AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0521210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521210 MtrunA17_Chr3g0137421 97.990 199 4 0 63 261 13 211 2.10e-144 403
Msa0521210 MtrunA17_Chr3g0137441 80.500 200 37 1 64 261 14 213 1.40e-116 332
Msa0521210 MtrunA17_Chr3g0137411 66.667 195 63 2 63 255 13 207 3.50e-90 265
Msa0521210 MtrunA17_Chr6g0481911 34.555 191 100 8 74 247 21 203 7.67e-22 90.1
Msa0521210 MtrunA17_Chr6g0482041 33.645 214 107 10 61 248 9 213 1.94e-20 86.7
Msa0521210 MtrunA17_Chr6g0481941 34.197 193 100 8 74 247 21 205 6.30e-20 85.1
Msa0521210 MtrunA17_Chr6g0481961 31.579 209 104 10 67 247 16 213 2.81e-15 72.8
Msa0521210 MtrunA17_Chr7g0269461 30.000 180 112 8 77 246 25 200 7.42e-13 65.9
Msa0521210 MtrunA17_Chr7g0228581 31.633 196 102 12 71 247 20 202 8.56e-13 65.5
Msa0521210 MtrunA17_Chr6g0457121 29.008 131 81 3 18 146 4 124 6.24e-12 61.6
Msa0521210 MtrunA17_Chr6g0452491 31.176 170 103 6 52 212 4 168 8.31e-12 62.8
Msa0521210 MtrunA17_Chr6g0476921 29.570 186 109 8 77 248 26 203 1.01e-11 62.8
Msa0521210 MtrunA17_Chr6g0452521 32.680 153 88 7 77 219 60 207 1.34e-11 62.8
Msa0521210 MtrunA17_Chr6g0482031 28.571 203 114 10 69 247 17 212 9.92e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521210 AT1G73260.1 33.690 187 101 11 78 249 29 207 4.26e-15 72.4
Msa0521210 AT1G73330.1 31.638 177 105 9 79 249 28 194 2.74e-14 70.1
Msa0521210 AT1G17860.1 32.447 188 97 11 74 247 24 195 5.59e-14 68.9
Msa0521210 AT1G73325.1 28.205 195 122 7 64 247 16 203 1.76e-11 62.8

Find 85 sgRNAs with CRISPR-Local

Find 619 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCATTGAGATTCCAATTC+TGG 0.167642 3_4:-73854144 Msa0521210:CDS
AAGTTCTGTCCTTCTGTTCC+TGG 0.220195 3_4:-73853969 Msa0521210:CDS
TAAAGGTTGGATCTGGGTTT+TGG 0.257005 3_4:-73854085 Msa0521210:CDS
TTTAAAAGTCTCCACACTTT+TGG 0.285295 3_4:+73854104 None:intergenic
TTCAAAGCTAGGTTAGGTTT+TGG 0.288274 3_4:-73856484 Msa0521210:CDS
GTGAGCACTGGTGGTGCAGC+TGG 0.296941 3_4:-73854059 Msa0521210:CDS
TTCAAGATTGAGAGGCTTGC+AGG 0.297937 3_4:-73854020 Msa0521210:CDS
TGGCCGTCGCCGGAGGGTTG+AGG 0.327520 3_4:+73863871 None:intergenic
TTATTATGTATTTCCACTTT+GGG 0.342016 3_4:-73854306 Msa0521210:CDS
CCATCTCTCTACCCATTCTT+AGG 0.370256 3_4:-73863915 Msa0521210:CDS
CCAGTTTATTTCTCTGCATC+AGG 0.372005 3_4:-73854197 Msa0521210:CDS
TTGCAAGGACTACCCAGAAT+TGG 0.380957 3_4:+73854131 None:intergenic
GTTATTATGTATTTCCACTT+TGG 0.390718 3_4:-73854307 Msa0521210:CDS
ACTGGTGTGCCAATTGCATC+AGG 0.400173 3_4:+73854215 None:intergenic
TAATGTTATGCCTCCATTGT+CGG 0.403372 3_4:+73854283 None:intergenic
TGCCAATTGCATCAGGGTTA+CGG 0.410323 3_4:+73854222 None:intergenic
ATGGAGCCGTCGGAGAGAAT+TGG 0.415812 3_4:+73863960 None:intergenic
CCTGATGCAGAGAAATAAAC+TGG 0.432071 3_4:+73854197 None:intergenic
GGCCGTCGCCGGAGGGTTGA+GGG 0.432636 3_4:+73863872 None:intergenic
ACCATTGAGATTCCAATTCT+GGG 0.437900 3_4:-73854143 Msa0521210:CDS
TTCTGAAATCTAACATAGTA+AGG 0.445442 3_4:+73853867 None:intergenic
GGTGTTCTTTGTGCTCCTGT+TGG 0.451041 3_4:-73853948 Msa0521210:CDS
AACCTAACCTAGCTTTGAAT+CGG 0.455531 3_4:+73856488 None:intergenic
TAGCTGGTGGCCGTCGCCGG+AGG 0.456085 3_4:+73863864 None:intergenic
TGTTTGTCTACTACTGCCTC+TGG 0.457272 3_4:+73854356 None:intergenic
GGATAGCTGGTGGCCGTCGC+CGG 0.464299 3_4:+73863861 None:intergenic
GATTGAACCGATTCAAAGCT+AGG 0.465929 3_4:-73856495 Msa0521210:CDS
GTGAGAGTTGACTGCGAGAA+AGG 0.466207 3_4:+73863840 None:intergenic
ATCCGTAACCCTGATGCAAT+TGG 0.467790 3_4:-73854224 Msa0521210:CDS
AACCGATTCAAAGCTAGGTT+AGG 0.468332 3_4:-73856490 Msa0521210:CDS
ATTATTGCTCTGAGCAAAAG+TGG 0.480580 3_4:+73853839 None:intergenic
TGAGCACTGGTGGTGCAGCT+GGG 0.484946 3_4:-73854058 Msa0521210:CDS
CAAAGAACACCAGGAACAGA+AGG 0.492794 3_4:+73853960 None:intergenic
GACAATGGAGGCATAACATT+AGG 0.494830 3_4:-73854281 Msa0521210:CDS
AGAGATCCGTCGCCTAAGAA+TGG 0.496573 3_4:+73863903 None:intergenic
TTAGAGCGAGTGTGAGAGCT+AGG 0.498229 3_4:-73856441 Msa0521210:CDS
GTATCTACAAAAGTTCCAAC+AGG 0.500409 3_4:+73853933 None:intergenic
CTCCCTCAACCCTCCGGCGA+CGG 0.512394 3_4:-73863874 Msa0521210:CDS
AGCTGGTGGCCGTCGCCGGA+GGG 0.518545 3_4:+73863865 None:intergenic
TAGCGAAAGGGTAGCGTGAG+TGG 0.518828 3_4:+73864005 None:intergenic
TACTGATGGAACTAAAGTTA+TGG 0.520354 3_4:-73853913 Msa0521210:CDS
CATCTCAACCCTCTCTCCGA+TGG 0.526773 3_4:-73863940 Msa0521210:exon
CTCTACCCATTCTTAGGCGA+CGG 0.530365 3_4:-73863909 Msa0521210:CDS
TCTGGTTCAGCTCCTTGTAG+TGG 0.532299 3_4:+73854374 None:intergenic
TTACTATGTTAGATTTCAGA+AGG 0.535320 3_4:-73853865 Msa0521210:CDS
GAGATCCGTCGCCTAAGAAT+GGG 0.536035 3_4:+73863904 None:intergenic
ATCTCTCCAATTCTCTCCGA+CGG 0.537216 3_4:-73863966 Msa0521210:five_prime_UTR
AGATGGAGCCATCGGAGAGA+GGG 0.537383 3_4:+73863932 None:intergenic
ACCCAGAATTGGAATCTCAA+TGG 0.539803 3_4:+73854142 None:intergenic
GCGAGTGTGAGAGCTAGGTT+AGG 0.546553 3_4:-73856436 Msa0521210:intron
GAGCACTGGTGGTGCAGCTG+GGG 0.547443 3_4:-73854057 Msa0521210:CDS
CCGGAGGGTTGAGGGAGAGA+TGG 0.547665 3_4:+73863880 None:intergenic
CCACTTTGGGCCGACAATGG+AGG 0.549557 3_4:-73854293 Msa0521210:CDS
AACCTTCACCTGGTTGAAGA+GGG 0.550922 3_4:+73854327 None:intergenic
GAGAGAATTGGAGAGATAGC+TGG 0.551044 3_4:+73863972 None:intergenic
ATGGTGAGATCAGTGAGAGT+TGG 0.553098 3_4:+73854161 None:intergenic
CCTAAGAATGGGTAGAGAGA+TGG 0.553827 3_4:+73863915 None:intergenic
TAACCTTCACCTGGTTGAAG+AGG 0.554679 3_4:+73854326 None:intergenic
TGACTGCGAGAAAGGATAGC+TGG 0.555155 3_4:+73863848 None:intergenic
TTTCCACTTTGGGCCGACAA+TGG 0.555677 3_4:-73854296 Msa0521210:CDS
CCATCTCTCCCTCAACCCTC+CGG 0.561901 3_4:-73863880 Msa0521210:CDS
GAGGGTTGAGATGGAGCCGT+CGG 0.563783 3_4:+73863950 None:intergenic
CATCGGAGAGAGGGTTGAGA+TGG 0.566108 3_4:+73863941 None:intergenic
TGGTGGCCGTCGGTAGCGAA+AGG 0.567417 3_4:+73863992 None:intergenic
TTAGCAAGTTCAAGATTGAG+AGG 0.571309 3_4:-73854028 Msa0521210:CDS
TTCAACACAAAGCCACTACA+AGG 0.573110 3_4:-73854386 Msa0521210:CDS
CCTCCATTGTCGGCCCAAAG+TGG 0.575834 3_4:+73854293 None:intergenic
GGTGGCCGTCGGTAGCGAAA+GGG 0.584982 3_4:+73863993 None:intergenic
AACCCTCTTCAACCAGGTGA+AGG 0.586328 3_4:-73854329 Msa0521210:CDS
GGGTAGAGAGATGGAGCCAT+CGG 0.588019 3_4:+73863924 None:intergenic
GAGAGATAGCTGGTGGCCGT+CGG 0.589230 3_4:+73863982 None:intergenic
CAAGGTAACCCTCTTCAACC+AGG 0.592964 3_4:-73854335 Msa0521210:CDS
GGAACTAAAGTTATGGCTGT+TGG 0.601998 3_4:-73853906 Msa0521210:CDS
GAGATGGAGCCATCGGAGAG+AGG 0.603487 3_4:+73863931 None:intergenic
AAAGTTATGGCTGTTGGTGA+TGG 0.608662 3_4:-73853900 Msa0521210:CDS
ACAGGAGCACAAAGAACACC+AGG 0.612028 3_4:+73853951 None:intergenic
CGCTACCCTTTCGCTACCGA+CGG 0.612505 3_4:-73863998 Msa0521210:five_prime_UTR
CTGGTGTGCCAATTGCATCA+GGG 0.645208 3_4:+73854216 None:intergenic
CTTGCAATGAACCAAAAGTG+TGG 0.645641 3_4:-73854115 Msa0521210:CDS
ACTACAAGGAGCTGAACCAG+AGG 0.651073 3_4:-73854372 Msa0521210:CDS
GGGTTACGGATTACGTCAAG+AGG 0.654762 3_4:+73854236 None:intergenic
AATACATAATAACCTTCACC+TGG 0.663956 3_4:+73854317 None:intergenic
AGAATTGGAGAGATAGCTGG+TGG 0.682897 3_4:+73863975 None:intergenic
CTGCGAGAAAGGATAGCTGG+TGG 0.703464 3_4:+73863851 None:intergenic
GAGGCAGTAGTAGACAAACA+AGG 0.729599 3_4:-73854353 Msa0521210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAATTATTTGTTCAA+TGG + chr3_4:73856065-73856084 None:intergenic 10.0%
!! ATTGTAAAACAATTTATTTA+TGG + chr3_4:73857409-73857428 None:intergenic 10.0%
!! TATAATTTATGAAAAAATAG+TGG - chr3_4:73857674-73857693 Msa0521210:intron 10.0%
!! CATTATAATATACATATATT+AGG - chr3_4:73860127-73860146 Msa0521210:intron 10.0%
!!! AATATGTAAATTATTTTACA+CGG + chr3_4:73861838-73861857 None:intergenic 10.0%
!!! ACAATAATTAAGTTATTTTG+AGG - chr3_4:73854198-73854217 Msa0521210:CDS 15.0%
!! TACTATATAATCACTAAAAA+AGG + chr3_4:73854646-73854665 None:intergenic 15.0%
!! TTAGTGATTATATAGTAAAT+AGG - chr3_4:73854649-73854668 Msa0521210:intron 15.0%
!! TAGTGATTATATAGTAAATA+GGG - chr3_4:73854650-73854669 Msa0521210:intron 15.0%
!! ATTCAATAGTTGTTAAAAAA+TGG + chr3_4:73854873-73854892 None:intergenic 15.0%
!!! ATCATTTTTACTATAAGAAT+TGG + chr3_4:73854912-73854931 None:intergenic 15.0%
!!! AAAATCAAATTTTTAATCAG+TGG + chr3_4:73856193-73856212 None:intergenic 15.0%
!! ACATTATAAGACATATAAAA+GGG + chr3_4:73856671-73856690 None:intergenic 15.0%
!! AACATTATAAGACATATAAA+AGG + chr3_4:73856672-73856691 None:intergenic 15.0%
!!! TTACTCTTTTAATAAAAAGT+GGG - chr3_4:73856940-73856959 Msa0521210:intron 15.0%
!! CATAATTTATGAAAAAATAG+TGG - chr3_4:73857038-73857057 Msa0521210:intron 15.0%
!! TCTAATTTATGAAAAAATAG+TGG - chr3_4:73857250-73857269 Msa0521210:intron 15.0%
!! TAAAACAATTTATTTATGGT+TGG + chr3_4:73857405-73857424 None:intergenic 15.0%
!! ATTGTAAATCAAGTTATTTA+TGG + chr3_4:73857621-73857640 None:intergenic 15.0%
!! TAAATAACTTGATTTACAAT+CGG - chr3_4:73857621-73857640 Msa0521210:intron 15.0%
!! AAACGAAATTATTTACATAT+GGG + chr3_4:73857756-73857775 None:intergenic 15.0%
!! AAAACGAAATTATTTACATA+TGG + chr3_4:73857757-73857776 None:intergenic 15.0%
!!! TATGTAAATAATTTCGTTTT+AGG - chr3_4:73857757-73857776 Msa0521210:intron 15.0%
!! ATTGTAAAATAGGTTATTTA+TGG + chr3_4:73857833-73857852 None:intergenic 15.0%
!! TCTAATTTATGAAAAAATAG+TGG - chr3_4:73857250-73857269 Msa0521210:intron 15.0%
!!! ATTGTAAAACATGTTATTTA+TGG + chr3_4:73858045-73858064 None:intergenic 15.0%
!!! TAAATAACATGTTTTACAAT+CGG - chr3_4:73858045-73858064 Msa0521210:intron 15.0%
!! TCTAATTTATGAAAAAATAG+TGG - chr3_4:73857250-73857269 Msa0521210:intron 15.0%
!!! ACATTTTATTACATGTTTAA+TGG + chr3_4:73858274-73858293 None:intergenic 15.0%
!!! AAATTTCTAAAAAATGGATT+AGG + chr3_4:73858488-73858507 None:intergenic 15.0%
!!! TTTCACAAATTTCTAAAAAA+TGG + chr3_4:73858494-73858513 None:intergenic 15.0%
!! AACAGCAAAAAAAAAAAAAA+AGG - chr3_4:73859840-73859859 Msa0521210:intron 15.0%
!! AAAAAAAAAAAAAAGGACTA+AGG - chr3_4:73859847-73859866 Msa0521210:intron 15.0%
!!! TCTGATATTTTCTATTTTAT+TGG + chr3_4:73859939-73859958 None:intergenic 15.0%
!!! ATGTTTTTTTAAGAATGTTT+AGG + chr3_4:73861168-73861187 None:intergenic 15.0%
!! TCAAATAAAAGTTAAGAATT+CGG + chr3_4:73861812-73861831 None:intergenic 15.0%
!! TAGAAAAATATAGTTTAAAG+AGG + chr3_4:73861977-73861996 None:intergenic 15.0%
!! AATATAATTTATATGATTGC+TGG - chr3_4:73862005-73862024 Msa0521210:intron 15.0%
!!! ATTTTCAATTAAGTAATTCT+AGG + chr3_4:73862074-73862093 None:intergenic 15.0%
!! AAAAATTATTTAATATGGGA+CGG + chr3_4:73862309-73862328 None:intergenic 15.0%
!! AAAAAAATAGCAATAAAATG+AGG + chr3_4:73862861-73862880 None:intergenic 15.0%
!!! TTTATTGCTATTTTTTTCTT+TGG - chr3_4:73862864-73862883 Msa0521210:intron 15.0%
!!! TTATTGCTATTTTTTTCTTT+GGG - chr3_4:73862865-73862884 Msa0521210:intron 15.0%
!!! CTACTTTAAAATGAAATTTT+GGG + chr3_4:73863206-73863225 None:intergenic 15.0%
!!! ACTACTTTAAAATGAAATTT+TGG + chr3_4:73863207-73863226 None:intergenic 15.0%
!!! TTTTACACTTTATGCTTTTA+TGG - chr3_4:73854052-73854071 Msa0521210:CDS 20.0%
!!! TTTACACTTTATGCTTTTAT+GGG - chr3_4:73854053-73854072 Msa0521210:CDS 20.0%
!! TACACAAATATGAAAACTAT+TGG + chr3_4:73854088-73854107 None:intergenic 20.0%
!!! GTTTTCATATTTGTGTAAAT+CGG - chr3_4:73854091-73854110 Msa0521210:CDS 20.0%
!!! TTTGGTATATGGATTAAATA+GGG - chr3_4:73854712-73854731 Msa0521210:intron 20.0%
!! TAGTGATTAAATAGTAAACA+TGG - chr3_4:73854751-73854770 Msa0521210:intron 20.0%
!!! AAAAGTCTTCATTTTTTTAC+TGG + chr3_4:73855002-73855021 None:intergenic 20.0%
!! TGATTATATTAATGAGTTTG+TGG - chr3_4:73855432-73855451 Msa0521210:intron 20.0%
!!! TGCACATAACATTTTTTTTT+TGG - chr3_4:73855513-73855532 Msa0521210:intron 20.0%
!! TATACAGTGATGAATTTATT+TGG - chr3_4:73855780-73855799 Msa0521210:intron 20.0%
!! AATTAGACTTTCATTTATAG+AGG - chr3_4:73855943-73855962 Msa0521210:intron 20.0%
!! CTTAAGAAAATAACAATAGA+AGG + chr3_4:73856128-73856147 None:intergenic 20.0%
!! ATTTACAAATTTCCTACAAA+GGG + chr3_4:73856390-73856409 None:intergenic 20.0%
!! AATTTACAAATTTCCTACAA+AGG + chr3_4:73856391-73856410 None:intergenic 20.0%
!! GAAATTTGTAAATTAGTGAT+AGG - chr3_4:73856397-73856416 Msa0521210:intron 20.0%
!! AACAAAATGATAATATCTTC+CGG + chr3_4:73856483-73856502 None:intergenic 20.0%
!!! TTTTTGTATGTAATGATGTT+TGG - chr3_4:73856519-73856538 Msa0521210:intron 20.0%
!! GATGTTTGGTAAAAAAAAAT+AGG - chr3_4:73856533-73856552 Msa0521210:intron 20.0%
!!! TATCACCTTATAATTTTACA+AGG + chr3_4:73856878-73856897 None:intergenic 20.0%
!!! GTTACTCTTTTAATAAAAAG+TGG - chr3_4:73856939-73856958 Msa0521210:intron 20.0%
!! CAAGTTATTTATGTTTGAAA+AGG + chr3_4:73857188-73857207 None:intergenic 20.0%
!! ATATAAACTAGCCAAATATA+TGG + chr3_4:73857307-73857326 None:intergenic 20.0%
!! TCTAATTTATGAAAGAATAG+TGG - chr3_4:73857462-73857481 Msa0521210:intron 20.0%
!! ATATAAACTAGCCAAATATA+TGG + chr3_4:73857307-73857326 None:intergenic 20.0%
!! TAAATCAAGTTATTTATGGT+TGG + chr3_4:73857617-73857636 None:intergenic 20.0%
!! TAAAATAGGTTATTTATGGT+TGG + chr3_4:73857829-73857848 None:intergenic 20.0%
!! ATATAAACTAGCCAAATATA+TGG + chr3_4:73857307-73857326 None:intergenic 20.0%
!! AAACGAAATTAATTACATCT+GGG + chr3_4:73857968-73857987 None:intergenic 20.0%
!! AAAACGAAATTAATTACATC+TGG + chr3_4:73857969-73857988 None:intergenic 20.0%
!!! GATGTAATTAATTTCGTTTT+AGG - chr3_4:73857969-73857988 Msa0521210:intron 20.0%
!!! TAAAACATGTTATTTATGGT+TGG + chr3_4:73858041-73858060 None:intergenic 20.0%
!!! TTTTATTACATGTTTAATGG+TGG + chr3_4:73858271-73858290 None:intergenic 20.0%
!! ATGTAATAAAATGTTGTTGA+AGG - chr3_4:73858280-73858299 Msa0521210:intron 20.0%
!!! GAATGAGATTTAGATATTTT+TGG + chr3_4:73858718-73858737 None:intergenic 20.0%
!! AAAAGAAAGAATATAGTTAC+AGG - chr3_4:73858981-73859000 Msa0521210:intron 20.0%
!! TAATAATTTCATGTTTGTCT+TGG - chr3_4:73859178-73859197 Msa0521210:intron 20.0%
!! AAATTATTAGAGATGTGAAA+TGG + chr3_4:73859511-73859530 None:intergenic 20.0%
!! TTTCCTCAACATAATTTAAA+GGG + chr3_4:73859668-73859687 None:intergenic 20.0%
!!! GTTTCTTTTCAATTTAATGA+TGG + chr3_4:73859810-73859829 None:intergenic 20.0%
!!! TATTTATTTCTTGAGCATTT+TGG - chr3_4:73859880-73859899 Msa0521210:intron 20.0%
!! ATATAATGTTTACTAGTGAT+TGG + chr3_4:73860256-73860275 None:intergenic 20.0%
!!! TTAATTTGATTTAACAACCA+GGG + chr3_4:73860283-73860302 None:intergenic 20.0%
!!! TTTAATTTGATTTAACAACC+AGG + chr3_4:73860284-73860303 None:intergenic 20.0%
!!! TTACACATTTTATCAAGATT+GGG + chr3_4:73860623-73860642 None:intergenic 20.0%
!! TGTGTAAGATATTATCTATA+CGG - chr3_4:73860636-73860655 Msa0521210:intron 20.0%
!! CTTGAATGATAAAATAACAT+TGG - chr3_4:73860825-73860844 Msa0521210:intron 20.0%
!!! GTATTTTGGAGTTTTTATAT+GGG - chr3_4:73860872-73860891 Msa0521210:intron 20.0%
!!! TAGTTTAAAATAGCATTACA+TGG - chr3_4:73861719-73861738 Msa0521210:intron 20.0%
!!! TTCGGCTTTTATTTAAAAAA+TGG + chr3_4:73861794-73861813 None:intergenic 20.0%
!!! TTTTTTTTTCAAGTGAGAAA+AGG + chr3_4:73861882-73861901 None:intergenic 20.0%
!! TTCATTTATCTCATAACAAA+CGG + chr3_4:73862037-73862056 None:intergenic 20.0%
!! AAAATTATTTAATATGGGAC+GGG + chr3_4:73862308-73862327 None:intergenic 20.0%
!!! TTATTTGTTAAACTGATTGT+GGG + chr3_4:73862422-73862441 None:intergenic 20.0%
!!! TTTATTTGTTAAACTGATTG+TGG + chr3_4:73862423-73862442 None:intergenic 20.0%
!!! AATTTTCATAATGATTTTCC+TGG + chr3_4:73862929-73862948 None:intergenic 20.0%
!! ATTTATCAATATAACCTCAT+CGG + chr3_4:73863046-73863065 None:intergenic 20.0%
!! AGGTTATATTGATAAATTAC+TGG - chr3_4:73863049-73863068 Msa0521210:intron 20.0%
!! TTATTATGTATTTCCACTTT+GGG - chr3_4:73863531-73863550 Msa0521210:intron 20.0%
!!! GTTTAGATGATGTTTTAATC+TGG - chr3_4:73854113-73854132 Msa0521210:CDS 25.0%
! TGTTTATGATATAGTTGTAC+AGG - chr3_4:73854319-73854338 Msa0521210:CDS 25.0%
!!! CTTATTTGCTCTTTTGATTT+TGG - chr3_4:73854373-73854392 Msa0521210:CDS 25.0%
! CAGTTTAAATCAAAACAAGA+TGG + chr3_4:73854419-73854438 None:intergenic 25.0%
! TGATTTAAACTGCATAATGA+AGG - chr3_4:73854427-73854446 Msa0521210:intron 25.0%
! AATGTTATCAGTTTGGTATA+TGG - chr3_4:73854701-73854720 Msa0521210:intron 25.0%
!! GTTTGGTATATGGATTAAAT+AGG - chr3_4:73854711-73854730 Msa0521210:intron 25.0%
! AACATGGAACTTTATATAGA+TGG - chr3_4:73854767-73854786 Msa0521210:intron 25.0%
! CTTATAGATTTATAGCAACA+TGG - chr3_4:73854809-73854828 Msa0521210:intron 25.0%
! CATCTTTCTTGTATTATGTA+AGG - chr3_4:73854935-73854954 Msa0521210:intron 25.0%
! GAGTTTAGCAATACTATTTA+TGG + chr3_4:73855042-73855061 None:intergenic 25.0%
! CAACAACATAACATCTTAAT+AGG + chr3_4:73855141-73855160 None:intergenic 25.0%
! CTATTAAGATGTTATGTTGT+TGG - chr3_4:73855139-73855158 Msa0521210:intron 25.0%
! AAGACATGCTAAATAATTAG+AGG + chr3_4:73855316-73855335 None:intergenic 25.0%
! TTATGTGCAAATATATTGCT+TGG + chr3_4:73855502-73855521 None:intergenic 25.0%
!!! ATTGCTTTTTTAGCATCATT+GGG - chr3_4:73855704-73855723 Msa0521210:intron 25.0%
! CATATTGAAAAGCTTGAATA+AGG + chr3_4:73855830-73855849 None:intergenic 25.0%
! AATCGTGAAACAAAACAAAA+AGG - chr3_4:73855864-73855883 Msa0521210:intron 25.0%
! TGCAATATCTTAACACAAAA+AGG + chr3_4:73855915-73855934 None:intergenic 25.0%
! CTTGATTATTATGCAAAAGT+TGG - chr3_4:73856010-73856029 Msa0521210:intron 25.0%
!! ATTAACATTGATGCATTTTC+AGG - chr3_4:73856162-73856181 Msa0521210:intron 25.0%
! TTAGATCAATTGAATTCTCT+AGG - chr3_4:73856274-73856293 Msa0521210:intron 25.0%
!! GTTACTCTTTTGATAAAAAG+TGG - chr3_4:73856555-73856574 Msa0521210:intron 25.0%
! TTACACCTTTGATAAAAAGT+GGG - chr3_4:73856751-73856770 Msa0521210:intron 25.0%
!! AATTTTACAAGGCACATAAA+AGG + chr3_4:73856867-73856886 None:intergenic 25.0%
! ATGTGCCTTGTAAAATTATA+AGG - chr3_4:73856870-73856889 Msa0521210:intron 25.0%
! TAATAAAAAGTGGGTAAAGA+CGG - chr3_4:73856949-73856968 Msa0521210:intron 25.0%
! AGATAAACTAGCCAAATATA+TGG + chr3_4:73857095-73857114 None:intergenic 25.0%
! GGTTATACATACCATATATT+TGG - chr3_4:73857293-73857312 Msa0521210:intron 25.0%
!! GGTGTAAATAATATCGTTTT+AGG - chr3_4:73857333-73857352 Msa0521210:intron 25.0%
! CAATTTATTTATGGTTGGAA+AGG + chr3_4:73857400-73857419 None:intergenic 25.0%
! GGTTATACAAACCATATATT+TGG - chr3_4:73857505-73857524 Msa0521210:intron 25.0%
! AAACGATATTATTTACACGT+GGG + chr3_4:73857544-73857563 None:intergenic 25.0%
! AAAACGATATTATTTACACG+TGG + chr3_4:73857545-73857564 None:intergenic 25.0%
!! CGTGTAAATAATATCGTTTT+AGG - chr3_4:73857545-73857564 Msa0521210:intron 25.0%
!! AAACTTGTCGATTGTAAAAT+AGG + chr3_4:73857843-73857862 None:intergenic 25.0%
! AAGATAACTAGCCAAATATA+TGG + chr3_4:73858155-73858174 None:intergenic 25.0%
! AAACGATATTATTTACTCCT+GGG + chr3_4:73858179-73858198 None:intergenic 25.0%
! AAAACGATATTATTTACTCC+TGG + chr3_4:73858180-73858199 None:intergenic 25.0%
!! GGAGTAAATAATATCGTTTT+AGG - chr3_4:73858180-73858199 Msa0521210:intron 25.0%
!! ATTAACTTTCCAGAATCTTT+TGG - chr3_4:73858451-73858470 Msa0521210:intron 25.0%
!!! TTTCTAAAAAATGGATTAGG+AGG + chr3_4:73858485-73858504 None:intergenic 25.0%
!!! ATCTTTGTTTTTGTCTTCAT+CGG - chr3_4:73858592-73858611 Msa0521210:intron 25.0%
! GAAACTAAAATGCATAAAAG+TGG - chr3_4:73859037-73859056 Msa0521210:intron 25.0%
! GAAATTATTACATCGAAATC+AGG + chr3_4:73859168-73859187 None:intergenic 25.0%
! TTCCAATAATGATATGTAAC+TGG - chr3_4:73859213-73859232 Msa0521210:intron 25.0%
! TTCCAGTTACATATCATTAT+TGG + chr3_4:73859218-73859237 None:intergenic 25.0%
! TTACTGAAATGTTGGATTAA+AGG - chr3_4:73859291-73859310 Msa0521210:intron 25.0%
!! ATCTATACGACATATTTTGT+TGG - chr3_4:73859579-73859598 Msa0521210:intron 25.0%
! CTTTCCTCAACATAATTTAA+AGG + chr3_4:73859669-73859688 None:intergenic 25.0%
! CTTTAAATTATGTTGAGGAA+AGG - chr3_4:73859667-73859686 Msa0521210:intron 25.0%
! TATCATGTAGCTTATATTTG+AGG + chr3_4:73859983-73860002 None:intergenic 25.0%
! GCTACATGATATAATCAAAA+AGG - chr3_4:73859992-73860011 Msa0521210:intron 25.0%
!!! AAATTTGGTTTTCGTATATC+TGG + chr3_4:73860022-73860041 None:intergenic 25.0%
! AACCAAATTTGACATTATCA+AGG - chr3_4:73860032-73860051 Msa0521210:intron 25.0%
! GTAAACATTATATAATTCCC+TGG - chr3_4:73860263-73860282 Msa0521210:intron 25.0%
! TCAAATTAAAGAACAAGCTA+AGG - chr3_4:73860294-73860313 Msa0521210:intron 25.0%
! AACAAACAACTGTGAATTTA+TGG - chr3_4:73860333-73860352 Msa0521210:intron 25.0%
!! CTTACACATTTTATCAAGAT+TGG + chr3_4:73860624-73860643 None:intergenic 25.0%
! ATAAAAACTCCAAAATACGT+AGG + chr3_4:73860870-73860889 None:intergenic 25.0%
!!! CGTATTTTGGAGTTTTTATA+TGG - chr3_4:73860871-73860890 Msa0521210:intron 25.0%
! TGATAACTTCATTACTTCTA+AGG - chr3_4:73860944-73860963 Msa0521210:intron 25.0%
! GAAAAAAAATGCAAAGATGA+AGG + chr3_4:73861930-73861949 None:intergenic 25.0%
! TCATTTATCTCATAACAAAC+GGG + chr3_4:73862036-73862055 None:intergenic 25.0%
! TGAGATAAATGAAAAACTGT+TGG - chr3_4:73862044-73862063 Msa0521210:intron 25.0%
!! TATTTGTTAAACTGATTGTG+GGG + chr3_4:73862421-73862440 None:intergenic 25.0%
!!! GTTTAATTTGGACATGTTTA+TGG + chr3_4:73863289-73863308 None:intergenic 25.0%
!!! TCATTGTTTCTTGATTGTTT+TGG + chr3_4:73863390-73863409 None:intergenic 25.0%
! GTTATTATGTATTTCCACTT+TGG - chr3_4:73863530-73863549 Msa0521210:intron 25.0%
!!! TTCTGAAATCTAACATAGTA+AGG + chr3_4:73863973-73863992 None:intergenic 25.0%
! TTACTATGTTAGATTTCAGA+AGG - chr3_4:73863972-73863991 Msa0521210:five_prime_UTR 25.0%
TGATATAGTTGTACAGGAAA+TGG - chr3_4:73854325-73854344 Msa0521210:CDS 30.0%
ACTGCTAAATGTTATCAGTT+TGG - chr3_4:73854694-73854713 Msa0521210:intron 30.0%
TATGTGATCATGAAATTGCA+GGG + chr3_4:73855064-73855083 None:intergenic 30.0%
ATATGTGATCATGAAATTGC+AGG + chr3_4:73855065-73855084 None:intergenic 30.0%
!! AGTGTCTTATTGTTGTCTTT+TGG - chr3_4:73855108-73855127 Msa0521210:intron 30.0%
!! GTGTCTTATTGTTGTCTTTT+GGG - chr3_4:73855109-73855128 Msa0521210:intron 30.0%
ATTTGATGGGATCTACAAAT+GGG - chr3_4:73855166-73855185 Msa0521210:intron 30.0%
! ATTGGGATGATAATTTGTGT+GGG - chr3_4:73855189-73855208 Msa0521210:intron 30.0%
GGTTAAGTTAAGTCATTCTT+TGG - chr3_4:73855210-73855229 Msa0521210:intron 30.0%
TTATGCCTATGAATGATTCA+TGG - chr3_4:73855342-73855361 Msa0521210:intron 30.0%
!! TGTTCAGTTTTGTATTCGTT+CGG - chr3_4:73855472-73855491 Msa0521210:intron 30.0%
TATCTTTCGTTCAACTTCAT+GGG - chr3_4:73855567-73855586 Msa0521210:intron 30.0%
!!! CATTGCTTTTTTAGCATCAT+TGG - chr3_4:73855703-73855722 Msa0521210:intron 30.0%
!!! TTGCTTTTTTAGCATCATTG+GGG - chr3_4:73855705-73855724 Msa0521210:intron 30.0%
ATCACTGTATAAACTAACAG+CGG + chr3_4:73855771-73855790 None:intergenic 30.0%
! TGGATGTAGTTTTCTTTACT+TGG - chr3_4:73855800-73855819 Msa0521210:intron 30.0%
!!! TTGTTTTGTTTCACGATTCA+TGG + chr3_4:73855862-73855881 None:intergenic 30.0%
TGAGCAACTATATTTGTTCT+TGG + chr3_4:73856037-73856056 None:intergenic 30.0%
! TCTCATTTTCACAACTTTCA+TGG + chr3_4:73856232-73856251 None:intergenic 30.0%
AAAATGATAATATCTTCCGG+TGG + chr3_4:73856480-73856499 None:intergenic 30.0%
GTTACACCTTTGATAAAAAG+TGG - chr3_4:73856750-73856769 Msa0521210:intron 30.0%
!!! ATGTACCCACTTTTTATCAA+AGG + chr3_4:73856759-73856778 None:intergenic 30.0%
! ATTATGACTTGTCCTTCTTT+AGG + chr3_4:73857024-73857043 None:intergenic 30.0%
!!! TTGTGTGACCATATTTTAAC+AGG + chr3_4:73857071-73857090 None:intergenic 30.0%
AAACGGGATAATTTATACCT+GGG + chr3_4:73857120-73857139 None:intergenic 30.0%
AAAACGGGATAATTTATACC+TGG + chr3_4:73857121-73857140 None:intergenic 30.0%
! GGTATAAATTATCCCGTTTT+AGG - chr3_4:73857121-73857140 Msa0521210:intron 30.0%
!!! TTGGCTAGTTTATATTTTGC+AGG - chr3_4:73857312-73857331 Msa0521210:intron 30.0%
CAAGTTATTTATGGTTGGAA+AGG + chr3_4:73857612-73857631 None:intergenic 30.0%
! ATTATAACTTGTCCGTCTTT+AGG + chr3_4:73857660-73857679 None:intergenic 30.0%
GTCACGTATTTGTAAAAATG+TGG - chr3_4:73857696-73857715 Msa0521210:intron 30.0%
GGTCACACATATCATATATT+TGG - chr3_4:73857717-73857736 Msa0521210:intron 30.0%
GGTTATACAGACCATATATT+TGG - chr3_4:73858141-73858160 Msa0521210:intron 30.0%
! ATTACATGTTTAATGGTGGA+CGG + chr3_4:73858267-73858286 None:intergenic 30.0%
ATCTCACACACTAATTTCTT+CGG - chr3_4:73858333-73858352 Msa0521210:intron 30.0%
GATTCGATCTTCAAAAATGA+TGG - chr3_4:73858355-73858374 Msa0521210:intron 30.0%
!! ATGGTTCTATTTTGCAGATT+TGG - chr3_4:73858374-73858393 Msa0521210:intron 30.0%
GAATACAAACCAAAAGATTC+TGG + chr3_4:73858463-73858482 None:intergenic 30.0%
GATGAAGACAAAAACAAAGA+TGG + chr3_4:73858593-73858612 None:intergenic 30.0%
ACTGATGTCAAAAACAAAGA+CGG + chr3_4:73858639-73858658 None:intergenic 30.0%
AACCAAAACAATAGTGTAAC+AGG - chr3_4:73858800-73858819 Msa0521210:intron 30.0%
CAACTACACAAGGAAAAATA+TGG + chr3_4:73859083-73859102 None:intergenic 30.0%
TACATATAGTCAACTACACA+AGG + chr3_4:73859093-73859112 None:intergenic 30.0%
TGTGTAGTTGACTATATGTA+TGG - chr3_4:73859093-73859112 Msa0521210:intron 30.0%
!! GGAACATTGATTCAATGAAA+AGG - chr3_4:73859138-73859157 Msa0521210:intron 30.0%
TAACTGCAGAAAATTCTACA+AGG - chr3_4:73859337-73859356 Msa0521210:intron 30.0%
AACTGCAGAAAATTCTACAA+GGG - chr3_4:73859338-73859357 Msa0521210:intron 30.0%
ATCGATACAATTAGAGTCTA+GGG + chr3_4:73859464-73859483 None:intergenic 30.0%
TATCGATACAATTAGAGTCT+AGG + chr3_4:73859465-73859484 None:intergenic 30.0%
GAGATGTGAAATGGATAATT+TGG + chr3_4:73859502-73859521 None:intergenic 30.0%
TACACTTCTTATAAGTACGT+GGG + chr3_4:73859556-73859575 None:intergenic 30.0%
ATACACTTCTTATAAGTACG+TGG + chr3_4:73859557-73859576 None:intergenic 30.0%
CTTCCCTTTAAATTATGTTG+AGG - chr3_4:73859662-73859681 Msa0521210:intron 30.0%
TTCCTGTTAAAATTACAGCA+AGG - chr3_4:73859779-73859798 Msa0521210:intron 30.0%
!! TTCCTTGCTGTAATTTTAAC+AGG + chr3_4:73859784-73859803 None:intergenic 30.0%
!! TTATTTCTTGAGCATTTTGG+CGG - chr3_4:73859883-73859902 Msa0521210:intron 30.0%
! TAGCTTATATTTGAGGTTGT+TGG + chr3_4:73859976-73859995 None:intergenic 30.0%
!! TGCCTTGATAATGTCAAATT+TGG + chr3_4:73860037-73860056 None:intergenic 30.0%
ACTAAAGTTATTCATGTGTG+TGG + chr3_4:73860171-73860190 None:intergenic 30.0%
! ACAGTTGTTTGTTGATTGTA+TGG + chr3_4:73860326-73860345 None:intergenic 30.0%
!!! ATCAAGATTGGGTGTTTTTT+TGG + chr3_4:73860612-73860631 None:intergenic 30.0%
GTAAGTATGTTCAACATTAC+TGG - chr3_4:73860742-73860761 Msa0521210:intron 30.0%
!! ACTTATTAGCCTACGTATTT+TGG - chr3_4:73860858-73860877 Msa0521210:intron 30.0%
!! TAATCTAGTCTTACCAAAAG+AGG - chr3_4:73860914-73860933 Msa0521210:intron 30.0%
! TAACTTCATTACTTCTAAGG+TGG - chr3_4:73860947-73860966 Msa0521210:intron 30.0%
AAACATTATCCAGAACAGAT+TGG - chr3_4:73861182-73861201 Msa0521210:intron 30.0%
AACATTATCCAGAACAGATT+GGG - chr3_4:73861183-73861202 Msa0521210:intron 30.0%
AGAACTCAATATCAGAATCT+CGG + chr3_4:73861250-73861269 None:intergenic 30.0%
! TTCTGATATTGAGTTCTGAT+TGG - chr3_4:73861253-73861272 Msa0521210:intron 30.0%
! TCTGATATTGAGTTCTGATT+GGG - chr3_4:73861254-73861273 Msa0521210:intron 30.0%
TGTAAAATTTGAGAGTGAGA+TGG - chr3_4:73861475-73861494 Msa0521210:intron 30.0%
AGAAAAGGGGAATGAAAATT+TGG - chr3_4:73861523-73861542 Msa0521210:intron 30.0%
GAAAAGGGGAATGAAAATTT+GGG - chr3_4:73861524-73861543 Msa0521210:intron 30.0%
AAAAGGGGAATGAAAATTTG+GGG - chr3_4:73861525-73861544 Msa0521210:intron 30.0%
AATGAATGGGTGATAAAGAA+AGG - chr3_4:73861567-73861586 Msa0521210:intron 30.0%
ATGAATGGGTGATAAAGAAA+GGG - chr3_4:73861568-73861587 Msa0521210:intron 30.0%
TATCAGTCTATCACTATTAG+TGG + chr3_4:73861701-73861720 None:intergenic 30.0%
!! AGATGATGTGTTTTATTGCA+TGG + chr3_4:73861745-73861764 None:intergenic 30.0%
! GAAGGACTTTTGTATTTCTT+TGG + chr3_4:73861912-73861931 None:intergenic 30.0%
TGAAGCGAAATTATGGTAAT+AGG - chr3_4:73862390-73862409 Msa0521210:intron 30.0%
TATGAGAAAAGGAAACTCTT+TGG + chr3_4:73862492-73862511 None:intergenic 30.0%
TATTGTGATGAATCATGGTT+AGG - chr3_4:73862621-73862640 Msa0521210:intron 30.0%
ATGAATCATGGTTAGGTAAA+CGG - chr3_4:73862628-73862647 Msa0521210:intron 30.0%
AACATGACAAAACAATCTTC+CGG + chr3_4:73862746-73862765 None:intergenic 30.0%
! TTCATAACTTGTGAGCAATT+AGG - chr3_4:73862801-73862820 Msa0521210:intron 30.0%
! TCATAACTTGTGAGCAATTA+GGG - chr3_4:73862802-73862821 Msa0521210:intron 30.0%
! TTTTCATAAGGTTGCTCTTT+TGG + chr3_4:73862831-73862850 None:intergenic 30.0%
! TGAGGAGTAAAGTTTTCATA+AGG + chr3_4:73862843-73862862 None:intergenic 30.0%
!!! CTATTTTTTTCTTTGGGTCT+TGG - chr3_4:73862871-73862890 Msa0521210:intron 30.0%
AAAATGACGTAAATACCCAT+TGG - chr3_4:73863010-73863029 Msa0521210:intron 30.0%
! GATAAATTACTGGTGTTTTC+CGG - chr3_4:73863059-73863078 Msa0521210:intron 30.0%
TTTATATAGACATGCATGTC+AGG + chr3_4:73863311-73863330 None:intergenic 30.0%
AATACATAATAACCTTCACC+TGG + chr3_4:73863523-73863542 None:intergenic 30.0%
! TTTAAAAGTCTCCACACTTT+TGG + chr3_4:73863736-73863755 None:intergenic 30.0%
!! AAAAGTGTGGAGACTTTTAA+AGG - chr3_4:73863735-73863754 Msa0521210:intron 30.0%
TACTGATGGAACTAAAGTTA+TGG - chr3_4:73863924-73863943 Msa0521210:CDS 30.0%
ATTGCAGCAGTTTAAGAGTA+TGG + chr3_4:73854269-73854288 None:intergenic 35.0%
ATACTCTTAAACTGCTGCAA+TGG - chr3_4:73854268-73854287 Msa0521210:CDS 35.0%
ACACTCTGCAAAGTATACAA+CGG - chr3_4:73854541-73854560 Msa0521210:intron 35.0%
! ATGTTGTTGGTTGCATTTGA+TGG - chr3_4:73855152-73855171 Msa0521210:intron 35.0%
! TGTTGTTGGTTGCATTTGAT+GGG - chr3_4:73855153-73855172 Msa0521210:intron 35.0%
CATTTGATGGGATCTACAAA+TGG - chr3_4:73855165-73855184 Msa0521210:intron 35.0%
! GATTGGGATGATAATTTGTG+TGG - chr3_4:73855188-73855207 Msa0521210:intron 35.0%
GTTCACCATGAATCATTCAT+AGG + chr3_4:73855350-73855369 None:intergenic 35.0%
GTATCTTTCGTTCAACTTCA+TGG - chr3_4:73855566-73855585 Msa0521210:intron 35.0%
TACTTTGTACTTATGGTTGC+AGG - chr3_4:73855627-73855646 Msa0521210:intron 35.0%
ACTTTGTACTTATGGTTGCA+GGG - chr3_4:73855628-73855647 Msa0521210:intron 35.0%
TGGCTACACATATCTTATCT+TGG - chr3_4:73855662-73855681 Msa0521210:intron 35.0%
GGCTACACATATCTTATCTT+GGG - chr3_4:73855663-73855682 Msa0521210:intron 35.0%
TCACTGTATAAACTAACAGC+GGG + chr3_4:73855770-73855789 None:intergenic 35.0%
CAAAAAGGAACATTGATCGA+AGG + chr3_4:73855900-73855919 None:intergenic 35.0%
ACAAAGAGACTAATGTAGAG+AGG + chr3_4:73855972-73855991 None:intergenic 35.0%
GCTCATTGCAATAACATGTT+TGG - chr3_4:73856099-73856118 Msa0521210:intron 35.0%
!!! ACATTGATGCATTTTCAGGT+TGG - chr3_4:73856166-73856185 Msa0521210:intron 35.0%
GGATACAAGCTTCAACAATT+TGG - chr3_4:73856576-73856595 Msa0521210:intron 35.0%
ATATAAAAGGGACACACTTG+TGG + chr3_4:73856659-73856678 None:intergenic 35.0%
ATGAACTCGCAGATTGTAAA+AGG + chr3_4:73856997-73857016 None:intergenic 35.0%
GGTCACACAAACCATATATT+TGG - chr3_4:73857081-73857100 Msa0521210:intron 35.0%
ATTAGAACTTGTCCGTCTTT+AGG + chr3_4:73857236-73857255 None:intergenic 35.0%
GTCACGCATTTGTAAAATTG+TGG - chr3_4:73857272-73857291 Msa0521210:intron 35.0%
ATTAGAACTTGTCCGTCTTT+AGG + chr3_4:73857236-73857255 None:intergenic 35.0%
GGTCATACAGACCATATATT+TGG - chr3_4:73857929-73857948 Msa0521210:intron 35.0%
GAAGAAATTAGTGTGTGAGA+TGG + chr3_4:73858334-73858353 None:intergenic 35.0%
!!! TGTCTCTTGGTTTTACATTG+TGG + chr3_4:73858517-73858536 None:intergenic 35.0%
TGTAAAACCAAGAGACATTG+TGG - chr3_4:73858520-73858539 Msa0521210:intron 35.0%
GACAAAAACAAAGATGGCAA+AGG + chr3_4:73858587-73858606 None:intergenic 35.0%
TTTGACATCAGTGACAGTTA+TGG - chr3_4:73858647-73858666 Msa0521210:intron 35.0%
TGACCTCCTTAAATGTCAAT+CGG + chr3_4:73858677-73858696 None:intergenic 35.0%
! CACCTGTTACACTATTGTTT+TGG + chr3_4:73858805-73858824 None:intergenic 35.0%
CAAAACAATAGTGTAACAGG+TGG - chr3_4:73858803-73858822 Msa0521210:intron 35.0%
AATGTTGGATTAAAGGTTGC+AGG - chr3_4:73859298-73859317 Msa0521210:intron 35.0%
AGTCTTTATCCTGTTATCAG+TGG + chr3_4:73859395-73859414 None:intergenic 35.0%
CCATCTATCTATCGAATTTG+TGG + chr3_4:73859435-73859454 None:intergenic 35.0%
CCACAAATTCGATAGATAGA+TGG - chr3_4:73859432-73859451 Msa0521210:intron 35.0%
! ATCTGAAGTCATGTTAGAGT+TGG - chr3_4:73859631-73859650 Msa0521210:intron 35.0%
! TCTGAAGTCATGTTAGAGTT+GGG - chr3_4:73859632-73859651 Msa0521210:intron 35.0%
ATATCACATGACACTGACAT+GGG + chr3_4:73859740-73859759 None:intergenic 35.0%
TGTGGCTGTCAATTACTTAA+GGG + chr3_4:73860153-73860172 None:intergenic 35.0%
TGCCTAAAAACACCAAAACT+GGG - chr3_4:73860518-73860537 Msa0521210:intron 35.0%
! TGGCGTTTTATGGTGTTTTT+GGG + chr3_4:73860592-73860611 None:intergenic 35.0%
! TTGGCGTTTTATGGTGTTTT+TGG + chr3_4:73860593-73860612 None:intergenic 35.0%
!!! GGTGTTTTTTTGGCGTTTTA+TGG + chr3_4:73860602-73860621 None:intergenic 35.0%
! TTATCAAACTCAGCCTCTTT+TGG + chr3_4:73860930-73860949 None:intergenic 35.0%
TCACTCAATCTGAACTCAAA+CGG + chr3_4:73861215-73861234 None:intergenic 35.0%
TCAATATCAGAATCTCGGAA+TGG + chr3_4:73861245-73861264 None:intergenic 35.0%
!! AACCTAACCTAGCTTTGAAT+CGG + chr3_4:73861352-73861371 None:intergenic 35.0%
! TTCAAAGCTAGGTTAGGTTT+TGG - chr3_4:73861353-73861372 Msa0521210:intron 35.0%
! TCAAAGCTAGGTTAGGTTTT+GGG - chr3_4:73861354-73861373 Msa0521210:intron 35.0%
! TTTTGGGCAAAGTGAGAAAA+GGG - chr3_4:73861509-73861528 Msa0521210:intron 35.0%
!! CACTTGTTGCATTTTTGTGT+GGG - chr3_4:73861630-73861649 Msa0521210:intron 35.0%
ACTATTAGTGGAGTAGTGAT+TGG + chr3_4:73861689-73861708 None:intergenic 35.0%
! CTTTTCAATCTCAATGTCCT+AGG - chr3_4:73862097-73862116 Msa0521210:intron 35.0%
AACTCTGACGAATTATGGTA+TGG + chr3_4:73862189-73862208 None:intergenic 35.0%
AAAAGTTCGTGATATTCACG+TGG + chr3_4:73862230-73862249 None:intergenic 35.0%
!! ACCTCTTTGAAGCGAAATTA+TGG - chr3_4:73862383-73862402 Msa0521210:intron 35.0%
ACCATAATTTCGCTTCAAAG+AGG + chr3_4:73862387-73862406 None:intergenic 35.0%
CGAAGGCAAATTATGAGAAA+AGG + chr3_4:73862503-73862522 None:intergenic 35.0%
CCATATCTACGATACTTCTA+GGG + chr3_4:73862577-73862596 None:intergenic 35.0%
ACCATATCTACGATACTTCT+AGG + chr3_4:73862578-73862597 None:intergenic 35.0%
TATGGTCATCTAACGTTGAA+AGG - chr3_4:73862592-73862611 Msa0521210:intron 35.0%
GATGGTATTGTGATGAATCA+TGG - chr3_4:73862616-73862635 Msa0521210:intron 35.0%
GTTGCACAAGAAATTGAGAA+TGG + chr3_4:73862660-73862679 None:intergenic 35.0%
AAAAGATGACCACAAATGAG+CGG + chr3_4:73862685-73862704 None:intergenic 35.0%
!! TGTCATGTTTAAAAGCGCTT+TGG - chr3_4:73862757-73862776 Msa0521210:intron 35.0%
TACATAAGGACTTCAAAGGA+GGG + chr3_4:73862897-73862916 None:intergenic 35.0%
TTGCTACATAAGGACTTCAA+AGG + chr3_4:73862901-73862920 None:intergenic 35.0%
TGAAGTCCTTATGTAGCAAA+TGG - chr3_4:73862902-73862921 Msa0521210:intron 35.0%
TGTTGTATACACATGCGATA+AGG - chr3_4:73862948-73862967 Msa0521210:intron 35.0%
!! ATGAAATTTTGGGAACTTCG+TGG + chr3_4:73863196-73863215 None:intergenic 35.0%
CATGCATGTCAGGTTTAATT+TGG + chr3_4:73863301-73863320 None:intergenic 35.0%
TAATGTTATGCCTCCATTGT+CGG + chr3_4:73863557-73863576 None:intergenic 35.0%
ACCATTGAGATTCCAATTCT+GGG - chr3_4:73863694-73863713 Msa0521210:intron 35.0%
!! AGACTTTTAAAGGTTGGATC+TGG - chr3_4:73863745-73863764 Msa0521210:intron 35.0%
!! GACTTTTAAAGGTTGGATCT+GGG - chr3_4:73863746-73863765 Msa0521210:intron 35.0%
TTAGCAAGTTCAAGATTGAG+AGG - chr3_4:73863809-73863828 Msa0521210:intron 35.0%
GTATCTACAAAAGTTCCAAC+AGG + chr3_4:73863907-73863926 None:intergenic 35.0%
! GGAACTTTTGTAGATACTGA+TGG - chr3_4:73863910-73863929 Msa0521210:CDS 35.0%
! ATTATTGCTCTGAGCAAAAG+TGG + chr3_4:73864001-73864020 None:intergenic 35.0%
AGTCTCATGTGAGTATGTTG+AGG - chr3_4:73854154-73854173 Msa0521210:CDS 40.0%
!! ACTGCTGCAATGGATTAGAA+TGG - chr3_4:73854278-73854297 Msa0521210:CDS 40.0%
ATGGGATCTACAAATGGGAT+TGG - chr3_4:73855171-73855190 Msa0521210:intron 40.0%
TGGGATCTACAAATGGGATT+GGG - chr3_4:73855172-73855191 Msa0521210:intron 40.0%
TTCATGGTGAACAAGCTTGT+AGG - chr3_4:73855358-73855377 Msa0521210:intron 40.0%
! AGCTTGTAGGTTGAGTTGTT+TGG - chr3_4:73855371-73855390 Msa0521210:intron 40.0%
CTCTTAATTGTGCAGTTAGC+TGG - chr3_4:73855602-73855621 Msa0521210:intron 40.0%
GCTGGACTACTTTGTACTTA+TGG - chr3_4:73855620-73855639 Msa0521210:intron 40.0%
CTTTGTACTTATGGTTGCAG+GGG - chr3_4:73855629-73855648 Msa0521210:intron 40.0%
! TGCTATGATGGTGTGTCATT+AGG + chr3_4:73856326-73856345 None:intergenic 40.0%
ACGTACTGTATCTGCTATGA+TGG + chr3_4:73856338-73856357 None:intergenic 40.0%
ATCATAGCAGATACAGTACG+TGG - chr3_4:73856337-73856356 Msa0521210:intron 40.0%
GGAAAAACTCATCCCTTTGT+AGG - chr3_4:73856375-73856394 Msa0521210:intron 40.0%
ATGCTAAGTTGTAGTTCCAC+CGG - chr3_4:73856461-73856480 Msa0521210:CDS 40.0%
GGGTACATGCTTCAACAATT+TGG - chr3_4:73856771-73856790 Msa0521210:intron 40.0%
GTCACGCACCTGTTAAAATA+TGG - chr3_4:73857060-73857079 Msa0521210:intron 40.0%
!! TTGGCTAGTTTATCTTTCCC+AGG - chr3_4:73857100-73857119 Msa0521210:intron 40.0%
! TGTGTTCGATTCGCCTAAAA+CGG + chr3_4:73857137-73857156 None:intergenic 40.0%
GAGTTTATCACGCCTAAAGA+CGG - chr3_4:73857221-73857240 Msa0521210:intron 40.0%
GAGTTTATCACGCCTAAAGA+CGG - chr3_4:73857221-73857240 Msa0521210:intron 40.0%
GTCACGCATGTGTAAATATG+TGG - chr3_4:73857484-73857503 Msa0521210:intron 40.0%
GAGTTTATCACGCCTAAAGA+CGG - chr3_4:73857221-73857240 Msa0521210:intron 40.0%
AAGTTTATCACGCCTAAGGA+CGG - chr3_4:73857857-73857876 Msa0521210:intron 40.0%
GTCACGCATGTGTAAAAATG+TGG - chr3_4:73857908-73857927 Msa0521210:intron 40.0%
AAGTTTATCACGCCTAAGGT+CGG - chr3_4:73858069-73858088 Msa0521210:intron 40.0%
ATTAGAACTTGTCCGACCTT+AGG + chr3_4:73858084-73858103 None:intergenic 40.0%
GTCACGCATGTGTAAAAATG+TGG - chr3_4:73857908-73857927 Msa0521210:intron 40.0%
! TTTGGCTAGTTATCTTTCCC+AGG - chr3_4:73858159-73858178 Msa0521210:intron 40.0%
GTTGTCTTCGTTGGAAATTG+GGG + chr3_4:73858230-73858249 None:intergenic 40.0%
GGTTGTCTTCGTTGGAAATT+GGG + chr3_4:73858231-73858250 None:intergenic 40.0%
TGGTTGTCTTCGTTGGAAAT+TGG + chr3_4:73858232-73858251 None:intergenic 40.0%
TCATCAACCACAATGTCTCT+TGG + chr3_4:73858530-73858549 None:intergenic 40.0%
GTCAAAAACAAAGACGGCAA+AGG + chr3_4:73858633-73858652 None:intergenic 40.0%
GGAGTTCCGATTGACATTTA+AGG - chr3_4:73858668-73858687 Msa0521210:intron 40.0%
GTTCCGATTGACATTTAAGG+AGG - chr3_4:73858671-73858690 Msa0521210:intron 40.0%
CTCAAATAGTCTGTGCTTAC+TGG + chr3_4:73858946-73858965 None:intergenic 40.0%
TGTATTACCAGCATTATCGC+AGG - chr3_4:73859267-73859286 Msa0521210:intron 40.0%
GTATTACCAGCATTATCGCA+GGG - chr3_4:73859268-73859287 Msa0521210:intron 40.0%
AAATTCTACAAGGGAGAGTG+AGG - chr3_4:73859347-73859366 Msa0521210:intron 40.0%
CGAATTTGTGGTTGCAAAGA+AGG + chr3_4:73859423-73859442 None:intergenic 40.0%
AGTCATGTTAGAGTTGGGAA+AGG - chr3_4:73859637-73859656 Msa0521210:intron 40.0%
! CATTGTAGGGTGCTCAAAAT+GGG + chr3_4:73859714-73859733 None:intergenic 40.0%
! TCATTGTAGGGTGCTCAAAA+TGG + chr3_4:73859715-73859734 None:intergenic 40.0%
GATATCACATGACACTGACA+TGG + chr3_4:73859741-73859760 None:intergenic 40.0%
GTGTGGCTGTCAATTACTTA+AGG + chr3_4:73860154-73860173 None:intergenic 40.0%
! GGAGGAAAAGGAGTACAAAT+AGG + chr3_4:73860361-73860380 None:intergenic 40.0%
!! CTTAGTTTGCTAGGAGGAAA+AGG + chr3_4:73860373-73860392 None:intergenic 40.0%
CTAGCAAACTAAGTGCATCT+CGG - chr3_4:73860380-73860399 Msa0521210:intron 40.0%
CTGCCTAAAAACACCAAAAC+TGG - chr3_4:73860517-73860536 Msa0521210:intron 40.0%
!!! TGCCCAGTTTTGGTGTTTTT+AGG + chr3_4:73860523-73860542 None:intergenic 40.0%
TTAACCTCGTCTTACATGCT+TGG - chr3_4:73860802-73860821 Msa0521210:intron 40.0%
CGGAACTCAATTCACTCAAA+CGG + chr3_4:73861302-73861321 None:intergenic 40.0%
TGAGTGAATTGAGTTCCGAT+TGG - chr3_4:73861304-73861323 Msa0521210:intron 40.0%
GGTTCAATCGATGCTACAAT+CGG + chr3_4:73861331-73861350 None:intergenic 40.0%
! GATTGAACCGATTCAAAGCT+AGG - chr3_4:73861342-73861361 Msa0521210:intron 40.0%
! AACCGATTCAAAGCTAGGTT+AGG - chr3_4:73861347-73861366 Msa0521210:intron 40.0%
! AGCTAGGTTAGGTTAGGTTT+TGG - chr3_4:73861412-73861431 Msa0521210:intron 40.0%
! GCTAGGTTAGGTTAGGTTTT+GGG - chr3_4:73861413-73861432 Msa0521210:intron 40.0%
!! GTTTTGGGCAAAGTGAGAAA+AGG - chr3_4:73861508-73861527 Msa0521210:intron 40.0%
TTTGGGCAAAGTGAGAAAAG+GGG - chr3_4:73861510-73861529 Msa0521210:intron 40.0%
! ATTTGGGGAAAGTGTACAAG+CGG - chr3_4:73861540-73861559 Msa0521210:intron 40.0%
AAGAGAGGAGAAATGTGTGT+GGG - chr3_4:73861597-73861616 Msa0521210:intron 40.0%
AAATGCAACAAGTGGCAAGT+GGG + chr3_4:73861624-73861643 None:intergenic 40.0%
AAAATGCAACAAGTGGCAAG+TGG + chr3_4:73861625-73861644 None:intergenic 40.0%
CCACACAAAAATGCAACAAG+TGG + chr3_4:73861632-73861651 None:intergenic 40.0%
!! CCACTTGTTGCATTTTTGTG+TGG - chr3_4:73861629-73861648 Msa0521210:intron 40.0%
! CATTTTTGTGTGGGTGTGTA+GGG - chr3_4:73861639-73861658 Msa0521210:intron 40.0%
! ATTTTTGTGTGGGTGTGTAG+GGG - chr3_4:73861640-73861659 Msa0521210:intron 40.0%
AAAATCTCGAAACCCAACAG+AGG - chr3_4:73862158-73862177 Msa0521210:intron 40.0%
AGCACAACTCTGACGAATTA+TGG + chr3_4:73862194-73862213 None:intergenic 40.0%
! CTCATAATTTGCCTTCGAAG+AGG - chr3_4:73862506-73862525 Msa0521210:intron 40.0%
!! CCCTAGAAGTATCGTAGATA+TGG - chr3_4:73862574-73862593 Msa0521210:intron 40.0%
CATCTAACGTTGAAAGGAGA+TGG - chr3_4:73862598-73862617 Msa0521210:intron 40.0%
! ACTTAGAGTGTTCGTATCTC+CGG - chr3_4:73862724-73862743 Msa0521210:intron 40.0%
AGCGCTTTGGTAGAAAACTA+CGG - chr3_4:73862770-73862789 Msa0521210:intron 40.0%
! TAACTTGTGAGCAATTAGGG+AGG - chr3_4:73862805-73862824 Msa0521210:intron 40.0%
CTACATAAGGACTTCAAAGG+AGG + chr3_4:73862898-73862917 None:intergenic 40.0%
AATGTTGTTCGCACAGTGTT+TGG + chr3_4:73863085-73863104 None:intergenic 40.0%
TACACAAGTCAACGTGATGA+AGG - chr3_4:73863117-73863136 Msa0521210:intron 40.0%
ACACAAGTCAACGTGATGAA+GGG - chr3_4:73863118-73863137 Msa0521210:intron 40.0%
! ATCTTCATCCACAATGGACT+TGG + chr3_4:73863147-73863166 None:intergenic 40.0%
!! AAGAGCATCTTCATCCACAA+TGG + chr3_4:73863153-73863172 None:intergenic 40.0%
!!! CATTTTAAAGTAGTACCGCG+TGG - chr3_4:73863213-73863232 Msa0521210:intron 40.0%
TGGACATGTTTATGGAGTGA+TGG + chr3_4:73863281-73863300 None:intergenic 40.0%
TGAACAACGCTAAGAGAGAA+AGG + chr3_4:73863435-73863454 None:intergenic 40.0%
TTCAACACAAAGCCACTACA+AGG - chr3_4:73863451-73863470 Msa0521210:intron 40.0%
! GACAATGGAGGCATAACATT+AGG - chr3_4:73863556-73863575 Msa0521210:intron 40.0%
CCTGATGCAGAGAAATAAAC+TGG + chr3_4:73863643-73863662 None:intergenic 40.0%
! CCAGTTTATTTCTCTGCATC+AGG - chr3_4:73863640-73863659 Msa0521210:intron 40.0%
CACCATTGAGATTCCAATTC+TGG - chr3_4:73863693-73863712 Msa0521210:intron 40.0%
ACCCAGAATTGGAATCTCAA+TGG + chr3_4:73863698-73863717 None:intergenic 40.0%
!!! CACACTTTTGGTTCATTGCA+AGG + chr3_4:73863724-73863743 None:intergenic 40.0%
CTTGCAATGAACCAAAAGTG+TGG - chr3_4:73863722-73863741 Msa0521210:intron 40.0%
!! GTGTGGAGACTTTTAAAGGT+TGG - chr3_4:73863739-73863758 Msa0521210:intron 40.0%
! TAAAGGTTGGATCTGGGTTT+TGG - chr3_4:73863752-73863771 Msa0521210:intron 40.0%
GGAACTAAAGTTATGGCTGT+TGG - chr3_4:73863931-73863950 Msa0521210:exon 40.0%
! AAAGTTATGGCTGTTGGTGA+TGG - chr3_4:73863937-73863956 Msa0521210:exon 40.0%
AGAATTGGAGAGATAGCTGG+TGG + chr3_4:73853865-73853884 None:intergenic 45.0%
GAGAGAATTGGAGAGATAGC+TGG + chr3_4:73853868-73853887 None:intergenic 45.0%
ATCTCTCCAATTCTCTCCGA+CGG - chr3_4:73853871-73853890 Msa0521210:CDS 45.0%
CCTAAGAATGGGTAGAGAGA+TGG + chr3_4:73853925-73853944 None:intergenic 45.0%
CCATCTCTCTACCCATTCTT+AGG - chr3_4:73853922-73853941 Msa0521210:CDS 45.0%
ACATGGTCCATCGTGATTGT+AGG - chr3_4:73854826-73854845 Msa0521210:intron 45.0%
CCTGATACCTACAATCACGA+TGG + chr3_4:73854836-73854855 None:intergenic 45.0%
CCATCGTGATTGTAGGTATC+AGG - chr3_4:73854833-73854852 Msa0521210:intron 45.0%
! GGTTGAGTTGTTTGGTTGTG+CGG - chr3_4:73855379-73855398 Msa0521210:intron 45.0%
! GTTGAGTTGTTTGGTTGTGC+GGG - chr3_4:73855380-73855399 Msa0521210:intron 45.0%
TGCGGGAGTTGCAATGTTTA+TGG - chr3_4:73855397-73855416 Msa0521210:intron 45.0%
!!! GTTGCAGGGGCATTTGATTT+TGG - chr3_4:73855642-73855661 Msa0521210:intron 45.0%
ACGTGGTGAACTCAATCACA+AGG - chr3_4:73856354-73856373 Msa0521210:intron 45.0%
GAGTTCATCACGCCTAAAGA+AGG - chr3_4:73857009-73857028 Msa0521210:intron 45.0%
! GTGTTCGATTCGCCTAAAAC+GGG + chr3_4:73857136-73857155 None:intergenic 45.0%
CGACAAGTTTATCACGCCTA+AGG - chr3_4:73857853-73857872 Msa0521210:intron 45.0%
AGTTTATCACGCCTAAGGAC+GGG - chr3_4:73857858-73857877 Msa0521210:intron 45.0%
ATTAGAACTTGCCCGTCCTT+AGG + chr3_4:73857872-73857891 None:intergenic 45.0%
!! ACATGTTTAATGGTGGACGG+CGG + chr3_4:73858264-73858283 None:intergenic 45.0%
CCTGAATGTGGAAAAGACGT+AGG + chr3_4:73858307-73858326 None:intergenic 45.0%
! CCTACGTCTTTTCCACATTC+AGG - chr3_4:73858304-73858323 Msa0521210:intron 45.0%
! TGAGATGGAGTACCTGAATG+TGG + chr3_4:73858319-73858338 None:intergenic 45.0%
ATTCACTGCTGCAATGCTTC+TGG + chr3_4:73858866-73858885 None:intergenic 45.0%
TAAGGATTGGGACAGTGCAT+TGG + chr3_4:73858893-73858912 None:intergenic 45.0%
TCCCAATCCTTAACCCTCAA+TGG - chr3_4:73858901-73858920 Msa0521210:intron 45.0%
GCCATTGAGGGTTAAGGATT+GGG + chr3_4:73858905-73858924 None:intergenic 45.0%
AGCCATTGAGGGTTAAGGAT+TGG + chr3_4:73858906-73858925 None:intergenic 45.0%
AATGCAGCCATTGAGGGTTA+AGG + chr3_4:73858911-73858930 None:intergenic 45.0%
GCATTGAATGCAGCCATTGA+GGG + chr3_4:73858917-73858936 None:intergenic 45.0%
! AGCATTGAATGCAGCCATTG+AGG + chr3_4:73858918-73858937 None:intergenic 45.0%
TCGCAGGGTTACTGAAATGT+TGG - chr3_4:73859283-73859302 Msa0521210:intron 45.0%
TGGTGCAAGGATAGTTGCAA+AGG + chr3_4:73859375-73859394 None:intergenic 45.0%
ATCCTTGCACCACTGATAAC+AGG - chr3_4:73859383-73859402 Msa0521210:intron 45.0%
ATCCTGTTATCAGTGGTGCA+AGG + chr3_4:73859388-73859407 None:intergenic 45.0%
!! AATGGGAGTGCTTCTAACTG+AGG + chr3_4:73859697-73859716 None:intergenic 45.0%
CTGACATGGGTCTCATTGTA+GGG + chr3_4:73859727-73859746 None:intergenic 45.0%
ACTGACATGGGTCTCATTGT+AGG + chr3_4:73859728-73859747 None:intergenic 45.0%
!! GATGCACTTAGTTTGCTAGG+AGG + chr3_4:73860379-73860398 None:intergenic 45.0%
!! CGAGATGCACTTAGTTTGCT+AGG + chr3_4:73860382-73860401 None:intergenic 45.0%
CTTTAGTCGTGAATGCTGTC+CGG + chr3_4:73860416-73860435 None:intergenic 45.0%
CAGCATTCACGACTAAAGGT+AGG - chr3_4:73860418-73860437 Msa0521210:intron 45.0%
!! AGCTGTTTTGTGCCCAGTTT+TGG + chr3_4:73860533-73860552 None:intergenic 45.0%
!!! GGTGTTTTTGGGACTGTTAC+TGG + chr3_4:73860581-73860600 None:intergenic 45.0%
TCACTCAAACGGTGCTCAAA+CGG + chr3_4:73861291-73861310 None:intergenic 45.0%
GATGCTACAATCGGTCCAAT+CGG + chr3_4:73861322-73861341 None:intergenic 45.0%
TGTGAGAGCTAGGTTAGGTT+AGG - chr3_4:73861406-73861425 Msa0521210:intron 45.0%
!!! GTTAGGTTTTGGGAGTGAGA+AGG - chr3_4:73861364-73861383 Msa0521210:intron 45.0%
! GAGAAGGCATAACGATTGAG+AGG - chr3_4:73861439-73861458 Msa0521210:intron 45.0%
TTGAGAGTGAGATGGAGATC+TGG - chr3_4:73861483-73861502 Msa0521210:intron 45.0%
TGAGAGTGAGATGGAGATCT+GGG - chr3_4:73861484-73861503 Msa0521210:intron 45.0%
! TTTGGGGAAAGTGTACAAGC+GGG - chr3_4:73861541-73861560 Msa0521210:intron 45.0%
GGGTGATAAAGAAAGGGTGA+AGG - chr3_4:73861574-73861593 Msa0521210:intron 45.0%
AAGAAAGGGTGAAGGAAGAG+AGG - chr3_4:73861582-73861601 Msa0521210:intron 45.0%
GAAGAGAGGAGAAATGTGTG+TGG - chr3_4:73861596-73861615 Msa0521210:intron 45.0%
! GCATTTTTGTGTGGGTGTGT+AGG - chr3_4:73861638-73861657 Msa0521210:intron 45.0%
GATTGGTGTACACCCTTATG+TGG + chr3_4:73861672-73861691 None:intergenic 45.0%
! TGTGTCATAGTGTCGAACCT+AGG + chr3_4:73862117-73862136 None:intergenic 45.0%
!!! AAGAGGTTGCTTTTGCATGC+AGG + chr3_4:73862370-73862389 None:intergenic 45.0%
GTTAAACTGATTGTGGGGTG+TGG + chr3_4:73862416-73862435 None:intergenic 45.0%
! AAGAGGTTGCTTTGGCATGA+AGG - chr3_4:73862523-73862542 Msa0521210:intron 45.0%
GCTTTGGTAGAAAACTACGG+AGG - chr3_4:73862773-73862792 Msa0521210:intron 45.0%
! CCTGGACCATTTGCTACATA+AGG + chr3_4:73862911-73862930 None:intergenic 45.0%
CCTTATGTAGCAAATGGTCC+AGG - chr3_4:73862908-73862927 Msa0521210:intron 45.0%
GAAACACACGAGAAGCGATA+AGG - chr3_4:73862973-73862992 Msa0521210:intron 45.0%
ATCGGCAGTTAACTGCCAAT+GGG + chr3_4:73863028-73863047 None:intergenic 45.0%
AAGGGATACCAAGTCCATTG+TGG - chr3_4:73863136-73863155 Msa0521210:intron 45.0%
TGTTTGTCTACTACTGCCTC+TGG + chr3_4:73863484-73863503 None:intergenic 45.0%
GAGGCAGTAGTAGACAAACA+AGG - chr3_4:73863484-73863503 Msa0521210:intron 45.0%
AACCTTCACCTGGTTGAAGA+GGG + chr3_4:73863513-73863532 None:intergenic 45.0%
TAACCTTCACCTGGTTGAAG+AGG + chr3_4:73863514-73863533 None:intergenic 45.0%
ATCCGTAACCCTGATGCAAT+TGG - chr3_4:73863613-73863632 Msa0521210:intron 45.0%
TGCCAATTGCATCAGGGTTA+CGG + chr3_4:73863618-73863637 None:intergenic 45.0%
ATGGTGAGATCAGTGAGAGT+TGG + chr3_4:73863679-73863698 None:intergenic 45.0%
TTGCAAGGACTACCCAGAAT+TGG + chr3_4:73863709-73863728 None:intergenic 45.0%
!!! TTTTGGTTTGTGAGCACTGG+TGG - chr3_4:73863769-73863788 Msa0521210:intron 45.0%
TTCAAGATTGAGAGGCTTGC+AGG - chr3_4:73863817-73863836 Msa0521210:intron 45.0%
AAGTTCTGTCCTTCTGTTCC+TGG - chr3_4:73863868-73863887 Msa0521210:CDS 45.0%
CAAAGAACACCAGGAACAGA+AGG + chr3_4:73863880-73863899 None:intergenic 45.0%
!! ATTCAAAAATTATTTAATAT+GGG + chr3_4:73862313-73862332 None:intergenic 5.0%
!! TATTCAAAAATTATTTAATA+TGG + chr3_4:73862314-73862333 None:intergenic 5.0%
CTCTACCCATTCTTAGGCGA+CGG - chr3_4:73853928-73853947 Msa0521210:CDS 50.0%
GAGATCCGTCGCCTAAGAAT+GGG + chr3_4:73853936-73853955 None:intergenic 50.0%
AGAGATCCGTCGCCTAAGAA+TGG + chr3_4:73853937-73853956 None:intergenic 50.0%
TGACTGCGAGAAAGGATAGC+TGG + chr3_4:73853992-73854011 None:intergenic 50.0%
GTGAGAGTTGACTGCGAGAA+AGG + chr3_4:73854000-73854019 None:intergenic 50.0%
CGGCAAGTTTATCACGCCTA+AGG - chr3_4:73858065-73858084 Msa0521210:intron 50.0%
CAGTAACCCTGCGATAATGC+TGG + chr3_4:73859277-73859296 None:intergenic 50.0%
! TCGTGAATGCTGTCCGGTTT+TGG + chr3_4:73860410-73860429 None:intergenic 50.0%
CGGACAGCATTCACGACTAA+AGG - chr3_4:73860414-73860433 Msa0521210:intron 50.0%
!!! AGGGCAGTAGGTGTTTTTGG+TGG + chr3_4:73860449-73860468 None:intergenic 50.0%
ACCAAAAACACCTACTGCCC+TGG - chr3_4:73860448-73860467 Msa0521210:intron 50.0%
TGTCTGTAATAGCCCCTGCT+GGG + chr3_4:73860489-73860508 None:intergenic 50.0%
TTGTCTGTAATAGCCCCTGC+TGG + chr3_4:73860490-73860509 None:intergenic 50.0%
CAAGCCAAGCATGTAAGACG+AGG + chr3_4:73860809-73860828 None:intergenic 50.0%
TTAGAGCGAGTGTGAGAGCT+AGG - chr3_4:73861396-73861415 Msa0521210:intron 50.0%
GAGAGTGAGATGGAGATCTG+GGG - chr3_4:73861485-73861504 Msa0521210:intron 50.0%
AGAGTGAGATGGAGATCTGG+GGG - chr3_4:73861486-73861505 Msa0521210:intron 50.0%
! AGATGGAGATCTGGGGGTTT+TGG - chr3_4:73861492-73861511 Msa0521210:intron 50.0%
! GATGGAGATCTGGGGGTTTT+GGG - chr3_4:73861493-73861512 Msa0521210:intron 50.0%
! TTGGGGAAAGTGTACAAGCG+GGG - chr3_4:73861542-73861561 Msa0521210:intron 50.0%
TACAAGCGGGGGGAATGAAT+GGG - chr3_4:73861554-73861573 Msa0521210:intron 50.0%
TAGGGGTGGATGCCACATAA+GGG - chr3_4:73861657-73861676 Msa0521210:intron 50.0%
! GGTATGGTAGTGCCTCTGTT+GGG + chr3_4:73862173-73862192 None:intergenic 50.0%
! TGGTATGGTAGTGCCTCTGT+TGG + chr3_4:73862174-73862193 None:intergenic 50.0%
TGCCTTCGAAGAGGTTGCTT+TGG - chr3_4:73862515-73862534 Msa0521210:intron 50.0%
TGCCAAAGCAACCTCTTCGA+AGG + chr3_4:73862520-73862539 None:intergenic 50.0%
AGATGACCACAAATGAGCGG+TGG + chr3_4:73862682-73862701 None:intergenic 50.0%
CATCGGCAGTTAACTGCCAA+TGG + chr3_4:73863029-73863048 None:intergenic 50.0%
TTGGCAGTTAACTGCCGATG+AGG - chr3_4:73863029-73863048 Msa0521210:intron 50.0%
TTGTTCGCACAGTGTTTGGC+CGG + chr3_4:73863081-73863100 None:intergenic 50.0%
! TCTGGTTCAGCTCCTTGTAG+TGG + chr3_4:73863466-73863485 None:intergenic 50.0%
ACTACAAGGAGCTGAACCAG+AGG - chr3_4:73863465-73863484 Msa0521210:intron 50.0%
CAAGGTAACCCTCTTCAACC+AGG - chr3_4:73863502-73863521 Msa0521210:intron 50.0%
AACCCTCTTCAACCAGGTGA+AGG - chr3_4:73863508-73863527 Msa0521210:intron 50.0%
TTTCCACTTTGGGCCGACAA+TGG - chr3_4:73863541-73863560 Msa0521210:intron 50.0%
! GGGTTACGGATTACGTCAAG+AGG + chr3_4:73863604-73863623 None:intergenic 50.0%
CTGGTGTGCCAATTGCATCA+GGG + chr3_4:73863624-73863643 None:intergenic 50.0%
ACTGGTGTGCCAATTGCATC+AGG + chr3_4:73863625-73863644 None:intergenic 50.0%
!!! GGGTTTTGGTTTGTGAGCAC+TGG - chr3_4:73863766-73863785 Msa0521210:intron 50.0%
! ACAGGAGCACAAAGAACACC+AGG + chr3_4:73863889-73863908 None:intergenic 50.0%
GGTGTTCTTTGTGCTCCTGT+TGG - chr3_4:73863889-73863908 Msa0521210:CDS 50.0%
TAGCGAAAGGGTAGCGTGAG+TGG + chr3_4:73853835-73853854 None:intergenic 55.0%
ATGGAGCCGTCGGAGAGAAT+TGG + chr3_4:73853880-73853899 None:intergenic 55.0%
CATCGGAGAGAGGGTTGAGA+TGG + chr3_4:73853899-73853918 None:intergenic 55.0%
CATCTCAACCCTCTCTCCGA+TGG - chr3_4:73853897-73853916 Msa0521210:CDS 55.0%
AGATGGAGCCATCGGAGAGA+GGG + chr3_4:73853908-73853927 None:intergenic 55.0%
GGGTAGAGAGATGGAGCCAT+CGG + chr3_4:73853916-73853935 None:intergenic 55.0%
CTGCGAGAAAGGATAGCTGG+TGG + chr3_4:73853989-73854008 None:intergenic 55.0%
GTTGCGGTGGTTGTCTTCGT+TGG + chr3_4:73858239-73858258 None:intergenic 55.0%
GGATTGGGACAGTGCATTGG+TGG + chr3_4:73858890-73858909 None:intergenic 55.0%
GCATCTCGGCGATCCAAAAC+CGG - chr3_4:73860394-73860413 Msa0521210:intron 55.0%
! GCCAGGGCAGTAGGTGTTTT+TGG + chr3_4:73860452-73860471 None:intergenic 55.0%
!! TTTTAGCTGGCCAGGGCAGT+AGG + chr3_4:73860461-73860480 None:intergenic 55.0%
AGCTAAAACAGCGCCCAGCA+GGG - chr3_4:73860473-73860492 Msa0521210:intron 55.0%
GGTGCTCACCCAATCTGTTC+TGG + chr3_4:73861194-73861213 None:intergenic 55.0%
GCGAGTGTGAGAGCTAGGTT+AGG - chr3_4:73861401-73861420 Msa0521210:intron 55.0%
! TGGGGAAAGTGTACAAGCGG+GGG - chr3_4:73861543-73861562 Msa0521210:intron 55.0%
GTACAAGCGGGGGGAATGAA+TGG - chr3_4:73861553-73861572 Msa0521210:intron 55.0%
TTTGTGTGGGTGTGTAGGGG+TGG - chr3_4:73861643-73861662 Msa0521210:intron 55.0%
GTAGGGGTGGATGCCACATA+AGG - chr3_4:73861656-73861675 Msa0521210:intron 55.0%
GTGCAACCACCGCTCATTTG+TGG - chr3_4:73862673-73862692 Msa0521210:intron 55.0%
TATTTGCCATGAGCGCCACG+CGG + chr3_4:73863231-73863250 None:intergenic 55.0%
CGCTACCCTTTCGCTACCGA+CGG - chr3_4:73853839-73853858 Msa0521210:CDS 60.0%
GAGAGATAGCTGGTGGCCGT+CGG + chr3_4:73853858-73853877 None:intergenic 60.0%
GAGGGTTGAGATGGAGCCGT+CGG + chr3_4:73853890-73853909 None:intergenic 60.0%
GAGATGGAGCCATCGGAGAG+AGG + chr3_4:73853909-73853928 None:intergenic 60.0%
CCATCTCTCCCTCAACCCTC+CGG - chr3_4:73853957-73853976 Msa0521210:CDS 60.0%
!!! GGCGCTGTTTTAGCTGGCCA+GGG + chr3_4:73860468-73860487 None:intergenic 60.0%
!!! CTGCTGGGCGCTGTTTTAGC+TGG + chr3_4:73860474-73860493 None:intergenic 60.0%
CAGCTAAAACAGCGCCCAGC+AGG - chr3_4:73860472-73860491 Msa0521210:intron 60.0%
GCTAAAACAGCGCCCAGCAG+GGG - chr3_4:73860474-73860493 Msa0521210:intron 60.0%
! GGGGAAAGTGTACAAGCGGG+GGG - chr3_4:73861544-73861563 Msa0521210:intron 60.0%
CCTCCATTGTCGGCCCAAAG+TGG + chr3_4:73863547-73863566 None:intergenic 60.0%
CCACTTTGGGCCGACAATGG+AGG - chr3_4:73863544-73863563 Msa0521210:intron 60.0%
!! TGAGCACTGGTGGTGCAGCT+GGG - chr3_4:73863779-73863798 Msa0521210:intron 60.0%
GGTGGCCGTCGGTAGCGAAA+GGG + chr3_4:73853847-73853866 None:intergenic 65.0%
TGGTGGCCGTCGGTAGCGAA+AGG + chr3_4:73853848-73853867 None:intergenic 65.0%
CCGGAGGGTTGAGGGAGAGA+TGG + chr3_4:73853960-73853979 None:intergenic 65.0%
!! ATGGTGGACGGCGGTCGTTG+CGG + chr3_4:73858255-73858274 None:intergenic 65.0%
!!! GGGCGCTGTTTTAGCTGGCC+AGG + chr3_4:73860469-73860488 None:intergenic 65.0%
GTAGTACCGCGTGGCGCTCA+TGG - chr3_4:73863222-73863241 Msa0521210:intron 65.0%
!! GTGAGCACTGGTGGTGCAGC+TGG - chr3_4:73863778-73863797 Msa0521210:intron 65.0%
!! GAGCACTGGTGGTGCAGCTG+GGG - chr3_4:73863780-73863799 Msa0521210:intron 65.0%
CTCCCTCAACCCTCCGGCGA+CGG - chr3_4:73853963-73853982 Msa0521210:CDS 70.0%
GGATAGCTGGTGGCCGTCGC+CGG + chr3_4:73853979-73853998 None:intergenic 70.0%
GGCCGTCGCCGGAGGGTTGA+GGG + chr3_4:73853968-73853987 None:intergenic 75.0%
TGGCCGTCGCCGGAGGGTTG+AGG + chr3_4:73853969-73853988 None:intergenic 75.0%
AGCTGGTGGCCGTCGCCGGA+GGG + chr3_4:73853975-73853994 None:intergenic 75.0%
TAGCTGGTGGCCGTCGCCGG+AGG + chr3_4:73853976-73853995 None:intergenic 75.0%
GTGGACGGCGGTCGTTGCGG+TGG + chr3_4:73858252-73858271 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 73853818 73864041 73853818 ID=Msa0521210;Name=Msa0521210
chr3_4 mRNA 73853818 73864041 73853818 ID=Msa0521210-mRNA-1;Parent=Msa0521210;Name=Msa0521210-mRNA-1;_AED=0.15;_eAED=0.15;_QI=98|0|0.33|0.66|1|1|3|0|261
chr3_4 exon 73853818 73854413 73853818 ID=Msa0521210-mRNA-1:exon:20819;Parent=Msa0521210-mRNA-1
chr3_4 exon 73856437 73856521 73856437 ID=Msa0521210-mRNA-1:exon:20818;Parent=Msa0521210-mRNA-1
chr3_4 exon 73863839 73864041 73863839 ID=Msa0521210-mRNA-1:exon:20817;Parent=Msa0521210-mRNA-1
chr3_4 five_prime_UTR 73863944 73864041 73863944 ID=Msa0521210-mRNA-1:five_prime_utr;Parent=Msa0521210-mRNA-1
chr3_4 CDS 73863839 73863943 73863839 ID=Msa0521210-mRNA-1:cds;Parent=Msa0521210-mRNA-1
chr3_4 CDS 73856437 73856521 73856437 ID=Msa0521210-mRNA-1:cds;Parent=Msa0521210-mRNA-1
chr3_4 CDS 73853818 73854413 73853818 ID=Msa0521210-mRNA-1:cds;Parent=Msa0521210-mRNA-1
Gene Sequence

>Msa0521210

ATGGCTCCATCTCTCTACCCATTCTTAGGCGACGGATCTCTCCATCTCTCCCTCAACCCTCCGGCGACGGCCACCAGCTATCCTTTCTCGCAGTCAACTCTCACACATCGATTGAACCGATTCAAAGCTAGGTTAGGTTTTGGGAGTGAGAAGATTCTGAATCTTAGAGCGAGTGTGAGAGCTAGGTTAGCGTTGTTCAACACAAAGCCACTACAAGGAGCTGAACCAGAGGCAGTAGTAGACAAACAAGGTAACCCTCTTCAACCAGGTGAAGGTTATTATGTATTTCCACTTTGGGCCGACAATGGAGGCATAACATTAGGACAAACAAGAAACAAAACATGTCCTCTTGACGTAATCCGTAACCCTGATGCAATTGGCACACCAGTTTATTTCTCTGCATCAGGTCTTGATTACATTCCAACTCTCACTGATCTCACCATTGAGATTCCAATTCTGGGTAGTCCTTGCAATGAACCAAAAGTGTGGAGACTTTTAAAGGTTGGATCTGGGTTTTGGTTTGTGAGCACTGGTGGTGCAGCTGGGGATCTTGTTAGCAAGTTCAAGATTGAGAGGCTTGCAGGAGAACATGCTTATGAGATATATAGCTTTAAGTTCTGTCCTTCTGTTCCTGGTGTTCTTTGTGCTCCTGTTGGAACTTTTGTAGATACTGATGGAACTAAAGTTATGGCTGTTGGTGATGGTATTGAAGAACCTTACTATGTTAGATTTCAGAAGGCTTCCACTTTTGCTCAGAGCAATAATCAATATTTGAGCAGTGTGTAA

Protein sequence

>Msa0521210

MAPSLYPFLGDGSLHLSLNPPATATSYPFSQSTLTHRLNRFKARLGFGSEKILNLRASVRARLALFNTKPLQGAEPEAVVDKQGNPLQPGEGYYVFPLWADNGGITLGQTRNKTCPLDVIRNPDAIGTPVYFSASGLDYIPTLTDLTIEIPILGSPCNEPKVWRLLKVGSGFWFVSTGGAAGDLVSKFKIERLAGEHAYEIYSFKFCPSVPGVLCAPVGTFVDTDGTKVMAVGDGIEEPYYVRFQKASTFAQSNNQYLSSV*