAAGGTATAGAAGGATTCA+AGG | 0.524109 | 3_4:-72081666 | None:intergenic |
| ACCCCGGGAGCCCTTCTGAT+GGG | 0.525384 | 3_4:+72081514 | Msa0519770:CDS |
| CAGTGGACAAAGGCCACATA+AGG | 0.527014 | 3_4:+72081452 | Msa0519770:CDS |
| TCCCGGGGTGGGATAAGGAT+CGG | 0.530492 | 3_4:-72081500 | None:intergenic |
| GACGTTGATATCATCATTGT+CGG | 0.531291 | 3_4:+72077842 | Msa0519770:CDS |
| ATTAAAAGATCTGCATTCTC+CGG | 0.538231 | 3_4:-72077810 | None:intergenic |
| AGCCGATCCTTATCCCACCC+CGG | 0.538389 | 3_4:+72081498 | Msa0519770:CDS |
| GAAATGAAGAACCAAACTCA+GGG | 0.539815 | 3_4:-72082004 | None:intergenic |
| GATATCATCATTGTCGGTGC+TGG | 0.540205 | 3_4:+72077848 | Msa0519770:CDS |
| GGAGGTGCTCTATAATAAGC+TGG | 0.541029 | 3_4:-72082279 | None:intergenic |
| ATGCGTTTAGGGGAAGGAAA+TGG | 0.541806 | 3_4:-72082066 | None:intergenic |
| TTGCCCATTATTAAGGCAGA+AGG | 0.548504 | 3_4:+72082225 | Msa0519770:CDS |
| AACACAACACAAACACAGCA+CGG | 0.549311 | 3_4:+72077609 | Msa0519770:five_prime_UTR |
| ATCCTTCTATACCTTGCGTA+AGG | 0.552810 | 3_4:+72081672 | Msa0519770:CDS |
| GCCGAGAGTGTAAGCGAGAG+CGG | 0.554979 | 3_4:-72077882 | None:intergenic |
| AATCATGGTCACGTCATACT+GGG | 0.555739 | 3_4:+72081120 | Msa0519770:CDS |
| GTGATCCACCCGAAACCGTA+GGG | 0.555940 | 3_4:-72077686 | None:intergenic |
| CAAATTCTTGCAAGACGCAA+AGG | 0.557420 | 3_4:+72082666 | Msa0519770:three_prime_UTR |
| TCCCATCAGAAGGGCTCCCG+GGG | 0.560065 | 3_4:-72081515 | None:intergenic |
| AGAAATGAAGAACCAAACTC+AGG | 0.560990 | 3_4:-72082005 | None:intergenic |
| CATTCAATGTTAGTACATGT+TGG | 0.561288 | 3_4:-72082725 | None:intergenic |
| TATCTCAAATTGATTGAGCT+GGG | 0.564234 | 3_4:+72079336 | Msa0519770:CDS |
| AGATCTGCATTCTCCGGTGG+CGG | 0.564343 | 3_4:-72077804 | None:intergenic |
| AAGTTTCACTCAGATATCGC+TGG | 0.567766 | 3_4:+72079611 | Msa0519770:CDS |
| GGGGTGGGATAAGGATCGGC+TGG | 0.568649 | 3_4:-72081496 | None:intergenic |
| AATCCTGAAAGCAAAGAGAC+TGG | 0.569045 | 3_4:-72081970 | None:intergenic |
| TCCCCTAAACGCATATGGAT+CGG | 0.569073 | 3_4:+72082075 | Msa0519770:CDS |
| GACGGAGGGAGTACATTGCT+GGG | 0.569413 | 3_4:+72082569 | Msa0519770:three_prime_UTR |
| TGCTGCTTTCATAGCTGCAG+TGG | 0.570794 | 3_4:+72081435 | Msa0519770:CDS |
| TGCCACAGTCATCCCACCCC+CGG | 0.571168 | 3_4:-72081566 | None:intergenic |
| AAGGTTCCATCTATTTCCAA+TGG | 0.571490 | 3_4:+72081216 | Msa0519770:CDS |
| GCATCATTCAGGTCAAGTAA+AGG | 0.573325 | 3_4:-72081625 | None:intergenic |
| ATCAATTTGAGATAGCCTCC+AGG | 0.576174 | 3_4:-72079327 | None:intergenic |
| TTCATAGCTGCAGTGGACAA+AGG | 0.578009 | 3_4:+72081442 | Msa0519770:CDS |
| GTTGGCGAGTTGCTACAACC+TGG | 0.579187 | 3_4:+72079309 | Msa0519770:CDS |
| ACTTCCCTACTCGAAGAGAA+TGG | 0.579687 | 3_4:+72080341 | Msa0519770:CDS |
| GTTGGCAGGAGCACTTTACA+AGG | 0.579726 | 3_4:+72081858 | Msa0519770:CDS |
| AACTAAGCCAACAAAACAAG+AGG | 0.581348 | 3_4:-72081070 | None:intergenic |
| AGGATTCAAGGTATTTACAA+AGG | 0.585424 | 3_4:-72081654 | None:intergenic |
| TGAAAGCAGCATGAAGCTCA+GGG | 0.587959 | 3_4:-72081423 | None:intergenic |
| GGATAGAACAGAACCGGTGA+AGG | 0.588623 | 3_4:-72081147 | None:intergenic |
| GAGAACATTACAACCGCCAC+CGG | 0.589265 | 3_4:+72077791 | Msa0519770:CDS |
| TTTGATTATCTGAGTCTTGG+GGG | 0.589666 | 3_4:+72081931 | Msa0519770:CDS |
| GAACTTCCATGTGCAAATCA+TGG | 0.591041 | 3_4:+72081105 | Msa0519770:CDS |
| TCAAGGTATTTACAAAGGCT+AGG | 0.592034 | 3_4:-72081649 | None:intergenic |
| GCTGTCGCGATATATGGTGT+TGG | 0.596308 | 3_4:+72082030 | Msa0519770:CDS |
| TGTTATTATTGCAGATTGTG+TGG | 0.599886 | 3_4:+72079508 | Msa0519770:intron |
| TGAATGCATCTCCCATCAGA+AGG | 0.601414 | 3_4:-72081525 | None:intergenic |
| AAACTCAAAACTCTTTGCGT+CGG | 0.601833 | 3_4:-72077645 | None:intergenic |
| TGTAATGTTCTCAGCGGTGG+TGG | 0.602589 | 3_4:-72077780 | None:intergenic |
| TGTAGTGTACGGTTGGAGCA+AGG | 0.602718 | 3_4:+72080311 | Msa0519770:intron |
| CTTGCAAGACGCAAAGGGGA+CGG | 0.605588 | 3_4:+72082672 | Msa0519770:three_prime_UTR |
| ATTATCTAATGTAGGATGGA+CGG | 0.607031 | 3_4:+72079241 | Msa0519770:intron |
| TCTCGCTTACACTCTCGGCA+AGG | 0.608886 | 3_4:+72077886 | Msa0519770:CDS |
| GAAACAACCATCACAAACAA+TGG | 0.613084 | 3_4:-72080429 | None:intergenic |
| TGTGATCCACCCGAAACCGT+AGG | 0.613578 | 3_4:-72077687 | None:intergenic |
| AATAAGCTGGAACAGTTGCA+GGG | 0.614063 | 3_4:-72082266 | None:intergenic |
| TTAAGGAATTACCTTACGCA+AGG | 0.617927 | 3_4:-72081683 | None:intergenic |
| GACGGAGGGAGTACTTGGGA+AGG | 0.618544 | 3_4:-72079688 | None:intergenic |
| TCCGATCCATATGCGTTTAG+GGG | 0.629892 | 3_4:-72082076 | None:intergenic |
| ATAGATGGAACCTTCTGACC+AGG | 0.631618 | 3_4:-72081207 | None:intergenic |
| GAAATTGTAGAGTGCAGCGA+GGG | 0.631962 | 3_4:-72077723 | None:intergenic |
| TTACGTCCAGCGAAGAGAGA+GGG | 0.632879 | 3_4:+72077584 | Msa0519770:five_prime_UTR |
| GAGTGCAGCGAGGGTGATGA+GGG | 0.633052 | 3_4:-72077714 | None:intergenic |
| TCTAATGTAGGATGGACGGC+GGG | 0.636695 | 3_4:+72079245 | Msa0519770:intron |
| GAATGCATCTCCCATCAGAA+GGG | 0.640289 | 3_4:-72081524 | None:intergenic |
| CCTTAGGATTACAAAGAGAA+CGG | 0.642410 | 3_4:-72080463 | None:intergenic |
| AGAGTGCAGCGAGGGTGATG+AGG | 0.642797 | 3_4:-72077715 | None:intergenic |
| GAATACGTCTTTAAAAGTCA+AGG | 0.643454 | 3_4:+72082325 | Msa0519770:three_prime_UTR |
| GGCATCCACCATAAATACGT+TGG | 0.644019 | 3_4:+72081840 | Msa0519770:CDS |
| ATCTAATGTAGGATGGACGG+CGG | 0.644873 | 3_4:+72079244 | Msa0519770:intron |
| ATACAAATTTATGCAGCTGG+AGG | 0.648738 | 3_4:-72082297 | None:intergenic |
| GAGGGAGTACTTGGGAAGGG+AGG | 0.650679 | 3_4:-72079684 | None:intergenic |
| AAAAGATCTGCATTCTCCGG+TGG | 0.650741 | 3_4:-72077807 | None:intergenic |
| GGTTGTAATGTTCTCAGCGG+TGG | 0.651335 | 3_4:-72077783 | None:intergenic |
| ATTACGTCCAGCGAAGAGAG+AGG | 0.654846 | 3_4:+72077583 | Msa0519770:five_prime_UTR |
| ACGGAGGGAGTACTTGGGAA+GGG | 0.655483 | 3_4:-72079687 | None:intergenic |
| TCGACCCCTACGGTTTCGGG+TGG | 0.658583 | 3_4:+72077681 | Msa0519770:CDS |
| AAAGCAGCATGAAGCTCAGG+GGG | 0.659168 | 3_4:-72081421 | None:intergenic |
| CATGCGCCATCCCCTAACCG+GGG | 0.661135 | 3_4:+72081549 | Msa0519770:CDS |
| GGCAAAGTATTTGAAGACAG+TGG | 0.664630 | 3_4:+72081245 | Msa0519770:CDS |
| ACTAAGCCAACAAAACAAGA+GGG | 0.667139 | 3_4:-72081069 | None:intergenic |
| ATGCGCCATCCCCTAACCGG+GGG | 0.670116 | 3_4:+72081550 | Msa0519770:CDS |
| TCCTGCCAACGTATTTATGG+TGG | 0.676661 | 3_4:-72081845 | None:intergenic |
| AATTCTTGCAAGACGCAAAG+GGG | 0.677732 | 3_4:+72082668 | Msa0519770:three_prime_UTR |
| CATACTGGGAGATCCTTCAC+CGG | 0.681263 | 3_4:+72081134 | Msa0519770:CDS |
| AATGAAGAACCAAACTCAGG+GGG | 0.690809 | 3_4:-72082002 | None:intergenic |
| GGCGAGTTGCTACAACCTGG+AGG | 0.693043 | 3_4:+72079312 | Msa0519770:CDS |
| GCTGGAAGAAGCTTTCACAA+TGG | 0.694395 | 3_4:+72079629 | Msa0519770:CDS |
| GGCGGTTGTAATGTTCTCAG+CGG | 0.696843 | 3_4:-72077786 | None:intergenic |
| GAAAGCAGCATGAAGCTCAG+GGG | 0.705422 | 3_4:-72081422 | None:intergenic |
| TGATCCACCCGAAACCGTAG+GGG | 0.715386 | 3_4:-72077685 | None:intergenic |
| ACGTGACCATGATTTGCACA+TGG | 0.721204 | 3_4:-72081111 | None:intergenic |
| AAATGAAGAACCAAACTCAG+GGG | 0.723277 | 3_4:-72082003 | None:intergenic |
| GGAAATTGTAGAGTGCAGCG+AGG | 0.733685 | 3_4:-72077724 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCTATATATTAATAAGT+TGG | + | chr3_4:72078607-72078626 | Msa0519770:intron | 10.0% |
| !! | ATTCAAAAGAAAAAAAATTA+AGG | - | chr3_4:72081730-72081749 | None:intergenic | 10.0% |
| !!! | TTTTTTTCTTTTGAATTAAA+AGG | + | chr3_4:72081734-72081753 | Msa0519770:intron | 10.0% |
| !!! | ATTTTATTTGAATAAATTGT+TGG | + | chr3_4:72082143-72082162 | Msa0519770:intron | 10.0% |
| !! | TAAACAAATGTTAATATGAA+TGG | - | chr3_4:72077948-72077967 | None:intergenic | 15.0% |
| !!! | TAACTTTCAAATTTCTATTT+TGG | + | chr3_4:72078224-72078243 | Msa0519770:intron | 15.0% |
| !! | CCAAAATATAATACTTAAAA+TGG | - | chr3_4:72078281-72078300 | None:intergenic | 15.0% |
| !!! | CCATTTTAAGTATTATATTT+TGG | + | chr3_4:72078278-72078297 | Msa0519770:intron | 15.0% |
| !! | TAAAATAATTGTAATTGTAG+CGG | + | chr3_4:72078371-72078390 | Msa0519770:intron | 15.0% |
| !! | TTAATATTTGAACTGTAAAT+AGG | - | chr3_4:72078736-72078755 | None:intergenic | 15.0% |
| !! | ATTTACAGTTCAAATATTAA+TGG | + | chr3_4:72078736-72078755 | Msa0519770:intron | 15.0% |
| !!! | GATTTTTTTGCTTATAATTT+AGG | - | chr3_4:72079713-72079732 | None:intergenic | 15.0% |
| !!! | TTTTGAAATAACATAAAAGT+TGG | - | chr3_4:72079771-72079790 | None:intergenic | 15.0% |
| !!! | ATTTGCATTTAATTTTACTT+TGG | - | chr3_4:72079806-72079825 | None:intergenic | 15.0% |
| !!! | ATAATTTTTTGTGTTTTTCT+TGG | - | chr3_4:72079913-72079932 | None:intergenic | 15.0% |
| !! | AACTTTATATCAGAAAAAAA+CGG | - | chr3_4:72080040-72080059 | None:intergenic | 15.0% |
| !! | TTATGAATTATGAATGGAAT+GGG | + | chr3_4:72078124-72078143 | Msa0519770:intron | 20.0% |
| !! | AAAATAATTGTAATTGTAGC+GGG | + | chr3_4:72078372-72078391 | Msa0519770:intron | 20.0% |
| !! | AATTAAGGGATATTTATACA+GGG | - | chr3_4:72078956-72078975 | None:intergenic | 20.0% |
| !!! | TAGTTTTCCATATTCATTTT+AGG | + | chr3_4:72079001-72079020 | Msa0519770:intron | 20.0% |
| !!! | AGTTTTCCATATTCATTTTA+GGG | + | chr3_4:72079002-72079021 | Msa0519770:intron | 20.0% |
| !!! | TTTTTGCTTATAATTTAGGA+CGG | - | chr3_4:72079709-72079728 | None:intergenic | 20.0% |
| !!! | GTCTTTTTTGCTTATATTTT+GGG | - | chr3_4:72079749-72079768 | None:intergenic | 20.0% |
| !!! | TTCTTATTGGTTAATGATTA+TGG | - | chr3_4:72079860-72079879 | None:intergenic | 20.0% |
| !! | GATGTAAAAACAATTCTTAT+TGG | - | chr3_4:72079873-72079892 | None:intergenic | 20.0% |
| !!! | TGTGTTTTTTGCTTATAAAT+TGG | + | chr3_4:72079976-72079995 | Msa0519770:intron | 20.0% |
| !!! | GTGTTTTTTGCTTATAAATT+GGG | + | chr3_4:72079977-72079996 | Msa0519770:intron | 20.0% |
| !! | TTTATTATAATCAATGACCT+TGG | - | chr3_4:72080143-72080162 | None:intergenic | 20.0% |
| !!! | TTTTTATGTTATGTAGTGTA+CGG | + | chr3_4:72080300-72080319 | Msa0519770:intron | 20.0% |
| !! | AATAATAGACAAAATAGGAT+TGG | + | chr3_4:72080581-72080600 | Msa0519770:intron | 20.0% |
| !! | ATAATAGACAAAATAGGATT+GGG | + | chr3_4:72080582-72080601 | Msa0519770:intron | 20.0% |
| !! | TGTGAAATCATTTAATCTTA+TGG | - | chr3_4:72080908-72080927 | None:intergenic | 20.0% |
| !!! | ACAAGTACAAATTGTTTTTT+AGG | + | chr3_4:72081300-72081319 | Msa0519770:intron | 20.0% |
| !! | ATTGAAACGTAAACATTATA+TGG | + | chr3_4:72082399-72082418 | Msa0519770:three_prime_UTR | 20.0% |
| !!! | CTTTTAAGTTTGATTCTTTA+TGG | + | chr3_4:72082422-72082441 | Msa0519770:three_prime_UTR | 20.0% |
| !! | TCAACAAAAGTTAATGTATT+TGG | - | chr3_4:72082527-72082546 | None:intergenic | 20.0% |
| !! | AAAATGTGAAAACAAAATTC+AGG | - | chr3_4:72082615-72082634 | None:intergenic | 20.0% |
| ! | AATTACGAAGAAATAGGAAT+GGG | - | chr3_4:72077921-72077940 | None:intergenic | 25.0% |
| ! | AAATTACGAAGAAATAGGAA+TGG | - | chr3_4:72077922-72077941 | None:intergenic | 25.0% |
| ! | ACAAATGTTAATATGAATGG+TGG | - | chr3_4:72077945-72077964 | None:intergenic | 25.0% |
| !! | AAATTACTGTGTTTTGTATC+TGG | + | chr3_4:72077994-72078013 | Msa0519770:intron | 25.0% |
| ! | TACCAGTTATGAATTATGAA+TGG | + | chr3_4:72078118-72078137 | Msa0519770:intron | 25.0% |
| ! | TTCCATTCATAATTCATAAC+TGG | - | chr3_4:72078123-72078142 | None:intergenic | 25.0% |
| ! | GTTATGAATTATGAATGGAA+TGG | + | chr3_4:72078123-72078142 | Msa0519770:intron | 25.0% |
| ! | TATGAATTATGAATGGAATG+GGG | + | chr3_4:72078125-72078144 | Msa0519770:intron | 25.0% |
| ! | AAATAATTGTAATTGTAGCG+GGG | + | chr3_4:72078373-72078392 | Msa0519770:intron | 25.0% |
| ! | TTAGAAATGACAACATTAGA+TGG | + | chr3_4:72078442-72078461 | Msa0519770:intron | 25.0% |
| !! | AGACATATAGATTTTGTGTA+AGG | + | chr3_4:72078503-72078522 | Msa0519770:intron | 25.0% |
| !!! | AGTTAGTTTTAGTTAGTTTG+AGG | + | chr3_4:72078872-72078891 | Msa0519770:intron | 25.0% |
| ! | CAATTAAGGGATATTTATAC+AGG | - | chr3_4:72078957-72078976 | None:intergenic | 25.0% |
| ! | CTGTATAAATATCCCTTAAT+TGG | + | chr3_4:72078955-72078974 | Msa0519770:intron | 25.0% |
| !! | GTTTTCCATATTCATTTTAG+GGG | + | chr3_4:72079003-72079022 | Msa0519770:intron | 25.0% |
| ! | GCATAACTATTATCTAATGT+AGG | + | chr3_4:72079233-72079252 | Msa0519770:intron | 25.0% |
| ! | AACTATTATCTAATGTAGGA+TGG | + | chr3_4:72079237-72079256 | Msa0519770:intron | 25.0% |
| !! | TGTTCTAAGTGAAGTTAAAA+AGG | - | chr3_4:72079466-72079485 | None:intergenic | 25.0% |
| ! | TAACTTCACTTAGAACAAAA+AGG | + | chr3_4:72079469-72079488 | Msa0519770:intron | 25.0% |
| ! | AACTTCACTTAGAACAAAAA+GGG | + | chr3_4:72079470-72079489 | Msa0519770:intron | 25.0% |
| !!! | GGTCTTTTTTGCTTATATTT+TGG | - | chr3_4:72079750-72079769 | None:intergenic | 25.0% |
| ! | AACAAAAACATAGTAGTTTG+AGG | - | chr3_4:72079937-72079956 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATTGGGA+CGG | + | chr3_4:72079981-72080000 | Msa0519770:intron | 25.0% |
| ! | GTGGAAATAATAGACAAAAT+AGG | + | chr3_4:72080576-72080595 | Msa0519770:intron | 25.0% |
| ! | AATTATAGCATTAGAGAGTT+TGG | + | chr3_4:72080605-72080624 | Msa0519770:intron | 25.0% |
| ! | ATTATAGCATTAGAGAGTTT+GGG | + | chr3_4:72080606-72080625 | Msa0519770:intron | 25.0% |
| ! | AGATAGTTGTATATCAACTA+AGG | + | chr3_4:72080647-72080666 | Msa0519770:intron | 25.0% |
| !!! | TATATCAACTAAGGTGTTTT+GGG | + | chr3_4:72080656-72080675 | Msa0519770:intron | 25.0% |
| ! | AAGACTTGAGGTAAATTATA+TGG | + | chr3_4:72080779-72080798 | Msa0519770:intron | 25.0% |
| ! | AACGTTATGATATTCTATCA+TGG | - | chr3_4:72080818-72080837 | None:intergenic | 25.0% |
| !!! | TGGTTGTTTTATGATGTTAT+AGG | + | chr3_4:72080879-72080898 | Msa0519770:intron | 25.0% |
| ! | GTGTAAAGTAATTAAATGCT+AGG | - | chr3_4:72081326-72081345 | None:intergenic | 25.0% |
| ! | AAAAAATTAAGGTGAAGAAG+TGG | - | chr3_4:72081719-72081738 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTGCAATTAAAGT+GGG | - | chr3_4:72082173-72082192 | None:intergenic | 25.0% |
| !!! | ATTGGTTTTTGCAATTAAAG+TGG | - | chr3_4:72082174-72082193 | None:intergenic | 25.0% |
| ! | TAAATACAAATTTATGCAGC+TGG | - | chr3_4:72082303-72082322 | None:intergenic | 25.0% |
| !! | GTTTTCAGTTAGAAATCTAA+CGG | + | chr3_4:72082371-72082390 | Msa0519770:three_prime_UTR | 25.0% |
| !!! | TTTTTGTTTACATTTTGGGA+CGG | - | chr3_4:72082465-72082484 | None:intergenic | 25.0% |
| !!! | CCGATTTTTGTTTACATTTT+GGG | - | chr3_4:72082469-72082488 | None:intergenic | 25.0% |
| ! | CCCAAAATGTAAACAAAAAT+CGG | + | chr3_4:72082466-72082485 | Msa0519770:three_prime_UTR | 25.0% |
| !!! | ACCGATTTTTGTTTACATTT+TGG | - | chr3_4:72082470-72082489 | None:intergenic | 25.0% |
| !! | ACCAATTTTCGCTTATATTT+TGG | + | chr3_4:72082546-72082565 | Msa0519770:three_prime_UTR | 25.0% |
| !! | CCAATTTTCGCTTATATTTT+GGG | + | chr3_4:72082547-72082566 | Msa0519770:three_prime_UTR | 25.0% |
| !! | TTGTTTTCACATTTTATAGC+TGG | + | chr3_4:72082620-72082639 | Msa0519770:three_prime_UTR | 25.0% |
| !!! | TTTTGAGTTTCCTCTCAAAA+TGG | + | chr3_4:72077658-72077677 | Msa0519770:exon | 30.0% |
| ! | AATGGTTTTTACGAGAGAAA+AGG | - | chr3_4:72077748-72077767 | None:intergenic | 30.0% |
| ATTAAAAGATCTGCATTCTC+CGG | - | chr3_4:72077813-72077832 | None:intergenic | 30.0% | |
| ! | TGCAGATCTTTTAATCCAAA+CGG | + | chr3_4:72077818-72077837 | Msa0519770:CDS | 30.0% |
| AACAGATTTAACCATGGATA+CGG | - | chr3_4:72078049-72078068 | None:intergenic | 30.0% | |
| ATGGTTAAATCTGTTGTTGT+GGG | + | chr3_4:72078054-72078073 | Msa0519770:intron | 30.0% | |
| GTAAGGAGAATTAGATCAAA+TGG | + | chr3_4:72078520-72078539 | Msa0519770:intron | 30.0% | |
| CATTGATGAACTCCAATTAA+GGG | - | chr3_4:72078970-72078989 | None:intergenic | 30.0% | |
| TCATTGATGAACTCCAATTA+AGG | - | chr3_4:72078971-72078990 | None:intergenic | 30.0% | |
| ! | GTTTTCCCCTAAAATGAATA+TGG | - | chr3_4:72079011-72079030 | None:intergenic | 30.0% |
| AAAAAGACAGGAAAAAGAAG+AGG | - | chr3_4:72079095-72079114 | None:intergenic | 30.0% | |
| TTAAAAACATCCAACATGTC+AGG | - | chr3_4:72079169-72079188 | None:intergenic | 30.0% | |
| ATTATCTAATGTAGGATGGA+CGG | + | chr3_4:72079241-72079260 | Msa0519770:intron | 30.0% | |
| TATCTCAAATTGATTGAGCT+GGG | + | chr3_4:72079336-72079355 | Msa0519770:CDS | 30.0% | |
| TTTCTTTCACTTCTTGATTC+TGG | + | chr3_4:72079402-72079421 | Msa0519770:intron | 30.0% | |
| TGTTATTATTGCAGATTGTG+TGG | + | chr3_4:72079508-72079527 | Msa0519770:intron | 30.0% | |
| TGATTATGGAGAGAATAGAA+AGG | - | chr3_4:72079846-72079865 | None:intergenic | 30.0% | |
| AAAAACGGAATGTGAAGTAA+AGG | - | chr3_4:72080025-72080044 | None:intergenic | 30.0% | |
| ! | GCTTTTCATTTGACATTGAA+AGG | + | chr3_4:72080117-72080136 | Msa0519770:intron | 30.0% |
| TAACAAGTAACAACTGAAGA+AGG | - | chr3_4:72080266-72080285 | None:intergenic | 30.0% | |
| GAAGAGAATGGTACAATTAA+AGG | + | chr3_4:72080353-72080372 | Msa0519770:CDS | 30.0% | |
| GTTGAAAATTTGATCACCTT+AGG | - | chr3_4:72080482-72080501 | None:intergenic | 30.0% | |
| !! | GTATATCAACTAAGGTGTTT+TGG | + | chr3_4:72080655-72080674 | Msa0519770:intron | 30.0% |
| TGATTTACTATGGGATTTAC+AGG | - | chr3_4:72080697-72080716 | None:intergenic | 30.0% | |
| AAATCCCATAGTAAATCAGA+TGG | + | chr3_4:72080699-72080718 | Msa0519770:intron | 30.0% | |
| ! | ATTTTTCTAGATCTACCTCT+AGG | - | chr3_4:72080739-72080758 | None:intergenic | 30.0% |
| GGTAGATCTAGAAAAATTGT+AGG | + | chr3_4:72080742-72080761 | Msa0519770:intron | 30.0% | |
| TGATTATCAAGAAAGACTTG+AGG | + | chr3_4:72080767-72080786 | Msa0519770:intron | 30.0% | |
| TTATCTAACGGAATAAGACT+TGG | + | chr3_4:72080859-72080878 | Msa0519770:intron | 30.0% | |
| AAAAAAAAACCGACGAGAAT+AGG | - | chr3_4:72080955-72080974 | None:intergenic | 30.0% | |
| ! | TTATTTCTTTCTGTGTTTGC+AGG | + | chr3_4:72081038-72081057 | Msa0519770:intron | 30.0% |
| CGAATTTCTGTACTACTTAT+GGG | - | chr3_4:72081171-72081190 | None:intergenic | 30.0% | |
| ATTTCACCATTGGAAATAGA+TGG | - | chr3_4:72081225-72081244 | None:intergenic | 30.0% | |
| ATCTATTTCCAATGGTGAAA+TGG | + | chr3_4:72081224-72081243 | Msa0519770:CDS | 30.0% | |
| TAAGAGTTAGCTGATGATAA+GGG | + | chr3_4:72081381-72081400 | Msa0519770:intron | 30.0% | |
| GATAAGGGAAAAAAATTTGC+AGG | + | chr3_4:72081396-72081415 | Msa0519770:intron | 30.0% | |
| ! | AGGATTCAAGGTATTTACAA+AGG | - | chr3_4:72081657-72081676 | None:intergenic | 30.0% |
| TAAGGTAATTCCTTAAACTG+AGG | + | chr3_4:72081690-72081709 | Msa0519770:intron | 30.0% | |
| !!! | TTTTTTACTCTGCTTAATGC+TGG | + | chr3_4:72081786-72081805 | Msa0519770:intron | 30.0% |
| ! | TTTTTACTCTGCTTAATGCT+GGG | + | chr3_4:72081787-72081806 | Msa0519770:intron | 30.0% |
| ATATTTGAATATACAGCCAG+TGG | + | chr3_4:72081819-72081838 | Msa0519770:intron | 30.0% | |
| ! | TGCAAAAACCAATTGTCTTT+TGG | + | chr3_4:72082181-72082200 | Msa0519770:intron | 30.0% |
| AATCATCTTGCCCATTATTA+AGG | + | chr3_4:72082218-72082237 | Msa0519770:CDS | 30.0% | |
| ATTCCTTCTGCCTTAATAAT+GGG | - | chr3_4:72082231-72082250 | None:intergenic | 30.0% | |
| ! | GAATACGTCTTTAAAAGTCA+AGG | + | chr3_4:72082325-72082344 | Msa0519770:three_prime_UTR | 30.0% |
| CCCAAAATATAAGCGAAAAT+TGG | - | chr3_4:72082550-72082569 | None:intergenic | 30.0% | |
| !! | TTTTCGCTTATATTTTGGGA+CGG | + | chr3_4:72082551-72082570 | Msa0519770:three_prime_UTR | 30.0% |
| CATTCAATGTTAGTACATGT+TGG | - | chr3_4:72082728-72082747 | None:intergenic | 30.0% | |
| AAACTCAAAACTCTTTGCGT+CGG | - | chr3_4:72077648-72077667 | None:intergenic | 35.0% | |
| GACGTTGATATCATCATTGT+CGG | + | chr3_4:72077842-72077861 | Msa0519770:CDS | 35.0% | |
| GGTGGAAATTACGAAGAAAT+AGG | - | chr3_4:72077927-72077946 | None:intergenic | 35.0% | |
| CACAACAACAGATTTAACCA+TGG | - | chr3_4:72078055-72078074 | None:intergenic | 35.0% | |
| CATGGTTAAATCTGTTGTTG+TGG | + | chr3_4:72078053-72078072 | Msa0519770:intron | 35.0% | |
| !! | TTTAGGTTTGTTGACTGTAC+AGG | + | chr3_4:72078083-72078102 | Msa0519770:intron | 35.0% |
| GATGCATAGTATCACTAACA+TGG | - | chr3_4:72078167-72078186 | None:intergenic | 35.0% | |
| TGTTAGTGATACTATGCATC+CGG | + | chr3_4:72078167-72078186 | Msa0519770:intron | 35.0% | |
| AGATGGTAGAAACTCAACTT+AGG | + | chr3_4:72078459-72078478 | Msa0519770:intron | 35.0% | |
| AGTGAAATCAAAAGAGACAG+AGG | + | chr3_4:72078548-72078567 | Msa0519770:intron | 35.0% | |
| GTTTGTACTTAGAAATGGCA+AGG | - | chr3_4:72078831-72078850 | None:intergenic | 35.0% | |
| ! | TGCCATTTCTAAGTACAAAC+TGG | + | chr3_4:72078831-72078850 | Msa0519770:intron | 35.0% |
| GCCATTTCTAAGTACAAACT+GGG | + | chr3_4:72078832-72078851 | Msa0519770:intron | 35.0% | |
| CCATTTCTAAGTACAAACTG+GGG | + | chr3_4:72078833-72078852 | Msa0519770:intron | 35.0% | |
| ACAGAACGCAAACAAAAACT+GGG | - | chr3_4:72079122-72079141 | None:intergenic | 35.0% | |
| AACAGAACGCAAACAAAAAC+TGG | - | chr3_4:72079123-72079142 | None:intergenic | 35.0% | |
| CTATCTCAAATTGATTGAGC+TGG | + | chr3_4:72079335-72079354 | Msa0519770:CDS | 35.0% | |
| GAAACTTAGCAGTGTGTATA+TGG | + | chr3_4:72079372-72079391 | Msa0519770:intron | 35.0% | |
| ! | TCTGAGTGAAACTTTTCCAA+GGG | - | chr3_4:72079605-72079624 | None:intergenic | 35.0% |
| ! | ATCTGAGTGAAACTTTTCCA+AGG | - | chr3_4:72079606-72079625 | None:intergenic | 35.0% |
| ! | TGCTTATAATTTAGGACGGA+GGG | - | chr3_4:72079705-72079724 | None:intergenic | 35.0% |
| ! | TTGCTTATAATTTAGGACGG+AGG | - | chr3_4:72079706-72079725 | None:intergenic | 35.0% |
| TATGTTATGTAGTGTACGGT+TGG | + | chr3_4:72080304-72080323 | Msa0519770:intron | 35.0% | |
| GTACAAAATGAAAGATGCTC+AGG | + | chr3_4:72080382-72080401 | Msa0519770:CDS | 35.0% | |
| GAAACAACCATCACAAACAA+TGG | - | chr3_4:72080432-72080451 | None:intergenic | 35.0% | |
| CCTTAGGATTACAAAGAGAA+CGG | - | chr3_4:72080466-72080485 | None:intergenic | 35.0% | |
| CTCTCCATCTGATTTACTAT+GGG | - | chr3_4:72080706-72080725 | None:intergenic | 35.0% | |
| ACTCTCCATCTGATTTACTA+TGG | - | chr3_4:72080707-72080726 | None:intergenic | 35.0% | |
| ATGTAGCCAACGTTATCTAA+CGG | + | chr3_4:72080847-72080866 | Msa0519770:intron | 35.0% | |
| CTTATTCCGTTAGATAACGT+TGG | - | chr3_4:72080856-72080875 | None:intergenic | 35.0% | |
| ACCAATAGTCTGTAGAATTC+TGG | + | chr3_4:72080995-72081014 | Msa0519770:intron | 35.0% | |
| TCCAGAATTCTACAGACTAT+TGG | - | chr3_4:72080999-72081018 | None:intergenic | 35.0% | |
| ACTAAGCCAACAAAACAAGA+GGG | - | chr3_4:72081072-72081091 | None:intergenic | 35.0% | |
| AACTAAGCCAACAAAACAAG+AGG | - | chr3_4:72081073-72081092 | None:intergenic | 35.0% | |
| GCGAATTTCTGTACTACTTA+TGG | - | chr3_4:72081172-72081191 | None:intergenic | 35.0% | |
| AAGGTTCCATCTATTTCCAA+TGG | + | chr3_4:72081216-72081235 | Msa0519770:CDS | 35.0% | |
| ! | ATACTTTGCCATTTCACCAT+TGG | - | chr3_4:72081235-72081254 | None:intergenic | 35.0% |
| ACTTTACACTTAGTGAGAAC+AGG | + | chr3_4:72081337-72081356 | Msa0519770:intron | 35.0% | |
| CTTTACACTTAGTGAGAACA+GGG | + | chr3_4:72081338-72081357 | Msa0519770:intron | 35.0% | |
| CTAAGAGTTAGCTGATGATA+AGG | + | chr3_4:72081380-72081399 | Msa0519770:intron | 35.0% | |
| ! | TCAAGGTATTTACAAAGGCT+AGG | - | chr3_4:72081652-72081671 | None:intergenic | 35.0% |
| TTAAGGAATTACCTTACGCA+AGG | - | chr3_4:72081686-72081705 | None:intergenic | 35.0% | |
| ! | ATTTCTTTTCTTGCTGGATC+AGG | - | chr3_4:72081898-72081917 | None:intergenic | 35.0% |
| TGCTTTGATTATCTGAGTCT+TGG | + | chr3_4:72081928-72081947 | Msa0519770:CDS | 35.0% | |
| GCTTTGATTATCTGAGTCTT+GGG | + | chr3_4:72081929-72081948 | Msa0519770:CDS | 35.0% | |
| CTTTGATTATCTGAGTCTTG+GGG | + | chr3_4:72081930-72081949 | Msa0519770:CDS | 35.0% | |
| TTTGATTATCTGAGTCTTGG+GGG | + | chr3_4:72081931-72081950 | Msa0519770:CDS | 35.0% | |
| AAATGAAGAACCAAACTCAG+GGG | - | chr3_4:72082006-72082025 | None:intergenic | 35.0% | |
| GAAATGAAGAACCAAACTCA+GGG | - | chr3_4:72082007-72082026 | None:intergenic | 35.0% | |
| AGAAATGAAGAACCAAACTC+AGG | - | chr3_4:72082008-72082027 | None:intergenic | 35.0% | |
| TACGATTAATCGCTGTAAGT+AGG | + | chr3_4:72082100-72082119 | Msa0519770:intron | 35.0% | |
| !!! | CGCTGTAAGTAGGAATTTTT+TGG | + | chr3_4:72082110-72082129 | Msa0519770:intron | 35.0% |
| !! | AATAATGGGCAAGATGATTC+CGG | - | chr3_4:72082217-72082236 | None:intergenic | 35.0% |
| GATTCCTTCTGCCTTAATAA+TGG | - | chr3_4:72082232-72082251 | None:intergenic | 35.0% | |
| ATACAAATTTATGCAGCTGG+AGG | - | chr3_4:72082300-72082319 | None:intergenic | 35.0% | |
| AAAACAATGCTAGCTCATCT+TGG | - | chr3_4:72082356-72082375 | None:intergenic | 35.0% | |
| AAATTCTTGCAAGACGCAAA+GGG | + | chr3_4:72082667-72082686 | Msa0519770:three_prime_UTR | 35.0% | |
| AACACAACACAAACACAGCA+CGG | + | chr3_4:72077609-72077628 | Msa0519770:five_prime_UTR | 40.0% | |
| TAAATCTGTTGTTGTGGGTC+AGG | + | chr3_4:72078059-72078078 | Msa0519770:intron | 40.0% | |
| AAATCTGTTGTTGTGGGTCA+GGG | + | chr3_4:72078060-72078079 | Msa0519770:intron | 40.0% | |
| ! | TTGTAATTGTAGCGGGGATA+AGG | + | chr3_4:72078379-72078398 | Msa0519770:intron | 40.0% |
| AATGGATATTCCGACAGTCA+CGG | + | chr3_4:72078754-72078773 | Msa0519770:intron | 40.0% | |
| TACTTAGAAATGGCAAGGTG+GGG | - | chr3_4:72078826-72078845 | None:intergenic | 40.0% | |
| GTACTTAGAAATGGCAAGGT+GGG | - | chr3_4:72078827-72078846 | None:intergenic | 40.0% | |
| TGTACTTAGAAATGGCAAGG+TGG | - | chr3_4:72078828-72078847 | None:intergenic | 40.0% | |
| CCCCAGTTTGTACTTAGAAA+TGG | - | chr3_4:72078836-72078855 | None:intergenic | 40.0% | |
| !! | AGTTTGTTAGTTCCCTTACG+AGG | + | chr3_4:72078906-72078925 | Msa0519770:intron | 40.0% |
| ! | GTTTGTTAGTTCCCTTACGA+GGG | + | chr3_4:72078907-72078926 | Msa0519770:intron | 40.0% |
| AGGGTAAAATACCCTCGTAA+GGG | - | chr3_4:72078921-72078940 | None:intergenic | 40.0% | |
| TACAGGGAGCAAAAACAAGA+GGG | - | chr3_4:72078940-72078959 | None:intergenic | 40.0% | |
| ATACAGGGAGCAAAAACAAG+AGG | - | chr3_4:72078941-72078960 | None:intergenic | 40.0% | |
| CTGACTTCTAACTTTCCCTT+TGG | + | chr3_4:72079038-72079057 | Msa0519770:intron | 40.0% | |
| TAACTTTCCCTTTGGTCTCA+AGG | + | chr3_4:72079046-72079065 | Msa0519770:intron | 40.0% | |
| AGTAGAACCTTGAGACCAAA+GGG | - | chr3_4:72079056-72079075 | None:intergenic | 40.0% | |
| TAGTAGAACCTTGAGACCAA+AGG | - | chr3_4:72079057-72079076 | None:intergenic | 40.0% | |
| AAACTGGGAGACAAAAAGAC+AGG | - | chr3_4:72079107-72079126 | None:intergenic | 40.0% | |
| !! | CAAGTTGATTCCTGACATGT+TGG | + | chr3_4:72079156-72079175 | Msa0519770:intron | 40.0% |
| AATGAACCAGACCGAATTGT+TGG | + | chr3_4:72079291-72079310 | Msa0519770:CDS | 40.0% | |
| ! | ATCAATTTGAGATAGCCTCC+AGG | - | chr3_4:72079330-72079349 | None:intergenic | 40.0% |
| ATTGATGCTCAGCAAGTGTT+TGG | + | chr3_4:72079536-72079555 | Msa0519770:CDS | 40.0% | |
| TTGATGCTCAGCAAGTGTTT+GGG | + | chr3_4:72079537-72079556 | Msa0519770:CDS | 40.0% | |
| ! | GTTTGGGTATGCTCTTTTCA+AGG | + | chr3_4:72079553-72079572 | Msa0519770:CDS | 40.0% |
| !! | GGTATGCTCTTTTCAAGGAT+GGG | + | chr3_4:72079558-72079577 | Msa0519770:CDS | 40.0% |
| AAGTTTCACTCAGATATCGC+TGG | + | chr3_4:72079611-72079630 | Msa0519770:CDS | 40.0% | |
| CTGGAAGAAGCTTTCACAAT+GGG | + | chr3_4:72079630-72079649 | Msa0519770:CDS | 40.0% | |
| TTGCTTATAAATTGGGACGG+AGG | + | chr3_4:72079984-72080003 | Msa0519770:intron | 40.0% | |
| TGCTTATAAATTGGGACGGA+GGG | + | chr3_4:72079985-72080004 | Msa0519770:intron | 40.0% | |
| CATTTGACATTGAAAGGCCA+AGG | + | chr3_4:72080123-72080142 | Msa0519770:intron | 40.0% | |
| TGTACCATTCTCTTCGAGTA+GGG | - | chr3_4:72080348-72080367 | None:intergenic | 40.0% | |
| TTGTACCATTCTCTTCGAGT+AGG | - | chr3_4:72080349-72080368 | None:intergenic | 40.0% | |
| CCATCACAAACAATGGTAAG+AGG | - | chr3_4:72080425-72080444 | None:intergenic | 40.0% | |
| CCTCTTACCATTGTTTGTGA+TGG | + | chr3_4:72080422-72080441 | Msa0519770:CDS | 40.0% | |
| CCGTTCTCTTTGTAATCCTA+AGG | + | chr3_4:72080463-72080482 | Msa0519770:CDS | 40.0% | |
| AGAATGTTGCACTTGATGTG+TGG | + | chr3_4:72080557-72080576 | Msa0519770:intron | 40.0% | |
| GAACTTCCATGTGCAAATCA+TGG | + | chr3_4:72081105-72081124 | Msa0519770:CDS | 40.0% | |
| AAATCATGGTCACGTCATAC+TGG | + | chr3_4:72081119-72081138 | Msa0519770:CDS | 40.0% | |
| AATCATGGTCACGTCATACT+GGG | + | chr3_4:72081120-72081139 | Msa0519770:CDS | 40.0% | |
| CTTATGGGATAGAACAGAAC+CGG | - | chr3_4:72081156-72081175 | None:intergenic | 40.0% | |
| TAGTACAGAAATTCGCTGTC+TGG | + | chr3_4:72081176-72081195 | Msa0519770:CDS | 40.0% | |
| ! | GGCAAAGTATTTGAAGACAG+TGG | + | chr3_4:72081245-72081264 | Msa0519770:CDS | 40.0% |
| CATCAGCTAACTCTTAGCTA+AGG | - | chr3_4:72081377-72081396 | None:intergenic | 40.0% | |
| TGTTTGGCATTGTCCTTATG+TGG | - | chr3_4:72081468-72081487 | None:intergenic | 40.0% | |
| GCATCATTCAGGTCAAGTAA+AGG | - | chr3_4:72081628-72081647 | None:intergenic | 40.0% | |
| GCAAGGTATAGAAGGATTCA+AGG | - | chr3_4:72081669-72081688 | None:intergenic | 40.0% | |
| ATCCTTCTATACCTTGCGTA+AGG | + | chr3_4:72081672-72081691 | Msa0519770:CDS | 40.0% | |
| TACCTTACGCAAGGTATAGA+AGG | - | chr3_4:72081677-72081696 | None:intergenic | 40.0% | |
| ! | TGACGCATTTCTTTTCTTGC+TGG | - | chr3_4:72081904-72081923 | None:intergenic | 40.0% |
| !! | CTTGGGGGTTTATTTTCAGA+AGG | + | chr3_4:72081946-72081965 | Msa0519770:CDS | 40.0% |
| AATCCTGAAAGCAAAGAGAC+TGG | - | chr3_4:72081973-72081992 | None:intergenic | 40.0% | |
| AATGAAGAACCAAACTCAGG+GGG | - | chr3_4:72082005-72082024 | None:intergenic | 40.0% | |
| TTCCGATCCATATGCGTTTA+GGG | - | chr3_4:72082080-72082099 | None:intergenic | 40.0% | |
| ATTCCGATCCATATGCGTTT+AGG | - | chr3_4:72082081-72082100 | None:intergenic | 40.0% | |
| TTGCCCATTATTAAGGCAGA+AGG | + | chr3_4:72082225-72082244 | Msa0519770:CDS | 40.0% | |
| TTGCAGGGAAGAACATTTGA+CGG | - | chr3_4:72082254-72082273 | None:intergenic | 40.0% | |
| AATAAGCTGGAACAGTTGCA+GGG | - | chr3_4:72082269-72082288 | None:intergenic | 40.0% | |
| TAATAAGCTGGAACAGTTGC+AGG | - | chr3_4:72082270-72082289 | None:intergenic | 40.0% | |
| CAAATTCTTGCAAGACGCAA+AGG | + | chr3_4:72082666-72082685 | Msa0519770:three_prime_UTR | 40.0% | |
| AATTCTTGCAAGACGCAAAG+GGG | + | chr3_4:72082668-72082687 | Msa0519770:three_prime_UTR | 40.0% | |
| GAAATTGTAGAGTGCAGCGA+GGG | - | chr3_4:72077726-72077745 | None:intergenic | 45.0% | |
| AAAAGATCTGCATTCTCCGG+TGG | - | chr3_4:72077810-72077829 | None:intergenic | 45.0% | |
| ATGATATCAACGTCGCCGTT+TGG | - | chr3_4:72077836-72077855 | None:intergenic | 45.0% | |
| GATATCATCATTGTCGGTGC+TGG | + | chr3_4:72077848-72077867 | Msa0519770:CDS | 45.0% | |
| ACTGTGAATGTCCGTATCCA+TGG | + | chr3_4:72078035-72078054 | Msa0519770:intron | 45.0% | |
| TTGTCGCTGTCTAAGTACAC+CGG | - | chr3_4:72078189-72078208 | None:intergenic | 45.0% | |
| AAGTGTGGTCGGTTACATCA+TGG | - | chr3_4:72078671-72078690 | None:intergenic | 45.0% | |
| ATGTAACCGACCACACTTAG+TGG | + | chr3_4:72078673-72078692 | Msa0519770:intron | 45.0% | |
| TTATCGCCACTAAGTGTGGT+CGG | - | chr3_4:72078682-72078701 | None:intergenic | 45.0% | |
| AACCTTATCGCCACTAAGTG+TGG | - | chr3_4:72078686-72078705 | None:intergenic | 45.0% | |
| CACTTAGTGGCGATAAGGTT+TGG | + | chr3_4:72078686-72078705 | Msa0519770:intron | 45.0% | |
| ATGGATATTCCGACAGTCAC+GGG | + | chr3_4:72078755-72078774 | Msa0519770:intron | 45.0% | |
| ! | GGCAGCAGATTTTTACCCTT+GGG | + | chr3_4:72078777-72078796 | Msa0519770:intron | 45.0% |
| ! | GATTTTTACCCTTGGGAGTG+AGG | + | chr3_4:72078784-72078803 | Msa0519770:intron | 45.0% |
| GAGGGTAAAATACCCTCGTA+AGG | - | chr3_4:72078922-72078941 | None:intergenic | 45.0% | |
| ATCTAATGTAGGATGGACGG+CGG | + | chr3_4:72079244-72079263 | Msa0519770:intron | 45.0% | |
| GTAGCAACTCGCCAACAATT+CGG | - | chr3_4:72079305-72079324 | None:intergenic | 45.0% | |
| TTGATTGAGCTGGGACTTGA+AGG | + | chr3_4:72079345-72079364 | Msa0519770:CDS | 45.0% | |
| TGTGTTCCAGCACTCAAGAT+CGG | - | chr3_4:72079428-72079447 | None:intergenic | 45.0% | |
| !! | GGGTATGCTCTTTTCAAGGA+TGG | + | chr3_4:72079557-72079576 | Msa0519770:CDS | 45.0% |
| GCTGGAAGAAGCTTTCACAA+TGG | + | chr3_4:72079629-72079648 | Msa0519770:CDS | 45.0% | |
| ATTCGTGCGTGCAGAATCAT+TGG | - | chr3_4:72080085-72080104 | None:intergenic | 45.0% | |
| ACTTCCCTACTCGAAGAGAA+TGG | + | chr3_4:72080341-72080360 | Msa0519770:CDS | 45.0% | |
| !! | TAAGGTGTTTTGGGCATGTG+TGG | + | chr3_4:72080665-72080684 | Msa0519770:intron | 45.0% |
| GAGAGTAGCTCAAATCCTAG+AGG | + | chr3_4:72080721-72080740 | Msa0519770:intron | 45.0% | |
| CTCTCTACTCCTATTCTCGT+CGG | + | chr3_4:72080943-72080962 | Msa0519770:intron | 45.0% | |
| CTTTCTGTGTTTGCAGGTAG+AGG | + | chr3_4:72081044-72081063 | Msa0519770:intron | 45.0% | |
| !!! | GAGGTTCCCTCTTGTTTTGT+TGG | + | chr3_4:72081063-72081082 | Msa0519770:CDS | 45.0% |
| ! | ACGTGACCATGATTTGCACA+TGG | - | chr3_4:72081114-72081133 | None:intergenic | 45.0% |
| ATAGATGGAACCTTCTGACC+AGG | - | chr3_4:72081210-72081229 | None:intergenic | 45.0% | |
| CTTGTAGAACCACGAGTAGA+TGG | - | chr3_4:72081285-72081304 | None:intergenic | 45.0% | |
| TGAAAGCAGCATGAAGCTCA+GGG | - | chr3_4:72081426-72081445 | None:intergenic | 45.0% | |
| ATGAAAGCAGCATGAAGCTC+AGG | - | chr3_4:72081427-72081446 | None:intergenic | 45.0% | |
| TTCATAGCTGCAGTGGACAA+AGG | + | chr3_4:72081442-72081461 | Msa0519770:CDS | 45.0% | |
| GAATGCATCTCCCATCAGAA+GGG | - | chr3_4:72081527-72081546 | None:intergenic | 45.0% | |
| TGAATGCATCTCCCATCAGA+AGG | - | chr3_4:72081528-72081547 | None:intergenic | 45.0% | |
| AAAGGCTAGGTGCATCATTC+AGG | - | chr3_4:72081639-72081658 | None:intergenic | 45.0% | |
| GAAGTGGTTGCCTCAGTTTA+AGG | - | chr3_4:72081703-72081722 | None:intergenic | 45.0% | |
| !! | GTATTTATGGTGGATGCCAC+TGG | - | chr3_4:72081838-72081857 | None:intergenic | 45.0% |
| GGCATCCACCATAAATACGT+TGG | + | chr3_4:72081840-72081859 | Msa0519770:CDS | 45.0% | |
| TCCACCATAAATACGTTGGC+AGG | + | chr3_4:72081844-72081863 | Msa0519770:CDS | 45.0% | |
| TCCTGCCAACGTATTTATGG+TGG | - | chr3_4:72081848-72081867 | None:intergenic | 45.0% | |
| TGCTCCTGCCAACGTATTTA+TGG | - | chr3_4:72081851-72081870 | None:intergenic | 45.0% | |
| TTCTTCGCTGTCGCGATATA+TGG | + | chr3_4:72082024-72082043 | Msa0519770:CDS | 45.0% | |
| ATGCGTTTAGGGGAAGGAAA+TGG | - | chr3_4:72082069-72082088 | None:intergenic | 45.0% | |
| TTCCTTCCCCTAAACGCATA+TGG | + | chr3_4:72082070-72082089 | Msa0519770:CDS | 45.0% | |
| ATCCATATGCGTTTAGGGGA+AGG | - | chr3_4:72082075-72082094 | None:intergenic | 45.0% | |
| TCCCCTAAACGCATATGGAT+CGG | + | chr3_4:72082075-72082094 | Msa0519770:CDS | 45.0% | |
| TCCGATCCATATGCGTTTAG+GGG | - | chr3_4:72082079-72082098 | None:intergenic | 45.0% | |
| GCACTCTGCCAAAAGACAAT+TGG | - | chr3_4:72082192-72082211 | None:intergenic | 45.0% | |
| !! | GGAGGTGCTCTATAATAAGC+TGG | - | chr3_4:72082282-72082301 | None:intergenic | 45.0% |
| !!! | TCGCTTATATTTTGGGACGG+AGG | + | chr3_4:72082554-72082573 | Msa0519770:three_prime_UTR | 45.0% |
| !!! | CGCTTATATTTTGGGACGGA+GGG | + | chr3_4:72082555-72082574 | Msa0519770:three_prime_UTR | 45.0% |
| !! | ATAAAATAAAAATAAAACAA+TGG | - | chr3_4:72081022-72081041 | None:intergenic | 5.0% |
| ATTACGTCCAGCGAAGAGAG+AGG | + | chr3_4:72077583-72077602 | Msa0519770:five_prime_UTR | 50.0% | |
| TTACGTCCAGCGAAGAGAGA+GGG | + | chr3_4:72077584-72077603 | Msa0519770:five_prime_UTR | 50.0% | |
| ! | TGTTTTCCCTCTCTCTTCGC+TGG | - | chr3_4:72077593-72077612 | None:intergenic | 50.0% |
| ! | TAGGGGTCGACCATTTTGAG+AGG | - | chr3_4:72077671-72077690 | None:intergenic | 50.0% |
| CTCAAAATGGTCGACCCCTA+CGG | + | chr3_4:72077671-72077690 | Msa0519770:exon | 50.0% | |
| GGAAATTGTAGAGTGCAGCG+AGG | - | chr3_4:72077727-72077746 | None:intergenic | 50.0% | |
| TGGTGGTTGTTGCATCGGAA+TGG | - | chr3_4:72077766-72077785 | None:intergenic | 50.0% | |
| TGTAATGTTCTCAGCGGTGG+TGG | - | chr3_4:72077783-72077802 | None:intergenic | 50.0% | |
| GGTTGTAATGTTCTCAGCGG+TGG | - | chr3_4:72077786-72077805 | None:intergenic | 50.0% | |
| GGCGGTTGTAATGTTCTCAG+CGG | - | chr3_4:72077789-72077808 | None:intergenic | 50.0% | |
| GAGAACATTACAACCGCCAC+CGG | + | chr3_4:72077791-72077810 | Msa0519770:CDS | 50.0% | |
| GTTGTTGTGGGTCAGGGTTT+AGG | + | chr3_4:72078066-72078085 | Msa0519770:intron | 50.0% | |
| GACCACACTTAGTGGCGATA+AGG | + | chr3_4:72078681-72078700 | Msa0519770:intron | 50.0% | |
| TGGATATTCCGACAGTCACG+GGG | + | chr3_4:72078756-72078775 | Msa0519770:intron | 50.0% | |
| ! | GGGCAGCAGATTTTTACCCT+TGG | + | chr3_4:72078776-72078795 | Msa0519770:intron | 50.0% |
| GGGTAATTCCTCACTCCCAA+GGG | - | chr3_4:72078795-72078814 | None:intergenic | 50.0% | |
| AGGGTAATTCCTCACTCCCA+AGG | - | chr3_4:72078796-72078815 | None:intergenic | 50.0% | |
| GTTCTACTATCCAGCTCAGC+TGG | + | chr3_4:72079068-72079087 | Msa0519770:intron | 50.0% | |
| TCTAATGTAGGATGGACGGC+GGG | + | chr3_4:72079245-72079264 | Msa0519770:intron | 50.0% | |
| AACTCGCCAACAATTCGGTC+TGG | - | chr3_4:72079300-72079319 | None:intergenic | 50.0% | |
| CACGAGACTCTCTTATCCCT+TGG | + | chr3_4:72079586-72079605 | Msa0519770:CDS | 50.0% | |
| !! | TTAGGACGGAGGGAGTACTT+GGG | - | chr3_4:72079695-72079714 | None:intergenic | 50.0% |
| !! | TTTAGGACGGAGGGAGTACT+TGG | - | chr3_4:72079696-72079715 | None:intergenic | 50.0% |
| ! | AATTGGGACGGAGGGAGTAT+TGG | + | chr3_4:72079993-72080012 | Msa0519770:intron | 50.0% |
| TGTAGTGTACGGTTGGAGCA+AGG | + | chr3_4:72080311-72080330 | Msa0519770:intron | 50.0% | |
| CATACTGGGAGATCCTTCAC+CGG | + | chr3_4:72081134-72081153 | Msa0519770:CDS | 50.0% | |
| GGATAGAACAGAACCGGTGA+AGG | - | chr3_4:72081150-72081169 | None:intergenic | 50.0% | |
| ! | GGTTGATGTTCCTGGTCAGA+AGG | + | chr3_4:72081197-72081216 | Msa0519770:CDS | 50.0% |
| AAAGCAGCATGAAGCTCAGG+GGG | - | chr3_4:72081424-72081443 | None:intergenic | 50.0% | |
| GAAAGCAGCATGAAGCTCAG+GGG | - | chr3_4:72081425-72081444 | None:intergenic | 50.0% | |
| !! | TGCTGCTTTCATAGCTGCAG+TGG | + | chr3_4:72081435-72081454 | Msa0519770:CDS | 50.0% |
| CAGTGGACAAAGGCCACATA+AGG | + | chr3_4:72081452-72081471 | Msa0519770:CDS | 50.0% | |
| !! | GTTGGCAGGAGCACTTTACA+AGG | + | chr3_4:72081858-72081877 | Msa0519770:CDS | 50.0% |
| GGACCAGTCTCTTTGCTTTC+AGG | + | chr3_4:72081967-72081986 | Msa0519770:CDS | 50.0% | |
| GCTGTCGCGATATATGGTGT+TGG | + | chr3_4:72082030-72082049 | Msa0519770:CDS | 50.0% | |
| ! | GTCTTTTGGCAGAGTGCATC+CGG | + | chr3_4:72082195-72082214 | Msa0519770:intron | 50.0% |
| ATGGTCGACCCCTACGGTTT+CGG | + | chr3_4:72077677-72077696 | Msa0519770:CDS | 55.0% | |
| TGATCCACCCGAAACCGTAG+GGG | - | chr3_4:72077688-72077707 | None:intergenic | 55.0% | |
| GTGATCCACCCGAAACCGTA+GGG | - | chr3_4:72077689-72077708 | None:intergenic | 55.0% | |
| TGTGATCCACCCGAAACCGT+AGG | - | chr3_4:72077690-72077709 | None:intergenic | 55.0% | |
| ! | AGCGGTGGTGGTTGTTGCAT+CGG | - | chr3_4:72077771-72077790 | None:intergenic | 55.0% |
| AGATCTGCATTCTCCGGTGG+CGG | - | chr3_4:72077807-72077826 | None:intergenic | 55.0% | |
| TCCGCTCTCGCTTACACTCT+CGG | + | chr3_4:72077881-72077900 | Msa0519770:CDS | 55.0% | |
| TCTCGCTTACACTCTCGGCA+AGG | + | chr3_4:72077886-72077905 | Msa0519770:CDS | 55.0% | |
| AAGAAGAGGACCAGCTGAGC+TGG | - | chr3_4:72079081-72079100 | None:intergenic | 55.0% | |
| GTTGGCGAGTTGCTACAACC+TGG | + | chr3_4:72079309-72079328 | Msa0519770:CDS | 55.0% | |
| TTCTGGCCGATCTTGAGTGC+TGG | + | chr3_4:72079419-72079438 | Msa0519770:intron | 55.0% | |
| !! | ACGGAGGGAGTACTTGGGAA+GGG | - | chr3_4:72079690-72079709 | None:intergenic | 55.0% |
| !! | GGTGTTTTGGGCATGTGTGG+AGG | + | chr3_4:72080668-72080687 | Msa0519770:intron | 55.0% |
| ! | CGCTGTCTGGTTGATGTTCC+TGG | + | chr3_4:72081189-72081208 | Msa0519770:CDS | 55.0% |
| GAAGACAGTGGTAGCTCCAC+AGG | + | chr3_4:72081257-72081276 | Msa0519770:CDS | 55.0% | |
| CCACGAGTAGATGGTACCTG+TGG | - | chr3_4:72081276-72081295 | None:intergenic | 55.0% | |
| CCACAGGTACCATCTACTCG+TGG | + | chr3_4:72081273-72081292 | Msa0519770:intron | 55.0% | |
| TCGGCTGGCATGCTTCTGTT+TGG | - | chr3_4:72081484-72081503 | None:intergenic | 55.0% | |
| AACATGCGCCATCCCCTAAC+CGG | + | chr3_4:72081547-72081566 | Msa0519770:CDS | 55.0% | |
| ! | GACGGAGGGAGTACATTGCT+GGG | + | chr3_4:72082569-72082588 | Msa0519770:three_prime_UTR | 55.0% |
| CTTGCAAGACGCAAAGGGGA+CGG | + | chr3_4:72082672-72082691 | Msa0519770:three_prime_UTR | 55.0% | |
| TGGTCGACCCCTACGGTTTC+GGG | + | chr3_4:72077678-72077697 | Msa0519770:CDS | 60.0% | |
| GAGTGCAGCGAGGGTGATGA+GGG | - | chr3_4:72077717-72077736 | None:intergenic | 60.0% | |
| AGAGTGCAGCGAGGGTGATG+AGG | - | chr3_4:72077718-72077737 | None:intergenic | 60.0% | |
| !! | ATTGTCGGTGCTGGTGTCGC+CGG | + | chr3_4:72077857-72077876 | Msa0519770:CDS | 60.0% |
| AGTGTAAGCGAGAGCGGAGC+CGG | - | chr3_4:72077879-72077898 | None:intergenic | 60.0% | |
| ! | GCCGAGAGTGTAAGCGAGAG+CGG | - | chr3_4:72077885-72077904 | None:intergenic | 60.0% |
| ATCTGCTGCCCCGTGACTGT+CGG | - | chr3_4:72078767-72078786 | None:intergenic | 60.0% | |
| GGCGAGTTGCTACAACCTGG+AGG | + | chr3_4:72079312-72079331 | Msa0519770:CDS | 60.0% | |
| !! | GAGGGAGTACTTGGGAAGGG+AGG | - | chr3_4:72079687-72079706 | None:intergenic | 60.0% |
| !! | GACGGAGGGAGTACTTGGGA+AGG | - | chr3_4:72079691-72079710 | None:intergenic | 60.0% |
| AGCCGATCCTTATCCCACCC+CGG | + | chr3_4:72081498-72081517 | Msa0519770:CDS | 60.0% | |
| TCCCGGGGTGGGATAAGGAT+CGG | - | chr3_4:72081503-72081522 | None:intergenic | 60.0% | |
| TCTCCCATCAGAAGGGCTCC+CGG | - | chr3_4:72081520-72081539 | None:intergenic | 60.0% | |
| ACATGCGCCATCCCCTAACC+GGG | + | chr3_4:72081548-72081567 | Msa0519770:CDS | 60.0% | |
| AGTCATCCCACCCCCGGTTA+GGG | - | chr3_4:72081563-72081582 | None:intergenic | 60.0% | |
| AAACCCTCGCCCCCTGAGTT+TGG | + | chr3_4:72081993-72082012 | Msa0519770:CDS | 60.0% | |
| GAACCAAACTCAGGGGGCGA+GGG | - | chr3_4:72081999-72082018 | None:intergenic | 60.0% | |
| AGAACCAAACTCAGGGGGCG+AGG | - | chr3_4:72082000-72082019 | None:intergenic | 60.0% | |
| ! | GGACGGAGGGAGTACATTGC+TGG | + | chr3_4:72082568-72082587 | Msa0519770:three_prime_UTR | 60.0% |
| TCGACCCCTACGGTTTCGGG+TGG | + | chr3_4:72077681-72077700 | Msa0519770:CDS | 65.0% | |
| GGCAAGGTGGGGTGTGCACA+GGG | - | chr3_4:72078815-72078834 | None:intergenic | 65.0% | |
| TGGCAAGGTGGGGTGTGCAC+AGG | - | chr3_4:72078816-72078835 | None:intergenic | 65.0% | |
| GGGGTGGGATAAGGATCGGC+TGG | - | chr3_4:72081499-72081518 | None:intergenic | 65.0% | |
| GCCGATCCTTATCCCACCCC+GGG | + | chr3_4:72081499-72081518 | Msa0519770:CDS | 65.0% | |
| ATCAGAAGGGCTCCCGGGGT+GGG | - | chr3_4:72081514-72081533 | None:intergenic | 65.0% | |
| ACCCCGGGAGCCCTTCTGAT+GGG | + | chr3_4:72081514-72081533 | Msa0519770:CDS | 65.0% | |
| TCCCATCAGAAGGGCTCCCG+GGG | - | chr3_4:72081518-72081537 | None:intergenic | 65.0% | |
| CTCCCATCAGAAGGGCTCCC+GGG | - | chr3_4:72081519-72081538 | None:intergenic | 65.0% | |
| CATGCGCCATCCCCTAACCG+GGG | + | chr3_4:72081549-72081568 | Msa0519770:CDS | 65.0% | |
| ATGCGCCATCCCCTAACCGG+GGG | + | chr3_4:72081550-72081569 | Msa0519770:CDS | 65.0% | |
| GTCATCCCACCCCCGGTTAG+GGG | - | chr3_4:72081562-72081581 | None:intergenic | 65.0% | |
| CAGTCATCCCACCCCCGGTT+AGG | - | chr3_4:72081564-72081583 | None:intergenic | 65.0% | |
| AACCGGGGGTGGGATGACTG+TGG | + | chr3_4:72081564-72081583 | Msa0519770:CDS | 65.0% | |
| TGCCACAGTCATCCCACCCC+CGG | - | chr3_4:72081569-72081588 | None:intergenic | 65.0% | |
| AGGGCTCCCGGGGTGGGATA+AGG | - | chr3_4:72081508-72081527 | None:intergenic | 70.0% | |
| CATCAGAAGGGCTCCCGGGG+TGG | - | chr3_4:72081515-72081534 | None:intergenic | 70.0% | |
| CACCCCGGGAGCCCTTCTGA+TGG | + | chr3_4:72081513-72081532 | Msa0519770:CDS | 70.0% | |
| GCCATCCCCTAACCGGGGGT+GGG | + | chr3_4:72081554-72081573 | Msa0519770:CDS | 70.0% | |
| TCCCACCCCCGGTTAGGGGA+TGG | - | chr3_4:72081558-72081577 | None:intergenic | 70.0% | |
| CGCCATCCCCTAACCGGGGG+TGG | + | chr3_4:72081553-72081572 | Msa0519770:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 72077571 | 72082776 | 72077571 | ID=Msa0519770;Name=Msa0519770 |
| chr3_4 | mRNA | 72077571 | 72082776 | 72077571 | ID=Msa0519770-mRNA-1;Parent=Msa0519770;Name=Msa0519770-mRNA-1;_AED=0.11;_eAED=0.11;_QI=106|1|1|1|1|1|8|465|521 |
| chr3_4 | exon | 72077571 | 72077907 | 72077571 | ID=Msa0519770-mRNA-1:exon:19809;Parent=Msa0519770-mRNA-1 |
| chr3_4 | exon | 72079255 | 72079366 | 72079255 | ID=Msa0519770-mRNA-1:exon:19810;Parent=Msa0519770-mRNA-1 |
| chr3_4 | exon | 72079522 | 72079696 | 72079522 | ID=Msa0519770-mRNA-1:exon:19811;Parent=Msa0519770-mRNA-1 |
| chr3_4 | exon | 72080316 | 72080484 | 72080316 | ID=Msa0519770-mRNA-1:exon:19812;Parent=Msa0519770-mRNA-1 |
| chr3_4 | exon | 72081060 | 72081278 | 72081060 | ID=Msa0519770-mRNA-1:exon:19813;Parent=Msa0519770-mRNA-1 |
| chr3_4 | exon | 72081418 | 72081693 | 72081418 | ID=Msa0519770-mRNA-1:exon:19814;Parent=Msa0519770-mRNA-1 |
| chr3_4 | exon | 72081835 | 72082113 | 72081835 | ID=Msa0519770-mRNA-1:exon:19815;Parent=Msa0519770-mRNA-1 |
| chr3_4 | exon | 72082207 | 72082776 | 72082207 | ID=Msa0519770-mRNA-1:exon:19816;Parent=Msa0519770-mRNA-1 |
| chr3_4 | five_prime_UTR | 72077571 | 72077676 | 72077571 | ID=Msa0519770-mRNA-1:five_prime_utr;Parent=Msa0519770-mRNA-1 |
| chr3_4 | CDS | 72077677 | 72077907 | 72077677 | ID=Msa0519770-mRNA-1:cds;Parent=Msa0519770-mRNA-1 |
| chr3_4 | CDS | 72079255 | 72079366 | 72079255 | ID=Msa0519770-mRNA-1:cds;Parent=Msa0519770-mRNA-1 |
| chr3_4 | CDS | 72079522 | 72079696 | 72079522 | ID=Msa0519770-mRNA-1:cds;Parent=Msa0519770-mRNA-1 |
| chr3_4 | CDS | 72080316 | 72080484 | 72080316 | ID=Msa0519770-mRNA-1:cds;Parent=Msa0519770-mRNA-1 |
| chr3_4 | CDS | 72081060 | 72081278 | 72081060 | ID=Msa0519770-mRNA-1:cds;Parent=Msa0519770-mRNA-1 |
| chr3_4 | CDS | 72081418 | 72081693 | 72081418 | ID=Msa0519770-mRNA-1:cds;Parent=Msa0519770-mRNA-1 |
| chr3_4 | CDS | 72081835 | 72082113 | 72081835 | ID=Msa0519770-mRNA-1:cds;Parent=Msa0519770-mRNA-1 |
| chr3_4 | CDS | 72082207 | 72082311 | 72082207 | ID=Msa0519770-mRNA-1:cds;Parent=Msa0519770-mRNA-1 |
| chr3_4 | three_prime_UTR | 72082312 | 72082776 | 72082312 | ID=Msa0519770-mRNA-1:three_prime_utr;Parent=Msa0519770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
