Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542500 | XP_013456284.1 | 91.271 | 653 | 31 | 2 | 1 | 634 | 1 | 646 | 0.0 | 1221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542500 | A0A072UWT7 | 91.271 | 653 | 31 | 2 | 1 | 634 | 1 | 646 | 0.0 | 1221 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032960 | Msa0542500 | -0.804875 | 1.751318e-49 | -8.615850e-47 |
| Msa0532070 | Msa0542500 | 0.811312 | 7.457193e-51 | -8.615850e-47 |
| Msa0542500 | Msa0604540 | 0.901377 | 2.849583e-78 | -8.615850e-47 |
| Msa0542500 | Msa0645590 | 0.926493 | 4.348994e-91 | -8.615850e-47 |
| Msa0542500 | Msa0685210 | 0.906439 | 1.482931e-80 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542500 | MtrunA17_Chr4g0033441 | 91.271 | 653 | 31 | 2 | 1 | 634 | 1 | 646 | 0.0 | 1221 |
| Msa0542500 | MtrunA17_Chr2g0329331 | 53.927 | 662 | 266 | 9 | 2 | 630 | 851 | 1506 | 0.0 | 670 |
| Msa0542500 | MtrunA17_Chr2g0329331 | 55.504 | 427 | 125 | 6 | 5 | 369 | 4 | 427 | 2.66e-143 | 452 |
| Msa0542500 | MtrunA17_Chr2g0329331 | 37.143 | 140 | 80 | 3 | 341 | 477 | 717 | 851 | 6.27e-14 | 75.5 |
| Msa0542500 | MtrunA17_Chr2g0329291 | 68.018 | 222 | 69 | 1 | 89 | 310 | 1 | 220 | 5.97e-100 | 307 |
| Msa0542500 | MtrunA17_Chr2g0329301 | 63.600 | 250 | 87 | 2 | 87 | 336 | 3 | 248 | 9.13e-100 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542500 | AT1G05950.1 | 33.333 | 633 | 343 | 16 | 4 | 605 | 13 | 597 | 3.43e-88 | 287 |
| Msa0542500 | AT1G05950.3 | 33.388 | 614 | 330 | 16 | 4 | 586 | 13 | 578 | 7.05e-84 | 275 |
| Msa0542500 | AT1G05950.4 | 32.833 | 600 | 325 | 16 | 4 | 576 | 13 | 561 | 3.52e-76 | 254 |
| Msa0542500 | AT1G05950.2 | 32.833 | 600 | 325 | 16 | 4 | 576 | 13 | 561 | 3.52e-76 | 254 |
| Msa0542500 | AT1G05950.5 | 32.916 | 559 | 302 | 14 | 1 | 534 | 10 | 520 | 2.81e-75 | 251 |
Find 136 sgRNAs with CRISPR-Local
Find 564 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAATCTTGAAGACTTT+GGG | 0.158603 | 4_1:+27602818 | None:intergenic |
| TATACCTGAGACAGTGTTTA+AGG | 0.160936 | 4_1:+27607295 | None:intergenic |
| CTGTTGAGACTTCAGAATTT+TGG | 0.161594 | 4_1:+27605758 | None:intergenic |
| CAGCTATCATTGACAGAAAA+AGG | 0.162964 | 4_1:-27605970 | Msa0542500:CDS |
| GGTTCTGAGGCCACCTTTAT+TGG | 0.191132 | 4_1:-27606049 | Msa0542500:CDS |
| CCTTCTTGCTGTCGATTAAA+AGG | 0.199021 | 4_1:+27605857 | None:intergenic |
| TAACACTGATATTATGCTTT+TGG | 0.222359 | 4_1:-27605198 | Msa0542500:CDS |
| AACTTGCAAAATTCGTTAAA+TGG | 0.228149 | 4_1:+27606078 | None:intergenic |
| CCGACAAATCTTTCCTCTTA+AGG | 0.263512 | 4_1:+27600583 | None:intergenic |
| TTATCTCACAGGGGATTTCT+AGG | 0.264933 | 4_1:-27604444 | Msa0542500:intron |
| TGGCTCTGGCAATGCTATTC+AGG | 0.269758 | 4_1:-27603426 | Msa0542500:intron |
| AAGGACAGAAACTTTCGATA+TGG | 0.276928 | 4_1:+27605876 | None:intergenic |
| GTTGAATAAACTGAGAAGTA+TGG | 0.279829 | 4_1:-27598641 | Msa0542500:CDS |
| ATGGGCCATCCCTCGATATT+AGG | 0.291937 | 4_1:+27605895 | None:intergenic |
| TAACTTATCGTTGTACTCTA+TGG | 0.296874 | 4_1:-27598508 | Msa0542500:three_prime_UTR |
| ATCACCAATGCTATACAATT+TGG | 0.297771 | 4_1:-27603494 | Msa0542500:CDS |
| TGTGAGATAACTTCAGAATA+AGG | 0.310344 | 4_1:+27604457 | None:intergenic |
| GTATAGCATTGGTGATCTTC+TGG | 0.317782 | 4_1:+27603501 | None:intergenic |
| AATGGCAGATATTCTAGTTC+TGG | 0.328231 | 4_1:+27606096 | None:intergenic |
| CGACAAATCTTTCCTCTTAA+GGG | 0.330750 | 4_1:+27600584 | None:intergenic |
| ACCTTTGAACTGAACCTGTT+TGG | 0.338527 | 4_1:+27607323 | None:intergenic |
| GCATAGCTTGCAAGGTCCTT+TGG | 0.341619 | 4_1:-27604539 | Msa0542500:intron |
| TCCAACTGAGGATGCAATTC+AGG | 0.359131 | 4_1:-27606782 | Msa0542500:CDS |
| TCTTTGAATCTTGAAGACTT+TGG | 0.360035 | 4_1:+27602817 | None:intergenic |
| ATTTGTTCACATCCATTTCA+TGG | 0.360457 | 4_1:+27603558 | None:intergenic |
| ATCAATGATAGAATGCATTA+TGG | 0.363892 | 4_1:-27600667 | Msa0542500:CDS |
| TCAGGTGTTTCTACAACATT+TGG | 0.364760 | 4_1:-27606764 | Msa0542500:CDS |
| ATTTCAAACTCTGTCACTTC+AGG | 0.385082 | 4_1:+27603644 | None:intergenic |
| GTATATGTCATGAAAACAAT+TGG | 0.391171 | 4_1:-27599526 | Msa0542500:CDS |
| TGCAAGGTCCTTTGGTCAAA+AGG | 0.391451 | 4_1:-27604531 | Msa0542500:CDS |
| CATGCTTCTGTAGTGGCTCT+TGG | 0.392857 | 4_1:-27598582 | Msa0542500:three_prime_UTR |
| TTTACAAGATTTGAGGGTAG+TGG | 0.401313 | 4_1:-27603690 | Msa0542500:CDS |
| AATTTCATATATGCCAATAA+AGG | 0.402771 | 4_1:+27606036 | None:intergenic |
| TCAAGCTGTATTGCAGTGAT+TGG | 0.404034 | 4_1:-27598449 | Msa0542500:three_prime_UTR |
| CCTTCAGCAGCGCAAGATAG+AGG | 0.405235 | 4_1:-27602114 | Msa0542500:CDS |
| TTGAAACATTGAAGCCAAAC+AGG | 0.406360 | 4_1:-27607337 | Msa0542500:five_prime_UTR |
| TTTATCTTGCAGGATCTAGA+TGG | 0.422322 | 4_1:-27599548 | Msa0542500:intron |
| TAACCTCCTGATTGATTGAC+TGG | 0.422854 | 4_1:+27605108 | None:intergenic |
| TATATGCTTCCAACATTACT+TGG | 0.425020 | 4_1:+27598609 | None:intergenic |
| CAAATTCTGAGAATGTTAAC+TGG | 0.435144 | 4_1:-27602068 | Msa0542500:intron |
| CATATAGTTTACAAGATTTG+AGG | 0.436673 | 4_1:-27603697 | Msa0542500:CDS |
| ACAGCAAGTAATTGCCAAAC+AGG | 0.437795 | 4_1:-27606686 | Msa0542500:intron |
| CTCTATCTTGCGCTGCTGAA+GGG | 0.440040 | 4_1:+27602115 | None:intergenic |
| CCTCTATCTTGCGCTGCTGA+AGG | 0.443269 | 4_1:+27602114 | None:intergenic |
| AATAGCATTGCCAGAGCCAT+TGG | 0.446449 | 4_1:+27603430 | None:intergenic |
| TATCATGGAGACCCATGAAA+TGG | 0.452413 | 4_1:-27603570 | Msa0542500:CDS |
| AAGCAGAAAACACACCTGTT+TGG | 0.458431 | 4_1:+27606672 | None:intergenic |
| CCTTTCAATTACATCCTTGA+GGG | 0.460597 | 4_1:+27605076 | None:intergenic |
| AGGACAGAAACTTTCGATAT+GGG | 0.463069 | 4_1:+27605877 | None:intergenic |
| GGTTGAGAAATATGATAAGT+TGG | 0.466137 | 4_1:+27599497 | None:intergenic |
| TTTCAAACTCTGTCACTTCA+GGG | 0.468554 | 4_1:+27603645 | None:intergenic |
| TATACAATTTGGTGAACATC+AGG | 0.472255 | 4_1:-27603483 | Msa0542500:CDS |
| GACAAATCTTTCCTCTTAAG+GGG | 0.476888 | 4_1:+27600585 | None:intergenic |
| GTTCCATCACTGAGGAGGTA+TGG | 0.478798 | 4_1:-27605813 | Msa0542500:CDS |
| TTGAATAAACTGAGAAGTAT+GGG | 0.480086 | 4_1:-27598640 | Msa0542500:CDS |
| TTCACCAAATTGTATAGCAT+TGG | 0.480139 | 4_1:+27603490 | None:intergenic |
| ACAAGGATGCTCAACGGTAA+AGG | 0.491827 | 4_1:-27602966 | Msa0542500:CDS |
| TATCTTCTCTAATAAGAAAG+AGG | 0.494834 | 4_1:-27602776 | Msa0542500:CDS |
| CAGTTTAAATCCAATGGCTC+TGG | 0.497458 | 4_1:-27603440 | Msa0542500:CDS |
| TTATTCTGAAGTTATCTCAC+AGG | 0.498048 | 4_1:-27604455 | Msa0542500:CDS |
| GTGCTCCCAGTCAATCAATC+AGG | 0.501419 | 4_1:-27605114 | Msa0542500:CDS |
| TTTGAATCTTGAAGACTTTG+GGG | 0.502496 | 4_1:+27602819 | None:intergenic |
| ATATAGTTTACAAGATTTGA+GGG | 0.508018 | 4_1:-27603696 | Msa0542500:CDS |
| TTGGATTTAAACTGCACAGA+TGG | 0.508608 | 4_1:+27603449 | None:intergenic |
| CCTTAAGAGGAAAGATTTGT+CGG | 0.510361 | 4_1:-27600583 | Msa0542500:CDS |
| TATCATATTTCTCAACCAAA+CGG | 0.515785 | 4_1:-27599491 | Msa0542500:intron |
| CAAACCTTAAACACTGTCTC+AGG | 0.517891 | 4_1:-27607299 | Msa0542500:intron |
| TTTGTTCACATCCATTTCAT+GGG | 0.518510 | 4_1:+27603559 | None:intergenic |
| TTCTCTTGCTTCAAGAGGAG+TGG | 0.519482 | 4_1:+27598681 | None:intergenic |
| GTTTATATTAACAGTTACAT+TGG | 0.520185 | 4_1:+27598738 | None:intergenic |
| TCTCTTGCTTCAAGAGGAGT+GGG | 0.522171 | 4_1:+27598682 | None:intergenic |
| CATGAAGTCATGCTGAGAAC+TGG | 0.522441 | 4_1:+27598419 | None:intergenic |
| CCCTCAAGGATGTAATTGAA+AGG | 0.522915 | 4_1:-27605076 | Msa0542500:intron |
| TCAAAAGGAGTTCTAGCAGT+TGG | 0.526233 | 4_1:-27604516 | Msa0542500:CDS |
| GCCAAACAGGTTCAGTTCAA+AGG | 0.526627 | 4_1:-27607324 | Msa0542500:five_prime_UTR |
| GAATATTAACCAAGTAATGT+TGG | 0.531034 | 4_1:-27598618 | Msa0542500:exon |
| TATATGTCATGAAAACAATT+GGG | 0.531779 | 4_1:-27599525 | Msa0542500:CDS |
| GAGTTAGAATGATTTGAACT+TGG | 0.533019 | 4_1:+27602855 | None:intergenic |
| CTATTCTCAAAGCAAAGAAA+AGG | 0.537022 | 4_1:-27605162 | Msa0542500:CDS |
| GAGAAATATGATAAGTTGGT+AGG | 0.544080 | 4_1:+27599501 | None:intergenic |
| AAGTTTAAGTGTTCCGATGA+GGG | 0.544204 | 4_1:-27598715 | Msa0542500:CDS |
| GTAATAAATCAAGAAGGGAC+AGG | 0.545367 | 4_1:-27600624 | Msa0542500:CDS |
| ACCTGAATTGCATCCTCAGT+TGG | 0.546001 | 4_1:+27606781 | None:intergenic |
| TAGACCATGTGATTCTATCA+TGG | 0.549522 | 4_1:-27603585 | Msa0542500:CDS |
| GCTGATTCTCTTGCTTCAAG+AGG | 0.555429 | 4_1:+27598676 | None:intergenic |
| GCAAGTTGATTGTGGTTCTG+AGG | 0.556738 | 4_1:-27606062 | Msa0542500:CDS |
| ACCTTTCAATTACATCCTTG+AGG | 0.562218 | 4_1:+27605075 | None:intergenic |
| AATAAGAAAGAGGAATGAGC+TGG | 0.567307 | 4_1:-27602766 | Msa0542500:intron |
| TACTTGCTGTTGAGAAGCTG+TGG | 0.567536 | 4_1:+27606699 | None:intergenic |
| GGAAGGCTGCAATGATGTAT+CGG | 0.573097 | 4_1:-27600646 | Msa0542500:CDS |
| CTATGAAGATTGACTCGACA+AGG | 0.577961 | 4_1:-27602983 | Msa0542500:CDS |
| CTTCAGCAGCGCAAGATAGA+GGG | 0.579807 | 4_1:-27602113 | Msa0542500:CDS |
| TGTTGTACAACTACTACCAC+AGG | 0.579811 | 4_1:-27606128 | Msa0542500:CDS |
| ACATGGAAGTAAACCACCAC+AGG | 0.580384 | 4_1:+27604484 | None:intergenic |
| CTTCAGAATAAGGAAGCACA+TGG | 0.581249 | 4_1:+27604467 | None:intergenic |
| GGACCATACCTCCTCAGTGA+TGG | 0.581962 | 4_1:+27605810 | None:intergenic |
| TATTCTGAAGTTATCTCACA+GGG | 0.582725 | 4_1:-27604454 | Msa0542500:CDS |
| ATGATAGAATGCATTATGGA+AGG | 0.584757 | 4_1:-27600663 | Msa0542500:CDS |
| GGTTATTAAAGTTCCCCTCA+AGG | 0.585039 | 4_1:-27605090 | Msa0542500:CDS |
| TCTGTGCAGTTTAAATCCAA+TGG | 0.586104 | 4_1:-27603446 | Msa0542500:CDS |
| TTCATATATGCCAATAAAGG+TGG | 0.587022 | 4_1:+27606039 | None:intergenic |
| GTATCGGTAATAAATCAAGA+AGG | 0.589608 | 4_1:-27600630 | Msa0542500:CDS |
| GTTTGGTTCCATCACTGAGG+AGG | 0.590291 | 4_1:-27605818 | Msa0542500:CDS |
| TGACTAATTCGCATTTCACA+TGG | 0.590700 | 4_1:+27598473 | None:intergenic |
| GTTCTGGATGCTGTTTCCTG+TGG | 0.591655 | 4_1:+27606112 | None:intergenic |
| CAAGTTTAAGTGTTCCGATG+AGG | 0.593108 | 4_1:-27598716 | Msa0542500:CDS |
| TCTGCTGTGAAGGAAGCTGC+AGG | 0.595596 | 4_1:-27605640 | Msa0542500:intron |
| CTTTCAATTACATCCTTGAG+GGG | 0.598422 | 4_1:+27605077 | None:intergenic |
| GGGACACAAGTTACCCTCAT+CGG | 0.598530 | 4_1:+27598702 | None:intergenic |
| AAAGAATGTTCCTAATATCG+AGG | 0.599060 | 4_1:-27605905 | Msa0542500:CDS |
| CACTGAGGAGGTATGGTCCG+TGG | 0.602860 | 4_1:-27605806 | Msa0542500:CDS |
| TGAAGTAGAGCTCATAGATG+TGG | 0.603411 | 4_1:-27605998 | Msa0542500:CDS |
| AAGAATGTTCCTAATATCGA+GGG | 0.604182 | 4_1:-27605904 | Msa0542500:CDS |
| AGTCGGGTATTCTGCTGTGA+AGG | 0.608334 | 4_1:-27605650 | Msa0542500:CDS |
| TTGTTAATATTCTACACTAG+AGG | 0.608919 | 4_1:+27598553 | None:intergenic |
| ATAAATGCATGCTTCTGTAG+TGG | 0.609840 | 4_1:-27598589 | Msa0542500:three_prime_UTR |
| TATCGGTAATAAATCAAGAA+GGG | 0.616879 | 4_1:-27600629 | Msa0542500:CDS |
| TTGGACGATCACTCCTGTGG+TGG | 0.625303 | 4_1:-27604497 | Msa0542500:CDS |
| AACCTCCTGATTGATTGACT+GGG | 0.625426 | 4_1:+27605109 | None:intergenic |
| CATGAGCAGAAAGAGAACAA+TGG | 0.627353 | 4_1:-27603620 | Msa0542500:CDS |
| ATAAATCAAGAAGGGACAGG+TGG | 0.630964 | 4_1:-27600621 | Msa0542500:CDS |
| GGAGGCACAAAGTTCATGCA+AGG | 0.632569 | 4_1:-27600562 | Msa0542500:intron |
| ACTTGCTGTTGAGAAGCTGT+GGG | 0.635516 | 4_1:+27606700 | None:intergenic |
| ACAAATCTTTCCTCTTAAGG+GGG | 0.637703 | 4_1:+27600586 | None:intergenic |
| CATTGGATAGAACAAGAACA+TGG | 0.642554 | 4_1:-27606824 | Msa0542500:exon |
| CTCCCAGTCAATCAATCAGG+AGG | 0.644545 | 4_1:-27605111 | Msa0542500:CDS |
| GACTCGACAAGGATGCTCAA+CGG | 0.644800 | 4_1:-27602972 | Msa0542500:CDS |
| ACAATATGTAGAAAACTACA+TGG | 0.650694 | 4_1:-27598534 | Msa0542500:three_prime_UTR |
| GCTGTTTGGTTCCATCACTG+AGG | 0.651655 | 4_1:-27605821 | Msa0542500:CDS |
| ATGTTCCTAATATCGAGGGA+TGG | 0.652051 | 4_1:-27605900 | Msa0542500:CDS |
| AGGATGCTCAACGGTAAAGG+CGG | 0.660364 | 4_1:-27602963 | Msa0542500:CDS |
| CAGTTGGACGATCACTCCTG+TGG | 0.662817 | 4_1:-27604500 | Msa0542500:CDS |
| TAAGAGGAAAGATTTGTCGG+AGG | 0.692718 | 4_1:-27600580 | Msa0542500:CDS |
| ATCAGATGTGTGTCCAACTG+AGG | 0.695565 | 4_1:-27606794 | Msa0542500:CDS |
| GTCTCCATGATAGAATCACA+TGG | 0.715164 | 4_1:+27603581 | None:intergenic |
| ATTCTGAAGTTATCTCACAG+GGG | 0.731508 | 4_1:-27604453 | Msa0542500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTTAAAAAATAAAA+CGG | + | chr4_1:27600884-27600903 | None:intergenic | 0.0% |
| !!! | AAAATAAAATTTTATTCAGA+GGG | + | chr4_1:27600357-27600376 | None:intergenic | 10.0% |
| !!! | TTTTAAAATAATTTTGACAA+AGG | - | chr4_1:27600891-27600910 | Msa0542500:intron | 10.0% |
| !! | ATATTCTTATATGTAAAAAA+TGG | + | chr4_1:27603358-27603377 | None:intergenic | 10.0% |
| !!! | AATTGTTATTTTAAATTTCT+TGG | - | chr4_1:27605315-27605334 | Msa0542500:intron | 10.0% |
| !! | TCAAGTTTAAAAAATATTAT+TGG | - | chr4_1:27606316-27606335 | Msa0542500:intron | 10.0% |
| !! | ATAATAATGTGAATTCTATT+TGG | - | chr4_1:27598580-27598599 | Msa0542500:three_prime_UTR | 15.0% |
| !! | TAATAATGTGAATTCTATTT+GGG | - | chr4_1:27598581-27598600 | Msa0542500:three_prime_UTR | 15.0% |
| !!! | ACTTTTTTTTTCTTTTCATT+TGG | + | chr4_1:27599429-27599448 | None:intergenic | 15.0% |
| !! | ATATATGCTTATTGATATAT+AGG | - | chr4_1:27599481-27599500 | Msa0542500:intron | 15.0% |
| !! | TATATGCTTATTGATATATA+GGG | - | chr4_1:27599482-27599501 | Msa0542500:intron | 15.0% |
| !! | AAACAAAAAATACATACAAA+AGG | - | chr4_1:27599979-27599998 | Msa0542500:intron | 15.0% |
| !!! | TCTTTTCGTAATAATAAAAA+TGG | + | chr4_1:27600103-27600122 | None:intergenic | 15.0% |
| !!! | ATCACTTGTTAAAATAAATT+GGG | + | chr4_1:27600224-27600243 | None:intergenic | 15.0% |
| !!! | GAAAATAAAATTTTATTCAG+AGG | + | chr4_1:27600358-27600377 | None:intergenic | 15.0% |
| !!! | ATTTTAAAAAATAAAACGGA+AGG | + | chr4_1:27600880-27600899 | None:intergenic | 15.0% |
| !!! | ATAAACAAAGTTTTTCAAAA+AGG | + | chr4_1:27601309-27601328 | None:intergenic | 15.0% |
| !!! | ACATTTTTAAATACAAATTG+TGG | - | chr4_1:27601597-27601616 | Msa0542500:intron | 15.0% |
| !!! | CATTTTTAAATACAAATTGT+GGG | - | chr4_1:27601598-27601617 | Msa0542500:intron | 15.0% |
| !! | TTGTCAAAGAAAATATAAAA+TGG | + | chr4_1:27601930-27601949 | None:intergenic | 15.0% |
| !! | ATGAACAATTAGTTATATAT+GGG | + | chr4_1:27603261-27603280 | None:intergenic | 15.0% |
| !! | TATGAACAATTAGTTATATA+TGG | + | chr4_1:27603262-27603281 | None:intergenic | 15.0% |
| !! | TGACTATAATATTCTTATAT+GGG | + | chr4_1:27603410-27603429 | None:intergenic | 15.0% |
| !! | TTGACTATAATATTCTTATA+TGG | + | chr4_1:27603411-27603430 | None:intergenic | 15.0% |
| !! | ATATTATAGTCAATATTCTT+TGG | - | chr4_1:27603418-27603437 | Msa0542500:intron | 15.0% |
| !!! | ATTATATTAACAAAAGCATA+TGG | - | chr4_1:27605890-27605909 | Msa0542500:CDS | 15.0% |
| !!! | AAAACATACTTTAAGAAACA+TGG | + | chr4_1:27598472-27598491 | None:intergenic | 20.0% |
| !!! | TAGTTTTATAACTTGTTTAG+AGG | - | chr4_1:27599147-27599166 | Msa0542500:intron | 20.0% |
| !! | TAGTTACAATTTGTAATGTA+AGG | + | chr4_1:27599215-27599234 | None:intergenic | 20.0% |
| !! | AATTTCATATATGCCAATAA+AGG | + | chr4_1:27599681-27599700 | None:intergenic | 20.0% |
| !! | GTTTGTATTTATGCATAAAT+TGG | - | chr4_1:27600160-27600179 | Msa0542500:intron | 20.0% |
| !!! | CATCACTTGTTAAAATAAAT+TGG | + | chr4_1:27600225-27600244 | None:intergenic | 20.0% |
| !! | ATAATGATACATTAACTAAC+AGG | + | chr4_1:27600419-27600438 | None:intergenic | 20.0% |
| !!! | CAAAGCTTTTTAAATAATTG+AGG | + | chr4_1:27601636-27601655 | None:intergenic | 20.0% |
| !! | CAATTATTTAAAAAGCTTTG+TGG | - | chr4_1:27601636-27601655 | Msa0542500:intron | 20.0% |
| !! | TAGAGAAACATTATGTATAA+TGG | + | chr4_1:27601897-27601916 | None:intergenic | 20.0% |
| !!! | TTGTGTAATATATTTTACCT+TGG | - | chr4_1:27601980-27601999 | Msa0542500:intron | 20.0% |
| !! | ATATAGTTTACAAGATTTGA+GGG | - | chr4_1:27602018-27602037 | Msa0542500:intron | 20.0% |
| !!! | CATTTTTCTTTATTTTGAGA+TGG | + | chr4_1:27602193-27602212 | None:intergenic | 20.0% |
| !!! | ATTTTTCGGATAGATATTAA+GGG | + | chr4_1:27602437-27602456 | None:intergenic | 20.0% |
| !!! | AATTTTTCGGATAGATATTA+AGG | + | chr4_1:27602438-27602457 | None:intergenic | 20.0% |
| !!! | GATCTTTTTAAAGATTTCAA+AGG | - | chr4_1:27602552-27602571 | Msa0542500:intron | 20.0% |
| !! | TAGACTTATTTATATCATTC+AGG | - | chr4_1:27603576-27603595 | Msa0542500:CDS | 20.0% |
| !!! | AACTCAACTATTTTCTTTTT+GGG | - | chr4_1:27603994-27604013 | Msa0542500:intron | 20.0% |
| !!! | TTTGTTTTTCACTCTTTAAT+TGG | + | chr4_1:27604033-27604052 | None:intergenic | 20.0% |
| !! | TTAAAGAATATGAATGTACA+TGG | - | chr4_1:27604786-27604805 | Msa0542500:intron | 20.0% |
| !! | TTTCTTATGACACAATTAAA+GGG | - | chr4_1:27605654-27605673 | Msa0542500:CDS | 20.0% |
| !!! | GAAATTAATTTTAGTTGTCT+GGG | + | chr4_1:27605725-27605744 | None:intergenic | 20.0% |
| !!! | AGAAATTAATTTTAGTTGTC+TGG | + | chr4_1:27605726-27605745 | None:intergenic | 20.0% |
| !!! | TAAAAGATTTTTTTTCTTCG+AGG | - | chr4_1:27605794-27605813 | Msa0542500:CDS | 20.0% |
| !!! | AAAAGATTTTTTTTCTTCGA+GGG | - | chr4_1:27605795-27605814 | Msa0542500:CDS | 20.0% |
| !!! | GACATATTACTTATATTTTG+TGG | - | chr4_1:27605973-27605992 | Msa0542500:CDS | 20.0% |
| !! | AAAATATATATACCCGAAAA+CGG | + | chr4_1:27606017-27606036 | None:intergenic | 20.0% |
| !!! | TTTTCGGGTATATATATTTT+GGG | - | chr4_1:27606017-27606036 | Msa0542500:CDS | 20.0% |
| !!! | GTTGTTTTCAAAAAAGATAA+AGG | + | chr4_1:27606132-27606151 | None:intergenic | 20.0% |
| !! | TATATGTCATGAAAACAATT+GGG | - | chr4_1:27606189-27606208 | Msa0542500:intron | 20.0% |
| !! | ATTAACCACATTTAAATTTG+TGG | - | chr4_1:27606562-27606581 | Msa0542500:intron | 20.0% |
| !! | ATTAACCACAAATTTAAATG+TGG | + | chr4_1:27606570-27606589 | None:intergenic | 20.0% |
| !! | ATAATTAACCACTTATTTGA+CGG | - | chr4_1:27606634-27606653 | Msa0542500:intron | 20.0% |
| !! | TAAAGAATCAGACAAATAAA+AGG | + | chr4_1:27606714-27606733 | None:intergenic | 20.0% |
| !! | TTAAGTATCTTAAGGTAAAT+AGG | + | chr4_1:27606869-27606888 | None:intergenic | 20.0% |
| !!! | TAGACATTTTAAGTATCTTA+AGG | + | chr4_1:27606877-27606896 | None:intergenic | 20.0% |
| !! | GTTTATATTAACAGTTACAT+TGG | + | chr4_1:27606979-27606998 | None:intergenic | 20.0% |
| !! | ATTCCTAGAAAAAATTAACT+TGG | - | chr4_1:27607337-27607356 | Msa0542500:five_prime_UTR | 20.0% |
| !!! | ATACCAAGTTAATTTTTTCT+AGG | + | chr4_1:27607343-27607362 | None:intergenic | 20.0% |
| !! | ACAATTTGTGCATTTTTCTA+TGG | - | chr4_1:27598708-27598727 | Msa0542500:CDS | 25.0% |
| !!! | TTTGATGTGTGTGTTTTATT+GGG | - | chr4_1:27598815-27598834 | Msa0542500:intron | 25.0% |
| !!! | TTTTAGGTTTTCAGAATCAT+TGG | - | chr4_1:27598873-27598892 | Msa0542500:intron | 25.0% |
| !! | AGGATTGTTTGAAATGTTTA+GGG | - | chr4_1:27599167-27599186 | Msa0542500:intron | 25.0% |
| !!! | ACAACATTTGATTAAGTTGA+TGG | - | chr4_1:27599375-27599394 | Msa0542500:intron | 25.0% |
| !!! | TTTTCATTTGGTGATGATAA+TGG | + | chr4_1:27599417-27599436 | None:intergenic | 25.0% |
| ! | AACTTGCAAAATTCGTTAAA+TGG | + | chr4_1:27599639-27599658 | None:intergenic | 25.0% |
| ! | CTTGTTAAAATAAATTGGGA+AGG | + | chr4_1:27600220-27600239 | None:intergenic | 25.0% |
| ! | AACAATAACCTCAAATAGAT+TGG | + | chr4_1:27600307-27600326 | None:intergenic | 25.0% |
| !! | TAACACTGATATTATGCTTT+TGG | - | chr4_1:27600516-27600535 | Msa0542500:intron | 25.0% |
| !! | AACACTGATATTATGCTTTT+GGG | - | chr4_1:27600517-27600536 | Msa0542500:intron | 25.0% |
| !!! | AATTGTTATCGTTTTGCTAT+TGG | - | chr4_1:27600669-27600688 | Msa0542500:CDS | 25.0% |
| ! | ATAATAAGATTGCAACATAC+CGG | + | chr4_1:27600940-27600959 | None:intergenic | 25.0% |
| ! | ATGTTGCAATCTTATTATGA+AGG | - | chr4_1:27600942-27600961 | Msa0542500:intron | 25.0% |
| ! | TCAGATTATTCCAAAGTATA+GGG | + | chr4_1:27601078-27601097 | None:intergenic | 25.0% |
| ! | ATCAGATTATTCCAAAGTAT+AGG | + | chr4_1:27601079-27601098 | None:intergenic | 25.0% |
| ! | TGATAATCACAGAAGTAAAA+CGG | - | chr4_1:27601095-27601114 | Msa0542500:intron | 25.0% |
| ! | AAACGGATAGTTAATAAACT+TGG | - | chr4_1:27601112-27601131 | Msa0542500:intron | 25.0% |
| ! | AACTAAAATAGCATCACTTA+TGG | + | chr4_1:27601363-27601382 | None:intergenic | 25.0% |
| !! | GAAGTGCTTATAATTTACAA+CGG | + | chr4_1:27601526-27601545 | None:intergenic | 25.0% |
| !!! | CTTCTAAAATACTGATATCA+TGG | - | chr4_1:27601542-27601561 | Msa0542500:intron | 25.0% |
| ! | GAATCTCTTTAAATACTGTA+GGG | + | chr4_1:27601692-27601711 | None:intergenic | 25.0% |
| ! | AGAATCTCTTTAAATACTGT+AGG | + | chr4_1:27601693-27601712 | None:intergenic | 25.0% |
| !!! | TATGTATAATGGCTTTGATA+CGG | + | chr4_1:27601886-27601905 | None:intergenic | 25.0% |
| ! | CATATAGTTTACAAGATTTG+AGG | - | chr4_1:27602017-27602036 | Msa0542500:intron | 25.0% |
| !! | CAGTCTAAAACTGTTTATAT+AGG | - | chr4_1:27602364-27602383 | Msa0542500:intron | 25.0% |
| !!! | TTTTTCGGATAGATATTAAG+GGG | + | chr4_1:27602436-27602455 | None:intergenic | 25.0% |
| !! | ATCTATCCGAAAAATTCTTT+TGG | - | chr4_1:27602442-27602461 | Msa0542500:intron | 25.0% |
| !! | TGCATACCAAAAGAATTTTT+CGG | + | chr4_1:27602451-27602470 | None:intergenic | 25.0% |
| !! | AAAAATTCTTTTGGTATGCA+TGG | - | chr4_1:27602451-27602470 | Msa0542500:intron | 25.0% |
| ! | TAAATGTTTCGATGAAGTAT+AGG | + | chr4_1:27602492-27602511 | None:intergenic | 25.0% |
| ! | TTACGATGAGATTATAAACA+TGG | + | chr4_1:27602632-27602651 | None:intergenic | 25.0% |
| !!! | TCTTTTTCATATGAGGTATT+TGG | + | chr4_1:27602820-27602839 | None:intergenic | 25.0% |
| !!! | TTTTGTGTCTTTTTCATATG+AGG | + | chr4_1:27602827-27602846 | None:intergenic | 25.0% |
| ! | TCATATGAAAAAGACACAAA+AGG | - | chr4_1:27602826-27602845 | Msa0542500:CDS | 25.0% |
| ! | TATCTTCTCTAATAAGAAAG+AGG | - | chr4_1:27602938-27602957 | Msa0542500:CDS | 25.0% |
| ! | AATACGAATATACTTTGTTG+TGG | - | chr4_1:27603058-27603077 | Msa0542500:intron | 25.0% |
| ! | TCTGTACATTATTGACAAAA+AGG | - | chr4_1:27603138-27603157 | Msa0542500:intron | 25.0% |
| ! | TTACATATAAGAATATCGAG+TGG | - | chr4_1:27603362-27603381 | Msa0542500:intron | 25.0% |
| !!! | GAGTGCAAATATAGTTTTTT+TGG | + | chr4_1:27603552-27603571 | None:intergenic | 25.0% |
| !!! | TTTTTTCCATGAAGAATGTA+TGG | - | chr4_1:27603956-27603975 | Msa0542500:intron | 25.0% |
| !! | TTTTTCCATGAAGAATGTAT+GGG | - | chr4_1:27603957-27603976 | Msa0542500:intron | 25.0% |
| !! | GAACTCAACTATTTTCTTTT+TGG | - | chr4_1:27603993-27604012 | Msa0542500:intron | 25.0% |
| !! | ACTCAACTATTTTCTTTTTG+GGG | - | chr4_1:27603995-27604014 | Msa0542500:intron | 25.0% |
| ! | CATGTCATTAAAATGTTCTT+GGG | + | chr4_1:27604084-27604103 | None:intergenic | 25.0% |
| ! | ACATGTCATTAAAATGTTCT+TGG | + | chr4_1:27604085-27604104 | None:intergenic | 25.0% |
| !! | TTAAAGAGAGTAAAGGTTTT+TGG | - | chr4_1:27604178-27604197 | Msa0542500:intron | 25.0% |
| !! | TGGTAATGACATAATGTAAA+TGG | - | chr4_1:27604673-27604692 | Msa0542500:intron | 25.0% |
| ! | ATTAGATGATATACCTATTG+TGG | - | chr4_1:27604696-27604715 | Msa0542500:intron | 25.0% |
| ! | ATGGTTATTCATCTATAACT+AGG | + | chr4_1:27604975-27604994 | None:intergenic | 25.0% |
| ! | AAGACACAAAATAAACTCAA+TGG | + | chr4_1:27604994-27605013 | None:intergenic | 25.0% |
| ! | ATCAATGATAGAATGCATTA+TGG | - | chr4_1:27605047-27605066 | Msa0542500:intron | 25.0% |
| ! | TATCGGTAATAAATCAAGAA+GGG | - | chr4_1:27605085-27605104 | Msa0542500:CDS | 25.0% |
| ! | TCTGTCATACATCATATATT+AGG | - | chr4_1:27605258-27605277 | Msa0542500:intron | 25.0% |
| ! | CTGTCATACATCATATATTA+GGG | - | chr4_1:27605259-27605278 | Msa0542500:intron | 25.0% |
| ! | ACCTAATTAATAGATGCATA+TGG | - | chr4_1:27605425-27605444 | Msa0542500:intron | 25.0% |
| ! | TCCATATGCATCTATTAATT+AGG | + | chr4_1:27605429-27605448 | None:intergenic | 25.0% |
| ! | TTCAGCTAATAGTGAAAAAA+TGG | + | chr4_1:27605473-27605492 | None:intergenic | 25.0% |
| ! | TGGATTCCAAATAAATTCAT+GGG | + | chr4_1:27605508-27605527 | None:intergenic | 25.0% |
| ! | ATGGATTCCAAATAAATTCA+TGG | + | chr4_1:27605509-27605528 | None:intergenic | 25.0% |
| !! | ACTATTGGTTGAAATTTATG+TGG | + | chr4_1:27605549-27605568 | None:intergenic | 25.0% |
| ! | GATTATTTATCAATGCATCT+AGG | + | chr4_1:27605602-27605621 | None:intergenic | 25.0% |
| ! | GTTTCTTATGACACAATTAA+AGG | - | chr4_1:27605653-27605672 | Msa0542500:CDS | 25.0% |
| ! | TTCTTATGACACAATTAAAG+GGG | - | chr4_1:27605655-27605674 | Msa0542500:CDS | 25.0% |
| ! | TCATAATATCTATCACTCAA+AGG | + | chr4_1:27605772-27605791 | None:intergenic | 25.0% |
| !!! | AAAGATTTTTTTTCTTCGAG+GGG | - | chr4_1:27605796-27605815 | Msa0542500:CDS | 25.0% |
| !! | ATATTAACAAAAGCATATGG+TGG | - | chr4_1:27605893-27605912 | Msa0542500:CDS | 25.0% |
| ! | ATAACAAGAACTATGTTTGA+AGG | + | chr4_1:27605941-27605960 | None:intergenic | 25.0% |
| !!! | GTTTTCGGGTATATATATTT+TGG | - | chr4_1:27606016-27606035 | Msa0542500:CDS | 25.0% |
| !!! | TGTTCTGGCATTTTATTTTA+TGG | + | chr4_1:27606078-27606097 | None:intergenic | 25.0% |
| ! | AAAAAGATAAAGGAGATGAT+TGG | + | chr4_1:27606122-27606141 | None:intergenic | 25.0% |
| ! | GTATATGTCATGAAAACAAT+TGG | - | chr4_1:27606188-27606207 | Msa0542500:intron | 25.0% |
| ! | TATCATATTTCTCAACCAAA+CGG | - | chr4_1:27606223-27606242 | Msa0542500:intron | 25.0% |
| ! | AAGTTTATTGAGAAATCCAA+AGG | - | chr4_1:27606282-27606301 | Msa0542500:intron | 25.0% |
| ! | AAATGTGGTTAATAATTCTC+AGG | + | chr4_1:27606555-27606574 | None:intergenic | 25.0% |
| ! | AATTTGTGGTTAATGACTTT+CGG | - | chr4_1:27606576-27606595 | Msa0542500:intron | 25.0% |
| !! | GGTTAATTATTTTCAGTAGA+TGG | + | chr4_1:27606624-27606643 | None:intergenic | 25.0% |
| !! | TTGATTGATGTTTCTTTTGA+AGG | - | chr4_1:27606942-27606961 | Msa0542500:intron | 25.0% |
| !! | TTGAATAAACTGAGAAGTAT+GGG | - | chr4_1:27607074-27607093 | Msa0542500:intron | 25.0% |
| ! | GAATATTAACCAAGTAATGT+TGG | - | chr4_1:27607096-27607115 | Msa0542500:intron | 25.0% |
| ! | TTGTTAATATTCTACACTAG+AGG | + | chr4_1:27607164-27607183 | None:intergenic | 25.0% |
| ! | ACAATATGTAGAAAACTACA+TGG | - | chr4_1:27607180-27607199 | Msa0542500:intron | 25.0% |
| ! | ACTTTAAGAAACATGGATGT+TGG | + | chr4_1:27598465-27598484 | None:intergenic | 30.0% |
| !! | TTAATTTTGTATTGACCCTC+TGG | - | chr4_1:27598620-27598639 | Msa0542500:exon | 30.0% |
| !! | TTGAGAATGTTGATAGTTTG+TGG | - | chr4_1:27598767-27598786 | Msa0542500:intron | 30.0% |
| ! | CTTTGATGTGTGTGTTTTAT+TGG | - | chr4_1:27598814-27598833 | Msa0542500:intron | 30.0% |
| CTAATTCAAACATTAAGCTG+TGG | - | chr4_1:27599075-27599094 | Msa0542500:intron | 30.0% | |
| ! | GAGGATTGTTTGAAATGTTT+AGG | - | chr4_1:27599166-27599185 | Msa0542500:intron | 30.0% |
| ! | AGGGATTTTGTATGCATTTT+AGG | - | chr4_1:27599186-27599205 | Msa0542500:intron | 30.0% |
| !!! | GTTAAATTAGTTTTCCCGAA+TGG | - | chr4_1:27599247-27599266 | Msa0542500:intron | 30.0% |
| TTGATATATAGGGATGTGTT+TGG | - | chr4_1:27599492-27599511 | Msa0542500:CDS | 30.0% | |
| !!! | TTTTCTGTTTTTGACGTTGT+CGG | - | chr4_1:27599540-27599559 | Msa0542500:intron | 30.0% |
| TTCATATATGCCAATAAAGG+TGG | + | chr4_1:27599678-27599697 | None:intergenic | 30.0% | |
| AGCTATCATTGACAGAAAAA+GGG | - | chr4_1:27599745-27599764 | Msa0542500:intron | 30.0% | |
| ATTGACAGAAAAAGGGATTA+TGG | - | chr4_1:27599752-27599771 | Msa0542500:intron | 30.0% | |
| AAAGAATGTTCCTAATATCG+AGG | - | chr4_1:27599809-27599828 | Msa0542500:intron | 30.0% | |
| AAGAATGTTCCTAATATCGA+GGG | - | chr4_1:27599810-27599829 | Msa0542500:intron | 30.0% | |
| !!! | GTCTATACTTTTTTCAACCA+CGG | + | chr4_1:27599928-27599947 | None:intergenic | 30.0% |
| ! | ACTTTTACTTCATCTTTTGC+AGG | + | chr4_1:27600023-27600042 | None:intergenic | 30.0% |
| AAATTGGCATCACAGATTAA+AGG | - | chr4_1:27600176-27600195 | Msa0542500:intron | 30.0% | |
| GTTAAAATAAATTGGGAAGG+TGG | + | chr4_1:27600217-27600236 | None:intergenic | 30.0% | |
| ATTCGTCATGATGAATACAT+AGG | - | chr4_1:27600272-27600291 | Msa0542500:intron | 30.0% | |
| TTCGTCATGATGAATACATA+GGG | - | chr4_1:27600273-27600292 | Msa0542500:intron | 30.0% | |
| TTTCTGTTCCAATCTATTTG+AGG | - | chr4_1:27600296-27600315 | Msa0542500:intron | 30.0% | |
| ! | AATTTTATTCAGAGGGAAGA+AGG | + | chr4_1:27600350-27600369 | None:intergenic | 30.0% |
| !!! | CTGAATTTTAGCTTTGACAA+AGG | - | chr4_1:27600441-27600460 | Msa0542500:intron | 30.0% |
| CTATTCTCAAAGCAAAGAAA+AGG | - | chr4_1:27600552-27600571 | Msa0542500:intron | 30.0% | |
| TATCTTATCAATGGGAAAAC+TGG | + | chr4_1:27600735-27600754 | None:intergenic | 30.0% | |
| TTCCCATTGATAAGATAATG+AGG | - | chr4_1:27600738-27600757 | Msa0542500:intron | 30.0% | |
| CATATCAAAAAAGATTCCAC+TGG | + | chr4_1:27600783-27600802 | None:intergenic | 30.0% | |
| GAATAGACATGATTATTAGC+CGG | - | chr4_1:27600918-27600937 | Msa0542500:intron | 30.0% | |
| AATGATGTCTCCTGTAATTA+GGG | - | chr4_1:27600987-27601006 | Msa0542500:intron | 30.0% | |
| TGAAATTTGTCCCTATACTT+TGG | - | chr4_1:27601065-27601084 | Msa0542500:intron | 30.0% | |
| TGTGAGATAACTTCAGAATA+AGG | + | chr4_1:27601260-27601279 | None:intergenic | 30.0% | |
| !! | TTATTCTGAAGTTATCTCAC+AGG | - | chr4_1:27601259-27601278 | Msa0542500:intron | 30.0% |
| !! | TATTCTGAAGTTATCTCACA+GGG | - | chr4_1:27601260-27601279 | Msa0542500:intron | 30.0% |
| GTAATCGTTGTCACTAAAAT+TGG | + | chr4_1:27601496-27601515 | None:intergenic | 30.0% | |
| TTTAAATACTGTAGGGACTA+GGG | + | chr4_1:27601685-27601704 | None:intergenic | 30.0% | |
| TAAAGCAAGGTTAATGTATG+AGG | - | chr4_1:27601758-27601777 | Msa0542500:intron | 30.0% | |
| !! | ATGAGAATTTATTTCTGCCA+AGG | + | chr4_1:27602000-27602019 | None:intergenic | 30.0% |
| !! | GGTAGTGGAGAAAAATATAA+TGG | - | chr4_1:27602039-27602058 | Msa0542500:intron | 30.0% |
| TTTGTTCACATCCATTTCAT+GGG | + | chr4_1:27602158-27602177 | None:intergenic | 30.0% | |
| ATTTGTTCACATCCATTTCA+TGG | + | chr4_1:27602159-27602178 | None:intergenic | 30.0% | |
| ATCACCAATGCTATACAATT+TGG | - | chr4_1:27602220-27602239 | Msa0542500:intron | 30.0% | |
| TTCACCAAATTGTATAGCAT+TGG | + | chr4_1:27602227-27602246 | None:intergenic | 30.0% | |
| ! | TATACAATTTGGTGAACATC+AGG | - | chr4_1:27602231-27602250 | Msa0542500:intron | 30.0% |
| GACTATTTGTAGAAAGTAGT+AGG | - | chr4_1:27602316-27602335 | Msa0542500:intron | 30.0% | |
| ACCCAAAAAATTTATAACGC+TGG | - | chr4_1:27602405-27602424 | Msa0542500:intron | 30.0% | |
| !!! | CCCAGCGTTATAAATTTTTT+GGG | + | chr4_1:27602409-27602428 | None:intergenic | 30.0% |
| CCCAAAAAATTTATAACGCT+GGG | - | chr4_1:27602406-27602425 | Msa0542500:intron | 30.0% | |
| !!! | ACCCAGCGTTATAAATTTTT+TGG | + | chr4_1:27602410-27602429 | None:intergenic | 30.0% |
| ! | TTTTCGGATAGATATTAAGG+GGG | + | chr4_1:27602435-27602454 | None:intergenic | 30.0% |
| GAGTTAGAATGATTTGAACT+TGG | + | chr4_1:27602862-27602881 | None:intergenic | 30.0% | |
| TTTGAATCTTGAAGACTTTG+GGG | + | chr4_1:27602898-27602917 | None:intergenic | 30.0% | |
| CTTTGAATCTTGAAGACTTT+GGG | + | chr4_1:27602899-27602918 | None:intergenic | 30.0% | |
| TCTTTGAATCTTGAAGACTT+TGG | + | chr4_1:27602900-27602919 | None:intergenic | 30.0% | |
| AATAGAGAAAATAGAGTGAC+AGG | - | chr4_1:27603109-27603128 | Msa0542500:intron | 30.0% | |
| ATAGAGAAAATAGAGTGACA+GGG | - | chr4_1:27603110-27603129 | Msa0542500:intron | 30.0% | |
| !! | CTAAGAGGTATTCATTCATT+TGG | + | chr4_1:27603223-27603242 | None:intergenic | 30.0% |
| CTTACACATGTCAGAATAAA+AGG | + | chr4_1:27603329-27603348 | None:intergenic | 30.0% | |
| ! | CAAATTCTGAGAATGTTAAC+TGG | - | chr4_1:27603646-27603665 | Msa0542500:CDS | 30.0% |
| ACTCCAAGAAACACAATAAA+GGG | + | chr4_1:27603742-27603761 | None:intergenic | 30.0% | |
| !!! | CTAGTTTTAATTGTGAACCA+GGG | + | chr4_1:27603875-27603894 | None:intergenic | 30.0% |
| !!! | ACTAGTTTTAATTGTGAACC+AGG | + | chr4_1:27603876-27603895 | None:intergenic | 30.0% |
| ! | TATGATTCTGTGGTGTTAAT+TGG | - | chr4_1:27603898-27603917 | Msa0542500:intron | 30.0% |
| ATGGAAAAAAAGAAGCAAAG+TGG | + | chr4_1:27603946-27603965 | None:intergenic | 30.0% | |
| ! | TTTTCCATGAAGAATGTATG+GGG | - | chr4_1:27603958-27603977 | Msa0542500:intron | 30.0% |
| ! | CTCAACTATTTTCTTTTTGG+GGG | - | chr4_1:27603996-27604015 | Msa0542500:intron | 30.0% |
| !! | TATTTTCTTTTTGGGGGATA+TGG | - | chr4_1:27604002-27604021 | Msa0542500:intron | 30.0% |
| ACATGTGATGAAATGACTAA+AGG | - | chr4_1:27604099-27604118 | Msa0542500:intron | 30.0% | |
| CATGTGATGAAATGACTAAA+GGG | - | chr4_1:27604100-27604119 | Msa0542500:intron | 30.0% | |
| ! | GATAGTTTATGCTAGTTCTT+AGG | - | chr4_1:27604348-27604367 | Msa0542500:intron | 30.0% |
| !! | GGAACGGATTAGTAAAAAAA+GGG | - | chr4_1:27604383-27604402 | Msa0542500:intron | 30.0% |
| !! | GAACGGATTAGTAAAAAAAG+GGG | - | chr4_1:27604384-27604403 | Msa0542500:intron | 30.0% |
| ! | ATCTAGAATCTTGCTAAAGT+AGG | - | chr4_1:27604416-27604435 | Msa0542500:intron | 30.0% |
| ! | TCTAGAATCTTGCTAAAGTA+GGG | - | chr4_1:27604417-27604436 | Msa0542500:intron | 30.0% |
| CAGAACAAGATATCAATGAA+AGG | - | chr4_1:27604504-27604523 | Msa0542500:CDS | 30.0% | |
| ATCTGAAGAGAAAATTGAAG+AGG | - | chr4_1:27604642-27604661 | Msa0542500:intron | 30.0% | |
| AAATTGAAGAGGATGAGAAA+TGG | - | chr4_1:27604653-27604672 | Msa0542500:intron | 30.0% | |
| AACCTAGCAAAAATTACCTT+TGG | - | chr4_1:27604825-27604844 | Msa0542500:intron | 30.0% | |
| ! | TACCAAAGGTAATTTTTGCT+AGG | + | chr4_1:27604830-27604849 | None:intergenic | 30.0% |
| ACAAACAGTTGTCATTAGTT+TGG | + | chr4_1:27604900-27604919 | None:intergenic | 30.0% | |
| ATGATAGAATGCATTATGGA+AGG | - | chr4_1:27605051-27605070 | Msa0542500:intron | 30.0% | |
| ! | GTATCGGTAATAAATCAAGA+AGG | - | chr4_1:27605084-27605103 | Msa0542500:CDS | 30.0% |
| TGCAAAAATTAGCAAGTAAG+TGG | + | chr4_1:27605187-27605206 | None:intergenic | 30.0% | |
| ! | TTTTATGACTAAACTGAACC+TGG | - | chr4_1:27605215-27605234 | Msa0542500:intron | 30.0% |
| TACATCATATATTAGGGCTA+TGG | - | chr4_1:27605265-27605284 | Msa0542500:intron | 30.0% | |
| AGCTAATAGTGAAAAAATGG+TGG | + | chr4_1:27605470-27605489 | None:intergenic | 30.0% | |
| TTGAGTCCCATGAATTTATT+TGG | - | chr4_1:27605499-27605518 | Msa0542500:intron | 30.0% | |
| TTATGTGGATCACACTATTT+CGG | + | chr4_1:27605534-27605553 | None:intergenic | 30.0% | |
| ! | ATTTTCTTTGTTAAACAGCC+CGG | + | chr4_1:27605822-27605841 | None:intergenic | 30.0% |
| CATTTGCAAAGATAAAACCA+AGG | + | chr4_1:27605869-27605888 | None:intergenic | 30.0% | |
| !! | GGGTATATATATTTTGGGAA+TGG | - | chr4_1:27606022-27606041 | Msa0542500:CDS | 30.0% |
| !! | GAGAAATATGATAAGTTGGT+AGG | + | chr4_1:27606216-27606235 | None:intergenic | 30.0% |
| GGTTGAGAAATATGATAAGT+TGG | + | chr4_1:27606220-27606239 | None:intergenic | 30.0% | |
| GTCTAGTTACTAGATTGTTA+AGG | - | chr4_1:27606253-27606272 | Msa0542500:intron | 30.0% | |
| CTTGACAAATTTGTATCCTT+TGG | + | chr4_1:27606301-27606320 | None:intergenic | 30.0% | |
| CAAAACATACAGTTAGTGTA+AGG | - | chr4_1:27606414-27606433 | Msa0542500:intron | 30.0% | |
| TGTGATTAATCACAATCTTC+AGG | - | chr4_1:27606504-27606523 | Msa0542500:intron | 30.0% | |
| GTGATTAATCACAATCTTCA+GGG | - | chr4_1:27606505-27606524 | Msa0542500:intron | 30.0% | |
| ! | TATTTTCAGTAGATGGTTAG+TGG | + | chr4_1:27606617-27606636 | None:intergenic | 30.0% |
| ! | TTTTTGTACCGTCAAATAAG+TGG | + | chr4_1:27606645-27606664 | None:intergenic | 30.0% |
| !!! | CTACACGTTTGATGATTTTT+TGG | + | chr4_1:27606679-27606698 | None:intergenic | 30.0% |
| !! | ATTGATGTTTCTTTTGAAGG+TGG | - | chr4_1:27606945-27606964 | Msa0542500:intron | 30.0% |
| GTTGAATAAACTGAGAAGTA+TGG | - | chr4_1:27607073-27607092 | Msa0542500:intron | 30.0% | |
| TATATGCTTCCAACATTACT+TGG | + | chr4_1:27607108-27607127 | None:intergenic | 30.0% | |
| TAACTTATCGTTGTACTCTA+TGG | - | chr4_1:27607206-27607225 | Msa0542500:intron | 30.0% | |
| TTGAAACATTGAAGCCAAAC+AGG | - | chr4_1:27598377-27598396 | Msa0542500:three_prime_UTR | 35.0% | |
| TATACCTGAGACAGTGTTTA+AGG | + | chr4_1:27598422-27598441 | None:intergenic | 35.0% | |
| GGTCAATAATTGTTTCAGTC+AGG | - | chr4_1:27598680-27598699 | Msa0542500:CDS | 35.0% | |
| AAGTACACATGCATGAAAGA+GGG | + | chr4_1:27598797-27598816 | None:intergenic | 35.0% | |
| AAAGTACACATGCATGAAAG+AGG | + | chr4_1:27598798-27598817 | None:intergenic | 35.0% | |
| ! | ATTGGGTTTTTGTGTGTATG+TGG | - | chr4_1:27598832-27598851 | Msa0542500:intron | 35.0% |
| ATGTGGAAATTGATACCAGA+AGG | - | chr4_1:27598849-27598868 | Msa0542500:intron | 35.0% | |
| TGTGGAAATTGATACCAGAA+GGG | - | chr4_1:27598850-27598869 | Msa0542500:intron | 35.0% | |
| ! | ATTGATACCAGAAGGGTTTT+AGG | - | chr4_1:27598857-27598876 | Msa0542500:intron | 35.0% |
| CATTGGATAGAACAAGAACA+TGG | - | chr4_1:27598890-27598909 | Msa0542500:intron | 35.0% | |
| ! | TCAGGTGTTTCTACAACATT+TGG | - | chr4_1:27598950-27598969 | Msa0542500:intron | 35.0% |
| TGTTGTACAGTTTCTCTGTT+TGG | - | chr4_1:27599123-27599142 | Msa0542500:intron | 35.0% | |
| TTTAAACAACCTTCGATCTG+CGG | - | chr4_1:27599307-27599326 | Msa0542500:intron | 35.0% | |
| TATTATTAACCGCAGATCGA+AGG | + | chr4_1:27599319-27599338 | None:intergenic | 35.0% | |
| TTTGACATACTTAGCTCAAG+AGG | - | chr4_1:27599339-27599358 | Msa0542500:intron | 35.0% | |
| !!! | TTTTGACGTTGTCGGTTTTT+AGG | - | chr4_1:27599548-27599567 | Msa0542500:intron | 35.0% |
| !! | AATGGCAGATATTCTAGTTC+TGG | + | chr4_1:27599621-27599640 | None:intergenic | 35.0% |
| !!! | CGAATTTTGCAAGTTGATTG+TGG | - | chr4_1:27599644-27599663 | Msa0542500:intron | 35.0% |
| CAGCTATCATTGACAGAAAA+AGG | - | chr4_1:27599744-27599763 | Msa0542500:intron | 35.0% | |
| AGGACAGAAACTTTCGATAT+GGG | + | chr4_1:27599840-27599859 | None:intergenic | 35.0% | |
| AAGGACAGAAACTTTCGATA+TGG | + | chr4_1:27599841-27599860 | None:intergenic | 35.0% | |
| ! | CTGTTGAGACTTCAGAATTT+TGG | + | chr4_1:27599959-27599978 | None:intergenic | 35.0% |
| ! | GAAGATAGACTTTTGCAAGT+CGG | - | chr4_1:27600047-27600066 | Msa0542500:intron | 35.0% |
| ! | AAGATAGACTTTTGCAAGTC+GGG | - | chr4_1:27600048-27600067 | Msa0542500:intron | 35.0% |
| TTATTACGAAAAGATCGCAG+TGG | - | chr4_1:27600109-27600128 | Msa0542500:intron | 35.0% | |
| ! | AGTGATGATGTCAATCACAA+AGG | - | chr4_1:27600238-27600257 | Msa0542500:intron | 35.0% |
| ! | AGCTGATGATTTGTGTACTA+TGG | - | chr4_1:27600481-27600500 | Msa0542500:intron | 35.0% |
| ! | TGATTTGTGTACTATGGTAC+AGG | - | chr4_1:27600487-27600506 | Msa0542500:intron | 35.0% |
| CTTTCAATTACATCCTTGAG+GGG | + | chr4_1:27600640-27600659 | None:intergenic | 35.0% | |
| CCTTTCAATTACATCCTTGA+GGG | + | chr4_1:27600641-27600660 | None:intergenic | 35.0% | |
| ACCTTTCAATTACATCCTTG+AGG | + | chr4_1:27600642-27600661 | None:intergenic | 35.0% | |
| !!! | TGTTATCGTTTTGCTATTGG+CGG | - | chr4_1:27600672-27600691 | Msa0542500:CDS | 35.0% |
| GGCCTCATTATCTTATCAAT+GGG | + | chr4_1:27600743-27600762 | None:intergenic | 35.0% | |
| AGGCCTCATTATCTTATCAA+TGG | + | chr4_1:27600744-27600763 | None:intergenic | 35.0% | |
| TAGTAGTGAGTGACACATTA+AGG | + | chr4_1:27600823-27600842 | None:intergenic | 35.0% | |
| GAATGATGTCTCCTGTAATT+AGG | - | chr4_1:27600986-27601005 | Msa0542500:intron | 35.0% | |
| ATGTGCATATCCCTAATTAC+AGG | + | chr4_1:27601000-27601019 | None:intergenic | 35.0% | |
| AACAACCAACAAATACACCA+AGG | + | chr4_1:27601031-27601050 | None:intergenic | 35.0% | |
| ! | TGGTGTATTTGTTGGTTGTT+TGG | - | chr4_1:27601031-27601050 | Msa0542500:intron | 35.0% |
| !!! | CTTTTTTTGCATAGCTTGCA+AGG | - | chr4_1:27601167-27601186 | Msa0542500:intron | 35.0% |
| !! | ATTCTGAAGTTATCTCACAG+GGG | - | chr4_1:27601261-27601280 | Msa0542500:intron | 35.0% |
| TGAGCAAACTACTGCTAAAT+TGG | + | chr4_1:27601333-27601352 | None:intergenic | 35.0% | |
| TTGACTGAAGCTCTTAAGTT+TGG | - | chr4_1:27601413-27601432 | Msa0542500:intron | 35.0% | |
| CTTTAAATACTGTAGGGACT+AGG | + | chr4_1:27601686-27601705 | None:intergenic | 35.0% | |
| ATGAGGATCCTAAATACTGT+TGG | - | chr4_1:27601775-27601794 | Msa0542500:intron | 35.0% | |
| GCTTTGATACGGACAATAAA+TGG | + | chr4_1:27601875-27601894 | None:intergenic | 35.0% | |
| ACTGTTTGTGTGATACATTG+TGG | - | chr4_1:27601949-27601968 | Msa0542500:intron | 35.0% | |
| TTTACAAGATTTGAGGGTAG+TGG | - | chr4_1:27602024-27602043 | Msa0542500:intron | 35.0% | |
| ! | TTTCAAACTCTGTCACTTCA+GGG | + | chr4_1:27602072-27602091 | None:intergenic | 35.0% |
| ! | ATTTCAAACTCTGTCACTTC+AGG | + | chr4_1:27602073-27602092 | None:intergenic | 35.0% |
| TAGACCATGTGATTCTATCA+TGG | - | chr4_1:27602129-27602148 | Msa0542500:intron | 35.0% | |
| TTGGATTTAAACTGCACAGA+TGG | + | chr4_1:27602268-27602287 | None:intergenic | 35.0% | |
| TCTGTGCAGTTTAAATCCAA+TGG | - | chr4_1:27602268-27602287 | Msa0542500:intron | 35.0% | |
| !! | ACAAATGACTCAAGCATTGA+GGG | + | chr4_1:27602676-27602695 | None:intergenic | 35.0% |
| ! | AACAAATGACTCAAGCATTG+AGG | + | chr4_1:27602677-27602696 | None:intergenic | 35.0% |
| AATAAGAAAGAGGAATGAGC+TGG | - | chr4_1:27602948-27602967 | Msa0542500:CDS | 35.0% | |
| TTGACAAAAAGGTGATGAAC+AGG | - | chr4_1:27603149-27603168 | Msa0542500:intron | 35.0% | |
| TGACAAAAAGGTGATGAACA+GGG | - | chr4_1:27603150-27603169 | Msa0542500:intron | 35.0% | |
| TGAATACCTCTTAGTTACAG+TGG | - | chr4_1:27603229-27603248 | Msa0542500:intron | 35.0% | |
| ! | GAGTTGGTTGAGTTAGTTAT+TGG | + | chr4_1:27603307-27603326 | None:intergenic | 35.0% |
| CATGTCAGAATAAAAGGAGT+TGG | + | chr4_1:27603323-27603342 | None:intergenic | 35.0% | |
| AAAGCAGAATACTACTGTCA+TGG | + | chr4_1:27603445-27603464 | None:intergenic | 35.0% | |
| AAACAAAGAACACCAGTGTA+AGG | + | chr4_1:27603680-27603699 | None:intergenic | 35.0% | |
| !!! | TGTTCTTTGTTTTGCTTCCT+GGG | - | chr4_1:27603688-27603707 | Msa0542500:CDS | 35.0% |
| ACTGATAGAATAATGAACCC+AGG | + | chr4_1:27603708-27603727 | None:intergenic | 35.0% | |
| TCTCCCTTTATTGTGTTTCT+TGG | - | chr4_1:27603736-27603755 | Msa0542500:intron | 35.0% | |
| CACTCCAAGAAACACAATAA+AGG | + | chr4_1:27603743-27603762 | None:intergenic | 35.0% | |
| AAACTAGTCGTATGATTCTG+TGG | - | chr4_1:27603888-27603907 | Msa0542500:intron | 35.0% | |
| ! | TTCTGTGGTGTTAATTGGTA+AGG | - | chr4_1:27603903-27603922 | Msa0542500:intron | 35.0% |
| ACAAATGTTCTTTGAGCGTA+AGG | - | chr4_1:27604048-27604067 | Msa0542500:intron | 35.0% | |
| ! | CTTTGGGTTAAAGAGAGTAA+AGG | - | chr4_1:27604171-27604190 | Msa0542500:intron | 35.0% |
| AGTTCTTAGGCACTTAAAAC+AGG | - | chr4_1:27604361-27604380 | Msa0542500:intron | 35.0% | |
| GTTCTTAGGCACTTAAAACA+GGG | - | chr4_1:27604362-27604381 | Msa0542500:intron | 35.0% | |
| !! | GGGAACGGATTAGTAAAAAA+AGG | - | chr4_1:27604382-27604401 | Msa0542500:intron | 35.0% |
| TAGACTTAACATGAGTGATG+AGG | - | chr4_1:27604585-27604604 | Msa0542500:intron | 35.0% | |
| ATACCTATTGTGGTATGCAA+AGG | - | chr4_1:27604706-27604725 | Msa0542500:intron | 35.0% | |
| TACCTATTGTGGTATGCAAA+GGG | - | chr4_1:27604707-27604726 | Msa0542500:intron | 35.0% | |
| !! | TTTTGCTAGGTTCTAGCAAA+TGG | + | chr4_1:27604817-27604836 | None:intergenic | 35.0% |
| AGGGAAAAAGAAGAGGAAAA+GGG | + | chr4_1:27604867-27604886 | None:intergenic | 35.0% | |
| CTAGGACAAAGAGTAAATGT+AGG | + | chr4_1:27604957-27604976 | None:intergenic | 35.0% | |
| TCTTGTTGATACACGTAGAT+GGG | - | chr4_1:27605010-27605029 | Msa0542500:intron | 35.0% | |
| GTAATAAATCAAGAAGGGAC+AGG | - | chr4_1:27605090-27605109 | Msa0542500:CDS | 35.0% | |
| ACAAATCTTTCCTCTTAAGG+GGG | + | chr4_1:27605131-27605150 | None:intergenic | 35.0% | |
| GACAAATCTTTCCTCTTAAG+GGG | + | chr4_1:27605132-27605151 | None:intergenic | 35.0% | |
| CGACAAATCTTTCCTCTTAA+GGG | + | chr4_1:27605133-27605152 | None:intergenic | 35.0% | |
| CCTTAAGAGGAAAGATTTGT+CGG | - | chr4_1:27605131-27605150 | Msa0542500:CDS | 35.0% | |
| !!! | CTGTATAGTTTTGTTCACAC+AGG | - | chr4_1:27605288-27605307 | Msa0542500:intron | 35.0% |
| ! | AAAAATGGTGGAAAGAGTGT+TGG | + | chr4_1:27605458-27605477 | None:intergenic | 35.0% |
| ATGTCAAGTAAGTCATGTTC+TGG | + | chr4_1:27606093-27606112 | None:intergenic | 35.0% | |
| TCTAGATCCTGCAAGATAAA+GGG | + | chr4_1:27606166-27606185 | None:intergenic | 35.0% | |
| ATCTAGATCCTGCAAGATAA+AGG | + | chr4_1:27606167-27606186 | None:intergenic | 35.0% | |
| TTTATCTTGCAGGATCTAGA+TGG | - | chr4_1:27606166-27606185 | Msa0542500:intron | 35.0% | |
| ! | TTTTGCTGCAATAAACTGAG+TGG | - | chr4_1:27606380-27606399 | Msa0542500:intron | 35.0% |
| AATAAACTGAGTGGTTAACG+CGG | - | chr4_1:27606389-27606408 | Msa0542500:intron | 35.0% | |
| ATACAGTTAGTGTAAGGTTG+AGG | - | chr4_1:27606420-27606439 | Msa0542500:intron | 35.0% | |
| GTAAGGTTGAGGAATATACT+AGG | - | chr4_1:27606431-27606450 | Msa0542500:intron | 35.0% | |
| AACTTCATTAACCACGAACT+TGG | - | chr4_1:27606480-27606499 | Msa0542500:intron | 35.0% | |
| ATTAATCACATCCAAGTTCG+TGG | + | chr4_1:27606494-27606513 | None:intergenic | 35.0% | |
| AAGTTTAAGTGTTCCGATGA+GGG | - | chr4_1:27606999-27607018 | Msa0542500:intron | 35.0% | |
| ATAAATGCATGCTTCTGTAG+TGG | - | chr4_1:27607125-27607144 | Msa0542500:intron | 35.0% | |
| TGACTAATTCGCATTTCACA+TGG | + | chr4_1:27607244-27607263 | None:intergenic | 35.0% | |
| ACCTTTGAACTGAACCTGTT+TGG | + | chr4_1:27598394-27598413 | None:intergenic | 40.0% | |
| CAAACCTTAAACACTGTCTC+AGG | - | chr4_1:27598415-27598434 | Msa0542500:three_prime_UTR | 40.0% | |
| CTGAAAACCTAAAACCCTTC+TGG | + | chr4_1:27598867-27598886 | None:intergenic | 40.0% | |
| ATTGCTGCCAGAAAAAGCTT+CGG | - | chr4_1:27598980-27598999 | Msa0542500:intron | 40.0% | |
| ACAGCAAGTAATTGCCAAAC+AGG | - | chr4_1:27599028-27599047 | Msa0542500:intron | 40.0% | |
| AAGCAGAAAACACACCTGTT+TGG | + | chr4_1:27599045-27599064 | None:intergenic | 40.0% | |
| GGTTTATTTGAACGCATTGC+TGG | - | chr4_1:27599096-27599115 | Msa0542500:intron | 40.0% | |
| CGATCAGTTTCATTCCATTC+GGG | + | chr4_1:27599264-27599283 | None:intergenic | 40.0% | |
| CCGATCAGTTTCATTCCATT+CGG | + | chr4_1:27599265-27599284 | None:intergenic | 40.0% | |
| CCGAATGGAATGAAACTGAT+CGG | - | chr4_1:27599262-27599281 | Msa0542500:intron | 40.0% | |
| !! | CATTTGGTGATGATAATGGC+AGG | + | chr4_1:27599413-27599432 | None:intergenic | 40.0% |
| CAGTAACTAACCAGAGAAGA+TGG | + | chr4_1:27599518-27599537 | None:intergenic | 40.0% | |
| TGTTGTACAACTACTACCAC+AGG | - | chr4_1:27599586-27599605 | Msa0542500:intron | 40.0% | |
| TGAAGTAGAGCTCATAGATG+TGG | - | chr4_1:27599716-27599735 | Msa0542500:intron | 40.0% | |
| ATGTTCCTAATATCGAGGGA+TGG | - | chr4_1:27599814-27599833 | Msa0542500:intron | 40.0% | |
| ! | CCTTCTTGCTGTCGATTAAA+AGG | + | chr4_1:27599860-27599879 | None:intergenic | 40.0% |
| ! | CCTTTTAATCGACAGCAAGA+AGG | - | chr4_1:27599857-27599876 | Msa0542500:intron | 40.0% |
| !!! | GAGAACTGCTTTTTGCTGTT+TGG | - | chr4_1:27599879-27599898 | Msa0542500:intron | 40.0% |
| !! | TGAGACTTCAGAATTTTGGC+TGG | + | chr4_1:27599955-27599974 | None:intergenic | 40.0% |
| AACCTCCTGATTGATTGACT+GGG | + | chr4_1:27600608-27600627 | None:intergenic | 40.0% | |
| TAACCTCCTGATTGATTGAC+TGG | + | chr4_1:27600609-27600628 | None:intergenic | 40.0% | |
| GGTTATTAAAGTTCCCCTCA+AGG | - | chr4_1:27600624-27600643 | Msa0542500:CDS | 40.0% | |
| CCCTCAAGGATGTAATTGAA+AGG | - | chr4_1:27600638-27600657 | Msa0542500:CDS | 40.0% | |
| TATGCACATTCTGTGTACCT+TGG | - | chr4_1:27601011-27601030 | Msa0542500:intron | 40.0% | |
| ! | GTGTACCTTGGTGTATTTGT+TGG | - | chr4_1:27601023-27601042 | Msa0542500:intron | 40.0% |
| ! | CTAGAACTCCTTTTGACCAA+AGG | + | chr4_1:27601194-27601213 | None:intergenic | 40.0% |
| ! | TCAAAAGGAGTTCTAGCAGT+TGG | - | chr4_1:27601198-27601217 | Msa0542500:intron | 40.0% |
| ! | CTTCAGAATAAGGAAGCACA+TGG | + | chr4_1:27601250-27601269 | None:intergenic | 40.0% |
| TTATCTCACAGGGGATTTCT+AGG | - | chr4_1:27601270-27601289 | Msa0542500:intron | 40.0% | |
| ACCTGTGAGAACTGAGAATA+AGG | - | chr4_1:27601438-27601457 | Msa0542500:intron | 40.0% | |
| CCTGTGAGAACTGAGAATAA+GGG | - | chr4_1:27601439-27601458 | Msa0542500:intron | 40.0% | |
| CTGTGAGAACTGAGAATAAG+GGG | - | chr4_1:27601440-27601459 | Msa0542500:intron | 40.0% | |
| TACTGATATCATGGCACCTT+TGG | - | chr4_1:27601551-27601570 | Msa0542500:intron | 40.0% | |
| TCAACATAGACTCACACCAA+AGG | + | chr4_1:27601570-27601589 | None:intergenic | 40.0% | |
| ! | GCTTTATAGCTTGCAGTAGA+TGG | + | chr4_1:27601744-27601763 | None:intergenic | 40.0% |
| CTACTGCAAGCTATAAAGCA+AGG | - | chr4_1:27601745-27601764 | Msa0542500:intron | 40.0% | |
| AACAGGGTCCAACAGTATTT+AGG | + | chr4_1:27601786-27601805 | None:intergenic | 40.0% | |
| GCTTGCATGGTTTGAAGAAA+TGG | - | chr4_1:27601836-27601855 | Msa0542500:intron | 40.0% | |
| CATGAGCAGAAAGAGAACAA+TGG | - | chr4_1:27602094-27602113 | Msa0542500:CDS | 40.0% | |
| GTCTCCATGATAGAATCACA+TGG | + | chr4_1:27602136-27602155 | None:intergenic | 40.0% | |
| TATCATGGAGACCCATGAAA+TGG | - | chr4_1:27602144-27602163 | Msa0542500:intron | 40.0% | |
| !! | GTATAGCATTGGTGATCTTC+TGG | + | chr4_1:27602216-27602235 | None:intergenic | 40.0% |
| CAGTTTAAATCCAATGGCTC+TGG | - | chr4_1:27602274-27602293 | Msa0542500:intron | 40.0% | |
| !! | CAAATGACTCAAGCATTGAG+GGG | + | chr4_1:27602675-27602694 | None:intergenic | 40.0% |
| CTGAATGTCATTGCTTTGAC+AGG | - | chr4_1:27602708-27602727 | Msa0542500:intron | 40.0% | |
| !! | CTATGAAGATTGACTCGACA+AGG | - | chr4_1:27602731-27602750 | Msa0542500:intron | 40.0% |
| TACCTCTTAGTTACAGTGGA+TGG | - | chr4_1:27603233-27603252 | Msa0542500:intron | 40.0% | |
| ATCCATCCACTGTAACTAAG+AGG | + | chr4_1:27603238-27603257 | None:intergenic | 40.0% | |
| !!! | GTGTTCTTTGTTTTGCTTCC+TGG | - | chr4_1:27603687-27603706 | Msa0542500:CDS | 40.0% |
| ! | AGCAGATCTGATGCTAGTTT+AGG | - | chr4_1:27603818-27603837 | Msa0542500:intron | 40.0% |
| ! | TCTGATGCTAGTTTAGGCAT+TGG | - | chr4_1:27603824-27603843 | Msa0542500:intron | 40.0% |
| !! | CTAGTTTAGGCATTGGTTAC+TGG | - | chr4_1:27603831-27603850 | Msa0542500:intron | 40.0% |
| TTCTAATATGCACTTTGCCC+TGG | - | chr4_1:27603855-27603874 | Msa0542500:intron | 40.0% | |
| GGTGTTAATTGGTAAGGCAT+TGG | - | chr4_1:27603909-27603928 | Msa0542500:intron | 40.0% | |
| CATGAAGAATGTATGGGGTT+GGG | - | chr4_1:27603963-27603982 | Msa0542500:intron | 40.0% | |
| !! | TTTCTTTTTGGGGGATATGG+TGG | - | chr4_1:27604005-27604024 | Msa0542500:intron | 40.0% |
| AGTATAGCCAAAGCAACACT+AGG | - | chr4_1:27604129-27604148 | Msa0542500:intron | 40.0% | |
| !!! | AGAGTAAAGGTTTTTGGTCG+TGG | - | chr4_1:27604184-27604203 | Msa0542500:intron | 40.0% |
| !!! | GAGTAAAGGTTTTTGGTCGT+GGG | - | chr4_1:27604185-27604204 | Msa0542500:intron | 40.0% |
| !!! | AGTAAAGGTTTTTGGTCGTG+GGG | - | chr4_1:27604186-27604205 | Msa0542500:intron | 40.0% |
| AGCTAAGCAAGACAACAAGA+AGG | - | chr4_1:27604300-27604319 | Msa0542500:intron | 40.0% | |
| TAGGCACTTAAAACAGGGAA+CGG | - | chr4_1:27604367-27604386 | Msa0542500:intron | 40.0% | |
| CAAGAGACTTGAACTAGTTG+AGG | - | chr4_1:27604449-27604468 | Msa0542500:CDS | 40.0% | |
| TTGAACTAGTTGAGGTGCAT+TGG | - | chr4_1:27604457-27604476 | Msa0542500:CDS | 40.0% | |
| AACCCTTTGCATACCACAAT+AGG | + | chr4_1:27604712-27604731 | None:intergenic | 40.0% | |
| ATTGTGGTATGCAAAGGGTT+AGG | - | chr4_1:27604712-27604731 | Msa0542500:intron | 40.0% | |
| AAGAAGAGGAAAAGGGAGTT+GGG | + | chr4_1:27604860-27604879 | None:intergenic | 40.0% | |
| AAAGAAGAGGAAAAGGGAGT+TGG | + | chr4_1:27604861-27604880 | None:intergenic | 40.0% | |
| GAGGGAAAAAGAAGAGGAAA+AGG | + | chr4_1:27604868-27604887 | None:intergenic | 40.0% | |
| !! | TTAGAGAATGGGTTAGTCAG+AGG | + | chr4_1:27604928-27604947 | None:intergenic | 40.0% |
| GTAGGTCTGAGTTAGAGAAT+GGG | + | chr4_1:27604939-27604958 | None:intergenic | 40.0% | |
| TGTAGGTCTGAGTTAGAGAA+TGG | + | chr4_1:27604940-27604959 | None:intergenic | 40.0% | |
| ! | GTCTTGTTGATACACGTAGA+TGG | - | chr4_1:27605009-27605028 | Msa0542500:intron | 40.0% |
| ATAAATCAAGAAGGGACAGG+TGG | - | chr4_1:27605093-27605112 | Msa0542500:CDS | 40.0% | |
| CCGACAAATCTTTCCTCTTA+AGG | + | chr4_1:27605134-27605153 | None:intergenic | 40.0% | |
| TAAGAGGAAAGATTTGTCGG+AGG | - | chr4_1:27605134-27605153 | Msa0542500:CDS | 40.0% | |
| CTAAACTGAACCTGGAAACA+TGG | - | chr4_1:27605223-27605242 | Msa0542500:intron | 40.0% | |
| !! | TTTCTTGGAAGCATTGTTGC+TGG | - | chr4_1:27605330-27605349 | Msa0542500:intron | 40.0% |
| GGATCACACTATTTCGGATA+TGG | + | chr4_1:27605528-27605547 | None:intergenic | 40.0% | |
| ACCAATAGTAGAGATAGTGC+CGG | - | chr4_1:27605560-27605579 | Msa0542500:intron | 40.0% | |
| TAGTTGTCTGGGTGTGAATA+GGG | + | chr4_1:27605714-27605733 | None:intergenic | 40.0% | |
| TTAGTTGTCTGGGTGTGAAT+AGG | + | chr4_1:27605715-27605734 | None:intergenic | 40.0% | |
| TCTGCCGAAGTCTTGAATTA+TGG | - | chr4_1:27605743-27605762 | Msa0542500:CDS | 40.0% | |
| GCCTCCATAATTCAAGACTT+CGG | + | chr4_1:27605750-27605769 | None:intergenic | 40.0% | |
| !!! | ATTTTTTTTCTTCGAGGGGC+CGG | - | chr4_1:27605800-27605819 | Msa0542500:CDS | 40.0% |
| TTCATATATGCATGCGTCCT+TGG | - | chr4_1:27605849-27605868 | Msa0542500:CDS | 40.0% | |
| ACTATGTTTGAAGGCTTGCA+CGG | + | chr4_1:27605932-27605951 | None:intergenic | 40.0% | |
| ! | TTTCCTTGTGTGACCGTTTT+CGG | - | chr4_1:27606001-27606020 | Msa0542500:CDS | 40.0% |
| TAGAACTCCCTTTATCTTGC+AGG | - | chr4_1:27606156-27606175 | Msa0542500:intron | 40.0% | |
| AACTAGACAGTCTTACCGTT+TGG | + | chr4_1:27606241-27606260 | None:intergenic | 40.0% | |
| TTTCAGTAGATGGTTAGTGG+AGG | + | chr4_1:27606614-27606633 | None:intergenic | 40.0% | |
| TGCTGACAGATTCTACATCT+AGG | + | chr4_1:27606738-27606757 | None:intergenic | 40.0% | |
| ! | ATAGGAAGTGCAACGATAAG+TGG | + | chr4_1:27606851-27606870 | None:intergenic | 40.0% |
| CAAGTTTAAGTGTTCCGATG+AGG | - | chr4_1:27606998-27607017 | Msa0542500:intron | 40.0% | |
| TCAAGCTGTATTGCAGTGAT+TGG | - | chr4_1:27607265-27607284 | Msa0542500:intron | 40.0% | |
| GCCAAACAGGTTCAGTTCAA+AGG | - | chr4_1:27598390-27598409 | Msa0542500:three_prime_UTR | 45.0% | |
| ! | TATTGACCCTCTGGTTCCAA+AGG | - | chr4_1:27598629-27598648 | Msa0542500:CDS | 45.0% |
| ! | ATTGACCCTCTGGTTCCAAA+GGG | - | chr4_1:27598630-27598649 | Msa0542500:CDS | 45.0% |
| ! | CCAAAGGGGTTCTGATAATC+CGG | - | chr4_1:27598645-27598664 | Msa0542500:CDS | 45.0% |
| ! | GGTTCTGATAATCCGGAGTT+CGG | - | chr4_1:27598652-27598671 | Msa0542500:CDS | 45.0% |
| ATCAGATGTGTGTCCAACTG+AGG | - | chr4_1:27598920-27598939 | Msa0542500:intron | 45.0% | |
| TCCAACTGAGGATGCAATTC+AGG | - | chr4_1:27598932-27598951 | Msa0542500:intron | 45.0% | |
| ACCTGAATTGCATCCTCAGT+TGG | + | chr4_1:27598936-27598955 | None:intergenic | 45.0% | |
| !! | GAAGCTTTTTCTGGCAGCAA+TGG | + | chr4_1:27598981-27599000 | None:intergenic | 45.0% |
| !! | TCTCGAACCGAAGCTTTTTC+TGG | + | chr4_1:27598990-27599009 | None:intergenic | 45.0% |
| !! | ACTTGCTGTTGAGAAGCTGT+GGG | + | chr4_1:27599017-27599036 | None:intergenic | 45.0% |
| !! | TACTTGCTGTTGAGAAGCTG+TGG | + | chr4_1:27599018-27599037 | None:intergenic | 45.0% |
| ATGTGTTTGGCCATCTTCTC+TGG | - | chr4_1:27599505-27599524 | Msa0542500:CDS | 45.0% | |
| !! | GCAAGTTGATTGTGGTTCTG+AGG | - | chr4_1:27599652-27599671 | Msa0542500:intron | 45.0% |
| !!! | GACTTCAGAATTTTGGCTGG+AGG | + | chr4_1:27599952-27599971 | None:intergenic | 45.0% |
| !! | TTGCTATTGGCGGATTACTC+AGG | - | chr4_1:27600682-27600701 | Msa0542500:CDS | 45.0% |
| ACTCAGGTCTCAAGGATGAA+TGG | - | chr4_1:27600698-27600717 | Msa0542500:intron | 45.0% | |
| TAATGAGGCCTGTTTCCGTA+AGG | - | chr4_1:27600753-27600772 | Msa0542500:intron | 45.0% | |
| GATTCCACTGGAATGCCTTA+CGG | + | chr4_1:27600771-27600790 | None:intergenic | 45.0% | |
| TGCAAGGTCCTTTGGTCAAA+AGG | - | chr4_1:27601183-27601202 | Msa0542500:intron | 45.0% | |
| ACATGGAAGTAAACCACCAC+AGG | + | chr4_1:27601233-27601252 | None:intergenic | 45.0% | |
| CCCTTATTCTCAGTTCTCAC+AGG | + | chr4_1:27601442-27601461 | None:intergenic | 45.0% | |
| AGGGATCAAGGCTTGAAGAT+AGG | + | chr4_1:27601666-27601685 | None:intergenic | 45.0% | |
| CTCGTACAGTCTCACTTGTA+TGG | - | chr4_1:27601807-27601826 | Msa0542500:intron | 45.0% | |
| AATAGCATTGCCAGAGCCAT+TGG | + | chr4_1:27602287-27602306 | None:intergenic | 45.0% | |
| TGGCAATGCTATTCAGGTCT+GGG | - | chr4_1:27602294-27602313 | Msa0542500:intron | 45.0% | |
| ACAAGGATGCTCAACGGTAA+AGG | - | chr4_1:27602748-27602767 | Msa0542500:intron | 45.0% | |
| GAGAAAATAGAGTGACAGGG+TGG | - | chr4_1:27603113-27603132 | Msa0542500:intron | 45.0% | |
| GGAAAGAGCAATAGCTCAGT+CGG | + | chr4_1:27603202-27603221 | None:intergenic | 45.0% | |
| ! | TCACCTATTGACTGCTCTCT+CGG | - | chr4_1:27603467-27603486 | Msa0542500:CDS | 45.0% |
| CTCTCTCGGTCATACATTAC+TGG | - | chr4_1:27603481-27603500 | Msa0542500:CDS | 45.0% | |
| CTGGTATGCTTTCCTTACAC+TGG | - | chr4_1:27603665-27603684 | Msa0542500:CDS | 45.0% | |
| CCAACCCCATACATTCTTCA+TGG | + | chr4_1:27603965-27603984 | None:intergenic | 45.0% | |
| CCATGAAGAATGTATGGGGT+TGG | - | chr4_1:27603962-27603981 | Msa0542500:intron | 45.0% | |
| !! | CACTTCTCCTAGTGTTGCTT+TGG | + | chr4_1:27604139-27604158 | None:intergenic | 45.0% |
| AGCAACACTAGGAGAAGTGA+AGG | - | chr4_1:27604140-27604159 | Msa0542500:intron | 45.0% | |
| GCAACACTAGGAGAAGTGAA+GGG | - | chr4_1:27604141-27604160 | Msa0542500:intron | 45.0% | |
| CAACACTAGGAGAAGTGAAG+GGG | - | chr4_1:27604142-27604161 | Msa0542500:intron | 45.0% | |
| AAGTGAAGGGGTTTCAGCTT+TGG | - | chr4_1:27604154-27604173 | Msa0542500:intron | 45.0% | |
| AGTGAAGGGGTTTCAGCTTT+GGG | - | chr4_1:27604155-27604174 | Msa0542500:intron | 45.0% | |
| !! | AGGTGCATTGGTGACGAAAA+GGG | - | chr4_1:27604469-27604488 | Msa0542500:CDS | 45.0% |
| CAGTTGGAGGGAAAAAGAAG+AGG | + | chr4_1:27604874-27604893 | None:intergenic | 45.0% | |
| ! | TTAGTTTGGTCGCAGTTGGA+GGG | + | chr4_1:27604886-27604905 | None:intergenic | 45.0% |
| ! | ATTAGTTTGGTCGCAGTTGG+AGG | + | chr4_1:27604887-27604906 | None:intergenic | 45.0% |
| ! | GTCATTAGTTTGGTCGCAGT+TGG | + | chr4_1:27604890-27604909 | None:intergenic | 45.0% |
| GGAAGGCTGCAATGATGTAT+CGG | - | chr4_1:27605068-27605087 | Msa0542500:intron | 45.0% | |
| AATCTTTCCTCTTAAGGGGG+AGG | + | chr4_1:27605128-27605147 | None:intergenic | 45.0% | |
| ATGCATCGAACCATGTTTCC+AGG | + | chr4_1:27605236-27605255 | None:intergenic | 45.0% | |
| ACCGGCACTATCTCTACTAT+TGG | + | chr4_1:27605564-27605583 | None:intergenic | 45.0% | |
| !! | AGGAGAATGAGAAGTGCTAC+CGG | + | chr4_1:27605582-27605601 | None:intergenic | 45.0% |
| GCCGAAGTCTTGAATTATGG+AGG | - | chr4_1:27605746-27605765 | Msa0542500:CDS | 45.0% | |
| !!! | TTTTTTTTCTTCGAGGGGCC+GGG | - | chr4_1:27605801-27605820 | Msa0542500:CDS | 45.0% |
| ! | TTCCTTGTGTGACCGTTTTC+GGG | - | chr4_1:27606002-27606021 | Msa0542500:CDS | 45.0% |
| TGGTTAGTGGAGGATATACC+AGG | + | chr4_1:27606604-27606623 | None:intergenic | 45.0% | |
| TCTCTTGCTTCAAGAGGAGT+GGG | + | chr4_1:27607035-27607054 | None:intergenic | 45.0% | |
| TTCTCTTGCTTCAAGAGGAG+TGG | + | chr4_1:27607036-27607055 | None:intergenic | 45.0% | |
| ! | GCTGATTCTCTTGCTTCAAG+AGG | + | chr4_1:27607041-27607060 | None:intergenic | 45.0% |
| CATGAAGTCATGCTGAGAAC+TGG | + | chr4_1:27607298-27607317 | None:intergenic | 45.0% | |
| !!! | AATTTAAAATATAAATATGT+TGG | - | chr4_1:27605395-27605414 | Msa0542500:intron | 5.0% |
| !!! | ATTTAAAATATAAATATGTT+GGG | - | chr4_1:27605396-27605415 | Msa0542500:intron | 5.0% |
| ! | TTGACCCTCTGGTTCCAAAG+GGG | - | chr4_1:27598631-27598650 | Msa0542500:CDS | 50.0% |
| !! | AGAACCCCTTTGGAACCAGA+GGG | + | chr4_1:27598638-27598657 | None:intergenic | 50.0% |
| CCGGATTATCAGAACCCCTT+TGG | + | chr4_1:27598648-27598667 | None:intergenic | 50.0% | |
| !! | ATAATCCGGAGTTCGGTGTC+TGG | - | chr4_1:27598659-27598678 | Msa0542500:CDS | 50.0% |
| ATTGACCAGACACCGAACTC+CGG | + | chr4_1:27598667-27598686 | None:intergenic | 50.0% | |
| !! | GTTCTGGATGCTGTTTCCTG+TGG | + | chr4_1:27599605-27599624 | None:intergenic | 50.0% |
| !! | GGTTCTGAGGCCACCTTTAT+TGG | - | chr4_1:27599665-27599684 | Msa0542500:intron | 50.0% |
| ATGGGCCATCCCTCGATATT+AGG | + | chr4_1:27599822-27599841 | None:intergenic | 50.0% | |
| ! | GCTGTTTGGTTCCATCACTG+AGG | - | chr4_1:27599893-27599912 | Msa0542500:intron | 50.0% |
| ! | GTTTGGTTCCATCACTGAGG+AGG | - | chr4_1:27599896-27599915 | Msa0542500:intron | 50.0% |
| GTTCCATCACTGAGGAGGTA+TGG | - | chr4_1:27599901-27599920 | Msa0542500:intron | 50.0% | |
| AGTCGGGTATTCTGCTGTGA+AGG | - | chr4_1:27600064-27600083 | Msa0542500:intron | 50.0% | |
| GTGCTCCCAGTCAATCAATC+AGG | - | chr4_1:27600600-27600619 | Msa0542500:CDS | 50.0% | |
| CTCCCAGTCAATCAATCAGG+AGG | - | chr4_1:27600603-27600622 | Msa0542500:CDS | 50.0% | |
| CTGGAATGCCTTACGGAAAC+AGG | + | chr4_1:27600764-27600783 | None:intergenic | 50.0% | |
| ! | GTTTCCGTAAGGCATTCCAG+TGG | - | chr4_1:27600764-27600783 | Msa0542500:intron | 50.0% |
| ! | GCATAGCTTGCAAGGTCCTT+TGG | - | chr4_1:27601175-27601194 | Msa0542500:intron | 50.0% |
| ! | CTCACAGGGGATTTCTAGGT+TGG | - | chr4_1:27601274-27601293 | Msa0542500:intron | 50.0% |
| !! | AGGGGATTTCTAGGTTGGTG+CGG | - | chr4_1:27601279-27601298 | Msa0542500:intron | 50.0% |
| ACTGTAGGGACTAGGGATCA+AGG | + | chr4_1:27601678-27601697 | None:intergenic | 50.0% | |
| GTGAGACTGTACGAGCAACA+GGG | + | chr4_1:27601802-27601821 | None:intergenic | 50.0% | |
| AGTGAGACTGTACGAGCAAC+AGG | + | chr4_1:27601803-27601822 | None:intergenic | 50.0% | |
| !! | TGGCTCTGGCAATGCTATTC+AGG | - | chr4_1:27602288-27602307 | Msa0542500:intron | 50.0% |
| CTGGCAATGCTATTCAGGTC+TGG | - | chr4_1:27602293-27602312 | Msa0542500:intron | 50.0% | |
| GGTATGCATGGCTATGCTCT+TGG | - | chr4_1:27602463-27602482 | Msa0542500:intron | 50.0% | |
| GACTCGACAAGGATGCTCAA+CGG | - | chr4_1:27602742-27602761 | Msa0542500:intron | 50.0% | |
| AGGATGCTCAACGGTAAAGG+CGG | - | chr4_1:27602751-27602770 | Msa0542500:intron | 50.0% | |
| AGTCGGAAGGGAAAACTCTG+GGG | + | chr4_1:27603185-27603204 | None:intergenic | 50.0% | |
| CAGTCGGAAGGGAAAACTCT+GGG | + | chr4_1:27603186-27603205 | None:intergenic | 50.0% | |
| TCAGTCGGAAGGGAAAACTC+TGG | + | chr4_1:27603187-27603206 | None:intergenic | 50.0% | |
| GAGCAATAGCTCAGTCGGAA+GGG | + | chr4_1:27603197-27603216 | None:intergenic | 50.0% | |
| AGAGCAATAGCTCAGTCGGA+AGG | + | chr4_1:27603198-27603217 | None:intergenic | 50.0% | |
| TGACCGAGAGAGCAGTCAAT+AGG | + | chr4_1:27603473-27603492 | None:intergenic | 50.0% | |
| CTCTATCTTGCGCTGCTGAA+GGG | + | chr4_1:27603602-27603621 | None:intergenic | 50.0% | |
| CTTCAGCAGCGCAAGATAGA+GGG | - | chr4_1:27603601-27603620 | Msa0542500:CDS | 50.0% | |
| !! | GAGGTGCATTGGTGACGAAA+AGG | - | chr4_1:27604468-27604487 | Msa0542500:CDS | 50.0% |
| AGTTGGGAGAGGGTTACCAA+AGG | + | chr4_1:27604844-27604863 | None:intergenic | 50.0% | |
| AGGAAAAGGGAGTTGGGAGA+GGG | + | chr4_1:27604854-27604873 | None:intergenic | 50.0% | |
| AACAAAGCCTCCCCCTTAAG+AGG | - | chr4_1:27605118-27605137 | Msa0542500:CDS | 50.0% | |
| ! | GGAGGCACAAAGTTCATGCA+AGG | - | chr4_1:27605152-27605171 | Msa0542500:CDS | 50.0% |
| TACCCGAAAACGGTCACACA+AGG | + | chr4_1:27606007-27606026 | None:intergenic | 50.0% | |
| GGGACACAAGTTACCCTCAT+CGG | + | chr4_1:27607015-27607034 | None:intergenic | 50.0% | |
| CATGCTTCTGTAGTGGCTCT+TGG | - | chr4_1:27607132-27607151 | Msa0542500:intron | 50.0% | |
| !! | CAGAACCCCTTTGGAACCAG+AGG | + | chr4_1:27598639-27598658 | None:intergenic | 55.0% |
| GGACCATACCTCCTCAGTGA+TGG | + | chr4_1:27599907-27599926 | None:intergenic | 55.0% | |
| TCTGCTGTGAAGGAAGCTGC+AGG | - | chr4_1:27600074-27600093 | Msa0542500:intron | 55.0% | |
| !! | GGCGGATTACTCAGGTCTCA+AGG | - | chr4_1:27600690-27600709 | Msa0542500:intron | 55.0% |
| CAGTTGGACGATCACTCCTG+TGG | - | chr4_1:27601214-27601233 | Msa0542500:intron | 55.0% | |
| TTGGACGATCACTCCTGTGG+TGG | - | chr4_1:27601217-27601236 | Msa0542500:intron | 55.0% | |
| TGTATGGCTGCACGCTTGCA+TGG | - | chr4_1:27601823-27601842 | Msa0542500:intron | 55.0% | |
| GTCGGAAGGGAAAACTCTGG+GGG | + | chr4_1:27603184-27603203 | None:intergenic | 55.0% | |
| CCTCTATCTTGCGCTGCTGA+AGG | + | chr4_1:27603603-27603622 | None:intergenic | 55.0% | |
| CCTTCAGCAGCGCAAGATAG+AGG | - | chr4_1:27603600-27603619 | Msa0542500:CDS | 55.0% | |
| GAGGAAAAGGGAGTTGGGAG+AGG | + | chr4_1:27604855-27604874 | None:intergenic | 55.0% | |
| GGTTAATGACTTTCGGCGCC+TGG | - | chr4_1:27606583-27606602 | Msa0542500:intron | 55.0% | |
| ! | CACTGAGGAGGTATGGTCCG+TGG | - | chr4_1:27599908-27599927 | Msa0542500:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 27598350 | 27607386 | 27598350 | ID=Msa0542500;Name=Msa0542500 |
| chr4_1 | mRNA | 27598350 | 27607386 | 27598350 | ID=Msa0542500-mRNA-1;Parent=Msa0542500;Name=Msa0542500-mRNA-1;_AED=0.07;_eAED=0.07;_QI=117|1|1|1|0.9|0.81|11|274|634 |
| chr4_1 | exon | 27598350 | 27598772 | 27598350 | ID=Msa0542500-mRNA-1:exon:7483;Parent=Msa0542500-mRNA-1 |
| chr4_1 | exon | 27599492 | 27599558 | 27599492 | ID=Msa0542500-mRNA-1:exon:7482;Parent=Msa0542500-mRNA-1 |
| chr4_1 | exon | 27600563 | 27600708 | 27600563 | ID=Msa0542500-mRNA-1:exon:7481;Parent=Msa0542500-mRNA-1 |
| chr4_1 | exon | 27602069 | 27602138 | 27602069 | ID=Msa0542500-mRNA-1:exon:7480;Parent=Msa0542500-mRNA-1 |
| chr4_1 | exon | 27602767 | 27603006 | 27602767 | ID=Msa0542500-mRNA-1:exon:7479;Parent=Msa0542500-mRNA-1 |
| chr4_1 | exon | 27603427 | 27603730 | 27603427 | ID=Msa0542500-mRNA-1:exon:7478;Parent=Msa0542500-mRNA-1 |
| chr4_1 | exon | 27604445 | 27604555 | 27604445 | ID=Msa0542500-mRNA-1:exon:7477;Parent=Msa0542500-mRNA-1 |
| chr4_1 | exon | 27605077 | 27605227 | 27605077 | ID=Msa0542500-mRNA-1:exon:7476;Parent=Msa0542500-mRNA-1 |
| chr4_1 | exon | 27605641 | 27606166 | 27605641 | ID=Msa0542500-mRNA-1:exon:7475;Parent=Msa0542500-mRNA-1 |
| chr4_1 | exon | 27606687 | 27606857 | 27606687 | ID=Msa0542500-mRNA-1:exon:7474;Parent=Msa0542500-mRNA-1 |
| chr4_1 | exon | 27607300 | 27607386 | 27607300 | ID=Msa0542500-mRNA-1:exon:7473;Parent=Msa0542500-mRNA-1 |
| chr4_1 | five_prime_UTR | 27607300 | 27607386 | 27607300 | ID=Msa0542500-mRNA-1:five_prime_utr;Parent=Msa0542500-mRNA-1 |
| chr4_1 | five_prime_UTR | 27606828 | 27606857 | 27606828 | ID=Msa0542500-mRNA-1:five_prime_utr;Parent=Msa0542500-mRNA-1 |
| chr4_1 | CDS | 27606687 | 27606827 | 27606687 | ID=Msa0542500-mRNA-1:cds;Parent=Msa0542500-mRNA-1 |
| chr4_1 | CDS | 27605641 | 27606166 | 27605641 | ID=Msa0542500-mRNA-1:cds;Parent=Msa0542500-mRNA-1 |
| chr4_1 | CDS | 27605077 | 27605227 | 27605077 | ID=Msa0542500-mRNA-1:cds;Parent=Msa0542500-mRNA-1 |
| chr4_1 | CDS | 27604445 | 27604555 | 27604445 | ID=Msa0542500-mRNA-1:cds;Parent=Msa0542500-mRNA-1 |
| chr4_1 | CDS | 27603427 | 27603730 | 27603427 | ID=Msa0542500-mRNA-1:cds;Parent=Msa0542500-mRNA-1 |
| chr4_1 | CDS | 27602767 | 27603006 | 27602767 | ID=Msa0542500-mRNA-1:cds;Parent=Msa0542500-mRNA-1 |
| chr4_1 | CDS | 27602069 | 27602138 | 27602069 | ID=Msa0542500-mRNA-1:cds;Parent=Msa0542500-mRNA-1 |
| chr4_1 | CDS | 27600563 | 27600708 | 27600563 | ID=Msa0542500-mRNA-1:cds;Parent=Msa0542500-mRNA-1 |
| chr4_1 | CDS | 27599492 | 27599558 | 27599492 | ID=Msa0542500-mRNA-1:cds;Parent=Msa0542500-mRNA-1 |
| chr4_1 | CDS | 27598624 | 27598772 | 27598624 | ID=Msa0542500-mRNA-1:cds;Parent=Msa0542500-mRNA-1 |
| chr4_1 | three_prime_UTR | 27598350 | 27598623 | 27598350 | ID=Msa0542500-mRNA-1:three_prime_utr;Parent=Msa0542500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
