Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0427420 | XP_003602637.1 | 99.113 | 789 | 7 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1620 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0427420 | sp|Q8L7V3|PMTQ_ARATH | 64.671 | 835 | 241 | 9 | 1 | 788 | 1 | 828 | 0.0 | 1106 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0427420 | G7JC39 | 99.113 | 789 | 7 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1620 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001800 | Msa0427420 | 0.827636 | 1.402499e-54 | -8.615850e-47 |
Msa0195230 | Msa0427420 | 0.820891 | 5.397409e-53 | -8.615850e-47 |
Msa0195260 | Msa0427420 | 0.821602 | 3.700970e-53 | -8.615850e-47 |
Msa0368640 | Msa0427420 | 0.832072 | 1.164789e-55 | -8.615850e-47 |
Msa0389690 | Msa0427420 | 0.809194 | 2.134962e-50 | -8.615850e-47 |
Msa0427420 | Msa0427480 | 0.998304 | 2.590258e-261 | -8.615850e-47 |
Msa0427420 | Msa0518320 | 0.947765 | 3.551790e-106 | -8.615850e-47 |
Msa0427420 | Msa0523520 | 0.820735 | 5.861575e-53 | -8.615850e-47 |
Msa0427420 | Msa0574900 | 0.808694 | 2.731431e-50 | -8.615850e-47 |
Msa0427420 | Msa0605530 | 0.853404 | 2.443481e-61 | -8.615850e-47 |
Msa0427420 | Msa0606120 | 0.828663 | 7.930456e-55 | -8.615850e-47 |
Msa0427420 | Msa0630440 | 0.812379 | 4.367877e-51 | -8.615850e-47 |
Msa0427420 | Msa0647070 | 0.808022 | 3.798661e-50 | -8.615850e-47 |
Msa0427420 | Msa0713080 | 0.840325 | 9.308405e-58 | -8.615850e-47 |
Msa0427420 | Msa0748740 | 0.817401 | 3.360742e-52 | -8.615850e-47 |
Msa0427420 | Msa0799450 | 0.820360 | 7.148811e-53 | -8.615850e-47 |
Msa0427420 | Msa0827370 | 0.812262 | 4.632807e-51 | -8.615850e-47 |
Msa0427420 | Msa0837710 | 0.816683 | 4.873132e-52 | -8.615850e-47 |
Msa0427420 | Msa0930770 | 0.859761 | 3.307665e-63 | -8.615850e-47 |
Msa0427420 | Msa0968210 | 0.800751 | 1.244021e-48 | -8.615850e-47 |
Msa0427420 | Msa1199850 | 0.815901 | 7.288559e-52 | -8.615850e-47 |
Msa0427420 | Msa1215930 | 0.818696 | 1.712722e-52 | -8.615850e-47 |
Msa0427420 | Msa1339200 | 0.850902 | 1.257590e-60 | -8.615850e-47 |
Msa0427420 | Msa1342760 | 0.804945 | 1.692749e-49 | -8.615850e-47 |
Msa0427420 | Msa1396100 | 0.804869 | 1.756424e-49 | -8.615850e-47 |
Msa0427420 | Msa1404680 | 0.818748 | 1.667337e-52 | -8.615850e-47 |
Msa0427420 | Msa1406090 | 0.811136 | 8.142739e-51 | -8.615850e-47 |
Msa0427420 | Msa1455400 | 0.819540 | 1.100837e-52 | -8.615850e-47 |
Msa0427420 | Msa1462630 | 0.873115 | 1.888146e-67 | -8.615850e-47 |
Msa0427420 | Msa1463590 | 0.815139 | 1.077092e-51 | -8.615850e-47 |
Msa0240540 | Msa0427420 | 0.839293 | 1.728505e-57 | -8.615850e-47 |
Msa0276860 | Msa0427420 | 0.810350 | 1.204354e-50 | -8.615850e-47 |
Msa0279000 | Msa0427420 | 0.845480 | 3.957144e-59 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0427420 | MtrunA17_Chr3g0130381 | 99.113 | 789 | 7 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1620 |
Msa0427420 | MtrunA17_Chr8g0384431 | 71.655 | 822 | 178 | 9 | 1 | 788 | 1 | 801 | 0.0 | 1215 |
Msa0427420 | MtrunA17_Chr3g0125511 | 57.538 | 796 | 288 | 12 | 1 | 788 | 1 | 754 | 0.0 | 946 |
Msa0427420 | MtrunA17_Chr8g0372471 | 55.951 | 731 | 280 | 8 | 76 | 778 | 176 | 892 | 0.0 | 848 |
Msa0427420 | MtrunA17_Chr5g0437501 | 52.757 | 544 | 239 | 4 | 242 | 778 | 75 | 607 | 0.0 | 627 |
Msa0427420 | MtrunA17_Chr3g0113981 | 54.685 | 523 | 222 | 5 | 257 | 779 | 164 | 671 | 0.0 | 609 |
Msa0427420 | MtrunA17_Chr1g0155141 | 50.662 | 529 | 239 | 5 | 252 | 778 | 193 | 701 | 0.0 | 592 |
Msa0427420 | MtrunA17_Chr5g0404771 | 49.742 | 581 | 217 | 10 | 1 | 513 | 1 | 574 | 2.17e-177 | 521 |
Msa0427420 | MtrunA17_Chr1g0159741 | 49.307 | 505 | 238 | 10 | 258 | 755 | 141 | 634 | 1.39e-170 | 507 |
Msa0427420 | MtrunA17_Chr3g0112341 | 47.887 | 497 | 243 | 8 | 268 | 759 | 162 | 647 | 4.95e-168 | 501 |
Msa0427420 | MtrunA17_Chr5g0435751 | 43.219 | 553 | 268 | 12 | 221 | 759 | 79 | 599 | 1.46e-153 | 462 |
Msa0427420 | MtrunA17_Chr1g0167381 | 46.125 | 542 | 252 | 16 | 268 | 787 | 101 | 624 | 8.53e-152 | 457 |
Msa0427420 | MtrunA17_Chr1g0183721 | 46.067 | 534 | 254 | 14 | 268 | 781 | 71 | 590 | 8.44e-150 | 451 |
Msa0427420 | MtrunA17_Chr8g0350351 | 42.830 | 523 | 266 | 12 | 268 | 776 | 97 | 600 | 1.80e-144 | 437 |
Msa0427420 | MtrunA17_Chr1g0187601 | 43.750 | 528 | 265 | 11 | 268 | 776 | 100 | 614 | 4.47e-143 | 435 |
Msa0427420 | MtrunA17_Chr4g0055031 | 44.526 | 548 | 265 | 16 | 248 | 776 | 76 | 603 | 1.51e-142 | 433 |
Msa0427420 | MtrunA17_Chr7g0246681 | 40.917 | 545 | 286 | 12 | 248 | 777 | 65 | 588 | 1.87e-141 | 429 |
Msa0427420 | MtrunA17_Chr5g0404761 | 63.958 | 283 | 98 | 2 | 501 | 783 | 1 | 279 | 4.78e-140 | 414 |
Msa0427420 | MtrunA17_Chr8g0388881 | 42.056 | 535 | 276 | 14 | 261 | 776 | 101 | 620 | 6.39e-138 | 421 |
Msa0427420 | MtrunA17_Chr6g0472571 | 42.561 | 531 | 265 | 16 | 268 | 776 | 114 | 626 | 9.56e-138 | 421 |
Msa0427420 | MtrunA17_Chr5g0409411 | 42.509 | 534 | 268 | 14 | 268 | 781 | 81 | 595 | 1.40e-136 | 417 |
Msa0427420 | MtrunA17_Chr8g0369481 | 41.856 | 528 | 270 | 12 | 268 | 776 | 79 | 588 | 2.17e-136 | 416 |
Msa0427420 | MtrunA17_Chr1g0203741 | 41.696 | 566 | 290 | 18 | 234 | 776 | 69 | 617 | 8.86e-136 | 416 |
Msa0427420 | MtrunA17_Chr7g0214551 | 44.856 | 486 | 244 | 8 | 286 | 756 | 68 | 544 | 9.95e-136 | 414 |
Msa0427420 | MtrunA17_Chr8g0361791 | 42.077 | 549 | 278 | 18 | 247 | 776 | 73 | 600 | 2.29e-132 | 406 |
Msa0427420 | MtrunA17_Chr8g0350391 | 41.002 | 539 | 278 | 16 | 268 | 782 | 114 | 636 | 1.02e-130 | 403 |
Msa0427420 | MtrunA17_Chr7g0246701 | 40.426 | 564 | 292 | 19 | 244 | 782 | 87 | 631 | 2.30e-129 | 399 |
Msa0427420 | MtrunA17_Chr5g0416991 | 42.125 | 527 | 267 | 15 | 268 | 776 | 93 | 599 | 1.38e-128 | 397 |
Msa0427420 | MtrunA17_Chr3g0092501 | 41.760 | 534 | 270 | 16 | 268 | 783 | 94 | 604 | 2.03e-127 | 394 |
Msa0427420 | MtrunA17_Chr1g0171781 | 39.700 | 534 | 272 | 14 | 268 | 776 | 95 | 603 | 7.18e-117 | 366 |
Msa0427420 | MtrunA17_Chr5g0426281 | 33.275 | 571 | 310 | 18 | 247 | 777 | 132 | 671 | 3.21e-91 | 300 |
Msa0427420 | MtrunA17_Chr3g0115931 | 34.286 | 525 | 286 | 17 | 292 | 777 | 185 | 689 | 1.05e-85 | 286 |
Msa0427420 | MtrunA17_Chr4g0043131 | 46.853 | 143 | 70 | 3 | 634 | 770 | 36 | 178 | 9.40e-38 | 139 |
Msa0427420 | MtrunA17_Chr4g0043121 | 30.892 | 314 | 190 | 10 | 268 | 566 | 95 | 396 | 4.93e-37 | 144 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0427420 | AT5G64030.1 | 64.671 | 835 | 241 | 9 | 1 | 788 | 1 | 828 | 0.0 | 1106 |
Msa0427420 | AT1G29470.1 | 64.430 | 790 | 260 | 10 | 1 | 789 | 1 | 770 | 0.0 | 1038 |
Msa0427420 | AT1G29470.2 | 64.430 | 790 | 260 | 10 | 1 | 789 | 1 | 770 | 0.0 | 1038 |
Msa0427420 | AT2G34300.2 | 60.979 | 797 | 276 | 9 | 1 | 789 | 1 | 770 | 0.0 | 1005 |
Msa0427420 | AT2G34300.3 | 60.979 | 797 | 276 | 9 | 1 | 789 | 1 | 770 | 0.0 | 1005 |
Msa0427420 | AT2G34300.1 | 60.979 | 797 | 276 | 9 | 1 | 789 | 1 | 770 | 0.0 | 1005 |
Msa0427420 | AT3G51070.1 | 62.590 | 695 | 239 | 4 | 95 | 782 | 215 | 895 | 0.0 | 942 |
Msa0427420 | AT3G51070.1 | 35.028 | 177 | 89 | 6 | 1 | 155 | 1 | 173 | 3.53e-17 | 87.0 |
Msa0427420 | AT3G51070.2 | 63.317 | 627 | 209 | 4 | 95 | 714 | 215 | 827 | 0.0 | 859 |
Msa0427420 | AT3G51070.2 | 35.028 | 177 | 89 | 6 | 1 | 155 | 1 | 173 | 3.59e-17 | 86.7 |
Msa0427420 | AT2G40280.1 | 50.514 | 584 | 263 | 8 | 203 | 782 | 26 | 587 | 0.0 | 619 |
Msa0427420 | AT3G56080.1 | 53.818 | 537 | 227 | 7 | 243 | 778 | 94 | 610 | 0.0 | 608 |
Msa0427420 | AT1G19430.1 | 41.130 | 761 | 382 | 13 | 21 | 778 | 27 | 724 | 0.0 | 596 |
Msa0427420 | AT1G19430.3 | 41.130 | 761 | 382 | 13 | 21 | 778 | 27 | 724 | 0.0 | 596 |
Msa0427420 | AT3G56080.2 | 55.180 | 473 | 195 | 6 | 243 | 714 | 94 | 550 | 0.0 | 555 |
Msa0427420 | AT1G77260.1 | 44.964 | 556 | 277 | 10 | 217 | 755 | 88 | 631 | 7.37e-172 | 510 |
Msa0427420 | AT5G06050.1 | 45.975 | 559 | 265 | 15 | 224 | 759 | 99 | 643 | 1.49e-171 | 510 |
Msa0427420 | AT2G39750.1 | 48.290 | 497 | 241 | 9 | 268 | 759 | 186 | 671 | 9.88e-170 | 506 |
Msa0427420 | AT4G14360.1 | 45.726 | 503 | 244 | 12 | 268 | 756 | 85 | 572 | 5.56e-147 | 444 |
Msa0427420 | AT4G14360.2 | 45.726 | 503 | 244 | 12 | 268 | 756 | 85 | 572 | 5.56e-147 | 444 |
Msa0427420 | AT3G23300.2 | 44.382 | 534 | 262 | 13 | 268 | 781 | 88 | 606 | 6.58e-147 | 444 |
Msa0427420 | AT3G23300.1 | 44.382 | 534 | 262 | 13 | 268 | 781 | 88 | 606 | 6.58e-147 | 444 |
Msa0427420 | AT4G00740.1 | 41.954 | 522 | 270 | 10 | 270 | 777 | 92 | 594 | 7.45e-144 | 436 |
Msa0427420 | AT4G00740.2 | 41.954 | 522 | 270 | 10 | 270 | 777 | 92 | 594 | 7.45e-144 | 436 |
Msa0427420 | AT1G04430.1 | 45.562 | 507 | 239 | 14 | 268 | 756 | 93 | 580 | 1.33e-143 | 436 |
Msa0427420 | AT1G04430.3 | 45.562 | 507 | 239 | 14 | 268 | 756 | 93 | 580 | 1.33e-143 | 436 |
Msa0427420 | AT1G04430.2 | 45.562 | 507 | 239 | 14 | 268 | 756 | 93 | 580 | 1.33e-143 | 436 |
Msa0427420 | AT1G31850.1 | 42.617 | 535 | 258 | 15 | 268 | 776 | 85 | 596 | 3.51e-141 | 429 |
Msa0427420 | AT1G31850.2 | 42.617 | 535 | 258 | 15 | 268 | 776 | 85 | 596 | 3.51e-141 | 429 |
Msa0427420 | AT1G31850.4 | 42.617 | 535 | 258 | 15 | 268 | 776 | 85 | 596 | 3.51e-141 | 429 |
Msa0427420 | AT1G31850.3 | 42.617 | 535 | 258 | 15 | 268 | 776 | 85 | 596 | 3.51e-141 | 429 |
Msa0427420 | AT4G10440.1 | 41.187 | 556 | 292 | 14 | 241 | 776 | 76 | 616 | 2.35e-140 | 428 |
Msa0427420 | AT1G33170.1 | 41.547 | 556 | 291 | 13 | 241 | 776 | 93 | 634 | 7.07e-140 | 427 |
Msa0427420 | AT4G19120.1 | 42.351 | 536 | 258 | 15 | 268 | 776 | 79 | 590 | 2.68e-138 | 422 |
Msa0427420 | AT4G19120.2 | 42.351 | 536 | 258 | 15 | 268 | 776 | 79 | 590 | 2.68e-138 | 422 |
Msa0427420 | AT5G14430.1 | 45.941 | 505 | 240 | 13 | 268 | 756 | 89 | 576 | 3.86e-136 | 417 |
Msa0427420 | AT1G26850.2 | 42.724 | 536 | 272 | 15 | 268 | 783 | 95 | 615 | 9.21e-136 | 416 |
Msa0427420 | AT1G26850.1 | 42.724 | 536 | 272 | 15 | 268 | 783 | 95 | 615 | 9.21e-136 | 416 |
Msa0427420 | AT1G19430.2 | 36.551 | 632 | 336 | 12 | 21 | 650 | 27 | 595 | 6.36e-134 | 410 |
Msa0427420 | AT5G14430.2 | 45.347 | 505 | 243 | 13 | 268 | 756 | 89 | 576 | 6.91e-134 | 411 |
Msa0427420 | AT2G45750.1 | 41.882 | 542 | 262 | 19 | 271 | 788 | 99 | 611 | 2.35e-132 | 407 |
Msa0427420 | AT4G00750.1 | 41.051 | 514 | 260 | 18 | 290 | 776 | 125 | 622 | 8.97e-127 | 393 |
Msa0427420 | AT2G43200.2 | 42.188 | 512 | 264 | 14 | 268 | 764 | 100 | 594 | 2.43e-126 | 391 |
Msa0427420 | AT2G43200.1 | 42.188 | 512 | 264 | 14 | 268 | 764 | 100 | 594 | 2.43e-126 | 391 |
Msa0427420 | AT4G18030.1 | 41.590 | 541 | 274 | 15 | 257 | 776 | 84 | 603 | 3.55e-126 | 391 |
Msa0427420 | AT5G04060.1 | 41.935 | 527 | 267 | 12 | 268 | 776 | 92 | 597 | 9.48e-126 | 389 |
Msa0427420 | AT3G10200.1 | 41.176 | 527 | 273 | 14 | 268 | 776 | 81 | 588 | 1.22e-123 | 384 |
Msa0427420 | AT3G10200.2 | 41.247 | 497 | 258 | 13 | 268 | 749 | 81 | 558 | 5.96e-117 | 366 |
Msa0427420 | AT4G19120.3 | 42.247 | 445 | 209 | 14 | 268 | 688 | 79 | 499 | 1.23e-107 | 338 |
Msa0427420 | AT1G26850.3 | 41.204 | 432 | 216 | 14 | 268 | 684 | 95 | 503 | 1.04e-92 | 300 |
Msa0427420 | AT1G78240.1 | 31.579 | 570 | 322 | 19 | 247 | 773 | 132 | 676 | 3.84e-84 | 282 |
Msa0427420 | AT1G78240.2 | 31.579 | 570 | 322 | 19 | 247 | 773 | 132 | 676 | 3.84e-84 | 282 |
Msa0427420 | AT1G13860.4 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 8.24e-79 | 266 |
Msa0427420 | AT1G13860.3 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 8.24e-79 | 266 |
Msa0427420 | AT1G13860.1 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 8.24e-79 | 266 |
Msa0427420 | AT1G13860.5 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 8.24e-79 | 266 |
Msa0427420 | AT1G13860.2 | 36.779 | 416 | 218 | 14 | 384 | 773 | 46 | 442 | 3.66e-74 | 248 |
Msa0427420 | AT2G03480.2 | 34.221 | 526 | 294 | 17 | 269 | 773 | 96 | 590 | 1.37e-73 | 251 |
Msa0427420 | AT2G03480.1 | 33.647 | 532 | 300 | 17 | 269 | 773 | 96 | 601 | 5.90e-73 | 250 |
Msa0427420 | AT2G03480.3 | 32.166 | 314 | 184 | 10 | 269 | 566 | 96 | 396 | 1.97e-33 | 134 |
Find 257 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGAAAGATTTGAATATT+TGG | 0.164392 | 3_2:+78097299 | Msa0427420:CDS |
CAGCCGGAACCCAAGTATTT+TGG | 0.216585 | 3_2:-78097811 | None:intergenic |
TGCAGGTGGTAAACTTCTTT+TGG | 0.230174 | 3_2:+78096220 | Msa0427420:intron |
CTTAGCCGCATGTGTTTCTT+TGG | 0.274924 | 3_2:+78092590 | Msa0427420:five_prime_UTR |
CTCATTTGAACTCTGGTCTT+TGG | 0.275650 | 3_2:-78094135 | None:intergenic |
TTTATGCAACTGAATATATA+TGG | 0.276535 | 3_2:+78098097 | Msa0427420:three_prime_UTR |
GGATAGTGGCTTCTTGTATA+TGG | 0.279107 | 3_2:-78096497 | None:intergenic |
AAGACCCCGTTCATAAATAA+TGG | 0.282831 | 3_2:-78097362 | None:intergenic |
CTCTAGCCTTGATTGGGGTT+TGG | 0.283882 | 3_2:+78093598 | Msa0427420:CDS |
CGATCCGAAGACATGGCTTT+AGG | 0.286464 | 3_2:+78093504 | Msa0427420:exon |
TCAGGAAGCTTCTGATAAAT+AGG | 0.293202 | 3_2:-78096293 | None:intergenic |
TAGGCCGCCAGGTGGACTTC+TGG | 0.299464 | 3_2:-78097739 | None:intergenic |
TTCCATATTTCAACATCTTC+AGG | 0.299746 | 3_2:-78096311 | None:intergenic |
TTATCAGCAGCAAAATCTTC+AGG | 0.304087 | 3_2:-78097075 | None:intergenic |
ATCAGCAAGGATCAAGTTAA+TGG | 0.304469 | 3_2:+78096463 | Msa0427420:CDS |
TTTGTTGCTCTAGCCTTGAT+TGG | 0.306385 | 3_2:+78093591 | Msa0427420:CDS |
AAGTTAAGGGGCATCAAAAT+TGG | 0.309838 | 3_2:+78094600 | Msa0427420:CDS |
GACTCTGCCTGACATTGCTT+GGG | 0.309960 | 3_2:+78095559 | Msa0427420:intron |
AGGCAGGTGGGAGGTTCTTC+AGG | 0.312570 | 3_2:-78094401 | None:intergenic |
GGGAAATATTCTAGAGTAGA+TGG | 0.314502 | 3_2:+78093525 | Msa0427420:CDS |
TGAGCTTCATGTTCATCCTT+TGG | 0.318842 | 3_2:-78095677 | None:intergenic |
TTATCCCATGCCTTGACAAC+TGG | 0.320818 | 3_2:+78094321 | Msa0427420:CDS |
TTTGAAAGATTTGAATATTT+GGG | 0.321547 | 3_2:+78097300 | Msa0427420:CDS |
CACTAAGCTTGCTGAAGTTA+AGG | 0.329223 | 3_2:+78094586 | Msa0427420:CDS |
TTCTCGATGTTCATAGTGTT+TGG | 0.341847 | 3_2:-78094369 | None:intergenic |
TTCCTGAAGATGTTGAAATA+TGG | 0.348064 | 3_2:+78096309 | Msa0427420:CDS |
CCTTCCCATTATTTATGAAC+GGG | 0.357509 | 3_2:+78097357 | Msa0427420:CDS |
TCAAATGAGGTATTCCCTTC+CGG | 0.367877 | 3_2:+78094149 | Msa0427420:CDS |
TGGGAACTTGACAACCAATA+TGG | 0.368562 | 3_2:-78097027 | None:intergenic |
CTTTATTTATATTTAGAGAT+TGG | 0.369394 | 3_2:+78097935 | Msa0427420:three_prime_UTR |
CAAATGAGGTATTCCCTTCC+GGG | 0.376544 | 3_2:+78094150 | Msa0427420:CDS |
ATGGATATGAACTCAATCTA+TGG | 0.377899 | 3_2:+78097174 | Msa0427420:CDS |
AATGAAACTACGACACAAAC+TGG | 0.384495 | 3_2:+78094191 | Msa0427420:CDS |
CTTCTATAATATGGTGCCAT+AGG | 0.385741 | 3_2:+78097964 | Msa0427420:three_prime_UTR |
AGTTCCCAAGTTGGAGTCTA+TGG | 0.386840 | 3_2:+78097042 | Msa0427420:CDS |
TTGTTGCTCTAGCCTTGATT+GGG | 0.386986 | 3_2:+78093592 | Msa0427420:CDS |
ATAGAGCGCTTATATCCTTC+AGG | 0.387610 | 3_2:-78094434 | None:intergenic |
AGACTCTGCCTGACATTGCT+TGG | 0.390574 | 3_2:+78095558 | Msa0427420:intron |
GATCCGAAGACATGGCTTTA+GGG | 0.392712 | 3_2:+78093505 | Msa0427420:exon |
CCGCGTTCACTTGAACTAAC+TGG | 0.395097 | 3_2:-78096961 | None:intergenic |
CAATCTCTAAATATAAATAA+AGG | 0.395280 | 3_2:-78097934 | None:intergenic |
TTTGACAGTGTGTGAATGTT+GGG | 0.397887 | 3_2:-78092856 | None:intergenic |
GGATGAGATGCCAAAATACT+TGG | 0.398733 | 3_2:+78097801 | Msa0427420:three_prime_UTR |
TCAAAATTGGGTGAAAGTTA+CGG | 0.401724 | 3_2:+78094613 | Msa0427420:CDS |
CCTCCAAGACTGGGTACAAT+TGG | 0.405008 | 3_2:+78094267 | Msa0427420:CDS |
ACAAAGAGGCTTCCCTTCCC+TGG | 0.407202 | 3_2:+78095752 | Msa0427420:CDS |
CAAAATTGGGTGAAAGTTAC+GGG | 0.407429 | 3_2:+78094614 | Msa0427420:CDS |
CTCTGTCTCCTTAGGCCGCC+AGG | 0.410259 | 3_2:-78097750 | None:intergenic |
GAAGTGCCCCATGCTTGAAT+TGG | 0.410323 | 3_2:-78094667 | None:intergenic |
AGTACTACTAATTGTGACTT+TGG | 0.411639 | 3_2:+78092777 | Msa0427420:five_prime_UTR |
ATTCAAGAGTCCTCCAAGAC+TGG | 0.418254 | 3_2:+78094257 | Msa0427420:CDS |
ATGCCAAAATACTTGGGTTC+CGG | 0.419246 | 3_2:+78097808 | Msa0427420:three_prime_UTR |
CAAGTCTTATCTAAACGGAT+TGG | 0.419452 | 3_2:+78097122 | Msa0427420:CDS |
CCTGCTATATCTGCTGTAAT+GGG | 0.421591 | 3_2:+78095728 | Msa0427420:CDS |
TCCTGCTATATCTGCTGTAA+TGG | 0.421692 | 3_2:+78095727 | Msa0427420:CDS |
GGAGGAGAGGGAGTGACTTA+AGG | 0.422154 | 3_2:-78092660 | None:intergenic |
CATTAACAAAATCAATATGC+TGG | 0.424608 | 3_2:+78096428 | Msa0427420:CDS |
GGTACATTGGTCAGCCTGGC+TGG | 0.424736 | 3_2:-78097006 | None:intergenic |
GAGATTCGAAATTGAGAGAA+AGG | 0.427817 | 3_2:-78092881 | None:intergenic |
GGCTGACCAATGTACCATAT+TGG | 0.427892 | 3_2:+78097013 | Msa0427420:CDS |
AGACCCCGTTCATAAATAAT+GGG | 0.428891 | 3_2:-78097361 | None:intergenic |
CAGATGCAATCTAGCTTCTC+TGG | 0.430244 | 3_2:+78097565 | Msa0427420:intron |
ACTAAGCTTGCTGAAGTTAA+GGG | 0.433369 | 3_2:+78094587 | Msa0427420:CDS |
TTGACAACTGGAAAGCGATT+AGG | 0.436526 | 3_2:+78094333 | Msa0427420:CDS |
TTTCCAATTGTACCCAGTCT+TGG | 0.437033 | 3_2:-78094270 | None:intergenic |
TAATTGAGTAGTTATTGATC+AGG | 0.441245 | 3_2:+78093459 | Msa0427420:intron |
TCATAACAATCATTGGATAG+TGG | 0.441820 | 3_2:-78096511 | None:intergenic |
TCGTTGCTCATAACAATCAT+TGG | 0.446283 | 3_2:-78096518 | None:intergenic |
CTGAGGTTGATCGGATTCTC+AGG | 0.448079 | 3_2:+78097591 | Msa0427420:CDS |
GGCCAGAAAAGTGGCCAGCC+AGG | 0.448570 | 3_2:+78096992 | Msa0427420:CDS |
GTGTCCAAGTCTTATCTAAA+CGG | 0.458820 | 3_2:+78097117 | Msa0427420:CDS |
TCAAGGCATGGGATAAAGTC+GGG | 0.458938 | 3_2:-78094314 | None:intergenic |
CAATCCGTTTAGATAAGACT+TGG | 0.459235 | 3_2:-78097121 | None:intergenic |
AACTAAACTCTCTCTTCCTT+CGG | 0.459892 | 3_2:+78092817 | Msa0427420:five_prime_UTR |
GAAGGAATACCATGCTGCAT+TGG | 0.460905 | 3_2:-78096581 | None:intergenic |
CTCTGGTAGCTGAGGTTGAT+CGG | 0.463097 | 3_2:+78097582 | Msa0427420:CDS |
AAGGAATACCATGCTGCATT+GGG | 0.465896 | 3_2:-78096580 | None:intergenic |
AGGTTCAATTTGCTCTTGAG+AGG | 0.466968 | 3_2:+78095699 | Msa0427420:CDS |
AAGTCTTATCTAAACGGATT+GGG | 0.468240 | 3_2:+78097123 | Msa0427420:CDS |
CGTTTGCCCCAAGCAATGTC+AGG | 0.469178 | 3_2:-78095566 | None:intergenic |
CCAATTGTACCCAGTCTTGG+AGG | 0.469573 | 3_2:-78094267 | None:intergenic |
TTGAGTGTCTCTGTCTCCTT+AGG | 0.471291 | 3_2:-78097758 | None:intergenic |
AAAGAGAAAGCCTCCGAAGC+TGG | 0.471336 | 3_2:-78095624 | None:intergenic |
TGAAAAGAAAGATGAATCAG+AGG | 0.472280 | 3_2:+78093965 | Msa0427420:CDS |
CAGCGAAGAGGCGTCTACTA+AGG | 0.476422 | 3_2:+78093923 | Msa0427420:CDS |
CGGACAATAAGCTTTCCTTC+AGG | 0.478801 | 3_2:-78097614 | None:intergenic |
TTTCCCTAAAGCCATGTCTT+CGG | 0.479516 | 3_2:-78093508 | None:intergenic |
TAGTTAAGGGCCGGAGGAGA+GGG | 0.480840 | 3_2:-78092672 | None:intergenic |
GGATGTGGAGTTGCCAGCTT+CGG | 0.480928 | 3_2:+78095611 | Msa0427420:CDS |
AGTTAAGGGGCATCAAAATT+GGG | 0.484810 | 3_2:+78094601 | Msa0427420:CDS |
GGAAAGCGATTAGGAGTCTT+CGG | 0.484828 | 3_2:+78094342 | Msa0427420:CDS |
CCCTTCCCATTATTTATGAA+CGG | 0.488962 | 3_2:+78097356 | Msa0427420:CDS |
ATCAGATTTCCCTCACCCTA+TGG | 0.494214 | 3_2:-78097980 | None:intergenic |
CAAAGAAACACATGCGGCTA+AGG | 0.495484 | 3_2:-78092589 | None:intergenic |
GCAACTGAATATATATGGAT+TGG | 0.496597 | 3_2:+78098102 | Msa0427420:three_prime_UTR |
GAGGGAGTGACTTAAGGAAG+AGG | 0.496847 | 3_2:-78092654 | None:intergenic |
GTTTGACAGTGTGTGAATGT+TGG | 0.496984 | 3_2:-78092857 | None:intergenic |
CTGAAGGAAAGCTTATTGTC+CGG | 0.497261 | 3_2:+78097615 | Msa0427420:CDS |
TAACAAACCCTCCTTATCCT+TGG | 0.499118 | 3_2:-78097711 | None:intergenic |
AGAGTTCCATGGCACATTGA+AGG | 0.500328 | 3_2:+78095809 | Msa0427420:CDS |
CTGAATATATATGGATTGGA+CGG | 0.501522 | 3_2:+78098106 | Msa0427420:three_prime_UTR |
GCAAAATGAGGACGTGCCTC+AGG | 0.502310 | 3_2:+78093650 | Msa0427420:CDS |
ATCAAATACTCTCCCAGGGA+AGG | 0.510333 | 3_2:-78095765 | None:intergenic |
CATGACCTACTCCAAGGATA+AGG | 0.511195 | 3_2:+78097700 | Msa0427420:CDS |
GAAGTCCACCTGGCGGCCTA+AGG | 0.514851 | 3_2:+78097742 | Msa0427420:CDS |
TTCTATAATATGGTGCCATA+GGG | 0.515066 | 3_2:+78097965 | Msa0427420:three_prime_UTR |
AAGTGCCCCATGCTTGAATT+GGG | 0.517462 | 3_2:-78094666 | None:intergenic |
TTGAATTGGGTTCCACCACC+AGG | 0.519299 | 3_2:-78094653 | None:intergenic |
AGCAGAGTCAAAGAATGAAA+AGG | 0.519819 | 3_2:+78094232 | Msa0427420:CDS |
GCTTTCCAGTTGTCAAGGCA+TGG | 0.520419 | 3_2:-78094326 | None:intergenic |
TAATATGGTGCCATAGGGTG+AGG | 0.521259 | 3_2:+78097970 | Msa0427420:three_prime_UTR |
AGATAGTAATGTAGAGGAGA+AGG | 0.521421 | 3_2:+78094049 | Msa0427420:CDS |
AAAGGATGAACATGAAGCTC+AGG | 0.523572 | 3_2:+78095679 | Msa0427420:CDS |
AAAGTTTGTAATGTTACTGC+TGG | 0.523799 | 3_2:+78094290 | Msa0427420:CDS |
TGCAATGTCACTTGCACCAA+AGG | 0.524307 | 3_2:+78095661 | Msa0427420:CDS |
TATCAGCAGCAAAATCTTCA+GGG | 0.525199 | 3_2:-78097074 | None:intergenic |
ATGGAGGAGATCATACGTCC+TGG | 0.525368 | 3_2:-78097428 | None:intergenic |
TTCAATTTGCTCTTGAGAGG+GGG | 0.525841 | 3_2:+78095702 | Msa0427420:CDS |
GTGGAACCCAATTCAAGCAT+GGG | 0.531941 | 3_2:+78094660 | Msa0427420:CDS |
GGTTCAATTTGCTCTTGAGA+GGG | 0.532634 | 3_2:+78095700 | Msa0427420:CDS |
TGCCTTGTCTCTCTTCCTGA+AGG | 0.535020 | 3_2:+78094419 | Msa0427420:CDS |
AAGGATCAAGTTAATGGAGT+TGG | 0.537672 | 3_2:+78096469 | Msa0427420:CDS |
GCAGCAAAATCTTCAGGGGC+CGG | 0.538266 | 3_2:-78097069 | None:intergenic |
CAAAGAGGCTTCCCTTCCCT+GGG | 0.538740 | 3_2:+78095753 | Msa0427420:CDS |
TTAAGTCACTCCCTCTCCTC+CGG | 0.539629 | 3_2:+78092662 | Msa0427420:five_prime_UTR |
CATCATCCAAACCCCAATCA+AGG | 0.540492 | 3_2:-78093604 | None:intergenic |
ACTGCATCAAATACTCTCCC+AGG | 0.541601 | 3_2:-78095770 | None:intergenic |
CGGCAGTTTGAAGATAATCC+TGG | 0.544215 | 3_2:+78093744 | Msa0427420:CDS |
CATTAACGAGCTTGAGAGCA+TGG | 0.545161 | 3_2:+78097652 | Msa0427420:CDS |
AATGTCTCCCTCAGTCCTCA+TGG | 0.546910 | 3_2:+78092628 | Msa0427420:five_prime_UTR |
ATATGGTACATTGGTCAGCC+TGG | 0.547368 | 3_2:-78097010 | None:intergenic |
ATATAAAATAAATAAATCAA+TGG | 0.548632 | 3_2:-78098025 | None:intergenic |
TGAAGGAAAGCTTATTGTCC+GGG | 0.549044 | 3_2:+78097616 | Msa0427420:CDS |
TTACATTGACTTTATACAAG+AGG | 0.550306 | 3_2:+78094691 | Msa0427420:CDS |
AAATGATATATGACTAGTAG+TGG | 0.551153 | 3_2:-78097860 | None:intergenic |
ATTAACAAAATCAATATGCT+GGG | 0.551786 | 3_2:+78096429 | Msa0427420:CDS |
TGTAGTTCCCGTGCAAAATG+AGG | 0.552860 | 3_2:+78093638 | Msa0427420:CDS |
GAGATCATACGTCCTGGGAT+AGG | 0.553125 | 3_2:-78097422 | None:intergenic |
TTGCCTGAGGATGCGACCAA+GGG | 0.553259 | 3_2:+78093771 | Msa0427420:CDS |
TGGTTGTCAAGTTCCCAAGT+TGG | 0.553335 | 3_2:+78097033 | Msa0427420:CDS |
GGAATACCTCATTTGAACTC+TGG | 0.553898 | 3_2:-78094142 | None:intergenic |
TAGCAAGAAGCAGATCTAAG+AGG | 0.553942 | 3_2:-78092950 | None:intergenic |
CTTTCCAGTTGTCAAGGCAT+GGG | 0.554013 | 3_2:-78094325 | None:intergenic |
GGTCACAGTGGCCAGAAAAG+TGG | 0.554071 | 3_2:+78096983 | Msa0427420:CDS |
TGAATATATATGGATTGGAC+GGG | 0.554603 | 3_2:+78098107 | Msa0427420:three_prime_UTR |
TGTGGAGTTGCCAGCTTCGG+AGG | 0.557116 | 3_2:+78095614 | Msa0427420:CDS |
CCCATTACAGCAGATATAGC+AGG | 0.558260 | 3_2:-78095728 | None:intergenic |
CAGATCTAAGAGGAAGATGA+AGG | 0.561247 | 3_2:-78092940 | None:intergenic |
GGTAAGAAAACAGAAGATGA+AGG | 0.565006 | 3_2:+78093876 | Msa0427420:CDS |
GAATTCAGTGGTCAAATGTA+CGG | 0.565252 | 3_2:+78097145 | Msa0427420:CDS |
CCCGTTCATAAATAATGGGA+AGG | 0.566248 | 3_2:-78097357 | None:intergenic |
AGCTCAGACTGAGCCCCGGA+AGG | 0.566755 | 3_2:-78094164 | None:intergenic |
GTCAAGGCATGGGATAAAGT+CGG | 0.567476 | 3_2:-78094315 | None:intergenic |
AATATTCTAGAGTAGATGGT+AGG | 0.569169 | 3_2:+78093529 | Msa0427420:CDS |
GATCGGATTCTCAGGCCTGA+AGG | 0.569364 | 3_2:+78097599 | Msa0427420:CDS |
CTGAACAGAGTATTGCGGCC+TGG | 0.570629 | 3_2:+78096245 | Msa0427420:CDS |
AGTTGGAGTCTATGGTAAGC+CGG | 0.573432 | 3_2:+78097050 | Msa0427420:CDS |
GGTGGAACCCAATTCAAGCA+TGG | 0.579009 | 3_2:+78094659 | Msa0427420:CDS |
ATAGTTAAGGGCCGGAGGAG+AGG | 0.579248 | 3_2:-78092673 | None:intergenic |
TCTAGCTTCTCTGGTAGCTG+AGG | 0.579746 | 3_2:+78097574 | Msa0427420:CDS |
TAATCGCTTTCCAGTTGTCA+AGG | 0.579902 | 3_2:-78094331 | None:intergenic |
TAGTAATGTAGAGGAGAAGG+TGG | 0.580767 | 3_2:+78094052 | Msa0427420:CDS |
CATGCGAACCTCCCACTGCA+TGG | 0.581028 | 3_2:-78097681 | None:intergenic |
TCAAATACTCTCCCAGGGAA+GGG | 0.581519 | 3_2:-78095764 | None:intergenic |
GCATCCTCAGGCAAATCACC+AGG | 0.581534 | 3_2:-78093762 | None:intergenic |
AGGAAGAGAGACAAGGCAGG+TGG | 0.585497 | 3_2:-78094414 | None:intergenic |
TGAATACCTTCAATGTGCCA+TGG | 0.585774 | 3_2:-78095815 | None:intergenic |
TATTGTCCGGGACACTGTTG+AGG | 0.586039 | 3_2:+78097628 | Msa0427420:CDS |
GTGAGGTCGATCCGAAGACA+TGG | 0.587047 | 3_2:+78093497 | Msa0427420:exon |
CTTCCCATTATTTATGAACG+GGG | 0.587916 | 3_2:+78097358 | Msa0427420:CDS |
CTTACCATAGACTCCAACTT+GGG | 0.588345 | 3_2:-78097046 | None:intergenic |
TGACAACCAATATGGTACAT+TGG | 0.589602 | 3_2:-78097019 | None:intergenic |
CAAAGACCAGAGTTCAAATG+AGG | 0.590021 | 3_2:+78094136 | Msa0427420:CDS |
GTTATACTAGATGTTGGATG+TGG | 0.591044 | 3_2:+78095596 | Msa0427420:CDS |
GACCTACTCCAAGGATAAGG+AGG | 0.591238 | 3_2:+78097703 | Msa0427420:CDS |
TTCAAGAGTCCTCCAAGACT+GGG | 0.592523 | 3_2:+78094258 | Msa0427420:CDS |
GATATGAACTCAATCTATGG+AGG | 0.592603 | 3_2:+78097177 | Msa0427420:CDS |
GCTCAGACTGAGCCCCGGAA+GGG | 0.594249 | 3_2:-78094163 | None:intergenic |
AGAGGAAACCATGAGGACTG+AGG | 0.594667 | 3_2:-78092636 | None:intergenic |
TGGAGGAGATCATACGTCCT+GGG | 0.597705 | 3_2:-78097427 | None:intergenic |
TTGCTGCTGATAATAAACAC+TGG | 0.598168 | 3_2:+78097085 | Msa0427420:CDS |
GTCAAATGTACGGAATGTCA+TGG | 0.602207 | 3_2:+78097155 | Msa0427420:CDS |
GTGCACGTTGTAGAGTTCCA+TGG | 0.602530 | 3_2:+78095798 | Msa0427420:CDS |
CTAAGCTTGCTGAAGTTAAG+GGG | 0.603146 | 3_2:+78094588 | Msa0427420:CDS |
GGAAGAGAGACAAGGCAGGT+GGG | 0.603261 | 3_2:-78094413 | None:intergenic |
TAATGACCTCAACAGTGTCC+CGG | 0.603316 | 3_2:-78097634 | None:intergenic |
TGTCAGCTCCGAAGAGAAGT+CGG | 0.604687 | 3_2:+78093803 | Msa0427420:CDS |
GCTTACCATAGACTCCAACT+TGG | 0.604957 | 3_2:-78097047 | None:intergenic |
GAAGGAACAGACTGAGGTGA+GGG | 0.605363 | 3_2:+78093689 | Msa0427420:CDS |
GAGGAAACCATGAGGACTGA+GGG | 0.605447 | 3_2:-78092635 | None:intergenic |
ATTCTGATTTAAATAGCCGA+AGG | 0.605888 | 3_2:-78092833 | None:intergenic |
GATATAAGCGCTCTATTGAG+TGG | 0.606444 | 3_2:+78094441 | Msa0427420:CDS |
TTTGCCTGAGGATGCGACCA+AGG | 0.606923 | 3_2:+78093770 | Msa0427420:CDS |
GTTCAATTTGCTCTTGAGAG+GGG | 0.608000 | 3_2:+78095701 | Msa0427420:CDS |
AGTATGCTATTGTTTAAGCA+CGG | 0.608753 | 3_2:+78097780 | Msa0427420:exon |
TTCAGGAAGAGAGACAAGGC+AGG | 0.609303 | 3_2:-78094417 | None:intergenic |
GGAACTTGTTTCAATCAGCA+AGG | 0.612001 | 3_2:+78096450 | Msa0427420:CDS |
TGGAGCTGAACAGAGTATTG+CGG | 0.613676 | 3_2:+78096240 | Msa0427420:CDS |
AACAACAGATAGTAATGTAG+AGG | 0.614483 | 3_2:+78094043 | Msa0427420:CDS |
AATCATTTAGCACCTATCCC+AGG | 0.615139 | 3_2:+78097410 | Msa0427420:CDS |
AAATGAGGTATTCCCTTCCG+GGG | 0.618479 | 3_2:+78094151 | Msa0427420:CDS |
AATATGGTGCCATAGGGTGA+GGG | 0.618599 | 3_2:+78097971 | Msa0427420:three_prime_UTR |
CCAGTTAGTTCAAGTGAACG+CGG | 0.619426 | 3_2:+78096961 | Msa0427420:CDS |
TGAAGGAACAGACTGAGGTG+AGG | 0.620122 | 3_2:+78093688 | Msa0427420:CDS |
TGTTGCTCTAGCCTTGATTG+GGG | 0.623280 | 3_2:+78093593 | Msa0427420:CDS |
GTGGCCTAAAAGCAGAGAGA+AGG | 0.623669 | 3_2:+78094460 | Msa0427420:CDS |
ACACGTGTTATACTAGATGT+TGG | 0.623731 | 3_2:+78095590 | Msa0427420:CDS |
CATGGTAAAGTCCATGCAGT+GGG | 0.624917 | 3_2:+78097670 | Msa0427420:CDS |
GAACTCTACAACGTGCACAA+TGG | 0.628195 | 3_2:-78095793 | None:intergenic |
TTGAAAAGAGATGATCTGCA+TGG | 0.628694 | 3_2:-78097447 | None:intergenic |
TAGAAGCTCAGACTGAGCCC+CGG | 0.630651 | 3_2:-78094168 | None:intergenic |
ACTTCAGCAAGCTTAGTGTG+TGG | 0.630986 | 3_2:-78094581 | None:intergenic |
ATATCAAAATTAATGACCAA+AGG | 0.631627 | 3_2:-78097911 | None:intergenic |
CTGCTGTAATGGGCACAAAG+AGG | 0.637182 | 3_2:+78095738 | Msa0427420:CDS |
CTGCATCAAATACTCTCCCA+GGG | 0.637623 | 3_2:-78095769 | None:intergenic |
GAAGTCGGAGGAAAATTCCA+CGG | 0.637764 | 3_2:+78093818 | Msa0427420:CDS |
GATGAGATGCCAAAATACTT+GGG | 0.638807 | 3_2:+78097802 | Msa0427420:three_prime_UTR |
ACTCTGCCTGACATTGCTTG+GGG | 0.639154 | 3_2:+78095560 | Msa0427420:CDS |
GAAGATGTTGAAATATGGAA+TGG | 0.639298 | 3_2:+78096314 | Msa0427420:CDS |
CCGTTCATAAATAATGGGAA+GGG | 0.642519 | 3_2:-78097356 | None:intergenic |
GCTTCTTGCTATAGAACCAG+AGG | 0.645455 | 3_2:+78092962 | Msa0427420:five_prime_UTR |
CTGATGATCCCAATGCAGCA+TGG | 0.648087 | 3_2:+78096572 | Msa0427420:CDS |
AAACTGATAATAGCAATGCT+CGG | 0.648882 | 3_2:+78093724 | Msa0427420:CDS |
ATATGAACTCAATCTATGGA+GGG | 0.649955 | 3_2:+78097178 | Msa0427420:CDS |
GGTTCGCATGACCTACTCCA+AGG | 0.652153 | 3_2:+78097694 | Msa0427420:CDS |
CAAGTGAACGCGGGTCACAG+TGG | 0.652261 | 3_2:+78096971 | Msa0427420:CDS |
ACCTACTCCAAGGATAAGGA+GGG | 0.652538 | 3_2:+78097704 | Msa0427420:CDS |
AGAGAGACAAGGCAGGTGGG+AGG | 0.652823 | 3_2:-78094410 | None:intergenic |
TATGTGTCCAGAAGTCCACC+TGG | 0.655480 | 3_2:+78097732 | Msa0427420:CDS |
AAAGAATCTGATGAAAACGC+TGG | 0.656465 | 3_2:+78094089 | Msa0427420:CDS |
AACAGAGTATTGCGGCCTGG+TGG | 0.656543 | 3_2:+78096248 | Msa0427420:CDS |
GGTAAAGTCCATGCAGTGGG+AGG | 0.657793 | 3_2:+78097673 | Msa0427420:CDS |
GCATGGTAAAGTCCATGCAG+TGG | 0.661920 | 3_2:+78097669 | Msa0427420:CDS |
TAAACGGATTGGGAATTCAG+TGG | 0.664896 | 3_2:+78097133 | Msa0427420:CDS |
ACCCTCCTTATCCTTGGAGT+AGG | 0.669418 | 3_2:-78097705 | None:intergenic |
CAAGGCATGGGATAAAGTCG+GGG | 0.669765 | 3_2:-78094313 | None:intergenic |
CAGTTAGTTCAAGTGAACGC+GGG | 0.672917 | 3_2:+78096962 | Msa0427420:CDS |
ATCAGCAGCAAAATCTTCAG+GGG | 0.674815 | 3_2:-78097073 | None:intergenic |
ATCCTTCAGGAAGAGAGACA+AGG | 0.675474 | 3_2:-78094421 | None:intergenic |
AATAATGGGAAGGGTATCTG+CGG | 0.678257 | 3_2:-78097347 | None:intergenic |
AAATAACAAAGACAGCGAAG+AGG | 0.679636 | 3_2:+78093911 | Msa0427420:CDS |
TGCCTGAGGATGCGACCAAG+GGG | 0.680547 | 3_2:+78093772 | Msa0427420:CDS |
TGGAACCCAATTCAAGCATG+GGG | 0.686380 | 3_2:+78094661 | Msa0427420:CDS |
GGTATAATTAATCATCTGTG+AGG | 0.690025 | 3_2:+78093480 | Msa0427420:five_prime_UTR |
TGAGGTGAAGGAACAGACTG+AGG | 0.690937 | 3_2:+78093683 | Msa0427420:CDS |
TGTCTCCTTAGGCCGCCAGG+TGG | 0.691172 | 3_2:-78097747 | None:intergenic |
AGATACGAAGACAGAAGACG+AGG | 0.694255 | 3_2:+78093854 | Msa0427420:CDS |
AAAAGAGATGATCTGCATGG+AGG | 0.700577 | 3_2:-78097444 | None:intergenic |
ATCTGAGCATTGTGTGAACG+CGG | 0.707613 | 3_2:-78092913 | None:intergenic |
ATCTTCAGAAGACTTCTCCG+TGG | 0.710231 | 3_2:-78093835 | None:intergenic |
GATACGAAGACAGAAGACGA+GGG | 0.710853 | 3_2:+78093855 | Msa0427420:CDS |
GTGTCCAGAAGTCCACCTGG+CGG | 0.714703 | 3_2:+78097735 | Msa0427420:CDS |
ACTAACCAAAGAAACACATG+CGG | 0.719248 | 3_2:-78092595 | None:intergenic |
CAGCTCCGAAGAGAAGTCGG+AGG | 0.726526 | 3_2:+78093806 | Msa0427420:CDS |
TAATCCTGGTGATTTGCCTG+AGG | 0.728544 | 3_2:+78093758 | Msa0427420:CDS |
GCCTGAGGATGCGACCAAGG+GGG | 0.732614 | 3_2:+78093773 | Msa0427420:CDS |
TTAAGGAAGAGGAAACCATG+AGG | 0.751869 | 3_2:-78092643 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTACTAAAAAATAGTTAA+GGG | - | chr3_2:78092688-78092707 | None:intergenic | 10.0% |
!! | AAATTACTAAAAAATAGTTA+AGG | - | chr3_2:78092689-78092708 | None:intergenic | 10.0% |
!!! | ATTTTTTCTTTTTCTTAAAA+GGG | - | chr3_2:78094863-78094882 | None:intergenic | 10.0% |
!!! | TATTTTTAACTTATTTTCGT+CGG | + | chr3_2:78092724-78092743 | Msa0427420:five_prime_UTR | 15.0% |
!!! | GATTTTTTCTTTTTCTTAAA+AGG | - | chr3_2:78094864-78094883 | None:intergenic | 15.0% |
!!! | CAATATTAACAGATTTTTAA+AGG | - | chr3_2:78094902-78094921 | None:intergenic | 15.0% |
!!! | CTTTAAAAATCTGTTAATAT+TGG | + | chr3_2:78094900-78094919 | Msa0427420:intron | 15.0% |
!! | TAGAAATCTAAAAAAAGTTT+AGG | - | chr3_2:78095470-78095489 | None:intergenic | 15.0% |
!!! | ATTTTGAATCATATTCATTT+AGG | + | chr3_2:78095885-78095904 | Msa0427420:intron | 15.0% |
!! | TGTTTAAATACATGTAAATA+AGG | - | chr3_2:78096185-78096204 | None:intergenic | 15.0% |
!!! | CAAAATCTAAATTTCTATTT+TGG | - | chr3_2:78096628-78096647 | None:intergenic | 15.0% |
!! | AACAAGTATAAAAATAAAAC+AGG | + | chr3_2:78096770-78096789 | Msa0427420:intron | 15.0% |
!! | ACAAGTATAAAAATAAAACA+GGG | + | chr3_2:78096771-78096790 | Msa0427420:intron | 15.0% |
!! | TTTGAAAGATTTGAATATTT+GGG | + | chr3_2:78097300-78097319 | Msa0427420:CDS | 15.0% |
!! | CAATCTCTAAATATAAATAA+AGG | - | chr3_2:78097937-78097956 | None:intergenic | 15.0% |
!!! | CTTTATTTATATTTAGAGAT+TGG | + | chr3_2:78097935-78097954 | Msa0427420:three_prime_UTR | 15.0% |
!!! | AGGAGAAATAACATAATTTT+AGG | - | chr3_2:78094539-78094558 | None:intergenic | 20.0% |
!!! | CATTTTGTTTGGATTAAATT+TGG | + | chr3_2:78094718-78094737 | Msa0427420:intron | 20.0% |
!!! | ACAAGTTAAACAGAAATTTT+TGG | - | chr3_2:78094775-78094794 | None:intergenic | 20.0% |
!! | ATATATTGATCTTGAAAGTT+CGG | - | chr3_2:78094805-78094824 | None:intergenic | 20.0% |
!! | TATCATAATAAAGAGAAACT+TGG | - | chr3_2:78095020-78095039 | None:intergenic | 20.0% |
!! | TACATTAAAATGCACAAAAA+AGG | - | chr3_2:78096363-78096382 | None:intergenic | 20.0% |
!!! | TTTTTTGTGCATTTTAATGT+AGG | + | chr3_2:78096362-78096381 | Msa0427420:intron | 20.0% |
!! | ATTAACAAAATCAATATGCT+GGG | + | chr3_2:78096429-78096448 | Msa0427420:CDS | 20.0% |
!!! | CTTTGAAAGATTTGAATATT+TGG | + | chr3_2:78097299-78097318 | Msa0427420:CDS | 20.0% |
!!! | TTTTTGGTATATATCATGAT+TGG | + | chr3_2:78097383-78097402 | Msa0427420:CDS | 20.0% |
!!! | AGTCATATATCATTTTAGTT+AGG | + | chr3_2:78097868-78097887 | Msa0427420:three_prime_UTR | 20.0% |
!! | ATATCAAAATTAATGACCAA+AGG | - | chr3_2:78097914-78097933 | None:intergenic | 20.0% |
!!! | TATTTTATATGCGTAATAGT+CGG | + | chr3_2:78098038-78098057 | Msa0427420:three_prime_UTR | 20.0% |
!! | TTTATGCAACTGAATATATA+TGG | + | chr3_2:78098097-78098116 | Msa0427420:three_prime_UTR | 20.0% |
! | AATAAAATCGAACTAAGATG+CGG | - | chr3_2:78093162-78093181 | None:intergenic | 25.0% |
!! | AACGGTAAAAGTATAAGATA+TGG | - | chr3_2:78093311-78093330 | None:intergenic | 25.0% |
! | GTAAAGTTGAATCAGTAAAA+CGG | - | chr3_2:78093329-78093348 | None:intergenic | 25.0% |
! | TAAGACTTGAAACACAAATT+AGG | - | chr3_2:78093437-78093456 | None:intergenic | 25.0% |
! | TAATTGAGTAGTTATTGATC+AGG | + | chr3_2:78093459-78093478 | Msa0427420:intron | 25.0% |
!!! | GTCTTTGTTATTTTCTGTAT+TGG | - | chr3_2:78093904-78093923 | None:intergenic | 25.0% |
!!! | TTACATTGACTTTATACAAG+AGG | + | chr3_2:78094691-78094710 | Msa0427420:CDS | 25.0% |
! | TTTCTCTTTATTATGATACC+TGG | + | chr3_2:78095022-78095041 | Msa0427420:intron | 25.0% |
!! | ATCAATATCATGGTAAGTTT+TGG | - | chr3_2:78095372-78095391 | None:intergenic | 25.0% |
! | ATGAAGGTAAATCAATATCA+TGG | - | chr3_2:78095382-78095401 | None:intergenic | 25.0% |
! | TGTAGAAGATCATTTAATGA+AGG | - | chr3_2:78095398-78095417 | None:intergenic | 25.0% |
! | ATAATACATGTAAATGTCAC+TGG | + | chr3_2:78095956-78095975 | Msa0427420:intron | 25.0% |
!!! | TGTTTGTTATACAGCTATTT+TGG | + | chr3_2:78095983-78096002 | Msa0427420:intron | 25.0% |
! | AATCATGTTAACTAGGATAT+TGG | - | chr3_2:78096148-78096167 | None:intergenic | 25.0% |
! | ATCTAGTAATCATGTTAACT+AGG | - | chr3_2:78096155-78096174 | None:intergenic | 25.0% |
! | CATTAACAAAATCAATATGC+TGG | + | chr3_2:78096428-78096447 | Msa0427420:CDS | 25.0% |
!! | ATAAAACAGGGCTTTTTATT+TGG | + | chr3_2:78096783-78096802 | Msa0427420:intron | 25.0% |
!! | AACCAGCAAACTTTTTATTA+TGG | + | chr3_2:78097514-78097533 | Msa0427420:intron | 25.0% |
! | AACCATAATAAAAAGTTTGC+TGG | - | chr3_2:78097519-78097538 | None:intergenic | 25.0% |
! | AAATGATATATGACTAGTAG+TGG | - | chr3_2:78097863-78097882 | None:intergenic | 25.0% |
!! | TGGTGTTTTCTTCTATAATA+TGG | + | chr3_2:78097955-78097974 | Msa0427420:three_prime_UTR | 25.0% |
!! | ATTTTATATGCGTAATAGTC+GGG | + | chr3_2:78098039-78098058 | Msa0427420:three_prime_UTR | 25.0% |
!!! | ACTTGTACCTTTTTTAGTTT+TGG | + | chr3_2:78098163-78098182 | Msa0427420:three_prime_UTR | 25.0% |
ACTAAAAAATAGTTAAGGGC+CGG | - | chr3_2:78092684-78092703 | None:intergenic | 30.0% | |
AGTACTACTAATTGTGACTT+TGG | + | chr3_2:78092777-78092796 | Msa0427420:five_prime_UTR | 30.0% | |
ATTCTGATTTAAATAGCCGA+AGG | - | chr3_2:78092836-78092855 | None:intergenic | 30.0% | |
AAACAAGATTCGAATAAACG+CGG | - | chr3_2:78093060-78093079 | None:intergenic | 30.0% | |
! | AAATCACTATCTGAAACAGT+TGG | - | chr3_2:78093257-78093276 | None:intergenic | 30.0% |
GGTATAATTAATCATCTGTG+AGG | + | chr3_2:78093480-78093499 | Msa0427420:five_prime_UTR | 30.0% | |
!! | AATATTCTAGAGTAGATGGT+AGG | + | chr3_2:78093529-78093548 | Msa0427420:CDS | 30.0% |
AAACTGATAATAGCAATGCT+CGG | + | chr3_2:78093724-78093743 | Msa0427420:CDS | 30.0% | |
TGAAAAGAAAGATGAATCAG+AGG | + | chr3_2:78093965-78093984 | Msa0427420:CDS | 30.0% | |
AACAACAGATAGTAATGTAG+AGG | + | chr3_2:78094043-78094062 | Msa0427420:CDS | 30.0% | |
AAAGTTTGTAATGTTACTGC+TGG | + | chr3_2:78094290-78094309 | Msa0427420:CDS | 30.0% | |
! | TCAATTGTCATTTCATTCTC+TGG | + | chr3_2:78094499-78094518 | Msa0427420:intron | 30.0% |
TCAAAATTGGGTGAAAGTTA+CGG | + | chr3_2:78094613-78094632 | Msa0427420:CDS | 30.0% | |
!! | CAGATTTTTAAAGGCTATAC+TGG | - | chr3_2:78094893-78094912 | None:intergenic | 30.0% |
AAAGTCATTGAAGAACTTTC+AGG | - | chr3_2:78095220-78095239 | None:intergenic | 30.0% | |
CGTATCTTAATTTCCTCTAT+TGG | - | chr3_2:78095255-78095274 | None:intergenic | 30.0% | |
TAGAGGAAATTAAGATACGT+TGG | + | chr3_2:78095256-78095275 | Msa0427420:intron | 30.0% | |
ATGTGCAGTTCATATGTATT+AGG | - | chr3_2:78095328-78095347 | None:intergenic | 30.0% | |
TTTACAATGTTTACTCGATG+TGG | + | chr3_2:78095493-78095512 | Msa0427420:intron | 30.0% | |
GGCATTTATCAATCTTAACT+TGG | + | chr3_2:78095906-78095925 | Msa0427420:intron | 30.0% | |
!! | TTGTTATACAGCTATTTTGG+TGG | + | chr3_2:78095986-78096005 | Msa0427420:intron | 30.0% |
!!! | TGTTATACAGCTATTTTGGT+GGG | + | chr3_2:78095987-78096006 | Msa0427420:intron | 30.0% |
CAAAAACAATTTACAACTGC+AGG | + | chr3_2:78096203-78096222 | Msa0427420:intron | 30.0% | |
TTCCTGAAGATGTTGAAATA+TGG | + | chr3_2:78096309-78096328 | Msa0427420:CDS | 30.0% | |
TTCCATATTTCAACATCTTC+AGG | - | chr3_2:78096314-78096333 | None:intergenic | 30.0% | |
GAAGATGTTGAAATATGGAA+TGG | + | chr3_2:78096314-78096333 | Msa0427420:CDS | 30.0% | |
TCATAACAATCATTGGATAG+TGG | - | chr3_2:78096514-78096533 | None:intergenic | 30.0% | |
GACTAATTCAGCAATTAACT+CGG | - | chr3_2:78096651-78096670 | None:intergenic | 30.0% | |
! | AAGTCTTATCTAAACGGATT+GGG | + | chr3_2:78097123-78097142 | Msa0427420:CDS | 30.0% |
ATGGATATGAACTCAATCTA+TGG | + | chr3_2:78097174-78097193 | Msa0427420:CDS | 30.0% | |
ATATGAACTCAATCTATGGA+GGG | + | chr3_2:78097178-78097197 | Msa0427420:CDS | 30.0% | |
! | TCTTTTCAAAGGTTCAGAAA+AGG | + | chr3_2:78097461-78097480 | Msa0427420:CDS | 30.0% |
!! | AGTTTGCTGGTTATTAATGT+GGG | - | chr3_2:78097506-78097525 | None:intergenic | 30.0% |
!! | AAGTTTGCTGGTTATTAATG+TGG | - | chr3_2:78097507-78097526 | None:intergenic | 30.0% |
!! | TGGTTTTGCTAATGCTTATT+TGG | + | chr3_2:78097534-78097553 | Msa0427420:intron | 30.0% |
! | TTTTGCTAATGCTTATTTGG+TGG | + | chr3_2:78097537-78097556 | Msa0427420:intron | 30.0% |
AGTATGCTATTGTTTAAGCA+CGG | + | chr3_2:78097780-78097799 | Msa0427420:exon | 30.0% | |
! | TTGTATTCGTCTTTTACCTT+TGG | + | chr3_2:78097895-78097914 | Msa0427420:three_prime_UTR | 30.0% |
!! | TTCTATAATATGGTGCCATA+GGG | + | chr3_2:78097965-78097984 | Msa0427420:three_prime_UTR | 30.0% |
GCAACTGAATATATATGGAT+TGG | + | chr3_2:78098102-78098121 | Msa0427420:three_prime_UTR | 30.0% | |
!! | CTGAATATATATGGATTGGA+CGG | + | chr3_2:78098106-78098125 | Msa0427420:three_prime_UTR | 30.0% |
!! | TGAATATATATGGATTGGAC+GGG | + | chr3_2:78098107-78098126 | Msa0427420:three_prime_UTR | 30.0% |
TGCACAACCAAAACTAAAAA+AGG | - | chr3_2:78098173-78098192 | None:intergenic | 30.0% | |
ACTAACCAAAGAAACACATG+CGG | - | chr3_2:78092598-78092617 | None:intergenic | 35.0% | |
AACTAAACTCTCTCTTCCTT+CGG | + | chr3_2:78092817-78092836 | Msa0427420:five_prime_UTR | 35.0% | |
TTTGACAGTGTGTGAATGTT+GGG | - | chr3_2:78092859-78092878 | None:intergenic | 35.0% | |
GAGATTCGAAATTGAGAGAA+AGG | - | chr3_2:78092884-78092903 | None:intergenic | 35.0% | |
GTGAAGAAGCAAAGAAAGAA+AGG | - | chr3_2:78093030-78093049 | None:intergenic | 35.0% | |
!! | GGGAAATATTCTAGAGTAGA+TGG | + | chr3_2:78093525-78093544 | Msa0427420:CDS | 35.0% |
GGTAAGAAAACAGAAGATGA+AGG | + | chr3_2:78093876-78093895 | Msa0427420:CDS | 35.0% | |
AAATAACAAAGACAGCGAAG+AGG | + | chr3_2:78093911-78093930 | Msa0427420:CDS | 35.0% | |
AGATAGTAATGTAGAGGAGA+AGG | + | chr3_2:78094049-78094068 | Msa0427420:CDS | 35.0% | |
AAAGAATCTGATGAAAACGC+TGG | + | chr3_2:78094089-78094108 | Msa0427420:CDS | 35.0% | |
AATGAAACTACGACACAAAC+TGG | + | chr3_2:78094191-78094210 | Msa0427420:CDS | 35.0% | |
AGCAGAGTCAAAGAATGAAA+AGG | + | chr3_2:78094232-78094251 | Msa0427420:CDS | 35.0% | |
TTCTCGATGTTCATAGTGTT+TGG | - | chr3_2:78094372-78094391 | None:intergenic | 35.0% | |
!! | TTAACCTTCTCTCTGCTTTT+AGG | - | chr3_2:78094467-78094486 | None:intergenic | 35.0% |
!! | TGTTATTTCTCCTGCAGATA+TGG | + | chr3_2:78094546-78094565 | Msa0427420:intron | 35.0% |
CATTGTAATACCATATCTGC+AGG | - | chr3_2:78094559-78094578 | None:intergenic | 35.0% | |
!! | ACTAAGCTTGCTGAAGTTAA+GGG | + | chr3_2:78094587-78094606 | Msa0427420:CDS | 35.0% |
!! | AAGTTAAGGGGCATCAAAAT+TGG | + | chr3_2:78094600-78094619 | Msa0427420:CDS | 35.0% |
!! | AGTTAAGGGGCATCAAAATT+GGG | + | chr3_2:78094601-78094620 | Msa0427420:CDS | 35.0% |
CAAAATTGGGTGAAAGTTAC+GGG | + | chr3_2:78094614-78094633 | Msa0427420:CDS | 35.0% | |
!! | CAAGAGGTATGCATTTTGTT+TGG | + | chr3_2:78094707-78094726 | Msa0427420:intron | 35.0% |
TGTGACAACTTGACAAGTTA+GGG | - | chr3_2:78094840-78094859 | None:intergenic | 35.0% | |
!! | TTTTAAAGGCTATACTGGTG+CGG | - | chr3_2:78094888-78094907 | None:intergenic | 35.0% |
ATCTTGTTGATCTAAGCTTG+TGG | + | chr3_2:78094968-78094987 | Msa0427420:intron | 35.0% | |
TCTTGTTGATCTAAGCTTGT+GGG | + | chr3_2:78094969-78094988 | Msa0427420:intron | 35.0% | |
ACAAACAATTTCTTCACTCC+AGG | - | chr3_2:78095043-78095062 | None:intergenic | 35.0% | |
TAATTTCCTCTATTGGCAGT+TGG | - | chr3_2:78095248-78095267 | None:intergenic | 35.0% | |
ACTTCTTCTGATAAAGAAGC+TGG | - | chr3_2:78095423-78095442 | None:intergenic | 35.0% | |
TGCATCATCAAAGCTCTATT+AGG | - | chr3_2:78095539-78095558 | None:intergenic | 35.0% | |
ACACGTGTTATACTAGATGT+TGG | + | chr3_2:78095590-78095609 | Msa0427420:CDS | 35.0% | |
GTTATACTAGATGTTGGATG+TGG | + | chr3_2:78095596-78095615 | Msa0427420:CDS | 35.0% | |
!!! | GTTATACAGCTATTTTGGTG+GGG | + | chr3_2:78095988-78096007 | Msa0427420:intron | 35.0% |
TGCTGTGTAATTCAAACACA+TGG | - | chr3_2:78096087-78096106 | None:intergenic | 35.0% | |
AAACAATTTACAACTGCAGG+TGG | + | chr3_2:78096206-78096225 | Msa0427420:intron | 35.0% | |
TCAGGAAGCTTCTGATAAAT+AGG | - | chr3_2:78096296-78096315 | None:intergenic | 35.0% | |
ATCAGCAAGGATCAAGTTAA+TGG | + | chr3_2:78096463-78096482 | Msa0427420:CDS | 35.0% | |
AAGGATCAAGTTAATGGAGT+TGG | + | chr3_2:78096469-78096488 | Msa0427420:CDS | 35.0% | |
TCGTTGCTCATAACAATCAT+TGG | - | chr3_2:78096521-78096540 | None:intergenic | 35.0% | |
! | TCATCAGATTTTTGACACAG+TGG | - | chr3_2:78096559-78096578 | None:intergenic | 35.0% |
! | GTTTTTGCTCATGTCAGTTA+AGG | - | chr3_2:78096606-78096625 | None:intergenic | 35.0% |
!! | TTTTTATTTGGCTGGAGACT+TGG | + | chr3_2:78096795-78096814 | Msa0427420:intron | 35.0% |
TGACAACCAATATGGTACAT+TGG | - | chr3_2:78097022-78097041 | None:intergenic | 35.0% | |
TATCAGCAGCAAAATCTTCA+GGG | - | chr3_2:78097077-78097096 | None:intergenic | 35.0% | |
TTATCAGCAGCAAAATCTTC+AGG | - | chr3_2:78097078-78097097 | None:intergenic | 35.0% | |
TTGCTGCTGATAATAAACAC+TGG | + | chr3_2:78097085-78097104 | Msa0427420:CDS | 35.0% | |
! | GTGTCCAAGTCTTATCTAAA+CGG | + | chr3_2:78097117-78097136 | Msa0427420:CDS | 35.0% |
CAATCCGTTTAGATAAGACT+TGG | - | chr3_2:78097124-78097143 | None:intergenic | 35.0% | |
! | CAAGTCTTATCTAAACGGAT+TGG | + | chr3_2:78097122-78097141 | Msa0427420:CDS | 35.0% |
GAATTCAGTGGTCAAATGTA+CGG | + | chr3_2:78097145-78097164 | Msa0427420:CDS | 35.0% | |
GATATGAACTCAATCTATGG+AGG | + | chr3_2:78097177-78097196 | Msa0427420:CDS | 35.0% | |
! | CCGTTCATAAATAATGGGAA+GGG | - | chr3_2:78097359-78097378 | None:intergenic | 35.0% |
CCCTTCCCATTATTTATGAA+CGG | + | chr3_2:78097356-78097375 | Msa0427420:CDS | 35.0% | |
CCTTCCCATTATTTATGAAC+GGG | + | chr3_2:78097357-78097376 | Msa0427420:CDS | 35.0% | |
CTTCCCATTATTTATGAACG+GGG | + | chr3_2:78097358-78097377 | Msa0427420:CDS | 35.0% | |
AGACCCCGTTCATAAATAAT+GGG | - | chr3_2:78097364-78097383 | None:intergenic | 35.0% | |
AAGACCCCGTTCATAAATAA+TGG | - | chr3_2:78097365-78097384 | None:intergenic | 35.0% | |
! | ATTTATGAACGGGGTCTTTT+TGG | + | chr3_2:78097367-78097386 | Msa0427420:CDS | 35.0% |
TTGAAAAGAGATGATCTGCA+TGG | - | chr3_2:78097450-78097469 | None:intergenic | 35.0% | |
! | TGCAGATCATCTCTTTTCAA+AGG | + | chr3_2:78097450-78097469 | Msa0427420:CDS | 35.0% |
GATGAGATGCCAAAATACTT+GGG | + | chr3_2:78097802-78097821 | Msa0427420:three_prime_UTR | 35.0% | |
!! | CTTCTATAATATGGTGCCAT+AGG | + | chr3_2:78097964-78097983 | Msa0427420:three_prime_UTR | 35.0% |
TTAAGGAAGAGGAAACCATG+AGG | - | chr3_2:78092646-78092665 | None:intergenic | 40.0% | |
AAAAAATAGTTAAGGGCCGG+AGG | - | chr3_2:78092681-78092700 | None:intergenic | 40.0% | |
GTTTGACAGTGTGTGAATGT+TGG | - | chr3_2:78092860-78092879 | None:intergenic | 40.0% | |
CAGATCTAAGAGGAAGATGA+AGG | - | chr3_2:78092943-78092962 | None:intergenic | 40.0% | |
TAGCAAGAAGCAGATCTAAG+AGG | - | chr3_2:78092953-78092972 | None:intergenic | 40.0% | |
CGATCTGAGAGATGAAGATT+GGG | - | chr3_2:78093000-78093019 | None:intergenic | 40.0% | |
!!! | CGAATCTTGTTTTCTGCGTT+TGG | + | chr3_2:78093068-78093087 | Msa0427420:intron | 40.0% |
! | TGCTTCGTAATTTGCGATTC+TGG | + | chr3_2:78093380-78093399 | Msa0427420:intron | 40.0% |
TTTCCCTAAAGCCATGTCTT+CGG | - | chr3_2:78093511-78093530 | None:intergenic | 40.0% | |
!! | TTTGTTGCTCTAGCCTTGAT+TGG | + | chr3_2:78093591-78093610 | Msa0427420:CDS | 40.0% |
!! | TTGTTGCTCTAGCCTTGATT+GGG | + | chr3_2:78093592-78093611 | Msa0427420:CDS | 40.0% |
!! | ACCTCATTTTTACTCTCCTG+AGG | - | chr3_2:78093669-78093688 | None:intergenic | 40.0% |
GGAGAGTAAAAATGAGGTGA+AGG | + | chr3_2:78093671-78093690 | Msa0427420:CDS | 40.0% | |
! | ATTTTCCTCCGACTTCTCTT+CGG | - | chr3_2:78093814-78093833 | None:intergenic | 40.0% |
TAGTAATGTAGAGGAGAAGG+TGG | + | chr3_2:78094052-78094071 | Msa0427420:CDS | 40.0% | |
! | CTCATTTGAACTCTGGTCTT+TGG | - | chr3_2:78094138-78094157 | None:intergenic | 40.0% |
CAAAGACCAGAGTTCAAATG+AGG | + | chr3_2:78094136-78094155 | Msa0427420:CDS | 40.0% | |
GGAATACCTCATTTGAACTC+TGG | - | chr3_2:78094145-78094164 | None:intergenic | 40.0% | |
! | TCAAATGAGGTATTCCCTTC+CGG | + | chr3_2:78094149-78094168 | Msa0427420:CDS | 40.0% |
! | AACTGGATCGTTTTCTACTC+AGG | + | chr3_2:78094208-78094227 | Msa0427420:CDS | 40.0% |
TTTCCAATTGTACCCAGTCT+TGG | - | chr3_2:78094273-78094292 | None:intergenic | 40.0% | |
TAATCGCTTTCCAGTTGTCA+AGG | - | chr3_2:78094334-78094353 | None:intergenic | 40.0% | |
TTGACAACTGGAAAGCGATT+AGG | + | chr3_2:78094333-78094352 | Msa0427420:CDS | 40.0% | |
! | ATAGAGCGCTTATATCCTTC+AGG | - | chr3_2:78094437-78094456 | None:intergenic | 40.0% |
GATATAAGCGCTCTATTGAG+TGG | + | chr3_2:78094441-78094460 | Msa0427420:CDS | 40.0% | |
!! | CACTAAGCTTGCTGAAGTTA+AGG | + | chr3_2:78094586-78094605 | Msa0427420:CDS | 40.0% |
!! | CTAAGCTTGCTGAAGTTAAG+GGG | + | chr3_2:78094588-78094607 | Msa0427420:CDS | 40.0% |
!! | GGTGAGTATCTTACTTTTCC+TGG | + | chr3_2:78094635-78094654 | Msa0427420:CDS | 40.0% |
!! | GAGTATCTTACTTTTCCTGG+TGG | + | chr3_2:78094638-78094657 | Msa0427420:CDS | 40.0% |
!! | TATCTTACTTTTCCTGGTGG+TGG | + | chr3_2:78094641-78094660 | Msa0427420:CDS | 40.0% |
GTGTGACAACTTGACAAGTT+AGG | - | chr3_2:78094841-78094860 | None:intergenic | 40.0% | |
TTTGTCCTGTTGTGCGTAAA+CGG | - | chr3_2:78095304-78095323 | None:intergenic | 40.0% | |
ATATGAACTGCACATCTGTG+AGG | + | chr3_2:78095333-78095352 | Msa0427420:intron | 40.0% | |
TGAGCTTCATGTTCATCCTT+TGG | - | chr3_2:78095680-78095699 | None:intergenic | 40.0% | |
AAAGGATGAACATGAAGCTC+AGG | + | chr3_2:78095679-78095698 | Msa0427420:CDS | 40.0% | |
! | AGGTTCAATTTGCTCTTGAG+AGG | + | chr3_2:78095699-78095718 | Msa0427420:CDS | 40.0% |
! | GGTTCAATTTGCTCTTGAGA+GGG | + | chr3_2:78095700-78095719 | Msa0427420:CDS | 40.0% |
! | GTTCAATTTGCTCTTGAGAG+GGG | + | chr3_2:78095701-78095720 | Msa0427420:CDS | 40.0% |
! | TTCAATTTGCTCTTGAGAGG+GGG | + | chr3_2:78095702-78095721 | Msa0427420:CDS | 40.0% |
TCCTGCTATATCTGCTGTAA+TGG | + | chr3_2:78095727-78095746 | Msa0427420:CDS | 40.0% | |
CCTGCTATATCTGCTGTAAT+GGG | + | chr3_2:78095728-78095747 | Msa0427420:CDS | 40.0% | |
TGAATACCTTCAATGTGCCA+TGG | - | chr3_2:78095818-78095837 | None:intergenic | 40.0% | |
! | TGCAGGTGGTAAACTTCTTT+TGG | + | chr3_2:78096220-78096239 | Msa0427420:intron | 40.0% |
GACCATACAAAAAAACCACC+AGG | - | chr3_2:78096266-78096285 | None:intergenic | 40.0% | |
! | GGAACTTGTTTCAATCAGCA+AGG | + | chr3_2:78096450-78096469 | Msa0427420:CDS | 40.0% |
! | GGATAGTGGCTTCTTGTATA+TGG | - | chr3_2:78096500-78096519 | None:intergenic | 40.0% |
! | TCAGATTTTTGACACAGTGG+AGG | - | chr3_2:78096556-78096575 | None:intergenic | 40.0% |
AAGGAATACCATGCTGCATT+GGG | - | chr3_2:78096583-78096602 | None:intergenic | 40.0% | |
TTGCTCATGTCAGTTAAGGA+AGG | - | chr3_2:78096602-78096621 | None:intergenic | 40.0% | |
!! | TCACTTTTCCAAGACAGGAA+GGG | - | chr3_2:78096735-78096754 | None:intergenic | 40.0% |
!! | AACAGGGCTTTTTATTTGGC+TGG | + | chr3_2:78096787-78096806 | Msa0427420:intron | 40.0% |
TCTAATCTCTCTGATGTGAC+AGG | + | chr3_2:78096905-78096924 | Msa0427420:intron | 40.0% | |
TGGGAACTTGACAACCAATA+TGG | - | chr3_2:78097030-78097049 | None:intergenic | 40.0% | |
CTTACCATAGACTCCAACTT+GGG | - | chr3_2:78097049-78097068 | None:intergenic | 40.0% | |
ATCAGCAGCAAAATCTTCAG+GGG | - | chr3_2:78097076-78097095 | None:intergenic | 40.0% | |
!! | TAAACGGATTGGGAATTCAG+TGG | + | chr3_2:78097133-78097152 | Msa0427420:CDS | 40.0% |
GTCAAATGTACGGAATGTCA+TGG | + | chr3_2:78097155-78097174 | Msa0427420:CDS | 40.0% | |
CAATCGGTAGATGTCAAACA+CGG | - | chr3_2:78097258-78097277 | None:intergenic | 40.0% | |
! | TGTTTGACATCTACCGATTG+TGG | + | chr3_2:78097258-78097277 | Msa0427420:intron | 40.0% |
TTTCAAAGCTGCAGCAAATC+TGG | - | chr3_2:78097287-78097306 | None:intergenic | 40.0% | |
!! | AATAATGGGAAGGGTATCTG+CGG | - | chr3_2:78097350-78097369 | None:intergenic | 40.0% |
! | CCCGTTCATAAATAATGGGA+AGG | - | chr3_2:78097360-78097379 | None:intergenic | 40.0% |
AATCATTTAGCACCTATCCC+AGG | + | chr3_2:78097410-78097429 | Msa0427420:CDS | 40.0% | |
AAAAGAGATGATCTGCATGG+AGG | - | chr3_2:78097447-78097466 | None:intergenic | 40.0% | |
CTGAAGGAAAGCTTATTGTC+CGG | + | chr3_2:78097615-78097634 | Msa0427420:CDS | 40.0% | |
TGAAGGAAAGCTTATTGTCC+GGG | + | chr3_2:78097616-78097635 | Msa0427420:CDS | 40.0% | |
TAACAAACCCTCCTTATCCT+TGG | - | chr3_2:78097714-78097733 | None:intergenic | 40.0% | |
GGATGAGATGCCAAAATACT+TGG | + | chr3_2:78097801-78097820 | Msa0427420:three_prime_UTR | 40.0% | |
ATGCCAAAATACTTGGGTTC+CGG | + | chr3_2:78097808-78097827 | Msa0427420:three_prime_UTR | 40.0% | |
! | ACACAAGAATTTTGAGCAGC+CGG | - | chr3_2:78097830-78097849 | None:intergenic | 40.0% |
CAAAGAAACACATGCGGCTA+AGG | - | chr3_2:78092592-78092611 | None:intergenic | 45.0% | |
CTTAGCCGCATGTGTTTCTT+TGG | + | chr3_2:78092590-78092609 | Msa0427420:five_prime_UTR | 45.0% | |
! | ATCTGAGCATTGTGTGAACG+CGG | - | chr3_2:78092916-78092935 | None:intergenic | 45.0% |
! | GCTTCTTGCTATAGAACCAG+AGG | + | chr3_2:78092962-78092981 | Msa0427420:five_prime_UTR | 45.0% |
GAGAGATGAAGATTGGGAAC+AGG | - | chr3_2:78092994-78093013 | None:intergenic | 45.0% | |
GCGATCTGAGAGATGAAGAT+TGG | - | chr3_2:78093001-78093020 | None:intergenic | 45.0% | |
! | GATCCGAAGACATGGCTTTA+GGG | + | chr3_2:78093505-78093524 | Msa0427420:exon | 45.0% |
!! | TGTTGCTCTAGCCTTGATTG+GGG | + | chr3_2:78093593-78093612 | Msa0427420:CDS | 45.0% |
CATCATCCAAACCCCAATCA+AGG | - | chr3_2:78093607-78093626 | None:intergenic | 45.0% | |
TGTAGTTCCCGTGCAAAATG+AGG | + | chr3_2:78093638-78093657 | Msa0427420:CDS | 45.0% | |
GCCTCAGGAGAGTAAAAATG+AGG | + | chr3_2:78093665-78093684 | Msa0427420:CDS | 45.0% | |
CGGCAGTTTGAAGATAATCC+TGG | + | chr3_2:78093744-78093763 | Msa0427420:CDS | 45.0% | |
! | TAATCCTGGTGATTTGCCTG+AGG | + | chr3_2:78093758-78093777 | Msa0427420:CDS | 45.0% |
GAAGTCGGAGGAAAATTCCA+CGG | + | chr3_2:78093818-78093837 | Msa0427420:CDS | 45.0% | |
ATCTTCAGAAGACTTCTCCG+TGG | - | chr3_2:78093838-78093857 | None:intergenic | 45.0% | |
AGATACGAAGACAGAAGACG+AGG | + | chr3_2:78093854-78093873 | Msa0427420:CDS | 45.0% | |
GATACGAAGACAGAAGACGA+GGG | + | chr3_2:78093855-78093874 | Msa0427420:CDS | 45.0% | |
! | CAAATGAGGTATTCCCTTCC+GGG | + | chr3_2:78094150-78094169 | Msa0427420:CDS | 45.0% |
! | AAATGAGGTATTCCCTTCCG+GGG | + | chr3_2:78094151-78094170 | Msa0427420:CDS | 45.0% |
ATTCAAGAGTCCTCCAAGAC+TGG | + | chr3_2:78094257-78094276 | Msa0427420:CDS | 45.0% | |
TTCAAGAGTCCTCCAAGACT+GGG | + | chr3_2:78094258-78094277 | Msa0427420:CDS | 45.0% | |
TCAAGGCATGGGATAAAGTC+GGG | - | chr3_2:78094317-78094336 | None:intergenic | 45.0% | |
GTCAAGGCATGGGATAAAGT+CGG | - | chr3_2:78094318-78094337 | None:intergenic | 45.0% | |
TTATCCCATGCCTTGACAAC+TGG | + | chr3_2:78094321-78094340 | Msa0427420:CDS | 45.0% | |
CTTTCCAGTTGTCAAGGCAT+GGG | - | chr3_2:78094328-78094347 | None:intergenic | 45.0% | |
GGAAAGCGATTAGGAGTCTT+CGG | + | chr3_2:78094342-78094361 | Msa0427420:CDS | 45.0% | |
ATCCTTCAGGAAGAGAGACA+AGG | - | chr3_2:78094424-78094443 | None:intergenic | 45.0% | |
ACTTCAGCAAGCTTAGTGTG+TGG | - | chr3_2:78094584-78094603 | None:intergenic | 45.0% | |
GTGGAACCCAATTCAAGCAT+GGG | + | chr3_2:78094660-78094679 | Msa0427420:CDS | 45.0% | |
TGGAACCCAATTCAAGCATG+GGG | + | chr3_2:78094661-78094680 | Msa0427420:CDS | 45.0% | |
AAGTGCCCCATGCTTGAATT+GGG | - | chr3_2:78094669-78094688 | None:intergenic | 45.0% | |
TACCAGTTCGGTCTAAACTG+TGG | - | chr3_2:78095105-78095124 | None:intergenic | 45.0% | |
ACAGTTTAGACCGAACTGGT+AGG | + | chr3_2:78095104-78095123 | Msa0427420:intron | 45.0% | |
TTAGACCGAACTGGTAGGAA+TGG | + | chr3_2:78095109-78095128 | Msa0427420:intron | 45.0% | |
! | ATGTGCCATTCCTACCAGTT+CGG | - | chr3_2:78095117-78095136 | None:intergenic | 45.0% |
TCTGTACCAACTGCCAATAG+AGG | + | chr3_2:78095239-78095258 | Msa0427420:intron | 45.0% | |
TTGTCCTGTTGTGCGTAAAC+GGG | - | chr3_2:78095303-78095322 | None:intergenic | 45.0% | |
! | TGCAATGTCACTTGCACCAA+AGG | + | chr3_2:78095661-78095680 | Msa0427420:CDS | 45.0% |
CCCATTACAGCAGATATAGC+AGG | - | chr3_2:78095731-78095750 | None:intergenic | 45.0% | |
TCAAATACTCTCCCAGGGAA+GGG | - | chr3_2:78095767-78095786 | None:intergenic | 45.0% | |
ATCAAATACTCTCCCAGGGA+AGG | - | chr3_2:78095768-78095787 | None:intergenic | 45.0% | |
CTGCATCAAATACTCTCCCA+GGG | - | chr3_2:78095772-78095791 | None:intergenic | 45.0% | |
ACTGCATCAAATACTCTCCC+AGG | - | chr3_2:78095773-78095792 | None:intergenic | 45.0% | |
GAACTCTACAACGTGCACAA+TGG | - | chr3_2:78095796-78095815 | None:intergenic | 45.0% | |
AGAGTTCCATGGCACATTGA+AGG | + | chr3_2:78095809-78095828 | Msa0427420:CDS | 45.0% | |
!!! | ATACAGCTATTTTGGTGGGG+TGG | + | chr3_2:78095991-78096010 | Msa0427420:intron | 45.0% |
!!! | TACAGCTATTTTGGTGGGGT+GGG | + | chr3_2:78095992-78096011 | Msa0427420:intron | 45.0% |
!! | TGGAGCTGAACAGAGTATTG+CGG | + | chr3_2:78096240-78096259 | Msa0427420:CDS | 45.0% |
!!! | GGCCTGGTGGTTTTTTTGTA+TGG | + | chr3_2:78096261-78096280 | Msa0427420:CDS | 45.0% |
GAAGGAATACCATGCTGCAT+TGG | - | chr3_2:78096584-78096603 | None:intergenic | 45.0% | |
! | ACTTTTCCAAGACAGGAAGG+GGG | - | chr3_2:78096733-78096752 | None:intergenic | 45.0% |
! | CACTTTTCCAAGACAGGAAG+GGG | - | chr3_2:78096734-78096753 | None:intergenic | 45.0% |
!! | CTCACTTTTCCAAGACAGGA+AGG | - | chr3_2:78096736-78096755 | None:intergenic | 45.0% |
CTTCCTGTCTTGGAAAAGTG+AGG | + | chr3_2:78096734-78096753 | Msa0427420:intron | 45.0% | |
!! | GTTCCTCACTTTTCCAAGAC+AGG | - | chr3_2:78096740-78096759 | None:intergenic | 45.0% |
CCAGTTAGTTCAAGTGAACG+CGG | + | chr3_2:78096961-78096980 | Msa0427420:CDS | 45.0% | |
CAGTTAGTTCAAGTGAACGC+GGG | + | chr3_2:78096962-78096981 | Msa0427420:CDS | 45.0% | |
ATATGGTACATTGGTCAGCC+TGG | - | chr3_2:78097013-78097032 | None:intergenic | 45.0% | |
GGCTGACCAATGTACCATAT+TGG | + | chr3_2:78097013-78097032 | Msa0427420:CDS | 45.0% | |
TGGTTGTCAAGTTCCCAAGT+TGG | + | chr3_2:78097033-78097052 | Msa0427420:CDS | 45.0% | |
! | AGTTCCCAAGTTGGAGTCTA+TGG | + | chr3_2:78097042-78097061 | Msa0427420:CDS | 45.0% |
GCTTACCATAGACTCCAACT+TGG | - | chr3_2:78097050-78097069 | None:intergenic | 45.0% | |
AGTTGGAGTCTATGGTAAGC+CGG | + | chr3_2:78097050-78097069 | Msa0427420:CDS | 45.0% | |
GCAAATCTGGAAGCCACAAT+CGG | - | chr3_2:78097274-78097293 | None:intergenic | 45.0% | |
CGGACAATAAGCTTTCCTTC+AGG | - | chr3_2:78097617-78097636 | None:intergenic | 45.0% | |
TAATGACCTCAACAGTGTCC+CGG | - | chr3_2:78097637-78097656 | None:intergenic | 45.0% | |
CATTAACGAGCTTGAGAGCA+TGG | + | chr3_2:78097652-78097671 | Msa0427420:CDS | 45.0% | |
CATGGTAAAGTCCATGCAGT+GGG | + | chr3_2:78097670-78097689 | Msa0427420:CDS | 45.0% | |
CATGACCTACTCCAAGGATA+AGG | + | chr3_2:78097700-78097719 | Msa0427420:CDS | 45.0% | |
ACCTACTCCAAGGATAAGGA+GGG | + | chr3_2:78097704-78097723 | Msa0427420:CDS | 45.0% | |
TTGAGTGTCTCTGTCTCCTT+AGG | - | chr3_2:78097761-78097780 | None:intergenic | 45.0% | |
!! | TAATATGGTGCCATAGGGTG+AGG | + | chr3_2:78097970-78097989 | Msa0427420:three_prime_UTR | 45.0% |
!! | AATATGGTGCCATAGGGTGA+GGG | + | chr3_2:78097971-78097990 | Msa0427420:three_prime_UTR | 45.0% |
ATCAGATTTCCCTCACCCTA+TGG | - | chr3_2:78097983-78098002 | None:intergenic | 45.0% | |
!! | ATATAAAATAAATAAATCAA+TGG | - | chr3_2:78098028-78098047 | None:intergenic | 5.0% |
AATGTCTCCCTCAGTCCTCA+TGG | + | chr3_2:78092628-78092647 | Msa0427420:five_prime_UTR | 50.0% | |
GAGGAAACCATGAGGACTGA+GGG | - | chr3_2:78092638-78092657 | None:intergenic | 50.0% | |
AGAGGAAACCATGAGGACTG+AGG | - | chr3_2:78092639-78092658 | None:intergenic | 50.0% | |
GAGGGAGTGACTTAAGGAAG+AGG | - | chr3_2:78092657-78092676 | None:intergenic | 50.0% | |
TTAAGTCACTCCCTCTCCTC+CGG | + | chr3_2:78092662-78092681 | Msa0427420:five_prime_UTR | 50.0% | |
CGATCCGAAGACATGGCTTT+AGG | + | chr3_2:78093504-78093523 | Msa0427420:exon | 50.0% | |
!! | CTCTAGCCTTGATTGGGGTT+TGG | + | chr3_2:78093598-78093617 | Msa0427420:CDS | 50.0% |
! | AGGCACGTCCTCATTTTGCA+CGG | - | chr3_2:78093649-78093668 | None:intergenic | 50.0% |
TGAGGTGAAGGAACAGACTG+AGG | + | chr3_2:78093683-78093702 | Msa0427420:CDS | 50.0% | |
TGAAGGAACAGACTGAGGTG+AGG | + | chr3_2:78093688-78093707 | Msa0427420:CDS | 50.0% | |
GAAGGAACAGACTGAGGTGA+GGG | + | chr3_2:78093689-78093708 | Msa0427420:CDS | 50.0% | |
TGTCAGCTCCGAAGAGAAGT+CGG | + | chr3_2:78093803-78093822 | Msa0427420:CDS | 50.0% | |
CCAATTGTACCCAGTCTTGG+AGG | - | chr3_2:78094270-78094289 | None:intergenic | 50.0% | |
CCTCCAAGACTGGGTACAAT+TGG | + | chr3_2:78094267-78094286 | Msa0427420:CDS | 50.0% | |
CAAGGCATGGGATAAAGTCG+GGG | - | chr3_2:78094316-78094335 | None:intergenic | 50.0% | |
GCTTTCCAGTTGTCAAGGCA+TGG | - | chr3_2:78094329-78094348 | None:intergenic | 50.0% | |
TTCAGGAAGAGAGACAAGGC+AGG | - | chr3_2:78094420-78094439 | None:intergenic | 50.0% | |
TGCCTTGTCTCTCTTCCTGA+AGG | + | chr3_2:78094419-78094438 | Msa0427420:CDS | 50.0% | |
GTGGCCTAAAAGCAGAGAGA+AGG | + | chr3_2:78094460-78094479 | Msa0427420:CDS | 50.0% | |
TTGAATTGGGTTCCACCACC+AGG | - | chr3_2:78094656-78094675 | None:intergenic | 50.0% | |
GGTGGAACCCAATTCAAGCA+TGG | + | chr3_2:78094659-78094678 | Msa0427420:CDS | 50.0% | |
! | GAAGTGCCCCATGCTTGAAT+TGG | - | chr3_2:78094670-78094689 | None:intergenic | 50.0% |
TGCCACAGTTTAGACCGAAC+TGG | + | chr3_2:78095100-78095119 | Msa0427420:intron | 50.0% | |
TGTCCTGTTGTGCGTAAACG+GGG | - | chr3_2:78095302-78095321 | None:intergenic | 50.0% | |
AGACTCTGCCTGACATTGCT+TGG | + | chr3_2:78095558-78095577 | Msa0427420:intron | 50.0% | |
GACTCTGCCTGACATTGCTT+GGG | + | chr3_2:78095559-78095578 | Msa0427420:intron | 50.0% | |
ACTCTGCCTGACATTGCTTG+GGG | + | chr3_2:78095560-78095579 | Msa0427420:CDS | 50.0% | |
AAAGAGAAAGCCTCCGAAGC+TGG | - | chr3_2:78095627-78095646 | None:intergenic | 50.0% | |
!! | CTGCTGTAATGGGCACAAAG+AGG | + | chr3_2:78095738-78095757 | Msa0427420:CDS | 50.0% |
GTGCACGTTGTAGAGTTCCA+TGG | + | chr3_2:78095798-78095817 | Msa0427420:CDS | 50.0% | |
! | TTTTGGTGGGGTGGGTATGT+TGG | + | chr3_2:78096000-78096019 | Msa0427420:intron | 50.0% |
CTGATGATCCCAATGCAGCA+TGG | + | chr3_2:78096572-78096591 | Msa0427420:CDS | 50.0% | |
TTCTTACCCCCTTCCTGTCT+TGG | + | chr3_2:78096724-78096743 | Msa0427420:intron | 50.0% | |
CCGCGTTCACTTGAACTAAC+TGG | - | chr3_2:78096964-78096983 | None:intergenic | 50.0% | |
CGGTAGATGTCAAACACGGA+AGG | - | chr3_2:78097254-78097273 | None:intergenic | 50.0% | |
GAGATCATACGTCCTGGGAT+AGG | - | chr3_2:78097425-78097444 | None:intergenic | 50.0% | |
TGGAGGAGATCATACGTCCT+GGG | - | chr3_2:78097430-78097449 | None:intergenic | 50.0% | |
ATGGAGGAGATCATACGTCC+TGG | - | chr3_2:78097431-78097450 | None:intergenic | 50.0% | |
! | CTGAGGTTGATCGGATTCTC+AGG | + | chr3_2:78097591-78097610 | Msa0427420:CDS | 50.0% |
TATTGTCCGGGACACTGTTG+AGG | + | chr3_2:78097628-78097647 | Msa0427420:CDS | 50.0% | |
GCATGGTAAAGTCCATGCAG+TGG | + | chr3_2:78097669-78097688 | Msa0427420:CDS | 50.0% | |
GACCTACTCCAAGGATAAGG+AGG | + | chr3_2:78097703-78097722 | Msa0427420:CDS | 50.0% | |
ACCCTCCTTATCCTTGGAGT+AGG | - | chr3_2:78097708-78097727 | None:intergenic | 50.0% | |
TATGTGTCCAGAAGTCCACC+TGG | + | chr3_2:78097732-78097751 | Msa0427420:CDS | 50.0% | |
! | CAGCCGGAACCCAAGTATTT+TGG | - | chr3_2:78097814-78097833 | None:intergenic | 50.0% |
GGAGGAGAGGGAGTGACTTA+AGG | - | chr3_2:78092663-78092682 | None:intergenic | 55.0% | |
TAGTTAAGGGCCGGAGGAGA+GGG | - | chr3_2:78092675-78092694 | None:intergenic | 55.0% | |
ATAGTTAAGGGCCGGAGGAG+AGG | - | chr3_2:78092676-78092695 | None:intergenic | 55.0% | |
TGGGAACAGGAACGTACCTC+TGG | - | chr3_2:78092981-78093000 | None:intergenic | 55.0% | |
GTGAGGTCGATCCGAAGACA+TGG | + | chr3_2:78093497-78093516 | Msa0427420:exon | 55.0% | |
! | GGCACGTCCTCATTTTGCAC+GGG | - | chr3_2:78093648-78093667 | None:intergenic | 55.0% |
GCAAAATGAGGACGTGCCTC+AGG | + | chr3_2:78093650-78093669 | Msa0427420:CDS | 55.0% | |
GCATCCTCAGGCAAATCACC+AGG | - | chr3_2:78093765-78093784 | None:intergenic | 55.0% | |
TTTGCCTGAGGATGCGACCA+AGG | + | chr3_2:78093770-78093789 | Msa0427420:CDS | 55.0% | |
TTGCCTGAGGATGCGACCAA+GGG | + | chr3_2:78093771-78093790 | Msa0427420:CDS | 55.0% | |
GCTGACATTGCTATCCCCCT+TGG | - | chr3_2:78093790-78093809 | None:intergenic | 55.0% | |
!! | CAGCGAAGAGGCGTCTACTA+AGG | + | chr3_2:78093923-78093942 | Msa0427420:CDS | 55.0% |
TAGAAGCTCAGACTGAGCCC+CGG | - | chr3_2:78094171-78094190 | None:intergenic | 55.0% | |
GGAAGAGAGACAAGGCAGGT+GGG | - | chr3_2:78094416-78094435 | None:intergenic | 55.0% | |
AGGAAGAGAGACAAGGCAGG+TGG | - | chr3_2:78094417-78094436 | None:intergenic | 55.0% | |
GCTTGTGGGAAGCAGCTCAT+AGG | + | chr3_2:78094983-78095002 | Msa0427420:intron | 55.0% | |
TTGTGCGTAAACGGGGAGGA+GGG | - | chr3_2:78095295-78095314 | None:intergenic | 55.0% | |
ACTGCACATCTGTGAGGCAC+TGG | + | chr3_2:78095339-78095358 | Msa0427420:intron | 55.0% | |
CGTTTGCCCCAAGCAATGTC+AGG | - | chr3_2:78095569-78095588 | None:intergenic | 55.0% | |
GGATGTGGAGTTGCCAGCTT+CGG | + | chr3_2:78095611-78095630 | Msa0427420:CDS | 55.0% | |
ACAAAGAGGCTTCCCTTCCC+TGG | + | chr3_2:78095752-78095771 | Msa0427420:CDS | 55.0% | |
CAAAGAGGCTTCCCTTCCCT+GGG | + | chr3_2:78095753-78095772 | Msa0427420:CDS | 55.0% | |
!! | CTGAACAGAGTATTGCGGCC+TGG | + | chr3_2:78096245-78096264 | Msa0427420:CDS | 55.0% |
!! | AACAGAGTATTGCGGCCTGG+TGG | + | chr3_2:78096248-78096267 | Msa0427420:CDS | 55.0% |
GGTCACAGTGGCCAGAAAAG+TGG | + | chr3_2:78096983-78097002 | Msa0427420:CDS | 55.0% | |
GCAGCAAAATCTTCAGGGGC+CGG | - | chr3_2:78097072-78097091 | None:intergenic | 55.0% | |
GATCGGATTCTCAGGCCTGA+AGG | + | chr3_2:78097599-78097618 | Msa0427420:CDS | 55.0% | |
GGTAAAGTCCATGCAGTGGG+AGG | + | chr3_2:78097673-78097692 | Msa0427420:CDS | 55.0% | |
GGTTCGCATGACCTACTCCA+AGG | + | chr3_2:78097694-78097713 | Msa0427420:CDS | 55.0% | |
TGCCTGAGGATGCGACCAAG+GGG | + | chr3_2:78093772-78093791 | Msa0427420:CDS | 60.0% | |
CAGCTCCGAAGAGAAGTCGG+AGG | + | chr3_2:78093806-78093825 | Msa0427420:CDS | 60.0% | |
AGGCAGGTGGGAGGTTCTTC+AGG | - | chr3_2:78094404-78094423 | None:intergenic | 60.0% | |
AGAGAGACAAGGCAGGTGGG+AGG | - | chr3_2:78094413-78094432 | None:intergenic | 60.0% | |
TGTGCGTAAACGGGGAGGAG+GGG | - | chr3_2:78095294-78095313 | None:intergenic | 60.0% | |
GTTGTGCGTAAACGGGGAGG+AGG | - | chr3_2:78095296-78095315 | None:intergenic | 60.0% | |
CCTGTTGTGCGTAAACGGGG+AGG | - | chr3_2:78095299-78095318 | None:intergenic | 60.0% | |
CCTCCCCGTTTACGCACAAC+AGG | + | chr3_2:78095296-78095315 | Msa0427420:intron | 60.0% | |
TGTGGAGTTGCCAGCTTCGG+AGG | + | chr3_2:78095614-78095633 | Msa0427420:CDS | 60.0% | |
CAAGTGAACGCGGGTCACAG+TGG | + | chr3_2:78096971-78096990 | Msa0427420:CDS | 60.0% | |
!!! | AGCCTGGCTGGCCACTTTTC+TGG | - | chr3_2:78096997-78097016 | None:intergenic | 60.0% |
GGTACATTGGTCAGCCTGGC+TGG | - | chr3_2:78097009-78097028 | None:intergenic | 60.0% | |
CATGCGAACCTCCCACTGCA+TGG | - | chr3_2:78097684-78097703 | None:intergenic | 60.0% | |
GTGTCCAGAAGTCCACCTGG+CGG | + | chr3_2:78097735-78097754 | Msa0427420:CDS | 60.0% | |
GCCTGAGGATGCGACCAAGG+GGG | + | chr3_2:78093773-78093792 | Msa0427420:CDS | 65.0% | |
TCCCCCTTGGTCGCATCCTC+AGG | - | chr3_2:78093777-78093796 | None:intergenic | 65.0% | |
GCTCAGACTGAGCCCCGGAA+GGG | - | chr3_2:78094166-78094185 | None:intergenic | 65.0% | |
AGCTCAGACTGAGCCCCGGA+AGG | - | chr3_2:78094167-78094186 | None:intergenic | 65.0% | |
TGCGTAAACGGGGAGGAGGG+GGG | - | chr3_2:78095292-78095311 | None:intergenic | 65.0% | |
GTGCGTAAACGGGGAGGAGG+GGG | - | chr3_2:78095293-78095312 | None:intergenic | 65.0% | |
GGCCAGAAAAGTGGCCAGCC+AGG | + | chr3_2:78096992-78097011 | Msa0427420:CDS | 65.0% | |
! | TAGGCCGCCAGGTGGACTTC+TGG | - | chr3_2:78097742-78097761 | None:intergenic | 65.0% |
GAAGTCCACCTGGCGGCCTA+AGG | + | chr3_2:78097742-78097761 | Msa0427420:CDS | 65.0% | |
TGTCTCCTTAGGCCGCCAGG+TGG | - | chr3_2:78097750-78097769 | None:intergenic | 65.0% | |
CTCTGTCTCCTTAGGCCGCC+AGG | - | chr3_2:78097753-78097772 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 78092583 | 78098207 | 78092583 | ID=Msa0427420;Name=Msa0427420 |
chr3_2 | mRNA | 78092583 | 78098207 | 78092583 | ID=Msa0427420-mRNA-1;Parent=Msa0427420;Name=Msa0427420-mRNA-1;_AED=0.07;_eAED=0.07;_QI=422|1|1|1|0.77|0.7|10|411|789 |
chr3_2 | exon | 78092583 | 78092746 | 78092583 | ID=Msa0427420-mRNA-1:exon:20494;Parent=Msa0427420-mRNA-1 |
chr3_2 | exon | 78092772 | 78092983 | 78092772 | ID=Msa0427420-mRNA-1:exon:20495;Parent=Msa0427420-mRNA-1 |
chr3_2 | exon | 78093470 | 78094481 | 78093470 | ID=Msa0427420-mRNA-1:exon:20496;Parent=Msa0427420-mRNA-1 |
chr3_2 | exon | 78094563 | 78094712 | 78094563 | ID=Msa0427420-mRNA-1:exon:20497;Parent=Msa0427420-mRNA-1 |
chr3_2 | exon | 78095560 | 78095830 | 78095560 | ID=Msa0427420-mRNA-1:exon:20498;Parent=Msa0427420-mRNA-1 |
chr3_2 | exon | 78096225 | 78096335 | 78096225 | ID=Msa0427420-mRNA-1:exon:20499;Parent=Msa0427420-mRNA-1 |
chr3_2 | exon | 78096419 | 78096593 | 78096419 | ID=Msa0427420-mRNA-1:exon:20500;Parent=Msa0427420-mRNA-1 |
chr3_2 | exon | 78096927 | 78097199 | 78096927 | ID=Msa0427420-mRNA-1:exon:20501;Parent=Msa0427420-mRNA-1 |
chr3_2 | exon | 78097288 | 78097482 | 78097288 | ID=Msa0427420-mRNA-1:exon:20502;Parent=Msa0427420-mRNA-1 |
chr3_2 | exon | 78097568 | 78098207 | 78097568 | ID=Msa0427420-mRNA-1:exon:20503;Parent=Msa0427420-mRNA-1 |
chr3_2 | five_prime_UTR | 78092583 | 78092746 | 78092583 | ID=Msa0427420-mRNA-1:five_prime_utr;Parent=Msa0427420-mRNA-1 |
chr3_2 | five_prime_UTR | 78092772 | 78092983 | 78092772 | ID=Msa0427420-mRNA-1:five_prime_utr;Parent=Msa0427420-mRNA-1 |
chr3_2 | five_prime_UTR | 78093470 | 78093515 | 78093470 | ID=Msa0427420-mRNA-1:five_prime_utr;Parent=Msa0427420-mRNA-1 |
chr3_2 | CDS | 78093516 | 78094481 | 78093516 | ID=Msa0427420-mRNA-1:cds;Parent=Msa0427420-mRNA-1 |
chr3_2 | CDS | 78094563 | 78094712 | 78094563 | ID=Msa0427420-mRNA-1:cds;Parent=Msa0427420-mRNA-1 |
chr3_2 | CDS | 78095560 | 78095830 | 78095560 | ID=Msa0427420-mRNA-1:cds;Parent=Msa0427420-mRNA-1 |
chr3_2 | CDS | 78096225 | 78096335 | 78096225 | ID=Msa0427420-mRNA-1:cds;Parent=Msa0427420-mRNA-1 |
chr3_2 | CDS | 78096419 | 78096593 | 78096419 | ID=Msa0427420-mRNA-1:cds;Parent=Msa0427420-mRNA-1 |
chr3_2 | CDS | 78096927 | 78097199 | 78096927 | ID=Msa0427420-mRNA-1:cds;Parent=Msa0427420-mRNA-1 |
chr3_2 | CDS | 78097288 | 78097482 | 78097288 | ID=Msa0427420-mRNA-1:cds;Parent=Msa0427420-mRNA-1 |
chr3_2 | CDS | 78097568 | 78097796 | 78097568 | ID=Msa0427420-mRNA-1:cds;Parent=Msa0427420-mRNA-1 |
chr3_2 | three_prime_UTR | 78097797 | 78098207 | 78097797 | ID=Msa0427420-mRNA-1:three_prime_utr;Parent=Msa0427420-mRNA-1 |
Gene Sequence |
Protein sequence |