Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893860 | XP_003619578.3 | 62.100 | 219 | 55 | 4 | 1 | 195 | 1 | 215 | 1.62e-72 | 238 |
| Msa0893860 | XP_003619578.3 | 95.000 | 200 | 10 | 0 | 272 | 471 | 17 | 216 | 1.16e-118 | 356 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893860 | sp|O82711|PIP22_PEA | 80.597 | 201 | 38 | 1 | 272 | 471 | 17 | 217 | 1.39e-114 | 338 |
| Msa0893860 | sp|O82711|PIP22_PEA | 63.014 | 219 | 54 | 3 | 1 | 195 | 1 | 216 | 1.30e-83 | 259 |
| Msa0893860 | sp|O82711|PIP22_PEA | 61.538 | 65 | 25 | 0 | 213 | 277 | 32 | 96 | 1.45e-16 | 82.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893860 | G7KMU7 | 62.100 | 219 | 55 | 4 | 1 | 195 | 1 | 215 | 7.74e-73 | 238 |
| Msa0893860 | G7KMU7 | 95.000 | 200 | 10 | 0 | 272 | 471 | 17 | 216 | 5.55e-119 | 356 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0829130 | Msa0893860 | 0.881793 | 1.786010e-70 | -8.615850e-47 |
| Msa0432420 | Msa0893860 | 0.864946 | 8.432317e-65 | -8.615850e-47 |
| Msa0476840 | Msa0893860 | 0.879263 | 1.437380e-69 | -8.615850e-47 |
| Msa0521210 | Msa0893860 | 0.865076 | 7.676486e-65 | -8.615850e-47 |
| Msa0893860 | Msa0920520 | 0.887189 | 1.775604e-72 | -8.615850e-47 |
| Msa0893860 | Msa1367040 | 0.843762 | 1.147859e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893860 | MtrunA17_Chr6g0476831 | 94.975 | 199 | 10 | 0 | 272 | 470 | 17 | 215 | 4.77e-122 | 355 |
| Msa0893860 | MtrunA17_Chr6g0476831 | 61.818 | 220 | 56 | 4 | 1 | 196 | 1 | 216 | 3.93e-76 | 238 |
| Msa0893860 | MtrunA17_Chr6g0476831 | 63.077 | 65 | 24 | 0 | 213 | 277 | 31 | 95 | 5.53e-12 | 65.5 |
| Msa0893860 | MtrunA17_Chr6g0476871 | 82.192 | 219 | 15 | 2 | 1 | 195 | 1 | 219 | 1.76e-100 | 300 |
| Msa0893860 | MtrunA17_Chr6g0476871 | 70.500 | 200 | 55 | 2 | 275 | 470 | 20 | 219 | 3.01e-84 | 258 |
| Msa0893860 | MtrunA17_Chr6g0476871 | 70.769 | 65 | 19 | 0 | 213 | 277 | 32 | 96 | 1.70e-14 | 72.8 |
| Msa0893860 | MtrunA17_Chr6g0452491 | 53.158 | 190 | 83 | 3 | 272 | 459 | 17 | 202 | 2.46e-59 | 194 |
| Msa0893860 | MtrunA17_Chr6g0452491 | 47.317 | 205 | 84 | 5 | 1 | 184 | 1 | 202 | 1.27e-46 | 160 |
| Msa0893860 | MtrunA17_Chr6g0452521 | 52.632 | 190 | 84 | 3 | 272 | 459 | 50 | 235 | 5.40e-58 | 191 |
| Msa0893860 | MtrunA17_Chr6g0452521 | 46.117 | 206 | 86 | 6 | 1 | 184 | 33 | 235 | 3.14e-43 | 152 |
| Msa0893860 | MtrunA17_Chr6g0477741 | 50.769 | 195 | 90 | 3 | 272 | 464 | 17 | 207 | 3.25e-53 | 178 |
| Msa0893860 | MtrunA17_Chr6g0477741 | 49.289 | 211 | 83 | 4 | 1 | 190 | 1 | 208 | 3.24e-48 | 165 |
| Msa0893860 | MtrunA17_Chr6g0477751 | 48.223 | 197 | 94 | 4 | 272 | 464 | 17 | 209 | 3.31e-50 | 170 |
| Msa0893860 | MtrunA17_Chr6g0477751 | 45.540 | 213 | 90 | 4 | 1 | 190 | 1 | 210 | 7.64e-41 | 145 |
| Msa0893860 | MtrunA17_Chr1g0163381 | 44.700 | 217 | 111 | 6 | 262 | 470 | 8 | 223 | 4.85e-49 | 167 |
| Msa0893860 | MtrunA17_Chr1g0163381 | 44.053 | 227 | 91 | 8 | 1 | 195 | 1 | 223 | 3.22e-42 | 149 |
| Msa0893860 | MtrunA17_Chr6g0476791 | 49.746 | 197 | 89 | 7 | 272 | 461 | 20 | 213 | 2.38e-47 | 162 |
| Msa0893860 | MtrunA17_Chr6g0476791 | 47.465 | 217 | 79 | 10 | 1 | 186 | 1 | 213 | 1.83e-42 | 149 |
| Msa0893860 | MtrunA17_Chr6g0476921 | 50.549 | 182 | 81 | 6 | 284 | 460 | 26 | 203 | 4.06e-44 | 154 |
| Msa0893860 | MtrunA17_Chr6g0476921 | 41.361 | 191 | 76 | 8 | 22 | 185 | 22 | 203 | 7.91e-27 | 107 |
| Msa0893860 | MtrunA17_Chr3g0104591 | 50.265 | 189 | 81 | 6 | 278 | 459 | 21 | 203 | 8.53e-37 | 134 |
| Msa0893860 | MtrunA17_Chr3g0104591 | 41.304 | 184 | 72 | 6 | 30 | 184 | 27 | 203 | 1.40e-22 | 95.5 |
| Msa0893860 | MtrunA17_Chr6g0476961 | 48.913 | 184 | 82 | 6 | 284 | 463 | 23 | 198 | 1.08e-35 | 131 |
| Msa0893860 | MtrunA17_Chr6g0476961 | 40.909 | 220 | 84 | 12 | 1 | 192 | 1 | 202 | 4.21e-25 | 102 |
| Msa0893860 | MtrunA17_Chr6g0476951 | 47.826 | 184 | 84 | 6 | 284 | 463 | 24 | 199 | 1.16e-34 | 128 |
| Msa0893860 | MtrunA17_Chr6g0476951 | 40.455 | 220 | 86 | 11 | 1 | 192 | 1 | 203 | 2.97e-27 | 108 |
| Msa0893860 | MtrunA17_Chr6g0477281 | 45.763 | 177 | 71 | 3 | 284 | 459 | 28 | 180 | 1.59e-31 | 119 |
| Msa0893860 | MtrunA17_Chr6g0477281 | 39.286 | 196 | 80 | 7 | 7 | 184 | 6 | 180 | 2.47e-25 | 102 |
| Msa0893860 | MtrunA17_Chr6g0457121 | 58.000 | 100 | 27 | 2 | 1 | 87 | 26 | 123 | 4.88e-25 | 99.8 |
| Msa0893860 | MtrunA17_Chr6g0457121 | 63.095 | 84 | 28 | 2 | 272 | 355 | 42 | 122 | 2.27e-23 | 95.1 |
| Msa0893860 | MtrunA17_Chr6g0457121 | 54.688 | 64 | 27 | 1 | 213 | 276 | 55 | 116 | 4.86e-13 | 65.9 |
| Msa0893860 | MtrunA17_Chr6g0481941 | 33.871 | 186 | 109 | 7 | 284 | 459 | 24 | 205 | 1.01e-18 | 84.3 |
| Msa0893860 | MtrunA17_Chr6g0481941 | 30.952 | 210 | 105 | 8 | 5 | 184 | 6 | 205 | 6.90e-14 | 70.5 |
| Msa0893860 | MtrunA17_Chr6g0481911 | 32.787 | 183 | 113 | 6 | 284 | 459 | 24 | 203 | 1.73e-18 | 84.0 |
| Msa0893860 | MtrunA17_Chr6g0481911 | 30.244 | 205 | 108 | 9 | 10 | 184 | 4 | 203 | 2.64e-12 | 65.9 |
| Msa0893860 | MtrunA17_Chr6g0467621 | 38.554 | 166 | 88 | 8 | 286 | 444 | 32 | 190 | 4.89e-18 | 82.8 |
| Msa0893860 | MtrunA17_Chr6g0467621 | 40.800 | 125 | 56 | 3 | 1 | 108 | 1 | 124 | 2.39e-13 | 69.3 |
| Msa0893860 | MtrunA17_Chr6g0467611 | 38.857 | 175 | 93 | 8 | 277 | 444 | 23 | 190 | 8.56e-18 | 82.4 |
| Msa0893860 | MtrunA17_Chr6g0467611 | 42.400 | 125 | 54 | 3 | 1 | 108 | 1 | 124 | 1.15e-13 | 70.5 |
| Msa0893860 | MtrunA17_Chr6g0467761 | 38.286 | 175 | 94 | 8 | 277 | 444 | 23 | 190 | 2.58e-17 | 80.9 |
| Msa0893860 | MtrunA17_Chr6g0467761 | 41.600 | 125 | 55 | 3 | 1 | 108 | 1 | 124 | 2.95e-13 | 69.3 |
| Msa0893860 | MtrunA17_Chr6g0467771 | 36.464 | 181 | 101 | 8 | 286 | 459 | 31 | 204 | 2.68e-16 | 78.2 |
| Msa0893860 | MtrunA17_Chr6g0467781 | 34.118 | 170 | 97 | 8 | 309 | 471 | 13 | 174 | 1.23e-13 | 68.9 |
| Msa0893860 | MtrunA17_Chr6g0476821 | 43.548 | 124 | 61 | 7 | 353 | 471 | 27 | 146 | 5.30e-13 | 66.6 |
| Msa0893860 | MtrunA17_Chr6g0482011 | 29.167 | 192 | 118 | 8 | 277 | 457 | 18 | 202 | 4.32e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893860 | AT1G17860.1 | 34.091 | 176 | 100 | 7 | 278 | 448 | 21 | 185 | 1.54e-15 | 75.5 |
| Msa0893860 | AT1G73260.1 | 32.292 | 192 | 118 | 8 | 279 | 463 | 23 | 209 | 2.31e-15 | 75.5 |
| Msa0893860 | AT1G73325.1 | 28.218 | 202 | 131 | 5 | 263 | 459 | 11 | 203 | 4.15e-11 | 63.2 |
Find 97 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTTGTTGATAATGTTAT+TGG | 0.155787 | 6_1:-78720381 | Msa0893860:CDS |
| CTCCTACTTGTTTGGATATT+GGG | 0.171447 | 6_1:-78724123 | Msa0893860:CDS |
| CAGAAACATGCTTCTGGATT+TGG | 0.212516 | 6_1:-78720285 | Msa0893860:CDS |
| TCTCCTACTTGTTTGGATAT+TGG | 0.268285 | 6_1:-78724124 | Msa0893860:CDS |
| GAGAAACATGAATCTGGATT+TGG | 0.300831 | 6_1:-78724175 | Msa0893860:intron |
| GAACAAGTATTGGACATAAA+TGG | 0.312320 | 6_1:-78724550 | Msa0893860:CDS |
| TACTATGTATTAGACATAAA+TGG | 0.315513 | 6_1:-78722337 | Msa0893860:CDS |
| GAAAGATTCTCCTACTTGTT+TGG | 0.325215 | 6_1:-78724131 | Msa0893860:intron |
| ACAATTTGTGGGCCCCTTGA+TGG | 0.328314 | 6_1:-78722274 | Msa0893860:CDS |
| TCTCCTACTTGTTTGGATAT+TGG | 0.329493 | 6_1:-78720234 | Msa0893860:CDS |
| AATATTCAGAAACATGCTTC+TGG | 0.330875 | 6_1:-78720291 | Msa0893860:CDS |
| CCTGGTATGTTGAATTTCAT+TGG | 0.339114 | 6_1:+78722169 | None:intergenic |
| GAGCAAGTATTGGACATAAA+TGG | 0.344000 | 6_1:-78720660 | Msa0893860:CDS |
| GAGCAAGTATTAGACATAAA+TGG | 0.344031 | 6_1:-78722385 | Msa0893860:CDS |
| TGACTTCTCTACGATCTTGT+AGG | 0.351929 | 6_1:+78720526 | None:intergenic |
| GATGCTGCTTCTTATGAAAC+TGG | 0.353555 | 6_1:-78724019 | Msa0893860:CDS |
| CCAAGGGGTCCTCGAATTGC+AGG | 0.355865 | 6_1:+78724490 | None:intergenic |
| TACGGGGTCTCCTACTTGTT+TGG | 0.356273 | 6_1:-78720241 | Msa0893860:CDS |
| TTTGATGATTCAGCGCAATT+AGG | 0.356654 | 6_1:+78724301 | None:intergenic |
| AATATTGAGAAACATGAATC+TGG | 0.358787 | 6_1:-78724181 | Msa0893860:CDS |
| CGATCTTGTAGGACGGTAAC+TGG | 0.361323 | 6_1:+78720537 | None:intergenic |
| ATTGCGCTGAATCATCAAAA+TGG | 0.370243 | 6_1:-78724297 | Msa0893860:CDS |
| TCTGGATTTGGTTATCAGCT+AGG | 0.370703 | 6_1:-78720273 | Msa0893860:CDS |
| CAATCTTACTCCTCCTCCTC+CGG | 0.372075 | 6_1:+78720584 | None:intergenic |
| GTTATTGGAAAAGCTTGTAT+TGG | 0.386990 | 6_1:-78720366 | Msa0893860:CDS |
| CCACTCAATGTTTGCACACC+AGG | 0.391509 | 6_1:+78720321 | None:intergenic |
| AATCTTACTCCTCCTCCTCC+GGG | 0.395046 | 6_1:+78720585 | None:intergenic |
| TGAGAAAGCTAGTGAAAGAT+TGG | 0.414943 | 6_1:+78724585 | None:intergenic |
| TTTGTGAACTCGATCTCAAT+TGG | 0.421811 | 6_1:+78724328 | None:intergenic |
| ATTATACCAGGACTTATTCC+TGG | 0.422739 | 6_1:+78720474 | None:intergenic |
| CGGAGGAGGAGGAGTAAGAT+TGG | 0.424069 | 6_1:-78720583 | Msa0893860:CDS |
| ATTATACCAGGACTTATTCC+TGG | 0.426390 | 6_1:+78724364 | None:intergenic |
| GGAAAAGCTTGTATTGGTAT+TGG | 0.433537 | 6_1:-78720360 | Msa0893860:CDS |
| GTTGTGCTGCATCAACAAAA+TGG | 0.440488 | 6_1:-78720407 | Msa0893860:CDS |
| GAATGATAAAACTTGCTTCA+TGG | 0.442987 | 6_1:+78724639 | None:intergenic |
| TTGCCAGCACTTCGTGGCCC+CGG | 0.446781 | 6_1:-78720603 | Msa0893860:CDS |
| CTGGATTTGGTTATCAGCTA+GGG | 0.449328 | 6_1:-78720272 | Msa0893860:CDS |
| TGATGTTGTTGAACAAGTAT+TGG | 0.456591 | 6_1:-78724560 | Msa0893860:CDS |
| CTACTTGTTTGGATATTGGA+AGG | 0.460131 | 6_1:-78720230 | Msa0893860:CDS |
| AAATGATGTTGAGCAAGTAT+TGG | 0.462535 | 6_1:-78720670 | Msa0893860:CDS |
| CTTCGTGGCCCCGGAGGAGG+AGG | 0.467766 | 6_1:-78720594 | Msa0893860:CDS |
| TCAAGGGGCCCACAAATTGT+AGG | 0.472032 | 6_1:+78722277 | None:intergenic |
| CCTGCAATTCGAGGACCCCT+TGG | 0.473846 | 6_1:-78724490 | Msa0893860:CDS |
| AACTGGACACTTTAAATCAC+CGG | 0.473885 | 6_1:+78720554 | None:intergenic |
| TACTTGTTTGGATATTGGGA+GGG | 0.474470 | 6_1:-78724119 | Msa0893860:CDS |
| GGTGGCCCTGAAAATTATCC+TGG | 0.477043 | 6_1:-78724229 | Msa0893860:CDS |
| AAAGCTTGTGTTGGTATTGG+TGG | 0.501875 | 6_1:-78724247 | Msa0893860:CDS |
| GCAATTCGAGGACCCCTTGG+TGG | 0.502881 | 6_1:-78724487 | Msa0893860:CDS |
| CCAGTGAAATTCAGTATACC+AGG | 0.505220 | 6_1:-78724382 | Msa0893860:CDS |
| CATGAAGAGGTCGAGGATGA+AGG | 0.506158 | 6_1:-78724094 | Msa0893860:CDS |
| CTACTTGTTTGGATATTGGG+AGG | 0.508339 | 6_1:-78724120 | Msa0893860:CDS |
| CCTGGTATACTGAATTTCAC+TGG | 0.516748 | 6_1:+78724382 | None:intergenic |
| AAAATGTAGTATTGGCCACT+AGG | 0.517427 | 6_1:+78720624 | None:intergenic |
| GGAGGAGGAGGAGTAAGATT+GGG | 0.521492 | 6_1:-78720582 | Msa0893860:CDS |
| CTAGTCTTAATCCTCCATCA+AGG | 0.525936 | 6_1:+78722260 | None:intergenic |
| AGGTTTGATAATGATGAAGC+TGG | 0.526396 | 6_1:-78720210 | Msa0893860:CDS |
| AAATAAAGAGGAGGAAGGAA+AGG | 0.527674 | 6_1:+78724614 | None:intergenic |
| ATTCGAGGACCCCTTGGTGG+AGG | 0.529072 | 6_1:-78724484 | Msa0893860:CDS |
| CCAGTGAAGTTCATCATACC+AGG | 0.530637 | 6_1:-78720492 | Msa0893860:CDS |
| ATTATACCTGGGCTTATACC+TGG | 0.534817 | 6_1:+78722151 | None:intergenic |
| TTTACATTTGACTCATCAAG+TGG | 0.535143 | 6_1:-78724062 | Msa0893860:CDS |
| TTTGTTGATGCAGCACAACT+AGG | 0.536918 | 6_1:+78720411 | None:intergenic |
| GTGCTGGCAAAATGTAGTAT+TGG | 0.538469 | 6_1:+78720616 | None:intergenic |
| AATAAAGAGGAGGAAGGAAA+GGG | 0.544322 | 6_1:+78724615 | None:intergenic |
| CCTGGTATGATGAACTTCAC+TGG | 0.552955 | 6_1:+78720492 | None:intergenic |
| GATTACAATGAAGTTATCAA+TGG | 0.556101 | 6_1:-78724409 | Msa0893860:intron |
| TAGTCTTAATCCTCCATCAA+GGG | 0.559637 | 6_1:+78722261 | None:intergenic |
| GATTGGTAGTGAAAATAAAG+AGG | 0.560938 | 6_1:+78724602 | None:intergenic |
| ATCATACCAGGAATAAGTCC+TGG | 0.562827 | 6_1:-78720480 | Msa0893860:CDS |
| TTCGTGTACTCGATCTCAAG+TGG | 0.564602 | 6_1:+78720438 | None:intergenic |
| CCAATGAAATTCAACATACC+AGG | 0.567624 | 6_1:-78722169 | Msa0893860:CDS |
| AGTGAAAATAAAGAGGAGGA+AGG | 0.568419 | 6_1:+78724609 | None:intergenic |
| AAAGCTTGTATTGGTATTGG+TGG | 0.570948 | 6_1:-78720357 | Msa0893860:CDS |
| CTTGATGGAGGATTAAGACT+AGG | 0.571293 | 6_1:-78722259 | Msa0893860:CDS |
| AACATACCAGGTATAAGCCC+AGG | 0.575025 | 6_1:-78722157 | Msa0893860:intron |
| TAGTCTTAATCCTCCACCAA+GGG | 0.575545 | 6_1:+78724474 | None:intergenic |
| TTTGAATTTGACTGAACATG+AGG | 0.576045 | 6_1:-78720181 | Msa0893860:CDS |
| CTTGGTGGAGGATTAAGACT+AGG | 0.578734 | 6_1:-78724472 | Msa0893860:CDS |
| CTTCCAATATCCAAACAAGT+AGG | 0.582048 | 6_1:+78720231 | None:intergenic |
| AGTATACCAGGAATAAGTCC+TGG | 0.585812 | 6_1:-78724370 | Msa0893860:CDS |
| ATTTGTGGGCCCCTTGATGG+AGG | 0.587006 | 6_1:-78722271 | Msa0893860:CDS |
| GAGGGCTCATGAAGAGGTCG+AGG | 0.594571 | 6_1:-78724101 | Msa0893860:CDS |
| CACTCAATGTTTGCACACCA+GGG | 0.607129 | 6_1:+78720322 | None:intergenic |
| TGGTAGTGAAAATAAAGAGG+AGG | 0.608022 | 6_1:+78724605 | None:intergenic |
| GAAGAGGTCGAGGATGAAGG+TGG | 0.622259 | 6_1:-78724091 | Msa0893860:CDS |
| TATTGGGAGGGCTCATGAAG+AGG | 0.622804 | 6_1:-78724107 | Msa0893860:CDS |
| CCAGCACTTCGTGGCCCCGG+AGG | 0.634185 | 6_1:-78720600 | Msa0893860:CDS |
| TTCTCTACGATCTTGTAGGA+CGG | 0.636262 | 6_1:+78720530 | None:intergenic |
| CTCCCAATATCCAAACAAGT+AGG | 0.652742 | 6_1:+78724121 | None:intergenic |
| AGTCTTAATCCTCCATCAAG+GGG | 0.656101 | 6_1:+78722262 | None:intergenic |
| CTAGTCTTAATCCTCCACCA+AGG | 0.657509 | 6_1:+78724473 | None:intergenic |
| ATCTTACTCCTCCTCCTCCG+GGG | 0.662155 | 6_1:+78720586 | None:intergenic |
| GTATCAGTGAAGATTATACC+AGG | 0.663879 | 6_1:+78724352 | None:intergenic |
| GGTGGTCCTGAAAATTACCC+TGG | 0.679018 | 6_1:-78720339 | Msa0893860:CDS |
| CCTGGTGTGCAAACATTGAG+TGG | 0.686652 | 6_1:-78720321 | Msa0893860:CDS |
| AGTCTTAATCCTCCACCAAG+GGG | 0.703379 | 6_1:+78724475 | None:intergenic |
| GTACCAGTGAAAATTATACC+AGG | 0.704701 | 6_1:+78720462 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTATGAATGTATTTTAA+AGG | - | chr6_1:78721753-78721772 | Msa0893860:intron | 10.0% |
| !!! | GTTATTTTATGTTATTAACA+TGG | + | chr6_1:78721242-78721261 | None:intergenic | 15.0% |
| !! | AAATCACTAAACTAAATAAA+TGG | - | chr6_1:78721514-78721533 | Msa0893860:intron | 15.0% |
| !! | AATCACTAAACTAAATAAAT+GGG | - | chr6_1:78721515-78721534 | Msa0893860:intron | 15.0% |
| !! | ATTAAGAAATATAATTGTTC+TGG | + | chr6_1:78722261-78722280 | None:intergenic | 15.0% |
| !!! | TAATATTGTTTCTATTATTG+TGG | + | chr6_1:78723489-78723508 | None:intergenic | 15.0% |
| !! | CTAGTTAATTATAACAATCA+AGG | + | chr6_1:78720784-78720803 | None:intergenic | 20.0% |
| !! | GTCAAAATGTAAAAAGTAAA+GGG | + | chr6_1:78721097-78721116 | None:intergenic | 20.0% |
| !! | AGTCAAAATGTAAAAAGTAA+AGG | + | chr6_1:78721098-78721117 | None:intergenic | 20.0% |
| !! | AAAACTAAAAGAATGAATAC+AGG | - | chr6_1:78721200-78721219 | Msa0893860:intron | 20.0% |
| !! | ATAAGAAGACAAAATACATA+AGG | - | chr6_1:78721262-78721281 | Msa0893860:intron | 20.0% |
| !! | TATCATCAATATTACAGATA+TGG | + | chr6_1:78721331-78721350 | None:intergenic | 20.0% |
| !! | ATCACTAAACTAAATAAATG+GGG | - | chr6_1:78721516-78721535 | Msa0893860:intron | 20.0% |
| !! | ATACATTCATAATATTTGAG+TGG | + | chr6_1:78721748-78721767 | None:intergenic | 20.0% |
| !! | TACTATGTATTAGACATAAA+TGG | - | chr6_1:78722416-78722435 | Msa0893860:intron | 20.0% |
| !! | TATATATATAGTGTGTAAGT+AGG | - | chr6_1:78723218-78723237 | Msa0893860:intron | 20.0% |
| !! | ATATATATAGTGTGTAAGTA+GGG | - | chr6_1:78723219-78723238 | Msa0893860:intron | 20.0% |
| !! | TAGAAACATTACACAATAAT+AGG | - | chr6_1:78723454-78723473 | Msa0893860:intron | 20.0% |
| !!! | TCTTTTTTTTTTCCAACAAA+AGG | - | chr6_1:78723609-78723628 | Msa0893860:intron | 20.0% |
| !!! | TATTTTCCTACTATATATTG+AGG | - | chr6_1:78723939-78723958 | Msa0893860:intron | 20.0% |
| !!! | ATCTTTGTTGATAATGTTAT+TGG | - | chr6_1:78724372-78724391 | Msa0893860:CDS | 20.0% |
| ! | ACTAGGAAAATCAAGTAATT+CGG | - | chr6_1:78720298-78720317 | Msa0893860:CDS | 25.0% |
| ! | GATTACAATGAAGTTATCAA+TGG | - | chr6_1:78720344-78720363 | Msa0893860:CDS | 25.0% |
| !! | TAAAACCAGGATAATTTTCA+GGG | + | chr6_1:78720532-78720551 | None:intergenic | 25.0% |
| !! | TTAAAACCAGGATAATTTTC+AGG | + | chr6_1:78720533-78720552 | None:intergenic | 25.0% |
| ! | AATATTGAGAAACATGAATC+TGG | - | chr6_1:78720572-78720591 | Msa0893860:CDS | 25.0% |
| ! | GCAAAAAGTAATCATTGAAT+AGG | - | chr6_1:78720850-78720869 | Msa0893860:intron | 25.0% |
| ! | AATTTGTGCATTTATAGCAT+TGG | + | chr6_1:78721013-78721032 | None:intergenic | 25.0% |
| !! | TCATTCTTTTACTATTAGCA+TGG | + | chr6_1:78721163-78721182 | None:intergenic | 25.0% |
| !! | CGATTTATAAGAGTGATTTT+CGG | - | chr6_1:78721548-78721567 | Msa0893860:intron | 25.0% |
| ! | CTCACAATAAAGAGAATATA+AGG | - | chr6_1:78721648-78721667 | Msa0893860:intron | 25.0% |
| !!! | ATCTTTTGAAAAGAAGAGAT+AGG | - | chr6_1:78721784-78721803 | Msa0893860:intron | 25.0% |
| !!! | TCTTTTGAAAAGAAGAGATA+GGG | - | chr6_1:78721785-78721804 | Msa0893860:intron | 25.0% |
| !! | AATGACATATAATTTGAGAC+AGG | - | chr6_1:78722300-78722319 | Msa0893860:CDS | 25.0% |
| !! | ATGACATATAATTTGAGACA+GGG | - | chr6_1:78722301-78722320 | Msa0893860:CDS | 25.0% |
| !! | TATTTTCCACTTGGAAAAAT+GGG | + | chr6_1:78722398-78722417 | None:intergenic | 25.0% |
| !! | AATACATAGTATTTTCCACT+TGG | + | chr6_1:78722407-78722426 | None:intergenic | 25.0% |
| !! | TATTTTCCACTTGGAAAAAT+GGG | + | chr6_1:78722398-78722417 | None:intergenic | 25.0% |
| !! | AAAATGTAGTATTTTCCACT+TGG | + | chr6_1:78722455-78722474 | None:intergenic | 25.0% |
| !! | TACATTTTTCCTACAATTTG+TGG | - | chr6_1:78722467-78722486 | Msa0893860:intron | 25.0% |
| !! | ACATTTTTCCTACAATTTGT+GGG | - | chr6_1:78722468-78722487 | Msa0893860:intron | 25.0% |
| ! | TACCTATAATGATTATACCT+GGG | + | chr6_1:78722616-78722635 | None:intergenic | 25.0% |
| !! | GATTGGTAGTGAAAATAAAG+AGG | + | chr6_1:78720154-78720173 | None:intergenic | 30.0% |
| TGATGTTGTTGAACAAGTAT+TGG | - | chr6_1:78720193-78720212 | Msa0893860:CDS | 30.0% | |
| !! | GAACAAGTATTGGACATAAA+TGG | - | chr6_1:78720203-78720222 | Msa0893860:CDS | 30.0% |
| ! | AAAATGTAGTATTTTCCACC+TGG | + | chr6_1:78720242-78720261 | None:intergenic | 30.0% |
| GTTATTCAAAAAGCTTGTGT+TGG | - | chr6_1:78720497-78720516 | Msa0893860:CDS | 30.0% | |
| !!! | CCACTCAATATTTTAAAACC+AGG | + | chr6_1:78720545-78720564 | None:intergenic | 30.0% |
| !!! | CCTGGTTTTAAAATATTGAG+TGG | - | chr6_1:78720542-78720561 | Msa0893860:CDS | 30.0% |
| ! | ATGAATCTGGATTTGGTTAT+AGG | - | chr6_1:78720585-78720604 | Msa0893860:CDS | 30.0% |
| TTTACATTTGACTCATCAAG+TGG | - | chr6_1:78720691-78720710 | Msa0893860:intron | 30.0% | |
| ! | AGGTAATTGTTGTTCATGTA+AGG | - | chr6_1:78720870-78720889 | Msa0893860:intron | 30.0% |
| CAAGTGCAGTTATTAAGAAA+GGG | + | chr6_1:78720899-78720918 | None:intergenic | 30.0% | |
| CATCAATATTACAGATATGG+AGG | + | chr6_1:78721328-78721347 | None:intergenic | 30.0% | |
| AATCGAACAAACACAATAAC+AGG | - | chr6_1:78721402-78721421 | Msa0893860:intron | 30.0% | |
| ACTAAACTAAATAAATGGGG+AGG | - | chr6_1:78721519-78721538 | Msa0893860:intron | 30.0% | |
| CTAAACTAAATAAATGGGGA+GGG | - | chr6_1:78721520-78721539 | Msa0893860:intron | 30.0% | |
| TTCATCCATATACCAACATA+GGG | + | chr6_1:78721599-78721618 | None:intergenic | 30.0% | |
| ! | TTTTGATCAGGTTAGATTAG+TGG | + | chr6_1:78721836-78721855 | None:intergenic | 30.0% |
| ! | CAAACTTTGTTCTTTTGATC+AGG | + | chr6_1:78721848-78721867 | None:intergenic | 30.0% |
| CTGATCAAAAGAACAAAGTT+TGG | - | chr6_1:78721846-78721865 | Msa0893860:intron | 30.0% | |
| TGATTGAGGGTTATAAAAGA+TGG | - | chr6_1:78722043-78722062 | Msa0893860:intron | 30.0% | |
| GATTGAGGGTTATAAAAGAT+GGG | - | chr6_1:78722044-78722063 | Msa0893860:intron | 30.0% | |
| ATTGTAGATTGATGTCATTG+AGG | - | chr6_1:78722084-78722103 | Msa0893860:intron | 30.0% | |
| !!! | AGTAGATTGAGCCTATTTTT+TGG | - | chr6_1:78722201-78722220 | Msa0893860:CDS | 30.0% |
| !!! | GTAGATTGAGCCTATTTTTT+GGG | - | chr6_1:78722202-78722221 | Msa0893860:CDS | 30.0% |
| ! | ATGGCAACATTTTTATGTCT+TGG | - | chr6_1:78722324-78722343 | Msa0893860:CDS | 30.0% |
| ! | TGGCAACATTTTTATGTCTT+GGG | - | chr6_1:78722325-78722344 | Msa0893860:CDS | 30.0% |
| GAGCAAGTATTAGACATAAA+TGG | - | chr6_1:78722368-78722387 | Msa0893860:CDS | 30.0% | |
| ! | ATTTTCCACTTGGAAAAATG+GGG | + | chr6_1:78722397-78722416 | None:intergenic | 30.0% |
| ! | GTATTTTCCACTTGGAAAAA+TGG | + | chr6_1:78722399-78722418 | None:intergenic | 30.0% |
| ! | ATTTTCCACTTGGAAAAATG+GGG | + | chr6_1:78722397-78722416 | None:intergenic | 30.0% |
| ! | GTATTTTCCACTTGGAAAAA+TGG | + | chr6_1:78722399-78722418 | None:intergenic | 30.0% |
| GTACCTATAATGATTATACC+TGG | + | chr6_1:78722617-78722636 | None:intergenic | 30.0% | |
| CATTGTGATTTAGCACAATT+AGG | + | chr6_1:78722668-78722687 | None:intergenic | 30.0% | |
| !!! | TGAAGAGATTGTTTTAACTG+AGG | - | chr6_1:78722927-78722946 | Msa0893860:intron | 30.0% |
| !! | ACCAGGATCCAATTATTTTT+AGG | - | chr6_1:78723341-78723360 | Msa0893860:intron | 30.0% |
| TCCTAAAAATAATTGGATCC+TGG | + | chr6_1:78723345-78723364 | None:intergenic | 30.0% | |
| CGACATGTCCTAAAAATAAT+TGG | + | chr6_1:78723352-78723371 | None:intergenic | 30.0% | |
| !! | GAATTTTTAATTCCTTCACG+AGG | + | chr6_1:78723710-78723729 | None:intergenic | 30.0% |
| ! | ATCAAATATTTCTGTCTTCG+TGG | - | chr6_1:78723730-78723749 | Msa0893860:intron | 30.0% |
| CATCTACCTCAATATATAGT+AGG | + | chr6_1:78723948-78723967 | None:intergenic | 30.0% | |
| !!! | CTTTTTGTTTGTGTTTTGGT+TGG | + | chr6_1:78723974-78723993 | None:intergenic | 30.0% |
| GATGCTTCATTGTTAGATAA+GGG | + | chr6_1:78723999-78724018 | None:intergenic | 30.0% | |
| AGATGCTTCATTGTTAGATA+AGG | + | chr6_1:78724000-78724019 | None:intergenic | 30.0% | |
| AACAAAGATGAAGAAGGAAA+GGG | + | chr6_1:78724034-78724053 | None:intergenic | 30.0% | |
| AAACAAAGATGAAGAAGGAA+AGG | + | chr6_1:78724035-78724054 | None:intergenic | 30.0% | |
| GATGAAAACAAAGATGAAGA+AGG | + | chr6_1:78724040-78724059 | None:intergenic | 30.0% | |
| AAATGATGTTGAGCAAGTAT+TGG | - | chr6_1:78724083-78724102 | Msa0893860:CDS | 30.0% | |
| GTTATTGGAAAAGCTTGTAT+TGG | - | chr6_1:78724387-78724406 | Msa0893860:CDS | 30.0% | |
| AATATTCAGAAACATGCTTC+TGG | - | chr6_1:78724462-78724481 | Msa0893860:intron | 30.0% | |
| TTTGAATTTGACTGAACATG+AGG | - | chr6_1:78724572-78724591 | Msa0893860:CDS | 30.0% | |
| AATAAAGAGGAGGAAGGAAA+GGG | + | chr6_1:78720141-78720160 | None:intergenic | 35.0% | |
| AAATAAAGAGGAGGAAGGAA+AGG | + | chr6_1:78720142-78720161 | None:intergenic | 35.0% | |
| AGTGAAAATAAAGAGGAGGA+AGG | + | chr6_1:78720147-78720166 | None:intergenic | 35.0% | |
| ! | TGGTAGTGAAAATAAAGAGG+AGG | + | chr6_1:78720151-78720170 | None:intergenic | 35.0% |
| TGAGAAAGCTAGTGAAAGAT+TGG | + | chr6_1:78720171-78720190 | None:intergenic | 35.0% | |
| !! | AATGGTAACTCCATTTTTCC+AGG | - | chr6_1:78720221-78720240 | Msa0893860:CDS | 35.0% |
| ! | GTATTTTCCACCTGGAAAAA+TGG | + | chr6_1:78720234-78720253 | None:intergenic | 35.0% |
| ATTATACCAGGACTTATTCC+TGG | + | chr6_1:78720392-78720411 | None:intergenic | 35.0% | |
| GTATCAGTGAAGATTATACC+AGG | + | chr6_1:78720404-78720423 | None:intergenic | 35.0% | |
| TTTGTGAACTCGATCTCAAT+TGG | + | chr6_1:78720428-78720447 | None:intergenic | 35.0% | |
| ! | TTTGATGATTCAGCGCAATT+AGG | + | chr6_1:78720455-78720474 | None:intergenic | 35.0% |
| ATTGCGCTGAATCATCAAAA+TGG | - | chr6_1:78720456-78720475 | Msa0893860:CDS | 35.0% | |
| ! | CAAAAAGCTTGTGTTGGTAT+TGG | - | chr6_1:78720503-78720522 | Msa0893860:CDS | 35.0% |
| GAGAAACATGAATCTGGATT+TGG | - | chr6_1:78720578-78720597 | Msa0893860:CDS | 35.0% | |
| GAAAGATTCTCCTACTTGTT+TGG | - | chr6_1:78720622-78720641 | Msa0893860:CDS | 35.0% | |
| TCTCCTACTTGTTTGGATAT+TGG | - | chr6_1:78720629-78720648 | Msa0893860:CDS | 35.0% | |
| CTCCTACTTGTTTGGATATT+GGG | - | chr6_1:78720630-78720649 | Msa0893860:CDS | 35.0% | |
| TACTTGTTTGGATATTGGGA+GGG | - | chr6_1:78720634-78720653 | Msa0893860:CDS | 35.0% | |
| GCAAGTGCAGTTATTAAGAA+AGG | + | chr6_1:78720900-78720919 | None:intergenic | 35.0% | |
| !! | ACTGCACTTGCTTTTACTTT+TGG | - | chr6_1:78720909-78720928 | Msa0893860:intron | 35.0% |
| !! | ATGAATGATTAAAGAGTGCC+CGG | + | chr6_1:78720953-78720972 | None:intergenic | 35.0% |
| CACTCTTTAAGCATCTAAAG+TGG | + | chr6_1:78721050-78721069 | None:intergenic | 35.0% | |
| AAATGTTAATGAGTGTCTCC+GGG | + | chr6_1:78721074-78721093 | None:intergenic | 35.0% | |
| GAAATGTTAATGAGTGTCTC+CGG | + | chr6_1:78721075-78721094 | None:intergenic | 35.0% | |
| AAGAATGACAGAGTGCATAA+TGG | - | chr6_1:78721175-78721194 | Msa0893860:intron | 35.0% | |
| GCAAATTCAATCAACGACTT+TGG | + | chr6_1:78721354-78721373 | None:intergenic | 35.0% | |
| TCATCCATATACCAACATAG+GGG | + | chr6_1:78721598-78721617 | None:intergenic | 35.0% | |
| CTTCATCCATATACCAACAT+AGG | + | chr6_1:78721600-78721619 | None:intergenic | 35.0% | |
| CTATGTTGGTATATGGATGA+AGG | - | chr6_1:78721598-78721617 | Msa0893860:intron | 35.0% | |
| TGGATGAAGGAGAAGAAATT+AGG | - | chr6_1:78721611-78721630 | Msa0893860:intron | 35.0% | |
| GGATGAAGGAGAAGAAATTA+GGG | - | chr6_1:78721612-78721631 | Msa0893860:intron | 35.0% | |
| CATCGTGTATAACATAGAGA+CGG | + | chr6_1:78721690-78721709 | None:intergenic | 35.0% | |
| GTCTCTATGTTATACACGAT+GGG | - | chr6_1:78721689-78721708 | Msa0893860:intron | 35.0% | |
| TTTGAAAAGAAGAGATAGGG+AGG | - | chr6_1:78721788-78721807 | Msa0893860:intron | 35.0% | |
| ! | CAAAAGAACAAAGTTTGGTG+TGG | - | chr6_1:78721851-78721870 | Msa0893860:intron | 35.0% |
| GAAGATAAATCGTACCTCAA+AGG | - | chr6_1:78721963-78721982 | Msa0893860:intron | 35.0% | |
| GGATGGAATCCTTCTAATTA+TGG | - | chr6_1:78722009-78722028 | Msa0893860:intron | 35.0% | |
| TGGAATCCTTCTAATTATGG+TGG | - | chr6_1:78722012-78722031 | Msa0893860:intron | 35.0% | |
| GGAATCCTTCTAATTATGGT+GGG | - | chr6_1:78722013-78722032 | Msa0893860:intron | 35.0% | |
| AAAATAGGCTCAATCTACTG+AGG | + | chr6_1:78722200-78722219 | None:intergenic | 35.0% | |
| ! | CATATAATTTGAGACAGGGA+TGG | - | chr6_1:78722305-78722324 | Msa0893860:CDS | 35.0% |
| ! | TAGTCTTAATCCTCCATCAA+GGG | + | chr6_1:78722495-78722514 | None:intergenic | 35.0% |
| CCTGGTATGTTGAATTTCAT+TGG | + | chr6_1:78722587-78722606 | None:intergenic | 35.0% | |
| CCAATGAAATTCAACATACC+AGG | - | chr6_1:78722584-78722603 | Msa0893860:intron | 35.0% | |
| AGCCCAGGTATAATCATTAT+AGG | - | chr6_1:78722611-78722630 | Msa0893860:intron | 35.0% | |
| TGGCAGATTCATAGTGATTT+GGG | - | chr6_1:78722747-78722766 | Msa0893860:intron | 35.0% | |
| TCTCATGTATCATTGACGAA+AGG | - | chr6_1:78722839-78722858 | Msa0893860:intron | 35.0% | |
| ATGTATCATTGACGAAAGGA+TGG | - | chr6_1:78722843-78722862 | Msa0893860:intron | 35.0% | |
| TGTATCATTGACGAAAGGAT+GGG | - | chr6_1:78722844-78722863 | Msa0893860:intron | 35.0% | |
| !!! | GATGAGATCCGTTGATTTTA+GGG | - | chr6_1:78723009-78723028 | Msa0893860:intron | 35.0% |
| !!! | ATGAGATCCGTTGATTTTAG+GGG | - | chr6_1:78723010-78723029 | Msa0893860:intron | 35.0% |
| ! | TTTAGGACATGTCGATTGTA+TGG | - | chr6_1:78723358-78723377 | Msa0893860:intron | 35.0% |
| CAAATAACAAAAACGCAAGC+AGG | - | chr6_1:78723655-78723674 | Msa0893860:intron | 35.0% | |
| GCACAACGTATATAAAACCA+AGG | - | chr6_1:78723677-78723696 | Msa0893860:intron | 35.0% | |
| !! | GGTGCTTTTTGTTTGTGTTT+TGG | + | chr6_1:78723978-78723997 | None:intergenic | 35.0% |
| TGAAGTAGCTAGTGAAAGAT+TGG | + | chr6_1:78724064-78724083 | None:intergenic | 35.0% | |
| !! | GAGCAAGTATTGGACATAAA+TGG | - | chr6_1:78724093-78724112 | Msa0893860:CDS | 35.0% |
| TATTGGCCACTAGGAAAAAT+GGG | + | chr6_1:78724123-78724142 | None:intergenic | 35.0% | |
| !! | AAAATGTAGTATTGGCCACT+AGG | + | chr6_1:78724132-78724151 | None:intergenic | 35.0% |
| AACTGGACACTTTAAATCAC+CGG | + | chr6_1:78724202-78724221 | None:intergenic | 35.0% | |
| GATCGTAGAGAAGTCAAAAA+TGG | - | chr6_1:78724234-78724253 | Msa0893860:CDS | 35.0% | |
| ATTATACCAGGACTTATTCC+TGG | + | chr6_1:78720392-78720411 | None:intergenic | 35.0% | |
| ! | AGTCCTGGTATAATTTTCAC+TGG | - | chr6_1:78724288-78724307 | Msa0893860:CDS | 35.0% |
| GTACCAGTGAAAATTATACC+AGG | + | chr6_1:78724294-78724313 | None:intergenic | 35.0% | |
| ! | GGAAAAGCTTGTATTGGTAT+TGG | - | chr6_1:78724393-78724412 | Msa0893860:CDS | 35.0% |
| ! | AAAGCTTGTATTGGTATTGG+TGG | - | chr6_1:78724396-78724415 | Msa0893860:CDS | 35.0% |
| TCTCCTACTTGTTTGGATAT+TGG | - | chr6_1:78720629-78720648 | Msa0893860:CDS | 35.0% | |
| CTTCCAATATCCAAACAAGT+AGG | + | chr6_1:78724525-78724544 | None:intergenic | 35.0% | |
| CTACTTGTTTGGATATTGGA+AGG | - | chr6_1:78724523-78724542 | Msa0893860:CDS | 35.0% | |
| !! | AGGTTTGATAATGATGAAGC+TGG | - | chr6_1:78724543-78724562 | Msa0893860:CDS | 35.0% |
| ! | TACATTTTGCCTGCAATTCG+AGG | - | chr6_1:78720254-78720273 | Msa0893860:CDS | 40.0% |
| ! | TAGTCTTAATCCTCCACCAA+GGG | + | chr6_1:78720282-78720301 | None:intergenic | 40.0% |
| CCTGGTATACTGAATTTCAC+TGG | + | chr6_1:78720374-78720393 | None:intergenic | 40.0% | |
| CCAGTGAAATTCAGTATACC+AGG | - | chr6_1:78720371-78720390 | Msa0893860:CDS | 40.0% | |
| AGTATACCAGGAATAAGTCC+TGG | - | chr6_1:78720383-78720402 | Msa0893860:CDS | 40.0% | |
| ! | AAAGCTTGTGTTGGTATTGG+TGG | - | chr6_1:78720506-78720525 | Msa0893860:CDS | 40.0% |
| ! | TCTGGATTTGGTTATAGGCT+TGG | - | chr6_1:78720590-78720609 | Msa0893860:CDS | 40.0% |
| CTCCCAATATCCAAACAAGT+AGG | + | chr6_1:78720635-78720654 | None:intergenic | 40.0% | |
| CTACTTGTTTGGATATTGGG+AGG | - | chr6_1:78720633-78720652 | Msa0893860:CDS | 40.0% | |
| ! | GATGCTGCTTCTTATGAAAC+TGG | - | chr6_1:78720734-78720753 | Msa0893860:intron | 40.0% |
| !! | TAGATGCTTAAAGAGTGTCC+CGG | - | chr6_1:78721053-78721072 | Msa0893860:intron | 40.0% |
| ! | GTCGTTGATTGAATTTGCAC+TGG | - | chr6_1:78721356-78721375 | Msa0893860:intron | 40.0% |
| AATTTGCACTGGAACGAAAC+TGG | - | chr6_1:78721367-78721386 | Msa0893860:intron | 40.0% | |
| !!! | TACCAACATAGGGGTGTTTT+AGG | + | chr6_1:78721589-78721608 | None:intergenic | 40.0% |
| AACACCCCTATGTTGGTATA+TGG | - | chr6_1:78721591-78721610 | Msa0893860:intron | 40.0% | |
| CGTCTCTATGTTATACACGA+TGG | - | chr6_1:78721688-78721707 | Msa0893860:intron | 40.0% | |
| AGGACTCAAACAATCCTTTG+AGG | + | chr6_1:78721980-78721999 | None:intergenic | 40.0% | |
| TGTTTGAGTCCTCAAGAACA+AGG | - | chr6_1:78721988-78722007 | Msa0893860:intron | 40.0% | |
| GACATCCCACCATAATTAGA+AGG | + | chr6_1:78722021-78722040 | None:intergenic | 40.0% | |
| !!! | TGAGCCTATTTTTTGGGTCA+TGG | - | chr6_1:78722208-78722227 | Msa0893860:CDS | 40.0% |
| CAGTCCATGACCCAAAAAAT+AGG | + | chr6_1:78722215-78722234 | None:intergenic | 40.0% | |
| ! | ATTGTTCTGGACTGTCCAAA+AGG | + | chr6_1:78722248-78722267 | None:intergenic | 40.0% |
| AGTCTTAATCCTCCATCAAG+GGG | + | chr6_1:78722494-78722513 | None:intergenic | 40.0% | |
| !! | CTAGTCTTAATCCTCCATCA+AGG | + | chr6_1:78722496-78722515 | None:intergenic | 40.0% |
| CTTGATGGAGGATTAAGACT+AGG | - | chr6_1:78722494-78722513 | Msa0893860:intron | 40.0% | |
| ATTATACCTGGGCTTATACC+TGG | + | chr6_1:78722605-78722624 | None:intergenic | 40.0% | |
| TAATTGTGTCTCCACGATGT+GGG | - | chr6_1:78722693-78722712 | Msa0893860:intron | 40.0% | |
| GTGGCAGATTCATAGTGATT+TGG | - | chr6_1:78722746-78722765 | Msa0893860:intron | 40.0% | |
| GGCAGATTCATAGTGATTTG+GGG | - | chr6_1:78722748-78722767 | Msa0893860:intron | 40.0% | |
| TGAGAGAACCACCAAATCAA+TGG | + | chr6_1:78722824-78722843 | None:intergenic | 40.0% | |
| AGGATGGGACCAATAAATAG+AGG | - | chr6_1:78722859-78722878 | Msa0893860:intron | 40.0% | |
| ATCCTGGAGCCTCTATTTAT+TGG | + | chr6_1:78722871-78722890 | None:intergenic | 40.0% | |
| AATAAATAGAGGCTCCAGGA+TGG | - | chr6_1:78722870-78722889 | Msa0893860:intron | 40.0% | |
| ACCATCATCTTATGTCCAAC+CGG | + | chr6_1:78722983-78723002 | None:intergenic | 40.0% | |
| ! | GTTGGACATAAGATGATGGT+TGG | - | chr6_1:78722983-78723002 | Msa0893860:intron | 40.0% |
| ! | GACATAAGATGATGGTTGGT+TGG | - | chr6_1:78722987-78723006 | Msa0893860:intron | 40.0% |
| !!! | GGATGAGATCCGTTGATTTT+AGG | - | chr6_1:78723008-78723027 | Msa0893860:intron | 40.0% |
| GCTTGATCCCCTAAAATCAA+CGG | + | chr6_1:78723020-78723039 | None:intergenic | 40.0% | |
| TCCAAGATCCAAGTCAGTAA+GGG | - | chr6_1:78723128-78723147 | Msa0893860:intron | 40.0% | |
| TCAGTAAGGGGTTCAAGATA+GGG | - | chr6_1:78723141-78723160 | Msa0893860:intron | 40.0% | |
| !! | AGAAGTGTCATACATGACCA+AGG | - | chr6_1:78723183-78723202 | Msa0893860:intron | 40.0% |
| ! | GAAGTGTCATACATGACCAA+GGG | - | chr6_1:78723184-78723203 | Msa0893860:intron | 40.0% |
| ATATACTCAAGCTCATCCCT+TGG | + | chr6_1:78723203-78723222 | None:intergenic | 40.0% | |
| TATAGTGTGTAAGTAGGGCT+TGG | - | chr6_1:78723224-78723243 | Msa0893860:intron | 40.0% | |
| !! | AGGCATAGTTGGTAGATGAA+GGG | + | chr6_1:78723256-78723275 | None:intergenic | 40.0% |
| CTTGTACTTTCAGGCATAGT+TGG | + | chr6_1:78723267-78723286 | None:intergenic | 40.0% | |
| TTCCTCATCTACATGTCCAA+CGG | + | chr6_1:78723309-78723328 | None:intergenic | 40.0% | |
| TCGATTGTATGGTAGCTTCA+TGG | - | chr6_1:78723369-78723388 | Msa0893860:intron | 40.0% | |
| AAGACCCATTCGACTAAACT+CGG | + | chr6_1:78723408-78723427 | None:intergenic | 40.0% | |
| AGTTTAGTCGAATGGGTCTT+AGG | - | chr6_1:78723408-78723427 | Msa0893860:intron | 40.0% | |
| ! | ACACGTACAAGTCCTTTTGT+TGG | + | chr6_1:78723624-78723643 | None:intergenic | 40.0% |
| ATTGGCCACTAGGAAAAATG+GGG | + | chr6_1:78724122-78724141 | None:intergenic | 40.0% | |
| ! | GTATTGGCCACTAGGAAAAA+TGG | + | chr6_1:78724124-78724143 | None:intergenic | 40.0% |
| ! | GTGCTGGCAAAATGTAGTAT+TGG | + | chr6_1:78724140-78724159 | None:intergenic | 40.0% |
| GGAGTAAGATTGGGAAAAAC+CGG | - | chr6_1:78724180-78724199 | Msa0893860:CDS | 40.0% | |
| TTCTCTACGATCTTGTAGGA+CGG | + | chr6_1:78724226-78724245 | None:intergenic | 40.0% | |
| TGACTTCTCTACGATCTTGT+AGG | + | chr6_1:78724230-78724249 | None:intergenic | 40.0% | |
| ATCATACCAGGAATAAGTCC+TGG | - | chr6_1:78724273-78724292 | Msa0893860:CDS | 40.0% | |
| TTTGTTGATGCAGCACAACT+AGG | + | chr6_1:78724345-78724364 | None:intergenic | 40.0% | |
| GTTGTGCTGCATCAACAAAA+TGG | - | chr6_1:78724346-78724365 | Msa0893860:CDS | 40.0% | |
| CAGAAACATGCTTCTGGATT+TGG | - | chr6_1:78724468-78724487 | Msa0893860:CDS | 40.0% | |
| ! | TCTGGATTTGGTTATCAGCT+AGG | - | chr6_1:78724480-78724499 | Msa0893860:CDS | 40.0% |
| ! | CTGGATTTGGTTATCAGCTA+GGG | - | chr6_1:78724481-78724500 | Msa0893860:CDS | 40.0% |
| !! | TCAGCTAGGGTTTTGTGTTA+CGG | - | chr6_1:78724494-78724513 | Msa0893860:CDS | 40.0% |
| !! | GGTAACTCCATTTTTCCAGG+TGG | - | chr6_1:78720224-78720243 | Msa0893860:CDS | 45.0% |
| AGTCTTAATCCTCCACCAAG+GGG | + | chr6_1:78720281-78720300 | None:intergenic | 45.0% | |
| !! | CTAGTCTTAATCCTCCACCA+AGG | + | chr6_1:78720283-78720302 | None:intergenic | 45.0% |
| CTTGGTGGAGGATTAAGACT+AGG | - | chr6_1:78720281-78720300 | Msa0893860:CDS | 45.0% | |
| ! | GACTCATCAAGTGGCTTTTG+CGG | - | chr6_1:78720700-78720719 | Msa0893860:intron | 45.0% |
| ! | GTCTTGTTAACGAGTGTCTC+CGG | - | chr6_1:78720931-78720950 | Msa0893860:intron | 45.0% |
| TCTTGTTAACGAGTGTCTCC+GGG | - | chr6_1:78720932-78720951 | Msa0893860:intron | 45.0% | |
| TGCCTAAAACACCCCTATGT+TGG | - | chr6_1:78721584-78721603 | Msa0893860:intron | 45.0% | |
| AAGAAGAGATAGGGAGGAAC+TGG | - | chr6_1:78721794-78721813 | Msa0893860:intron | 45.0% | |
| TAGATTAGTGGCGTCGTTTG+TGG | + | chr6_1:78721824-78721843 | None:intergenic | 45.0% | |
| GGTACCTCCAGAAGATACTT+TGG | - | chr6_1:78721899-78721918 | Msa0893860:intron | 45.0% | |
| ! | TTGAGCGCCAAAGTATCTTC+TGG | + | chr6_1:78721909-78721928 | None:intergenic | 45.0% |
| TGAGTCCTCAAGAACAAGGA+TGG | - | chr6_1:78721992-78722011 | Msa0893860:intron | 45.0% | |
| GGATTCCATCCTTGTTCTTG+AGG | + | chr6_1:78722000-78722019 | None:intergenic | 45.0% | |
| ! | TGGTGGGATGTCATTGATTG+AGG | - | chr6_1:78722029-78722048 | Msa0893860:intron | 45.0% |
| ! | GGTGGGATGTCATTGATTGA+GGG | - | chr6_1:78722030-78722049 | Msa0893860:intron | 45.0% |
| !! | GGTAACCCCATTTTTCCAAG+TGG | - | chr6_1:78722389-78722408 | Msa0893860:intron | 45.0% |
| !! | GGTAACCCCATTTTTCCAAG+TGG | - | chr6_1:78722389-78722408 | Msa0893860:intron | 45.0% |
| AACATACCAGGTATAAGCCC+AGG | - | chr6_1:78722596-78722615 | Msa0893860:intron | 45.0% | |
| CACATCGTGGAGACACAATT+AGG | + | chr6_1:78722694-78722713 | None:intergenic | 45.0% | |
| CTAATTGTGTCTCCACGATG+TGG | - | chr6_1:78722692-78722711 | Msa0893860:intron | 45.0% | |
| ! | TTGCGCTGGAACCATTGATT+TGG | - | chr6_1:78722810-78722829 | Msa0893860:intron | 45.0% |
| GACCAATAAATAGAGGCTCC+AGG | - | chr6_1:78722866-78722885 | Msa0893860:intron | 45.0% | |
| TCCGGTTGGACATAAGATGA+TGG | - | chr6_1:78722979-78722998 | Msa0893860:intron | 45.0% | |
| ! | ACAGAAAACCTAACGGACCA+AGG | + | chr6_1:78723063-78723082 | None:intergenic | 45.0% |
| CTCCAAGATCCAAGTCAGTA+AGG | - | chr6_1:78723127-78723146 | Msa0893860:intron | 45.0% | |
| CCAAGATCCAAGTCAGTAAG+GGG | - | chr6_1:78723129-78723148 | Msa0893860:intron | 45.0% | |
| ! | TCTTGAACCCCTTACTGACT+TGG | + | chr6_1:78723139-78723158 | None:intergenic | 45.0% |
| GTCAGTAAGGGGTTCAAGAT+AGG | - | chr6_1:78723140-78723159 | Msa0893860:intron | 45.0% | |
| !! | CAGGCATAGTTGGTAGATGA+AGG | + | chr6_1:78723257-78723276 | None:intergenic | 45.0% |
| GACTACACGCTTGTACTTTC+AGG | + | chr6_1:78723276-78723295 | None:intergenic | 45.0% | |
| CATGTCCAACGGTTATGCTA+CGG | + | chr6_1:78723298-78723317 | None:intergenic | 45.0% | |
| AACCGTTGGACATGTAGATG+AGG | - | chr6_1:78723304-78723323 | Msa0893860:intron | 45.0% | |
| TATGGTAGCTTCATGGACTC+AGG | - | chr6_1:78723376-78723395 | Msa0893860:intron | 45.0% | |
| AGACCCATTCGACTAAACTC+GGG | + | chr6_1:78723407-78723426 | None:intergenic | 45.0% | |
| CACGTGGGAAACTATTGGAT+AGG | + | chr6_1:78723826-78723845 | None:intergenic | 45.0% | |
| GACATATGTTTCACGCACGT+GGG | + | chr6_1:78723841-78723860 | None:intergenic | 45.0% | |
| TGACATATGTTTCACGCACG+TGG | + | chr6_1:78723842-78723861 | None:intergenic | 45.0% | |
| !! | GGTAACCCCATTTTTCCTAG+TGG | - | chr6_1:78724114-78724133 | Msa0893860:CDS | 45.0% |
| ! | TACATTTTGCCAGCACTTCG+TGG | - | chr6_1:78724144-78724163 | Msa0893860:intron | 45.0% |
| CCTGGTATGATGAACTTCAC+TGG | + | chr6_1:78724264-78724283 | None:intergenic | 45.0% | |
| CCAGTGAAGTTCATCATACC+AGG | - | chr6_1:78724261-78724280 | Msa0893860:CDS | 45.0% | |
| TTCGTGTACTCGATCTCAAG+TGG | + | chr6_1:78724318-78724337 | None:intergenic | 45.0% | |
| ! | TGCACACCAGGGTAATTTTC+AGG | + | chr6_1:78724423-78724442 | None:intergenic | 45.0% |
| CACTCAATGTTTGCACACCA+GGG | + | chr6_1:78724434-78724453 | None:intergenic | 45.0% | |
| !! | CAGCTAGGGTTTTGTGTTAC+GGG | - | chr6_1:78724495-78724514 | Msa0893860:CDS | 45.0% |
| !! | AGCTAGGGTTTTGTGTTACG+GGG | - | chr6_1:78724496-78724515 | Msa0893860:CDS | 45.0% |
| !!! | ATATAAAAGATATTATATTT+TGG | - | chr6_1:78723536-78723555 | Msa0893860:intron | 5.0% |
| GGTGGCCCTGAAAATTATCC+TGG | - | chr6_1:78720524-78720543 | Msa0893860:CDS | 50.0% | |
| TATTGGGAGGGCTCATGAAG+AGG | - | chr6_1:78720646-78720665 | Msa0893860:CDS | 50.0% | |
| CATGAAGAGGTCGAGGATGA+AGG | - | chr6_1:78720659-78720678 | Msa0893860:CDS | 50.0% | |
| AAGCAACACAGCGACGAACA+AGG | - | chr6_1:78721426-78721445 | Msa0893860:intron | 50.0% | |
| TGGTGTGGTGAGTTTGTAGC+TGG | - | chr6_1:78721866-78721885 | Msa0893860:intron | 50.0% | |
| GGTGTGGTGAGTTTGTAGCT+GGG | - | chr6_1:78721867-78721886 | Msa0893860:intron | 50.0% | |
| TTTGTAGCTGGGACGACTGA+GGG | - | chr6_1:78721878-78721897 | Msa0893860:intron | 50.0% | |
| ! | AGCGCCAAAGTATCTTCTGG+AGG | + | chr6_1:78721906-78721925 | None:intergenic | 50.0% |
| TTCACATCCTCCACCCAACA+GGG | + | chr6_1:78722163-78722182 | None:intergenic | 50.0% | |
| ATTCACATCCTCCACCCAAC+AGG | + | chr6_1:78722164-78722183 | None:intergenic | 50.0% | |
| TCAAGGGGCCCACAAATTGT+AGG | + | chr6_1:78722479-78722498 | None:intergenic | 50.0% | |
| ACAATTTGTGGGCCCCTTGA+TGG | - | chr6_1:78722479-78722498 | Msa0893860:intron | 50.0% | |
| CTAGATATTGTCACGCCAGC+CGG | + | chr6_1:78722724-78722743 | None:intergenic | 50.0% | |
| GCTGGCGTGACAATATCTAG+TGG | - | chr6_1:78722724-78722743 | Msa0893860:intron | 50.0% | |
| GGCGTGACAATATCTAGTGG+TGG | - | chr6_1:78722727-78722746 | Msa0893860:intron | 50.0% | |
| GTTCGACCTTAGCTCCTTGT+AGG | - | chr6_1:78722772-78722791 | Msa0893860:intron | 50.0% | |
| TGCGTTCCTACAAGGAGCTA+AGG | + | chr6_1:78722781-78722800 | None:intergenic | 50.0% | |
| GCTCCTTGTAGGAACGCAAT+TGG | - | chr6_1:78722783-78722802 | Msa0893860:intron | 50.0% | |
| ATCAATGGTTCCAGCGCAAG+CGG | + | chr6_1:78722809-78722828 | None:intergenic | 50.0% | |
| !! | CGCTGGAACCATTGATTTGG+TGG | - | chr6_1:78722813-78722832 | Msa0893860:intron | 50.0% |
| CTTATGTCCAACCGGATCAG+TGG | + | chr6_1:78722975-78722994 | None:intergenic | 50.0% | |
| ! | ACCTAACGGACCAAGGCTTA+CGG | + | chr6_1:78723056-78723075 | None:intergenic | 50.0% |
| ! | GTCCGTTAGGTTTTCTGTCG+CGG | - | chr6_1:78723065-78723084 | Msa0893860:intron | 50.0% |
| ! | TCCGTTAGGTTTTCTGTCGC+GGG | - | chr6_1:78723066-78723085 | Msa0893860:intron | 50.0% |
| ACCCGCGACAGAAAACCTAA+CGG | + | chr6_1:78723070-78723089 | None:intergenic | 50.0% | |
| !! | CCCCTTACTGACTTGGATCT+TGG | + | chr6_1:78723132-78723151 | None:intergenic | 50.0% |
| GTAGTCCGTAGCATAACCGT+TGG | - | chr6_1:78723290-78723309 | Msa0893860:intron | 50.0% | |
| ! | AGGAACTCTCGACTTGTACC+AGG | - | chr6_1:78723324-78723343 | Msa0893860:intron | 50.0% |
| TAGCTTCATGGACTCAGGTC+AGG | - | chr6_1:78723381-78723400 | Msa0893860:intron | 50.0% | |
| AGGCCCGAGTTTAGTCGAAT+GGG | - | chr6_1:78723401-78723420 | Msa0893860:intron | 50.0% | |
| TCACGCACGTGGGAAACTAT+TGG | + | chr6_1:78723831-78723850 | None:intergenic | 50.0% | |
| AATCTTACTCCTCCTCCTCC+GGG | + | chr6_1:78724171-78724190 | None:intergenic | 50.0% | |
| CAATCTTACTCCTCCTCCTC+CGG | + | chr6_1:78724172-78724191 | None:intergenic | 50.0% | |
| GGAGGAGGAGGAGTAAGATT+GGG | - | chr6_1:78724171-78724190 | Msa0893860:intron | 50.0% | |
| CGATCTTGTAGGACGGTAAC+TGG | + | chr6_1:78724219-78724238 | None:intergenic | 50.0% | |
| GGTGGTCCTGAAAATTACCC+TGG | - | chr6_1:78724414-78724433 | Msa0893860:intron | 50.0% | |
| CCACTCAATGTTTGCACACC+AGG | + | chr6_1:78724435-78724454 | None:intergenic | 50.0% | |
| CCTGGTGTGCAAACATTGAG+TGG | - | chr6_1:78724432-78724451 | Msa0893860:intron | 50.0% | |
| TACGGGGTCTCCTACTTGTT+TGG | - | chr6_1:78724512-78724531 | Msa0893860:CDS | 50.0% | |
| GAAGAGGTCGAGGATGAAGG+TGG | - | chr6_1:78720662-78720681 | Msa0893860:CDS | 55.0% | |
| GTTTGTAGCTGGGACGACTG+AGG | - | chr6_1:78721877-78721896 | Msa0893860:intron | 55.0% | |
| TTGTGAGCACACCTCCCTGT+TGG | - | chr6_1:78722146-78722165 | Msa0893860:intron | 55.0% | |
| TGTGAGCACACCTCCCTGTT+GGG | - | chr6_1:78722147-78722166 | Msa0893860:intron | 55.0% | |
| ! | GACTGACGAGCAAGGCCTTT+TGG | - | chr6_1:78722230-78722249 | Msa0893860:CDS | 55.0% |
| ATTTGTGGGCCCCTTGATGG+AGG | - | chr6_1:78722482-78722501 | Msa0893860:intron | 55.0% | |
| CGGCCAATTGCGTTCCTACA+AGG | + | chr6_1:78722789-78722808 | None:intergenic | 55.0% | |
| ! | TAACGGACCAAGGCTTACGG+CGG | + | chr6_1:78723053-78723072 | None:intergenic | 55.0% |
| TTGGATCTTGGAGCACGTGC+AGG | + | chr6_1:78723120-78723139 | None:intergenic | 55.0% | |
| CAGGCCCGAGTTTAGTCGAA+TGG | - | chr6_1:78723400-78723419 | Msa0893860:intron | 55.0% | |
| TTCTGTCTTCGTGGAACGCG+TGG | - | chr6_1:78723739-78723758 | Msa0893860:intron | 55.0% | |
| ATCTTACTCCTCCTCCTCCG+GGG | + | chr6_1:78724170-78724189 | None:intergenic | 55.0% | |
| CGGAGGAGGAGGAGTAAGAT+TGG | - | chr6_1:78724170-78724189 | Msa0893860:intron | 55.0% | |
| CCAAGGGGTCCTCGAATTGC+AGG | + | chr6_1:78720266-78720285 | None:intergenic | 60.0% | |
| CCTGCAATTCGAGGACCCCT+TGG | - | chr6_1:78720263-78720282 | Msa0893860:CDS | 60.0% | |
| GCAATTCGAGGACCCCTTGG+TGG | - | chr6_1:78720266-78720285 | Msa0893860:CDS | 60.0% | |
| ATTCGAGGACCCCTTGGTGG+AGG | - | chr6_1:78720269-78720288 | Msa0893860:CDS | 60.0% | |
| GAGGGCTCATGAAGAGGTCG+AGG | - | chr6_1:78720652-78720671 | Msa0893860:CDS | 60.0% | |
| ACATCCTCCACCCAACAGGG+AGG | + | chr6_1:78722160-78722179 | None:intergenic | 60.0% | |
| ! | GGGTCATGGACTGACGAGCA+AGG | - | chr6_1:78722222-78722241 | Msa0893860:CDS | 60.0% |
| ! | CTCCACGATGTGGGTTGCTC+CGG | - | chr6_1:78722702-78722721 | Msa0893860:intron | 60.0% |
| TAGAGGCTCCAGGATGGCAG+TGG | - | chr6_1:78722876-78722895 | Msa0893860:intron | 60.0% | |
| CGTTGTGTCCACTGCCATCC+TGG | + | chr6_1:78722887-78722906 | None:intergenic | 60.0% | |
| !! | CTGAGGAGTGTTGTCCCCAG+CGG | - | chr6_1:78722944-78722963 | Msa0893860:intron | 60.0% |
| GATCAGTGGCTACTCCGCTG+GGG | + | chr6_1:78722961-78722980 | None:intergenic | 60.0% | |
| GGATCAGTGGCTACTCCGCT+GGG | + | chr6_1:78722962-78722981 | None:intergenic | 60.0% | |
| CAGCGGAGTAGCCACTGATC+CGG | - | chr6_1:78722961-78722980 | Msa0893860:intron | 60.0% | |
| GGAGTAGCCACTGATCCGGT+TGG | - | chr6_1:78722965-78722984 | Msa0893860:intron | 60.0% | |
| GTTCCATCCGCCGTAAGCCT+TGG | - | chr6_1:78723043-78723062 | Msa0893860:intron | 60.0% | |
| GCCGTAAGCCTTGGTCCGTT+AGG | - | chr6_1:78723052-78723071 | Msa0893860:intron | 60.0% | |
| CGGGTCCTTCTCCACTGGAA+GGG | - | chr6_1:78723085-78723104 | Msa0893860:intron | 60.0% | |
| GGGTCCTTCTCCACTGGAAG+GGG | - | chr6_1:78723086-78723105 | Msa0893860:intron | 60.0% | |
| GGTCCTTCTCCACTGGAAGG+GGG | - | chr6_1:78723087-78723106 | Msa0893860:intron | 60.0% | |
| ! | CTTCACGAGGAGCACGACCT+TGG | + | chr6_1:78723697-78723716 | None:intergenic | 60.0% |
| CAAGGTCGTGCTCCTCGTGA+AGG | - | chr6_1:78723695-78723714 | Msa0893860:intron | 60.0% | |
| GAGCACACCTCCCTGTTGGG+TGG | - | chr6_1:78722150-78722169 | Msa0893860:intron | 65.0% | |
| CACACCTCCCTGTTGGGTGG+AGG | - | chr6_1:78722153-78722172 | Msa0893860:intron | 65.0% | |
| AGCCGGAGCAACCCACATCG+TGG | + | chr6_1:78722707-78722726 | None:intergenic | 65.0% | |
| ! | ACGATGTGGGTTGCTCCGGC+TGG | - | chr6_1:78722706-78722725 | Msa0893860:intron | 65.0% |
| ACGCAATTGGCCGCTTGCGC+TGG | - | chr6_1:78722796-78722815 | Msa0893860:intron | 65.0% | |
| CGGATCAGTGGCTACTCCGC+TGG | + | chr6_1:78722963-78722982 | None:intergenic | 65.0% | |
| GGACCAAGGCTTACGGCGGA+TGG | + | chr6_1:78723049-78723068 | None:intergenic | 65.0% | |
| TGTCGCGGGTCCTTCTCCAC+TGG | - | chr6_1:78723080-78723099 | Msa0893860:intron | 65.0% | |
| GCGGGTCCTTCTCCACTGGA+AGG | - | chr6_1:78723084-78723103 | Msa0893860:intron | 65.0% | |
| CCACCCCCTTCCAGTGGAGA+AGG | + | chr6_1:78723093-78723112 | None:intergenic | 65.0% | |
| CCTTCTCCACTGGAAGGGGG+TGG | - | chr6_1:78723090-78723109 | Msa0893860:intron | 65.0% | |
| GGTACACCACCCCCTTCCAG+TGG | + | chr6_1:78723099-78723118 | None:intergenic | 65.0% | |
| TTGCCAGCACTTCGTGGCCC+CGG | - | chr6_1:78724150-78724169 | Msa0893860:intron | 65.0% | |
| CCTCCGGGGCCACGAAGTGC+TGG | + | chr6_1:78724156-78724175 | None:intergenic | 75.0% | |
| CCAGCACTTCGTGGCCCCGG+AGG | - | chr6_1:78724153-78724172 | Msa0893860:intron | 75.0% | |
| GCACTTCGTGGCCCCGGAGG+AGG | - | chr6_1:78724156-78724175 | Msa0893860:intron | 75.0% | |
| CTTCGTGGCCCCGGAGGAGG+AGG | - | chr6_1:78724159-78724178 | Msa0893860:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 78720116 | 78724659 | 78720116 | ID=Msa0893860;Name=Msa0893860 |
| chr6_1 | mRNA | 78720116 | 78724659 | 78720116 | ID=Msa0893860-mRNA-1;Parent=Msa0893860;Name=Msa0893860-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0|0|5|0|471 |
| chr6_1 | exon | 78724464 | 78724659 | 78724464 | ID=Msa0893860-mRNA-1:exon:13157;Parent=Msa0893860-mRNA-1 |
| chr6_1 | exon | 78724176 | 78724418 | 78724176 | ID=Msa0893860-mRNA-1:exon:13156;Parent=Msa0893860-mRNA-1 |
| chr6_1 | exon | 78724003 | 78724148 | 78724003 | ID=Msa0893860-mRNA-1:exon:13155;Parent=Msa0893860-mRNA-1 |
| chr6_1 | exon | 78722158 | 78722404 | 78722158 | ID=Msa0893860-mRNA-1:exon:13154;Parent=Msa0893860-mRNA-1 |
| chr6_1 | exon | 78720116 | 78720699 | 78720116 | ID=Msa0893860-mRNA-1:exon:13153;Parent=Msa0893860-mRNA-1 |
| chr6_1 | CDS | 78724464 | 78724659 | 78724464 | ID=Msa0893860-mRNA-1:cds;Parent=Msa0893860-mRNA-1 |
| chr6_1 | CDS | 78724176 | 78724418 | 78724176 | ID=Msa0893860-mRNA-1:cds;Parent=Msa0893860-mRNA-1 |
| chr6_1 | CDS | 78724003 | 78724148 | 78724003 | ID=Msa0893860-mRNA-1:cds;Parent=Msa0893860-mRNA-1 |
| chr6_1 | CDS | 78722158 | 78722404 | 78722158 | ID=Msa0893860-mRNA-1:cds;Parent=Msa0893860-mRNA-1 |
| chr6_1 | CDS | 78720116 | 78720699 | 78720116 | ID=Msa0893860-mRNA-1:cds;Parent=Msa0893860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
