Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604540 | XP_013456284.1 | 90.323 | 682 | 30 | 2 | 1 | 682 | 1 | 646 | 0.0 | 1258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032090 | Msa0604540 | 0.802280 | 6.047965e-49 | -8.615850e-47 |
| Msa0032430 | Msa0604540 | 0.807866 | 4.100943e-50 | -8.615850e-47 |
| Msa0032920 | Msa0604540 | -0.816699 | 4.834664e-52 | -8.615850e-47 |
| Msa0032960 | Msa0604540 | -0.827846 | 1.248295e-54 | -8.615850e-47 |
| Msa0094120 | Msa0604540 | 0.808097 | 3.661776e-50 | -8.615850e-47 |
| Msa0604540 | Msa0626450 | 0.825949 | 3.545272e-54 | -8.615850e-47 |
| Msa0604540 | Msa0626490 | 0.827842 | 1.251345e-54 | -8.615850e-47 |
| Msa0604540 | Msa0645590 | 0.918054 | 2.499704e-86 | -8.615850e-47 |
| Msa0604540 | Msa0655560 | 0.811719 | 6.082446e-51 | -8.615850e-47 |
| Msa0604540 | Msa0664600 | 0.818393 | 2.006770e-52 | -8.615850e-47 |
| Msa0604540 | Msa0685210 | 0.836901 | 7.130800e-57 | -8.615850e-47 |
| Msa0604540 | Msa0724910 | 0.837668 | 4.539012e-57 | -8.615850e-47 |
| Msa0604540 | Msa0730430 | 0.800059 | 1.721467e-48 | -8.615850e-47 |
| Msa0604540 | Msa0744000 | 0.800123 | 1.670522e-48 | -8.615850e-47 |
| Msa0604540 | Msa0770720 | 0.825593 | 4.308001e-54 | -8.615850e-47 |
| Msa0604540 | Msa0966400 | 0.804077 | 2.568181e-49 | -8.615850e-47 |
| Msa0604540 | Msa1018690 | 0.804482 | 2.114620e-49 | -8.615850e-47 |
| Msa0604540 | Msa1020670 | 0.822050 | 2.914166e-53 | -8.615850e-47 |
| Msa0604540 | Msa1047870 | 0.813121 | 3.004624e-51 | -8.615850e-47 |
| Msa0604540 | Msa1140210 | 0.802646 | 5.082466e-49 | -8.615850e-47 |
| Msa0604540 | Msa1182860 | 0.817911 | 2.579276e-52 | -8.615850e-47 |
| Msa0604540 | Msa1209460 | 0.813467 | 2.521759e-51 | -8.615850e-47 |
| Msa0604540 | Msa1366600 | 0.819990 | 8.686468e-53 | -8.615850e-47 |
| Msa0604540 | Msa1413690 | 0.806150 | 9.460511e-50 | -8.615850e-47 |
| Msa0604540 | Msa1440960 | 0.816813 | 4.557410e-52 | -8.615850e-47 |
| Msa0604540 | Msa1454140 | 0.817383 | 3.393336e-52 | -8.615850e-47 |
| Msa0604540 | Msa1464810 | 0.808417 | 3.129362e-50 | -8.615850e-47 |
| Msa0136650 | Msa0604540 | 0.807854 | 4.124453e-50 | -8.615850e-47 |
| Msa0172070 | Msa0604540 | 0.801214 | 1.000831e-48 | -8.615850e-47 |
| Msa0225740 | Msa0604540 | 0.810005 | 1.429143e-50 | -8.615850e-47 |
| Msa0380620 | Msa0604540 | 0.802707 | 4.936305e-49 | -8.615850e-47 |
| Msa0430260 | Msa0604540 | 0.815264 | 1.010451e-51 | -8.615850e-47 |
| Msa0462500 | Msa0604540 | 0.800933 | 1.141979e-48 | -8.615850e-47 |
| Msa0479170 | Msa0604540 | 0.809574 | 1.768787e-50 | -8.615850e-47 |
| Msa0240150 | Msa0604540 | 0.804382 | 2.218993e-49 | -8.615850e-47 |
| Msa0255090 | Msa0604540 | 0.803771 | 2.973862e-49 | -8.615850e-47 |
| Msa0259380 | Msa0604540 | 0.800651 | 1.303863e-48 | -8.615850e-47 |
| Msa0292330 | Msa0604540 | 0.813847 | 2.080105e-51 | -8.615850e-47 |
| Msa0340090 | Msa0604540 | 0.808770 | 2.631125e-50 | -8.615850e-47 |
| Msa0532070 | Msa0604540 | 0.833236 | 5.989295e-56 | -8.615850e-47 |
| Msa0542500 | Msa0604540 | 0.901377 | 2.849583e-78 | -8.615850e-47 |
| Msa0569200 | Msa0604540 | 0.805319 | 1.413493e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604540 | MtrunA17_Chr4g0033441 | 90.323 | 682 | 30 | 2 | 1 | 682 | 1 | 646 | 0.0 | 1258 |
| Msa0604540 | MtrunA17_Chr2g0329331 | 52.693 | 687 | 284 | 9 | 2 | 678 | 851 | 1506 | 0.0 | 667 |
| Msa0604540 | MtrunA17_Chr2g0329331 | 57.343 | 429 | 133 | 7 | 5 | 388 | 4 | 427 | 9.43e-146 | 461 |
| Msa0604540 | MtrunA17_Chr2g0329331 | 36.905 | 168 | 97 | 4 | 333 | 496 | 689 | 851 | 1.81e-17 | 87.4 |
| Msa0604540 | MtrunA17_Chr2g0329301 | 63.386 | 254 | 89 | 2 | 87 | 340 | 3 | 252 | 8.83e-101 | 309 |
| Msa0604540 | MtrunA17_Chr2g0329291 | 59.559 | 272 | 88 | 3 | 89 | 360 | 1 | 250 | 3.51e-99 | 306 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604540 | AT1G05950.1 | 31.222 | 679 | 350 | 20 | 1 | 653 | 10 | 597 | 8.63e-83 | 274 |
| Msa0604540 | AT1G05950.3 | 31.355 | 657 | 334 | 20 | 4 | 634 | 13 | 578 | 2.09e-78 | 262 |
| Msa0604540 | AT1G05950.4 | 32.578 | 574 | 297 | 17 | 4 | 553 | 13 | 520 | 4.05e-74 | 249 |
| Msa0604540 | AT1G05950.2 | 32.578 | 574 | 297 | 17 | 4 | 553 | 13 | 520 | 4.05e-74 | 249 |
| Msa0604540 | AT1G05950.5 | 32.409 | 577 | 300 | 17 | 1 | 553 | 10 | 520 | 5.42e-74 | 249 |
Find 144 sgRNAs with CRISPR-Local
Find 572 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAATCTTGAAGACTTT+GGG | 0.158603 | 4_2:+50178786 | None:intergenic |
| CTGTTGAGACTTCAGAATTT+TGG | 0.161594 | 4_2:+50181783 | None:intergenic |
| CAGCTATCATTGACAGAAAA+AGG | 0.162964 | 4_2:-50181995 | Msa0604540:CDS |
| TTTACCTGAGACAATGTTTA+AGG | 0.186660 | 4_2:+50183311 | None:intergenic |
| GGTTCTGAGGCCACCTTTAT+TGG | 0.191132 | 4_2:-50182074 | Msa0604540:CDS |
| CCTTCTTGCTGTCGATTAAA+AGG | 0.199021 | 4_2:+50181882 | None:intergenic |
| TAACACTGATATTATGCTTT+TGG | 0.222359 | 4_2:-50181223 | Msa0604540:CDS |
| AACTTGCAAAATTCGTTAAA+TGG | 0.228149 | 4_2:+50182103 | None:intergenic |
| CCGACAAATCTTTCCTCTTA+AGG | 0.263512 | 4_2:+50176551 | None:intergenic |
| TTATCTCACAGGGGATTTCT+AGG | 0.264933 | 4_2:-50180469 | Msa0604540:intron |
| TGGCTCTGGCAATGCTATTC+AGG | 0.269758 | 4_2:-50179394 | Msa0604540:intron |
| AAGGACAGAAACTTTCGATA+TGG | 0.276928 | 4_2:+50181901 | None:intergenic |
| GTTGAATAAACTGAGAAGTA+TGG | 0.279829 | 4_2:-50174608 | Msa0604540:CDS |
| ATGGGCCATCCCTCGATATT+AGG | 0.291937 | 4_2:+50181920 | None:intergenic |
| TAACTTATCGTTGTACTCTA+TGG | 0.296874 | 4_2:-50174475 | Msa0604540:three_prime_UTR |
| ATCACCAATGCTATACAATT+TGG | 0.297771 | 4_2:-50179462 | Msa0604540:CDS |
| TGTGAGATAACTTCAGAATA+AGG | 0.310344 | 4_2:+50180482 | None:intergenic |
| GTATAGCATTGGTGATCTTC+TGG | 0.317782 | 4_2:+50179469 | None:intergenic |
| ATAAGTAAGGACTTGGATTC+TGG | 0.324800 | 4_2:-50179648 | Msa0604540:CDS |
| AATGGCAGATATTCTAGTTC+TGG | 0.328231 | 4_2:+50182121 | None:intergenic |
| ATATAGGACTCTGTCACTTC+AGG | 0.328571 | 4_2:+50179669 | None:intergenic |
| CGACAAATCTTTCCTCTTAA+GGG | 0.330750 | 4_2:+50176552 | None:intergenic |
| GCATAGCTTGCAAGGTCCTT+TGG | 0.341619 | 4_2:-50180564 | Msa0604540:intron |
| ACCTTTGAACTGAACCTGTT+TGG | 0.350722 | 4_2:+50183339 | None:intergenic |
| TCCAACTGAGGATGCAATTC+AGG | 0.359131 | 4_2:-50182798 | Msa0604540:CDS |
| TCTTTGAATCTTGAAGACTT+TGG | 0.360035 | 4_2:+50178785 | None:intergenic |
| ATTTGTTCACATCCATTTCA+TGG | 0.360457 | 4_2:+50179526 | None:intergenic |
| ATCAATGATAGAATGCATTA+TGG | 0.363892 | 4_2:-50176635 | Msa0604540:CDS |
| TCAGGTGTTTCTACAACATT+TGG | 0.364760 | 4_2:-50182780 | Msa0604540:CDS |
| ATGCATCGAACCATGTTTCC+AGG | 0.384498 | 4_2:+50176449 | None:intergenic |
| GTATATGTCATGAAAACAAT+TGG | 0.391171 | 4_2:-50175493 | Msa0604540:CDS |
| TGCAAGGTCCTTTGGTCAAA+AGG | 0.391451 | 4_2:-50180556 | Msa0604540:CDS |
| CATGCTTCTGTAGTGGCTCT+TGG | 0.392857 | 4_2:-50174549 | Msa0604540:three_prime_UTR |
| TTTACAAGATTTGAGGGTAG+TGG | 0.401313 | 4_2:-50179715 | Msa0604540:CDS |
| AATTTCATATATGCCAATAA+AGG | 0.402771 | 4_2:+50182061 | None:intergenic |
| TCAAGCTGTATTGCAGTGAT+TGG | 0.404034 | 4_2:-50174416 | Msa0604540:three_prime_UTR |
| CCTTCAGCAGCGCAAGATAG+AGG | 0.405235 | 4_2:-50178082 | Msa0604540:CDS |
| ATCCAAGTCCTTACTTATAT+AGG | 0.408398 | 4_2:+50179653 | None:intergenic |
| TTTATCTTGCAGGATCTAGA+TGG | 0.422322 | 4_2:-50175515 | Msa0604540:intron |
| TAACCTCCTGATTGATTGAC+TGG | 0.422854 | 4_2:+50181133 | None:intergenic |
| TATATGCTTCCAACATTACT+TGG | 0.425020 | 4_2:+50174576 | None:intergenic |
| CAAATTCTGAGAATGTTAAC+TGG | 0.435144 | 4_2:-50178036 | Msa0604540:intron |
| CATATAGTTTACAAGATTTG+AGG | 0.436673 | 4_2:-50179722 | Msa0604540:CDS |
| ACAGCAAGTAATTGCCAAAC+AGG | 0.437795 | 4_2:-50182702 | Msa0604540:intron |
| CTCTATCTTGCGCTGCTGAA+GGG | 0.440040 | 4_2:+50178083 | None:intergenic |
| CCTCTATCTTGCGCTGCTGA+AGG | 0.443269 | 4_2:+50178082 | None:intergenic |
| AATAGCATTGCCAGAGCCAT+TGG | 0.446449 | 4_2:+50179398 | None:intergenic |
| AAGAAGAAAACACACCTGTT+TGG | 0.450078 | 4_2:+50182688 | None:intergenic |
| AACATTGAAGCCAACCAAAC+AGG | 0.450094 | 4_2:-50183353 | Msa0604540:five_prime_UTR |
| TATCATGGAGACCCATGAAA+TGG | 0.452413 | 4_2:-50179538 | Msa0604540:CDS |
| CCTTTCAATTACATCCTTGA+GGG | 0.460597 | 4_2:+50181101 | None:intergenic |
| AGGACAGAAACTTTCGATAT+GGG | 0.463069 | 4_2:+50181902 | None:intergenic |
| GGTTGAGAAATATGATAAGT+TGG | 0.466137 | 4_2:+50175464 | None:intergenic |
| TTGAACTGAACCTGTTTGGT+TGG | 0.466458 | 4_2:+50183343 | None:intergenic |
| TATAGGACTCTGTCACTTCA+GGG | 0.467012 | 4_2:+50179670 | None:intergenic |
| TATACAATTTGGTGAACATC+AGG | 0.472255 | 4_2:-50179451 | Msa0604540:CDS |
| GACAAATCTTTCCTCTTAAG+GGG | 0.476888 | 4_2:+50176553 | None:intergenic |
| GTTCCATCACTGAGGAGGTA+TGG | 0.478798 | 4_2:-50181838 | Msa0604540:CDS |
| TTGAATAAACTGAGAAGTAT+GGG | 0.480086 | 4_2:-50174607 | Msa0604540:CDS |
| TTCACCAAATTGTATAGCAT+TGG | 0.480139 | 4_2:+50179458 | None:intergenic |
| GTCCTATATAAGTAAGGACT+TGG | 0.486129 | 4_2:-50179655 | Msa0604540:CDS |
| GACAGAGTCCTATATAAGTA+AGG | 0.487508 | 4_2:-50179661 | Msa0604540:CDS |
| ACAAGGATGCTCAACGGTAA+AGG | 0.491827 | 4_2:-50178934 | Msa0604540:CDS |
| TATCTTCTCTAATAAGAAAG+AGG | 0.494834 | 4_2:-50178744 | Msa0604540:CDS |
| CAGTTTAAATCCAATGGCTC+TGG | 0.497458 | 4_2:-50179408 | Msa0604540:CDS |
| TTATTCTGAAGTTATCTCAC+AGG | 0.498048 | 4_2:-50180480 | Msa0604540:CDS |
| GTGCTCCCAGTCAATCAATC+AGG | 0.501419 | 4_2:-50181139 | Msa0604540:CDS |
| TTTGAATCTTGAAGACTTTG+GGG | 0.502496 | 4_2:+50178787 | None:intergenic |
| CAAACCTTAAACATTGTCTC+AGG | 0.506427 | 4_2:-50183315 | Msa0604540:intron |
| ATATAGTTTACAAGATTTGA+GGG | 0.508018 | 4_2:-50179721 | Msa0604540:CDS |
| TTGGATTTAAACTGCACAGA+TGG | 0.508608 | 4_2:+50179417 | None:intergenic |
| CTAAACTGAACCTGGAAACA+TGG | 0.510096 | 4_2:-50176459 | Msa0604540:CDS |
| CCTTAAGAGGAAAGATTTGT+CGG | 0.510361 | 4_2:-50176551 | Msa0604540:CDS |
| TATCATATTTCTCAACCAAA+CGG | 0.515785 | 4_2:-50175458 | Msa0604540:intron |
| TTTGTTCACATCCATTTCAT+GGG | 0.518510 | 4_2:+50179527 | None:intergenic |
| TTCTCTTGCTTCAAGAGGAG+TGG | 0.519482 | 4_2:+50174648 | None:intergenic |
| GTTTATATTAACAGTTACAT+TGG | 0.520185 | 4_2:+50174705 | None:intergenic |
| TCTCTTGCTTCAAGAGGAGT+GGG | 0.522171 | 4_2:+50174649 | None:intergenic |
| CATGAAGTCATGCTGAGAAC+TGG | 0.522441 | 4_2:+50174386 | None:intergenic |
| CCCTCAAGGATGTAATTGAA+AGG | 0.522915 | 4_2:-50181101 | Msa0604540:intron |
| TCAAAAGGAGTTCTAGCAGT+TGG | 0.526233 | 4_2:-50180541 | Msa0604540:CDS |
| ACCAAACAGGTTCAGTTCAA+AGG | 0.530082 | 4_2:-50183340 | Msa0604540:five_prime_UTR |
| GAATATTAACCAAGTAATGT+TGG | 0.531034 | 4_2:-50174585 | Msa0604540:exon |
| TATATGTCATGAAAACAATT+GGG | 0.531779 | 4_2:-50175492 | Msa0604540:CDS |
| GAGTTAGAATGATTTGAACT+TGG | 0.533019 | 4_2:+50178823 | None:intergenic |
| CTATTCTCAAAGCAAAGAAA+AGG | 0.537022 | 4_2:-50181187 | Msa0604540:CDS |
| ATTTCAATATCACCCTCACT+TGG | 0.540894 | 4_2:+50179612 | None:intergenic |
| GAGAAATATGATAAGTTGGT+AGG | 0.544080 | 4_2:+50175468 | None:intergenic |
| AAGTTTAAGTGTTCCGATGA+GGG | 0.544204 | 4_2:-50174682 | Msa0604540:CDS |
| GTAATAAATCAAGAAGGGAC+AGG | 0.545367 | 4_2:-50176592 | Msa0604540:CDS |
| ACCTGAATTGCATCCTCAGT+TGG | 0.546001 | 4_2:+50182797 | None:intergenic |
| TAGACCATGTGATTCTATCA+TGG | 0.549522 | 4_2:-50179553 | Msa0604540:CDS |
| GCTGATTCTCTTGCTTCAAG+AGG | 0.555429 | 4_2:+50174643 | None:intergenic |
| GCAAGTTGATTGTGGTTCTG+AGG | 0.556738 | 4_2:-50182087 | Msa0604540:CDS |
| ACCTTTCAATTACATCCTTG+AGG | 0.562218 | 4_2:+50181100 | None:intergenic |
| AATAAGAAAGAGGAATGAGC+TGG | 0.567307 | 4_2:-50178734 | Msa0604540:intron |
| TACTTGCTGTTGAGAAGCTG+TGG | 0.567536 | 4_2:+50182715 | None:intergenic |
| GGAAGGCTGCAATGATGTAT+CGG | 0.573097 | 4_2:-50176614 | Msa0604540:CDS |
| CTATGAAGATTGACTCGACA+AGG | 0.577961 | 4_2:-50178951 | Msa0604540:CDS |
| CTTCAGCAGCGCAAGATAGA+GGG | 0.579807 | 4_2:-50178081 | Msa0604540:CDS |
| ACATGGAAGTAAACCACCAC+AGG | 0.580384 | 4_2:+50180509 | None:intergenic |
| CTTCAGAATAAGGAAGCACA+TGG | 0.581249 | 4_2:+50180492 | None:intergenic |
| GGACCATACCTCCTCAGTGA+TGG | 0.581962 | 4_2:+50181835 | None:intergenic |
| TATTCTGAAGTTATCTCACA+GGG | 0.582725 | 4_2:-50180479 | Msa0604540:CDS |
| ATGATAGAATGCATTATGGA+AGG | 0.584757 | 4_2:-50176631 | Msa0604540:CDS |
| GGTTATTAAAGTTCCCCTCA+AGG | 0.585039 | 4_2:-50181115 | Msa0604540:CDS |
| TCTGTGCAGTTTAAATCCAA+TGG | 0.586104 | 4_2:-50179414 | Msa0604540:CDS |
| TTCATATATGCCAATAAAGG+TGG | 0.587022 | 4_2:+50182064 | None:intergenic |
| GTATCGGTAATAAATCAAGA+AGG | 0.589608 | 4_2:-50176598 | Msa0604540:CDS |
| GTTTGGTTCCATCACTGAGG+AGG | 0.590291 | 4_2:-50181843 | Msa0604540:CDS |
| TGACTAATTCGCATTTCACA+TGG | 0.590700 | 4_2:+50174440 | None:intergenic |
| CAAGTTTAAGTGTTCCGATG+AGG | 0.593108 | 4_2:-50174683 | Msa0604540:CDS |
| TCTGCTGTGAAGGAAGCTGC+AGG | 0.595596 | 4_2:-50181665 | Msa0604540:intron |
| CTTTCAATTACATCCTTGAG+GGG | 0.598422 | 4_2:+50181102 | None:intergenic |
| GGGACACAAGTTACCCTCAT+CGG | 0.598530 | 4_2:+50174669 | None:intergenic |
| AAAGAATGTTCCTAATATCG+AGG | 0.599060 | 4_2:-50181930 | Msa0604540:CDS |
| CACTGAGGAGGTATGGTCCG+TGG | 0.602860 | 4_2:-50181831 | Msa0604540:CDS |
| TATTTATAGTAAACCAAGTG+AGG | 0.603401 | 4_2:-50179625 | Msa0604540:CDS |
| TGAAGTAGAGCTCATAGATG+TGG | 0.603411 | 4_2:-50182023 | Msa0604540:CDS |
| AAGAATGTTCCTAATATCGA+GGG | 0.604182 | 4_2:-50181929 | Msa0604540:CDS |
| AGTCGGGTATTCTGCTGTGA+AGG | 0.608334 | 4_2:-50181675 | Msa0604540:CDS |
| TTGTTAATATTCTACACTAG+AGG | 0.608919 | 4_2:+50174520 | None:intergenic |
| ATAAATGCATGCTTCTGTAG+TGG | 0.609840 | 4_2:-50174556 | Msa0604540:three_prime_UTR |
| TATCGGTAATAAATCAAGAA+GGG | 0.616879 | 4_2:-50176597 | Msa0604540:CDS |
| TTGGACGATCACTCCTGTGG+TGG | 0.625303 | 4_2:-50180522 | Msa0604540:CDS |
| AACCTCCTGATTGATTGACT+GGG | 0.625426 | 4_2:+50181134 | None:intergenic |
| CATGAGCAGAAAGAGAACAA+TGG | 0.627353 | 4_2:-50179588 | Msa0604540:CDS |
| ATAAATCAAGAAGGGACAGG+TGG | 0.630964 | 4_2:-50176589 | Msa0604540:CDS |
| GGAGGCACAAAGTTCATGCA+AGG | 0.632569 | 4_2:-50176530 | Msa0604540:CDS |
| ACTTGCTGTTGAGAAGCTGT+GGG | 0.635516 | 4_2:+50182716 | None:intergenic |
| ACAAATCTTTCCTCTTAAGG+GGG | 0.637703 | 4_2:+50176554 | None:intergenic |
| CTCCCAGTCAATCAATCAGG+AGG | 0.644545 | 4_2:-50181136 | Msa0604540:CDS |
| GACTCGACAAGGATGCTCAA+CGG | 0.644800 | 4_2:-50178940 | Msa0604540:CDS |
| ATTTATAGTAAACCAAGTGA+GGG | 0.646293 | 4_2:-50179624 | Msa0604540:CDS |
| ACAATATGTAGAAAACTACA+TGG | 0.650694 | 4_2:-50174501 | Msa0604540:three_prime_UTR |
| GCTGTTTGGTTCCATCACTG+AGG | 0.651655 | 4_2:-50181846 | Msa0604540:CDS |
| ATGTTCCTAATATCGAGGGA+TGG | 0.652051 | 4_2:-50181925 | Msa0604540:CDS |
| AGGATGCTCAACGGTAAAGG+CGG | 0.660364 | 4_2:-50178931 | Msa0604540:CDS |
| CAGTTGGACGATCACTCCTG+TGG | 0.662817 | 4_2:-50180525 | Msa0604540:CDS |
| CATTGGATAGAACAACAACA+TGG | 0.665876 | 4_2:-50182840 | Msa0604540:exon |
| TAAGAGGAAAGATTTGTCGG+AGG | 0.692718 | 4_2:-50176548 | Msa0604540:CDS |
| ATCAGATGTGTGTCCAACTG+AGG | 0.695565 | 4_2:-50182810 | Msa0604540:CDS |
| GTCTCCATGATAGAATCACA+TGG | 0.715164 | 4_2:+50179549 | None:intergenic |
| ATTCTGAAGTTATCTCACAG+GGG | 0.731508 | 4_2:-50180478 | Msa0604540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTTAAAAAATAAAA+CGG | + | chr4_2:50176846-50176865 | None:intergenic | 0.0% |
| !!! | AAAATAAAATTTTATTCAGA+GGG | + | chr4_2:50176319-50176338 | None:intergenic | 10.0% |
| !!! | TTTTAAAATAATTTTGACAA+AGG | - | chr4_2:50176853-50176872 | Msa0604540:intron | 10.0% |
| !! | ATATTCTTATATGTAAAAAA+TGG | + | chr4_2:50179377-50179396 | None:intergenic | 10.0% |
| !!! | AATTGTTATTTTAAATTTCT+TGG | - | chr4_2:50181334-50181353 | Msa0604540:intron | 10.0% |
| !! | TCAAGTTTAAAAAATATTAT+TGG | - | chr4_2:50182336-50182355 | Msa0604540:intron | 10.0% |
| !! | ATAATAATGTGAATTCTATT+TGG | - | chr4_2:50174551-50174570 | Msa0604540:three_prime_UTR | 15.0% |
| !! | TAATAATGTGAATTCTATTT+GGG | - | chr4_2:50174552-50174571 | Msa0604540:three_prime_UTR | 15.0% |
| !!! | ACTTTTTTTTTCTTTTCATT+TGG | + | chr4_2:50175401-50175420 | None:intergenic | 15.0% |
| !! | ATATATGCTTATTGATATAT+AGG | - | chr4_2:50175453-50175472 | Msa0604540:intron | 15.0% |
| !! | TATATGCTTATTGATATATA+GGG | - | chr4_2:50175454-50175473 | Msa0604540:intron | 15.0% |
| !! | AAACAAAAAATACATACAAA+AGG | - | chr4_2:50175941-50175960 | Msa0604540:intron | 15.0% |
| !!! | TCTTTTCGTAATAATAAAAA+TGG | + | chr4_2:50176065-50176084 | None:intergenic | 15.0% |
| !!! | ATCACTTGTTAAAATAAATT+GGG | + | chr4_2:50176186-50176205 | None:intergenic | 15.0% |
| !!! | GAAAATAAAATTTTATTCAG+AGG | + | chr4_2:50176320-50176339 | None:intergenic | 15.0% |
| !!! | ATTTTAAAAAATAAAACGGA+AGG | + | chr4_2:50176842-50176861 | None:intergenic | 15.0% |
| !!! | ATAAACAAAGTTTTTCAAAA+AGG | + | chr4_2:50177271-50177290 | None:intergenic | 15.0% |
| !!! | ACATTTTTAAATACAAATTG+TGG | - | chr4_2:50177559-50177578 | Msa0604540:intron | 15.0% |
| !!! | CATTTTTAAATACAAATTGT+GGG | - | chr4_2:50177560-50177579 | Msa0604540:intron | 15.0% |
| !! | TTGTCAAAGAAAATATAAAA+TGG | + | chr4_2:50177892-50177911 | None:intergenic | 15.0% |
| !! | ATGAACAATTAGTTATATAT+GGG | + | chr4_2:50179280-50179299 | None:intergenic | 15.0% |
| !! | TATGAACAATTAGTTATATA+TGG | + | chr4_2:50179281-50179300 | None:intergenic | 15.0% |
| !! | TGACTATAATATTCTTATAT+GGG | + | chr4_2:50179429-50179448 | None:intergenic | 15.0% |
| !! | TTGACTATAATATTCTTATA+TGG | + | chr4_2:50179430-50179449 | None:intergenic | 15.0% |
| !! | ATATTATAGTCAATATTCTT+TGG | - | chr4_2:50179437-50179456 | Msa0604540:CDS | 15.0% |
| !!! | ATTATATTAACAAAAGCATA+TGG | - | chr4_2:50181910-50181929 | Msa0604540:CDS | 15.0% |
| !!! | AAAACATACTTTAAGAAACA+TGG | + | chr4_2:50174443-50174462 | None:intergenic | 20.0% |
| !!! | TAGTTTTATAACTTGTTTAG+AGG | - | chr4_2:50175118-50175137 | Msa0604540:intron | 20.0% |
| !! | TAGTTACAATTTGTAATGTA+AGG | + | chr4_2:50175187-50175206 | None:intergenic | 20.0% |
| !! | AATTTCATATATGCCAATAA+AGG | + | chr4_2:50175643-50175662 | None:intergenic | 20.0% |
| !! | GTTTGTATTTATGCATAAAT+TGG | - | chr4_2:50176122-50176141 | Msa0604540:intron | 20.0% |
| !!! | CATCACTTGTTAAAATAAAT+TGG | + | chr4_2:50176187-50176206 | None:intergenic | 20.0% |
| !! | ATAATGATACATTAACTAAC+AGG | + | chr4_2:50176381-50176400 | None:intergenic | 20.0% |
| !!! | CAAAGCTTTTTAAATAATTG+AGG | + | chr4_2:50177598-50177617 | None:intergenic | 20.0% |
| !! | CAATTATTTAAAAAGCTTTG+TGG | - | chr4_2:50177598-50177617 | Msa0604540:intron | 20.0% |
| !! | TAGAGAAACATTATGTATAA+TGG | + | chr4_2:50177859-50177878 | None:intergenic | 20.0% |
| !!! | TTGTGTAATATATTTTACCT+TGG | - | chr4_2:50177942-50177961 | Msa0604540:intron | 20.0% |
| !! | ATATAGTTTACAAGATTTGA+GGG | - | chr4_2:50177980-50177999 | Msa0604540:intron | 20.0% |
| !!! | CATTTTTCTTTATTTTGAGA+TGG | + | chr4_2:50178212-50178231 | None:intergenic | 20.0% |
| !!! | ATTTTTCGGATAGATATTAA+GGG | + | chr4_2:50178456-50178475 | None:intergenic | 20.0% |
| !!! | AATTTTTCGGATAGATATTA+AGG | + | chr4_2:50178457-50178476 | None:intergenic | 20.0% |
| !!! | GATCTTTTTAAAGATTTCAA+AGG | - | chr4_2:50178571-50178590 | Msa0604540:intron | 20.0% |
| !! | TAGACTTATTTATATCATTC+AGG | - | chr4_2:50179595-50179614 | Msa0604540:CDS | 20.0% |
| !!! | AACTCAACTATTTTCTTTTT+GGG | - | chr4_2:50180013-50180032 | Msa0604540:intron | 20.0% |
| !!! | TTTGTTTTTCACTCTTTAAT+TGG | + | chr4_2:50180052-50180071 | None:intergenic | 20.0% |
| !! | TTAAAGAATATGAATGTACA+TGG | - | chr4_2:50180805-50180824 | Msa0604540:intron | 20.0% |
| !! | TTTCTTATGACACAATTAAA+GGG | - | chr4_2:50181673-50181692 | Msa0604540:CDS | 20.0% |
| !!! | GAAATTAATTTTAGTTGTCT+GGG | + | chr4_2:50181744-50181763 | None:intergenic | 20.0% |
| !!! | AGAAATTAATTTTAGTTGTC+TGG | + | chr4_2:50181745-50181764 | None:intergenic | 20.0% |
| !!! | TAAAAGATTTTTTTTCTTCG+AGG | - | chr4_2:50181813-50181832 | Msa0604540:CDS | 20.0% |
| !!! | AAAAGATTTTTTTTCTTCGA+GGG | - | chr4_2:50181814-50181833 | Msa0604540:CDS | 20.0% |
| !!! | GACATATTACTTATATTTTG+TGG | - | chr4_2:50181993-50182012 | Msa0604540:CDS | 20.0% |
| !! | AAAATATATATACCCGAAAA+CGG | + | chr4_2:50182037-50182056 | None:intergenic | 20.0% |
| !!! | TTTTCGGGTATATATATTTT+GGG | - | chr4_2:50182037-50182056 | Msa0604540:CDS | 20.0% |
| !!! | GTTGTTTTCAAAAAAGATAA+AGG | + | chr4_2:50182152-50182171 | None:intergenic | 20.0% |
| !! | TATATGTCATGAAAACAATT+GGG | - | chr4_2:50182209-50182228 | Msa0604540:intron | 20.0% |
| !! | ATTAACCACATTTAAATTTG+TGG | - | chr4_2:50182582-50182601 | Msa0604540:intron | 20.0% |
| !! | ATTAACCACAAATTTAAATG+TGG | + | chr4_2:50182590-50182609 | None:intergenic | 20.0% |
| !! | ATAATTAACCACTTATTTGA+CGG | - | chr4_2:50182654-50182673 | Msa0604540:intron | 20.0% |
| !! | TAAAGAATCAGACAAATAAA+AGG | + | chr4_2:50182734-50182753 | None:intergenic | 20.0% |
| !! | TTAAGTATCTTAAGGTAAAT+AGG | + | chr4_2:50182889-50182908 | None:intergenic | 20.0% |
| !!! | TAGACATTTTAAGTATCTTA+AGG | + | chr4_2:50182897-50182916 | None:intergenic | 20.0% |
| !! | GTTTATATTAACAGTTACAT+TGG | + | chr4_2:50182999-50183018 | None:intergenic | 20.0% |
| !! | ATTCCTAGAAAAAATTAACT+TGG | - | chr4_2:50183357-50183376 | Msa0604540:five_prime_UTR | 20.0% |
| !!! | ATACCAAGTTAATTTTTTCT+AGG | + | chr4_2:50183363-50183382 | None:intergenic | 20.0% |
| ! | TGAAAAAGTGACAGAAATTA+AGG | + | chr4_2:50174416-50174435 | None:intergenic | 25.0% |
| !! | ACAATTTGTGCATTTTTCTA+TGG | - | chr4_2:50174679-50174698 | Msa0604540:CDS | 25.0% |
| !!! | TTTGATGTGTGTGTTTTATT+GGG | - | chr4_2:50174786-50174805 | Msa0604540:intron | 25.0% |
| !!! | TTTTAGGTTTTCAGAATCAT+TGG | - | chr4_2:50174844-50174863 | Msa0604540:intron | 25.0% |
| !! | AGGATTGTTTGAAATGTTTA+GGG | - | chr4_2:50175138-50175157 | Msa0604540:intron | 25.0% |
| ! | AAACATTATGTATAACCGAT+CGG | + | chr4_2:50175252-50175271 | None:intergenic | 25.0% |
| !!! | TTTTCATTTGGTGATGATAA+TGG | + | chr4_2:50175389-50175408 | None:intergenic | 25.0% |
| !!! | ATTTTTCTGTTTTTGACGTT+CGG | - | chr4_2:50175502-50175521 | Msa0604540:CDS | 25.0% |
| ! | AACTTGCAAAATTCGTTAAA+TGG | + | chr4_2:50175601-50175620 | None:intergenic | 25.0% |
| ! | CTTGTTAAAATAAATTGGGA+AGG | + | chr4_2:50176182-50176201 | None:intergenic | 25.0% |
| ! | AACAATAACCTCAAATAGAT+TGG | + | chr4_2:50176269-50176288 | None:intergenic | 25.0% |
| !! | TAACACTGATATTATGCTTT+TGG | - | chr4_2:50176478-50176497 | Msa0604540:CDS | 25.0% |
| !! | AACACTGATATTATGCTTTT+GGG | - | chr4_2:50176479-50176498 | Msa0604540:CDS | 25.0% |
| !!! | AATTGTTATCGTTTTGCTAT+TGG | - | chr4_2:50176631-50176650 | Msa0604540:CDS | 25.0% |
| ! | ATAATAAGATTGCAACATAC+CGG | + | chr4_2:50176902-50176921 | None:intergenic | 25.0% |
| ! | ATGTTGCAATCTTATTATGA+AGG | - | chr4_2:50176904-50176923 | Msa0604540:intron | 25.0% |
| ! | TCAGATTATTCCAAAGTATA+GGG | + | chr4_2:50177040-50177059 | None:intergenic | 25.0% |
| ! | ATCAGATTATTCCAAAGTAT+AGG | + | chr4_2:50177041-50177060 | None:intergenic | 25.0% |
| ! | TGATAATCACAGAAGTAAAA+CGG | - | chr4_2:50177057-50177076 | Msa0604540:intron | 25.0% |
| ! | AAACGGATAGTTAATAAACT+TGG | - | chr4_2:50177074-50177093 | Msa0604540:intron | 25.0% |
| ! | AACTAAAATAGCATCACTTA+TGG | + | chr4_2:50177325-50177344 | None:intergenic | 25.0% |
| !! | GAAGTGCTTATAATTTACAA+CGG | + | chr4_2:50177488-50177507 | None:intergenic | 25.0% |
| !!! | CTTCTAAAATACTGATATCA+TGG | - | chr4_2:50177504-50177523 | Msa0604540:intron | 25.0% |
| ! | GAATCTCTTTAAATACTGTA+GGG | + | chr4_2:50177654-50177673 | None:intergenic | 25.0% |
| ! | AGAATCTCTTTAAATACTGT+AGG | + | chr4_2:50177655-50177674 | None:intergenic | 25.0% |
| !!! | TATGTATAATGGCTTTGATA+CGG | + | chr4_2:50177848-50177867 | None:intergenic | 25.0% |
| ! | CATATAGTTTACAAGATTTG+AGG | - | chr4_2:50177979-50177998 | Msa0604540:intron | 25.0% |
| ! | TATTTATAGTAAACCAAGTG+AGG | - | chr4_2:50178076-50178095 | Msa0604540:CDS | 25.0% |
| ! | ATTTATAGTAAACCAAGTGA+GGG | - | chr4_2:50178077-50178096 | Msa0604540:CDS | 25.0% |
| !! | CAGTCTAAAACTGTTTATAT+AGG | - | chr4_2:50178383-50178402 | Msa0604540:intron | 25.0% |
| !!! | TTTTTCGGATAGATATTAAG+GGG | + | chr4_2:50178455-50178474 | None:intergenic | 25.0% |
| !! | ATCTATCCGAAAAATTCTTT+TGG | - | chr4_2:50178461-50178480 | Msa0604540:intron | 25.0% |
| !! | TGCATACCAAAAGAATTTTT+CGG | + | chr4_2:50178470-50178489 | None:intergenic | 25.0% |
| !! | AAAAATTCTTTTGGTATGCA+TGG | - | chr4_2:50178470-50178489 | Msa0604540:intron | 25.0% |
| ! | TAAATGTTTCGATGAAGTAT+AGG | + | chr4_2:50178511-50178530 | None:intergenic | 25.0% |
| ! | TTACGATGAGATTATAAACA+TGG | + | chr4_2:50178651-50178670 | None:intergenic | 25.0% |
| !!! | TCTTTTTCATATGAGGTATT+TGG | + | chr4_2:50178839-50178858 | None:intergenic | 25.0% |
| !!! | TTTTGTGTCTTTTTCATATG+AGG | + | chr4_2:50178846-50178865 | None:intergenic | 25.0% |
| ! | TCATATGAAAAAGACACAAA+AGG | - | chr4_2:50178845-50178864 | Msa0604540:CDS | 25.0% |
| ! | TATCTTCTCTAATAAGAAAG+AGG | - | chr4_2:50178957-50178976 | Msa0604540:intron | 25.0% |
| ! | AATACGAATATACTTTGTTG+TGG | - | chr4_2:50179077-50179096 | Msa0604540:intron | 25.0% |
| ! | TCTGTACATTATTGACAAAA+AGG | - | chr4_2:50179157-50179176 | Msa0604540:intron | 25.0% |
| ! | TTACATATAAGAATATCGAG+TGG | - | chr4_2:50179381-50179400 | Msa0604540:intron | 25.0% |
| !!! | GAGTGCAAATATAGTTTTTT+TGG | + | chr4_2:50179571-50179590 | None:intergenic | 25.0% |
| !!! | TTTTTTCCATGAAGAATGTA+TGG | - | chr4_2:50179975-50179994 | Msa0604540:intron | 25.0% |
| !! | TTTTTCCATGAAGAATGTAT+GGG | - | chr4_2:50179976-50179995 | Msa0604540:intron | 25.0% |
| !! | GAACTCAACTATTTTCTTTT+TGG | - | chr4_2:50180012-50180031 | Msa0604540:intron | 25.0% |
| !! | ACTCAACTATTTTCTTTTTG+GGG | - | chr4_2:50180014-50180033 | Msa0604540:intron | 25.0% |
| ! | CATGTCATTAAAATGTTCTT+GGG | + | chr4_2:50180103-50180122 | None:intergenic | 25.0% |
| ! | ACATGTCATTAAAATGTTCT+TGG | + | chr4_2:50180104-50180123 | None:intergenic | 25.0% |
| !! | TTAAAGAGAGTAAAGGTTTT+TGG | - | chr4_2:50180197-50180216 | Msa0604540:intron | 25.0% |
| !! | TGGTAATGACATAATGTAAA+TGG | - | chr4_2:50180692-50180711 | Msa0604540:intron | 25.0% |
| ! | ATTAGATGATATACCTATTG+TGG | - | chr4_2:50180715-50180734 | Msa0604540:intron | 25.0% |
| ! | ATGGTTATTCATCTATAACT+AGG | + | chr4_2:50180994-50181013 | None:intergenic | 25.0% |
| ! | AAGACACAAAATAAACTCAA+TGG | + | chr4_2:50181013-50181032 | None:intergenic | 25.0% |
| ! | ATCAATGATAGAATGCATTA+TGG | - | chr4_2:50181066-50181085 | Msa0604540:intron | 25.0% |
| ! | TATCGGTAATAAATCAAGAA+GGG | - | chr4_2:50181104-50181123 | Msa0604540:CDS | 25.0% |
| ! | TCTGTCATACATCATATATT+AGG | - | chr4_2:50181277-50181296 | Msa0604540:intron | 25.0% |
| ! | CTGTCATACATCATATATTA+GGG | - | chr4_2:50181278-50181297 | Msa0604540:intron | 25.0% |
| ! | ACCTAATTAATAGATGCATA+TGG | - | chr4_2:50181444-50181463 | Msa0604540:intron | 25.0% |
| ! | TCCATATGCATCTATTAATT+AGG | + | chr4_2:50181448-50181467 | None:intergenic | 25.0% |
| ! | TTCAGCTAATAGTGAAAAAA+TGG | + | chr4_2:50181492-50181511 | None:intergenic | 25.0% |
| ! | TGGATTCCAAATAAATTCAT+GGG | + | chr4_2:50181527-50181546 | None:intergenic | 25.0% |
| ! | ATGGATTCCAAATAAATTCA+TGG | + | chr4_2:50181528-50181547 | None:intergenic | 25.0% |
| !! | ACTATTGGTTGAAATTTATG+TGG | + | chr4_2:50181568-50181587 | None:intergenic | 25.0% |
| ! | GATTATTTATCAATGCATCT+AGG | + | chr4_2:50181621-50181640 | None:intergenic | 25.0% |
| ! | GTTTCTTATGACACAATTAA+AGG | - | chr4_2:50181672-50181691 | Msa0604540:CDS | 25.0% |
| ! | TTCTTATGACACAATTAAAG+GGG | - | chr4_2:50181674-50181693 | Msa0604540:CDS | 25.0% |
| ! | TCATAATATCTATCACTCAA+AGG | + | chr4_2:50181791-50181810 | None:intergenic | 25.0% |
| !!! | AAAGATTTTTTTTCTTCGAG+GGG | - | chr4_2:50181815-50181834 | Msa0604540:CDS | 25.0% |
| !! | ATATTAACAAAAGCATATGG+TGG | - | chr4_2:50181913-50181932 | Msa0604540:CDS | 25.0% |
| ! | ATAACAAGAACTATGTTTGA+AGG | + | chr4_2:50181961-50181980 | None:intergenic | 25.0% |
| !!! | GTTTTCGGGTATATATATTT+TGG | - | chr4_2:50182036-50182055 | Msa0604540:CDS | 25.0% |
| !!! | TGTTCTGGCATTTTATTTTA+TGG | + | chr4_2:50182098-50182117 | None:intergenic | 25.0% |
| ! | AAAAAGATAAAGGAGATGAT+TGG | + | chr4_2:50182142-50182161 | None:intergenic | 25.0% |
| ! | GTATATGTCATGAAAACAAT+TGG | - | chr4_2:50182208-50182227 | Msa0604540:intron | 25.0% |
| ! | TATCATATTTCTCAACCAAA+CGG | - | chr4_2:50182243-50182262 | Msa0604540:intron | 25.0% |
| ! | AAGTTTATTGAGAAATCCAA+AGG | - | chr4_2:50182302-50182321 | Msa0604540:intron | 25.0% |
| ! | AAATGTGGTTAATAATTCTC+AGG | + | chr4_2:50182575-50182594 | None:intergenic | 25.0% |
| ! | AATTTGTGGTTAATGACTTT+CGG | - | chr4_2:50182596-50182615 | Msa0604540:intron | 25.0% |
| !! | GGTTAATTATTTTCAGTAGA+TGG | + | chr4_2:50182644-50182663 | None:intergenic | 25.0% |
| !! | TTGATTGATGTTTCTTTTGA+AGG | - | chr4_2:50182962-50182981 | Msa0604540:intron | 25.0% |
| !! | TTGAATAAACTGAGAAGTAT+GGG | - | chr4_2:50183094-50183113 | Msa0604540:intron | 25.0% |
| ! | GAATATTAACCAAGTAATGT+TGG | - | chr4_2:50183116-50183135 | Msa0604540:intron | 25.0% |
| ! | TTGTTAATATTCTACACTAG+AGG | + | chr4_2:50183184-50183203 | None:intergenic | 25.0% |
| ! | ACAATATGTAGAAAACTACA+TGG | - | chr4_2:50183200-50183219 | Msa0604540:intron | 25.0% |
| TTTACCTGAGACAATGTTTA+AGG | + | chr4_2:50174393-50174412 | None:intergenic | 30.0% | |
| !! | TTAATTTTGTATTGACCCTC+TGG | - | chr4_2:50174591-50174610 | Msa0604540:CDS | 30.0% |
| !! | TTGAGAATGTTGATAGTTTG+TGG | - | chr4_2:50174738-50174757 | Msa0604540:intron | 30.0% |
| ! | CTTTGATGTGTGTGTTTTAT+TGG | - | chr4_2:50174785-50174804 | Msa0604540:intron | 30.0% |
| CTAATTCAAAGATTAAGCTG+TGG | - | chr4_2:50175046-50175065 | Msa0604540:intron | 30.0% | |
| ! | TGTTTTACAGTTTCTCTGTT+TGG | - | chr4_2:50175094-50175113 | Msa0604540:intron | 30.0% |
| ! | GAGGATTGTTTGAAATGTTT+AGG | - | chr4_2:50175137-50175156 | Msa0604540:intron | 30.0% |
| ! | GGGATTTTGTATGCATTTTA+TGG | - | chr4_2:50175158-50175177 | Msa0604540:intron | 30.0% |
| !!! | GTTAAATTAGTTTTCCCGAA+TGG | - | chr4_2:50175219-50175238 | Msa0604540:intron | 30.0% |
| TTGATATATAGGGATGTGTT+TGG | - | chr4_2:50175464-50175483 | Msa0604540:CDS | 30.0% | |
| AGAAAAATCAGTAGAGAAGA+TGG | + | chr4_2:50175490-50175509 | None:intergenic | 30.0% | |
| TTCATATATGCCAATAAAGG+TGG | + | chr4_2:50175640-50175659 | None:intergenic | 30.0% | |
| AGCTATCATTGACAGAAAAA+GGG | - | chr4_2:50175707-50175726 | Msa0604540:intron | 30.0% | |
| ATTGACAGAAAAAGGGATTA+TGG | - | chr4_2:50175714-50175733 | Msa0604540:intron | 30.0% | |
| AAAGAATGTTCCTAATATCG+AGG | - | chr4_2:50175771-50175790 | Msa0604540:intron | 30.0% | |
| AAGAATGTTCCTAATATCGA+GGG | - | chr4_2:50175772-50175791 | Msa0604540:intron | 30.0% | |
| !!! | GTCTATACTTTTTTCAACCA+CGG | + | chr4_2:50175890-50175909 | None:intergenic | 30.0% |
| ! | ACTTTTACTTCATCTTTTGC+AGG | + | chr4_2:50175985-50176004 | None:intergenic | 30.0% |
| AAATTGGCATCACAGATTAA+AGG | - | chr4_2:50176138-50176157 | Msa0604540:intron | 30.0% | |
| GTTAAAATAAATTGGGAAGG+TGG | + | chr4_2:50176179-50176198 | None:intergenic | 30.0% | |
| ATTCGTCATGATGAATACAT+AGG | - | chr4_2:50176234-50176253 | Msa0604540:intron | 30.0% | |
| TTCGTCATGATGAATACATA+GGG | - | chr4_2:50176235-50176254 | Msa0604540:intron | 30.0% | |
| TTTCTGTTCCAATCTATTTG+AGG | - | chr4_2:50176258-50176277 | Msa0604540:intron | 30.0% | |
| ! | AATTTTATTCAGAGGGAAGA+AGG | + | chr4_2:50176312-50176331 | None:intergenic | 30.0% |
| !!! | CTGAATTTTAGCTTTGACAA+AGG | - | chr4_2:50176403-50176422 | Msa0604540:intron | 30.0% |
| CTATTCTCAAAGCAAAGAAA+AGG | - | chr4_2:50176514-50176533 | Msa0604540:CDS | 30.0% | |
| TATCTTATCAATGGGAAAAC+TGG | + | chr4_2:50176697-50176716 | None:intergenic | 30.0% | |
| TTCCCATTGATAAGATAATG+AGG | - | chr4_2:50176700-50176719 | Msa0604540:intron | 30.0% | |
| CATATCAAAAAAGATTCCAC+TGG | + | chr4_2:50176745-50176764 | None:intergenic | 30.0% | |
| GAATAGACATGATTATTAGC+CGG | - | chr4_2:50176880-50176899 | Msa0604540:intron | 30.0% | |
| AATGATGTCTCCTGTAATTA+GGG | - | chr4_2:50176949-50176968 | Msa0604540:intron | 30.0% | |
| TGAAATTTGTCCCTATACTT+TGG | - | chr4_2:50177027-50177046 | Msa0604540:intron | 30.0% | |
| TGTGAGATAACTTCAGAATA+AGG | + | chr4_2:50177222-50177241 | None:intergenic | 30.0% | |
| !! | TTATTCTGAAGTTATCTCAC+AGG | - | chr4_2:50177221-50177240 | Msa0604540:intron | 30.0% |
| !! | TATTCTGAAGTTATCTCACA+GGG | - | chr4_2:50177222-50177241 | Msa0604540:intron | 30.0% |
| GTAATCGTTGTCACTAAAAT+TGG | + | chr4_2:50177458-50177477 | None:intergenic | 30.0% | |
| TTTAAATACTGTAGGGACTA+GGG | + | chr4_2:50177647-50177666 | None:intergenic | 30.0% | |
| TAAAGCAAGGTTAATGTATG+AGG | - | chr4_2:50177720-50177739 | Msa0604540:intron | 30.0% | |
| !! | ATGAGAATTTATTTCTGCCA+AGG | + | chr4_2:50177962-50177981 | None:intergenic | 30.0% |
| !! | GGTAGTGGAGAAAAATATAA+TGG | - | chr4_2:50178001-50178020 | Msa0604540:intron | 30.0% |
| ATCCAAGTCCTTACTTATAT+AGG | + | chr4_2:50178051-50178070 | None:intergenic | 30.0% | |
| TTTGTTCACATCCATTTCAT+GGG | + | chr4_2:50178177-50178196 | None:intergenic | 30.0% | |
| ATTTGTTCACATCCATTTCA+TGG | + | chr4_2:50178178-50178197 | None:intergenic | 30.0% | |
| ATCACCAATGCTATACAATT+TGG | - | chr4_2:50178239-50178258 | Msa0604540:intron | 30.0% | |
| TTCACCAAATTGTATAGCAT+TGG | + | chr4_2:50178246-50178265 | None:intergenic | 30.0% | |
| ! | TATACAATTTGGTGAACATC+AGG | - | chr4_2:50178250-50178269 | Msa0604540:intron | 30.0% |
| GACTATTTGTAGAAAGTAGT+AGG | - | chr4_2:50178335-50178354 | Msa0604540:intron | 30.0% | |
| ACCCAAAAAATTTATAACGC+TGG | - | chr4_2:50178424-50178443 | Msa0604540:intron | 30.0% | |
| !!! | CCCAGCGTTATAAATTTTTT+GGG | + | chr4_2:50178428-50178447 | None:intergenic | 30.0% |
| CCCAAAAAATTTATAACGCT+GGG | - | chr4_2:50178425-50178444 | Msa0604540:intron | 30.0% | |
| !!! | ACCCAGCGTTATAAATTTTT+TGG | + | chr4_2:50178429-50178448 | None:intergenic | 30.0% |
| ! | TTTTCGGATAGATATTAAGG+GGG | + | chr4_2:50178454-50178473 | None:intergenic | 30.0% |
| GAGTTAGAATGATTTGAACT+TGG | + | chr4_2:50178881-50178900 | None:intergenic | 30.0% | |
| TTTGAATCTTGAAGACTTTG+GGG | + | chr4_2:50178917-50178936 | None:intergenic | 30.0% | |
| CTTTGAATCTTGAAGACTTT+GGG | + | chr4_2:50178918-50178937 | None:intergenic | 30.0% | |
| TCTTTGAATCTTGAAGACTT+TGG | + | chr4_2:50178919-50178938 | None:intergenic | 30.0% | |
| AATAGAGAAAATAGAGTGAC+AGG | - | chr4_2:50179128-50179147 | Msa0604540:intron | 30.0% | |
| ATAGAGAAAATAGAGTGACA+GGG | - | chr4_2:50179129-50179148 | Msa0604540:intron | 30.0% | |
| !! | CTAAGAGGTATTCATTCATT+TGG | + | chr4_2:50179242-50179261 | None:intergenic | 30.0% |
| CTTACACATGTCAGAATAAA+AGG | + | chr4_2:50179348-50179367 | None:intergenic | 30.0% | |
| ! | CAAATTCTGAGAATGTTAAC+TGG | - | chr4_2:50179665-50179684 | Msa0604540:CDS | 30.0% |
| ACTCCAAGAAACACAATAAA+GGG | + | chr4_2:50179761-50179780 | None:intergenic | 30.0% | |
| !!! | CTAGTTTTAATTGTGAACCA+GGG | + | chr4_2:50179894-50179913 | None:intergenic | 30.0% |
| !!! | ACTAGTTTTAATTGTGAACC+AGG | + | chr4_2:50179895-50179914 | None:intergenic | 30.0% |
| ! | TATGATTCTGTGGTGTTAAT+TGG | - | chr4_2:50179917-50179936 | Msa0604540:intron | 30.0% |
| ATGGAAAAAAAGAAGCAAAG+TGG | + | chr4_2:50179965-50179984 | None:intergenic | 30.0% | |
| ! | TTTTCCATGAAGAATGTATG+GGG | - | chr4_2:50179977-50179996 | Msa0604540:intron | 30.0% |
| ! | CTCAACTATTTTCTTTTTGG+GGG | - | chr4_2:50180015-50180034 | Msa0604540:intron | 30.0% |
| !! | TATTTTCTTTTTGGGGGATA+TGG | - | chr4_2:50180021-50180040 | Msa0604540:intron | 30.0% |
| ACATGTGATGAAATGACTAA+AGG | - | chr4_2:50180118-50180137 | Msa0604540:intron | 30.0% | |
| CATGTGATGAAATGACTAAA+GGG | - | chr4_2:50180119-50180138 | Msa0604540:intron | 30.0% | |
| ! | GATAGTTTATGCTAGTTCTT+AGG | - | chr4_2:50180367-50180386 | Msa0604540:intron | 30.0% |
| !! | GGAACGGATTAGTAAAAAAA+GGG | - | chr4_2:50180402-50180421 | Msa0604540:intron | 30.0% |
| !! | GAACGGATTAGTAAAAAAAG+GGG | - | chr4_2:50180403-50180422 | Msa0604540:intron | 30.0% |
| ! | ATCTAGAATCTTGCTAAAGT+AGG | - | chr4_2:50180435-50180454 | Msa0604540:intron | 30.0% |
| ! | TCTAGAATCTTGCTAAAGTA+GGG | - | chr4_2:50180436-50180455 | Msa0604540:intron | 30.0% |
| CAGAACAAGATATCAATGAA+AGG | - | chr4_2:50180523-50180542 | Msa0604540:CDS | 30.0% | |
| ATCTGAAGAGAAAATTGAAG+AGG | - | chr4_2:50180661-50180680 | Msa0604540:intron | 30.0% | |
| AAATTGAAGAGGATGAGAAA+TGG | - | chr4_2:50180672-50180691 | Msa0604540:intron | 30.0% | |
| AACCTAGCAAAAATTACCTT+TGG | - | chr4_2:50180844-50180863 | Msa0604540:intron | 30.0% | |
| ! | TACCAAAGGTAATTTTTGCT+AGG | + | chr4_2:50180849-50180868 | None:intergenic | 30.0% |
| ACAAACAGTTGTCATTAGTT+TGG | + | chr4_2:50180919-50180938 | None:intergenic | 30.0% | |
| ATGATAGAATGCATTATGGA+AGG | - | chr4_2:50181070-50181089 | Msa0604540:intron | 30.0% | |
| ! | GTATCGGTAATAAATCAAGA+AGG | - | chr4_2:50181103-50181122 | Msa0604540:CDS | 30.0% |
| TGCAAAAATTAGCAAGTAAG+TGG | + | chr4_2:50181206-50181225 | None:intergenic | 30.0% | |
| ! | TTTTATGACTAAACTGAACC+TGG | - | chr4_2:50181234-50181253 | Msa0604540:intron | 30.0% |
| TACATCATATATTAGGGCTA+TGG | - | chr4_2:50181284-50181303 | Msa0604540:intron | 30.0% | |
| AGCTAATAGTGAAAAAATGG+TGG | + | chr4_2:50181489-50181508 | None:intergenic | 30.0% | |
| TTGAGTCCCATGAATTTATT+TGG | - | chr4_2:50181518-50181537 | Msa0604540:intron | 30.0% | |
| TTATGTGGATCACACTATTT+CGG | + | chr4_2:50181553-50181572 | None:intergenic | 30.0% | |
| CATTTGCAAAGATAAAACCA+AGG | + | chr4_2:50181889-50181908 | None:intergenic | 30.0% | |
| !! | GGGTATATATATTTTGGGAA+TGG | - | chr4_2:50182042-50182061 | Msa0604540:CDS | 30.0% |
| !! | GAGAAATATGATAAGTTGGT+AGG | + | chr4_2:50182236-50182255 | None:intergenic | 30.0% |
| GGTTGAGAAATATGATAAGT+TGG | + | chr4_2:50182240-50182259 | None:intergenic | 30.0% | |
| GTCTAGTTACTAGATTGTTA+AGG | - | chr4_2:50182273-50182292 | Msa0604540:intron | 30.0% | |
| CTTGACAAATTTGTATCCTT+TGG | + | chr4_2:50182321-50182340 | None:intergenic | 30.0% | |
| CAAAACATACAGTTAGTGTA+AGG | - | chr4_2:50182434-50182453 | Msa0604540:intron | 30.0% | |
| TGTGATTAATCACAATCTTC+AGG | - | chr4_2:50182524-50182543 | Msa0604540:intron | 30.0% | |
| GTGATTAATCACAATCTTCA+GGG | - | chr4_2:50182525-50182544 | Msa0604540:intron | 30.0% | |
| ! | TATTTTCAGTAGATGGTTAG+TGG | + | chr4_2:50182637-50182656 | None:intergenic | 30.0% |
| ! | TTTTTGTACCGTCAAATAAG+TGG | + | chr4_2:50182665-50182684 | None:intergenic | 30.0% |
| !!! | CTACACGTTTGATGATTTTT+TGG | + | chr4_2:50182699-50182718 | None:intergenic | 30.0% |
| !! | ATTGATGTTTCTTTTGAAGG+TGG | - | chr4_2:50182965-50182984 | Msa0604540:intron | 30.0% |
| GTTGAATAAACTGAGAAGTA+TGG | - | chr4_2:50183093-50183112 | Msa0604540:intron | 30.0% | |
| TATATGCTTCCAACATTACT+TGG | + | chr4_2:50183128-50183147 | None:intergenic | 30.0% | |
| TAACTTATCGTTGTACTCTA+TGG | - | chr4_2:50183226-50183245 | Msa0604540:intron | 30.0% | |
| CAAACCTTAAACATTGTCTC+AGG | - | chr4_2:50174386-50174405 | Msa0604540:three_prime_UTR | 35.0% | |
| GGTCAATAATTGTTTCAGTC+AGG | - | chr4_2:50174651-50174670 | Msa0604540:CDS | 35.0% | |
| AAGTACACATGCATGAAAGA+GGG | + | chr4_2:50174768-50174787 | None:intergenic | 35.0% | |
| AAAGTACACATGCATGAAAG+AGG | + | chr4_2:50174769-50174788 | None:intergenic | 35.0% | |
| ! | ATTGGGTTTTTGTGTGTATG+TGG | - | chr4_2:50174803-50174822 | Msa0604540:intron | 35.0% |
| ATGTGGAAATTGATACCAGA+AGG | - | chr4_2:50174820-50174839 | Msa0604540:intron | 35.0% | |
| TGTGGAAATTGATACCAGAA+GGG | - | chr4_2:50174821-50174840 | Msa0604540:intron | 35.0% | |
| ! | ATTGATACCAGAAGGGTTTT+AGG | - | chr4_2:50174828-50174847 | Msa0604540:intron | 35.0% |
| CATTGGATAGAACAACAACA+TGG | - | chr4_2:50174861-50174880 | Msa0604540:intron | 35.0% | |
| ! | TCAGGTGTTTCTACAACATT+TGG | - | chr4_2:50174921-50174940 | Msa0604540:intron | 35.0% |
| AAGAAGAAAACACACCTGTT+TGG | + | chr4_2:50175016-50175035 | None:intergenic | 35.0% | |
| TTTAAACAACCTTCGATCTG+CGG | - | chr4_2:50175279-50175298 | Msa0604540:intron | 35.0% | |
| TATTATTAACCGCAGATCGA+AGG | + | chr4_2:50175291-50175310 | None:intergenic | 35.0% | |
| TTTGACATACTTAGCTCAAG+AGG | - | chr4_2:50175311-50175330 | Msa0604540:intron | 35.0% | |
| ! | GTTTTTGACGTTCGGTTTTT+AGG | - | chr4_2:50175510-50175529 | Msa0604540:intron | 35.0% |
| !! | AATGGCAGATATTCTAGTTC+TGG | + | chr4_2:50175583-50175602 | None:intergenic | 35.0% |
| !!! | CGAATTTTGCAAGTTGATTG+TGG | - | chr4_2:50175606-50175625 | Msa0604540:intron | 35.0% |
| CAGCTATCATTGACAGAAAA+AGG | - | chr4_2:50175706-50175725 | Msa0604540:intron | 35.0% | |
| AGGACAGAAACTTTCGATAT+GGG | + | chr4_2:50175802-50175821 | None:intergenic | 35.0% | |
| AAGGACAGAAACTTTCGATA+TGG | + | chr4_2:50175803-50175822 | None:intergenic | 35.0% | |
| ! | CTGTTGAGACTTCAGAATTT+TGG | + | chr4_2:50175921-50175940 | None:intergenic | 35.0% |
| ! | GAAGATAGACTTTTGCAAGT+CGG | - | chr4_2:50176009-50176028 | Msa0604540:intron | 35.0% |
| ! | AAGATAGACTTTTGCAAGTC+GGG | - | chr4_2:50176010-50176029 | Msa0604540:intron | 35.0% |
| TTATTACGAAAAGATCGCAG+TGG | - | chr4_2:50176071-50176090 | Msa0604540:intron | 35.0% | |
| ! | AGTGATGATGTCAATCACAA+AGG | - | chr4_2:50176200-50176219 | Msa0604540:intron | 35.0% |
| ! | AGCTGATGATTTGTGTACTA+TGG | - | chr4_2:50176443-50176462 | Msa0604540:intron | 35.0% |
| ! | TGATTTGTGTACTATGGTAC+AGG | - | chr4_2:50176449-50176468 | Msa0604540:CDS | 35.0% |
| CTTTCAATTACATCCTTGAG+GGG | + | chr4_2:50176602-50176621 | None:intergenic | 35.0% | |
| CCTTTCAATTACATCCTTGA+GGG | + | chr4_2:50176603-50176622 | None:intergenic | 35.0% | |
| ACCTTTCAATTACATCCTTG+AGG | + | chr4_2:50176604-50176623 | None:intergenic | 35.0% | |
| !!! | TGTTATCGTTTTGCTATTGG+CGG | - | chr4_2:50176634-50176653 | Msa0604540:CDS | 35.0% |
| GGCCTCATTATCTTATCAAT+GGG | + | chr4_2:50176705-50176724 | None:intergenic | 35.0% | |
| AGGCCTCATTATCTTATCAA+TGG | + | chr4_2:50176706-50176725 | None:intergenic | 35.0% | |
| TAGTAGTGAGTGACACATTA+AGG | + | chr4_2:50176785-50176804 | None:intergenic | 35.0% | |
| GAATGATGTCTCCTGTAATT+AGG | - | chr4_2:50176948-50176967 | Msa0604540:intron | 35.0% | |
| ATGTGCATATCCCTAATTAC+AGG | + | chr4_2:50176962-50176981 | None:intergenic | 35.0% | |
| AACAACCAACAAATACACCA+AGG | + | chr4_2:50176993-50177012 | None:intergenic | 35.0% | |
| ! | TGGTGTATTTGTTGGTTGTT+TGG | - | chr4_2:50176993-50177012 | Msa0604540:intron | 35.0% |
| !!! | CTTTTTTTGCATAGCTTGCA+AGG | - | chr4_2:50177129-50177148 | Msa0604540:intron | 35.0% |
| !! | ATTCTGAAGTTATCTCACAG+GGG | - | chr4_2:50177223-50177242 | Msa0604540:intron | 35.0% |
| TGAGCAAACTACTGCTAAAT+TGG | + | chr4_2:50177295-50177314 | None:intergenic | 35.0% | |
| TTGACTGAAGCTCTTAAGTT+TGG | - | chr4_2:50177375-50177394 | Msa0604540:intron | 35.0% | |
| CTTTAAATACTGTAGGGACT+AGG | + | chr4_2:50177648-50177667 | None:intergenic | 35.0% | |
| ATGAGGATCCTAAATACTGT+TGG | - | chr4_2:50177737-50177756 | Msa0604540:intron | 35.0% | |
| GCTTTGATACGGACAATAAA+TGG | + | chr4_2:50177837-50177856 | None:intergenic | 35.0% | |
| ACTGTTTGTGTGATACATTG+TGG | - | chr4_2:50177911-50177930 | Msa0604540:intron | 35.0% | |
| TTTACAAGATTTGAGGGTAG+TGG | - | chr4_2:50177986-50178005 | Msa0604540:intron | 35.0% | |
| GACAGAGTCCTATATAAGTA+AGG | - | chr4_2:50178040-50178059 | Msa0604540:CDS | 35.0% | |
| GTCCTATATAAGTAAGGACT+TGG | - | chr4_2:50178046-50178065 | Msa0604540:CDS | 35.0% | |
| ATAAGTAAGGACTTGGATTC+TGG | - | chr4_2:50178053-50178072 | Msa0604540:CDS | 35.0% | |
| ATTTCAATATCACCCTCACT+TGG | + | chr4_2:50178092-50178111 | None:intergenic | 35.0% | |
| TAGACCATGTGATTCTATCA+TGG | - | chr4_2:50178148-50178167 | Msa0604540:intron | 35.0% | |
| TTGGATTTAAACTGCACAGA+TGG | + | chr4_2:50178287-50178306 | None:intergenic | 35.0% | |
| TCTGTGCAGTTTAAATCCAA+TGG | - | chr4_2:50178287-50178306 | Msa0604540:intron | 35.0% | |
| !! | ACAAATGACTCAAGCATTGA+GGG | + | chr4_2:50178695-50178714 | None:intergenic | 35.0% |
| ! | AACAAATGACTCAAGCATTG+AGG | + | chr4_2:50178696-50178715 | None:intergenic | 35.0% |
| AATAAGAAAGAGGAATGAGC+TGG | - | chr4_2:50178967-50178986 | Msa0604540:intron | 35.0% | |
| ACATGCATAGCTACTGAAAT+GGG | + | chr4_2:50179050-50179069 | None:intergenic | 35.0% | |
| TTGACAAAAAGGTGATGAAC+AGG | - | chr4_2:50179168-50179187 | Msa0604540:intron | 35.0% | |
| TGACAAAAAGGTGATGAACA+GGG | - | chr4_2:50179169-50179188 | Msa0604540:intron | 35.0% | |
| TGAATACCTCTTAGTTACAG+TGG | - | chr4_2:50179248-50179267 | Msa0604540:intron | 35.0% | |
| ! | GAGTTGGTTGAGTTAGTTAT+TGG | + | chr4_2:50179326-50179345 | None:intergenic | 35.0% |
| CATGTCAGAATAAAAGGAGT+TGG | + | chr4_2:50179342-50179361 | None:intergenic | 35.0% | |
| AAAGCAGAATACTACTGTCA+TGG | + | chr4_2:50179464-50179483 | None:intergenic | 35.0% | |
| AAACAAAGAACACCAGTGTA+AGG | + | chr4_2:50179699-50179718 | None:intergenic | 35.0% | |
| !!! | TGTTCTTTGTTTTGCTTCCT+GGG | - | chr4_2:50179707-50179726 | Msa0604540:CDS | 35.0% |
| ACTGATAGAATAATGAACCC+AGG | + | chr4_2:50179727-50179746 | None:intergenic | 35.0% | |
| TCTCCCTTTATTGTGTTTCT+TGG | - | chr4_2:50179755-50179774 | Msa0604540:intron | 35.0% | |
| CACTCCAAGAAACACAATAA+AGG | + | chr4_2:50179762-50179781 | None:intergenic | 35.0% | |
| AAACTAGTCGTATGATTCTG+TGG | - | chr4_2:50179907-50179926 | Msa0604540:intron | 35.0% | |
| ! | TTCTGTGGTGTTAATTGGTA+AGG | - | chr4_2:50179922-50179941 | Msa0604540:intron | 35.0% |
| ACAAATGTTCTTTGAGCGTA+AGG | - | chr4_2:50180067-50180086 | Msa0604540:intron | 35.0% | |
| ! | CTTTGGGTTAAAGAGAGTAA+AGG | - | chr4_2:50180190-50180209 | Msa0604540:intron | 35.0% |
| AGTTCTTAGGCACTTAAAAC+AGG | - | chr4_2:50180380-50180399 | Msa0604540:intron | 35.0% | |
| GTTCTTAGGCACTTAAAACA+GGG | - | chr4_2:50180381-50180400 | Msa0604540:intron | 35.0% | |
| !! | GGGAACGGATTAGTAAAAAA+AGG | - | chr4_2:50180401-50180420 | Msa0604540:intron | 35.0% |
| TAGACTTAACATGAGTGATG+AGG | - | chr4_2:50180604-50180623 | Msa0604540:intron | 35.0% | |
| ATACCTATTGTGGTATGCAA+AGG | - | chr4_2:50180725-50180744 | Msa0604540:intron | 35.0% | |
| TACCTATTGTGGTATGCAAA+GGG | - | chr4_2:50180726-50180745 | Msa0604540:intron | 35.0% | |
| !! | TTTTGCTAGGTTCTAGCAAA+TGG | + | chr4_2:50180836-50180855 | None:intergenic | 35.0% |
| AGGGAAAAAGAAGAGGAAAA+GGG | + | chr4_2:50180886-50180905 | None:intergenic | 35.0% | |
| CTAGGACAAAGAGTAAATGT+AGG | + | chr4_2:50180976-50180995 | None:intergenic | 35.0% | |
| TCTTGTTGATACACGTAGAT+GGG | - | chr4_2:50181029-50181048 | Msa0604540:intron | 35.0% | |
| GTAATAAATCAAGAAGGGAC+AGG | - | chr4_2:50181109-50181128 | Msa0604540:CDS | 35.0% | |
| ACAAATCTTTCCTCTTAAGG+GGG | + | chr4_2:50181150-50181169 | None:intergenic | 35.0% | |
| GACAAATCTTTCCTCTTAAG+GGG | + | chr4_2:50181151-50181170 | None:intergenic | 35.0% | |
| CGACAAATCTTTCCTCTTAA+GGG | + | chr4_2:50181152-50181171 | None:intergenic | 35.0% | |
| CCTTAAGAGGAAAGATTTGT+CGG | - | chr4_2:50181150-50181169 | Msa0604540:CDS | 35.0% | |
| !!! | CTGTATAGTTTTGTTCACAC+AGG | - | chr4_2:50181307-50181326 | Msa0604540:intron | 35.0% |
| ! | AAAAATGGTGGAAAGAGTGT+TGG | + | chr4_2:50181477-50181496 | None:intergenic | 35.0% |
| ! | TTTTCTTTGTTAAACAGCCC+CGG | + | chr4_2:50181841-50181860 | None:intergenic | 35.0% |
| ATGTCAAGTAAGTCATGTTC+TGG | + | chr4_2:50182113-50182132 | None:intergenic | 35.0% | |
| TCTAGATCCTGCAAGATAAA+GGG | + | chr4_2:50182186-50182205 | None:intergenic | 35.0% | |
| ATCTAGATCCTGCAAGATAA+AGG | + | chr4_2:50182187-50182206 | None:intergenic | 35.0% | |
| TTTATCTTGCAGGATCTAGA+TGG | - | chr4_2:50182186-50182205 | Msa0604540:intron | 35.0% | |
| ! | TTTTGCTGCAATAAACTGAG+TGG | - | chr4_2:50182400-50182419 | Msa0604540:intron | 35.0% |
| AATAAACTGAGTGGTTAACG+CGG | - | chr4_2:50182409-50182428 | Msa0604540:intron | 35.0% | |
| ATACAGTTAGTGTAAGGTTG+AGG | - | chr4_2:50182440-50182459 | Msa0604540:intron | 35.0% | |
| GTAAGGTTGAGGAATATACT+AGG | - | chr4_2:50182451-50182470 | Msa0604540:intron | 35.0% | |
| AACTTCATTAACCACGAACT+TGG | - | chr4_2:50182500-50182519 | Msa0604540:intron | 35.0% | |
| ATTAATCACATCCAAGTTCG+TGG | + | chr4_2:50182514-50182533 | None:intergenic | 35.0% | |
| AAGTTTAAGTGTTCCGATGA+GGG | - | chr4_2:50183019-50183038 | Msa0604540:intron | 35.0% | |
| ATAAATGCATGCTTCTGTAG+TGG | - | chr4_2:50183145-50183164 | Msa0604540:intron | 35.0% | |
| TGACTAATTCGCATTTCACA+TGG | + | chr4_2:50183264-50183283 | None:intergenic | 35.0% | |
| AACATTGAAGCCAACCAAAC+AGG | - | chr4_2:50174348-50174367 | Msa0604540:three_prime_UTR | 40.0% | |
| TTGAACTGAACCTGTTTGGT+TGG | + | chr4_2:50174361-50174380 | None:intergenic | 40.0% | |
| ACCAAACAGGTTCAGTTCAA+AGG | - | chr4_2:50174361-50174380 | Msa0604540:three_prime_UTR | 40.0% | |
| ACCTTTGAACTGAACCTGTT+TGG | + | chr4_2:50174365-50174384 | None:intergenic | 40.0% | |
| CTGAAAACCTAAAACCCTTC+TGG | + | chr4_2:50174838-50174857 | None:intergenic | 40.0% | |
| ATTGCTGCCAGAAAAAGCTT+CGG | - | chr4_2:50174951-50174970 | Msa0604540:intron | 40.0% | |
| ACAGCAAGTAATTGCCAAAC+AGG | - | chr4_2:50174999-50175018 | Msa0604540:intron | 40.0% | |
| GGTTTATTTGAACGCATTGC+TGG | - | chr4_2:50175067-50175086 | Msa0604540:intron | 40.0% | |
| !! | CATTTGGTGATGATAATGGC+AGG | + | chr4_2:50175385-50175404 | None:intergenic | 40.0% |
| TGAAGTAGAGCTCATAGATG+TGG | - | chr4_2:50175678-50175697 | Msa0604540:intron | 40.0% | |
| ATGTTCCTAATATCGAGGGA+TGG | - | chr4_2:50175776-50175795 | Msa0604540:intron | 40.0% | |
| ! | CCTTCTTGCTGTCGATTAAA+AGG | + | chr4_2:50175822-50175841 | None:intergenic | 40.0% |
| ! | CCTTTTAATCGACAGCAAGA+AGG | - | chr4_2:50175819-50175838 | Msa0604540:intron | 40.0% |
| !!! | GAGAACTGCTTTTTGCTGTT+TGG | - | chr4_2:50175841-50175860 | Msa0604540:intron | 40.0% |
| !! | TGAGACTTCAGAATTTTGGC+TGG | + | chr4_2:50175917-50175936 | None:intergenic | 40.0% |
| AACCTCCTGATTGATTGACT+GGG | + | chr4_2:50176570-50176589 | None:intergenic | 40.0% | |
| TAACCTCCTGATTGATTGAC+TGG | + | chr4_2:50176571-50176590 | None:intergenic | 40.0% | |
| GGTTATTAAAGTTCCCCTCA+AGG | - | chr4_2:50176586-50176605 | Msa0604540:CDS | 40.0% | |
| CCCTCAAGGATGTAATTGAA+AGG | - | chr4_2:50176600-50176619 | Msa0604540:CDS | 40.0% | |
| TATGCACATTCTGTGTACCT+TGG | - | chr4_2:50176973-50176992 | Msa0604540:intron | 40.0% | |
| ! | GTGTACCTTGGTGTATTTGT+TGG | - | chr4_2:50176985-50177004 | Msa0604540:intron | 40.0% |
| ! | CTAGAACTCCTTTTGACCAA+AGG | + | chr4_2:50177156-50177175 | None:intergenic | 40.0% |
| ! | TCAAAAGGAGTTCTAGCAGT+TGG | - | chr4_2:50177160-50177179 | Msa0604540:intron | 40.0% |
| ! | CTTCAGAATAAGGAAGCACA+TGG | + | chr4_2:50177212-50177231 | None:intergenic | 40.0% |
| TTATCTCACAGGGGATTTCT+AGG | - | chr4_2:50177232-50177251 | Msa0604540:intron | 40.0% | |
| ACCTGTGAGAACTGAGAATA+AGG | - | chr4_2:50177400-50177419 | Msa0604540:intron | 40.0% | |
| CCTGTGAGAACTGAGAATAA+GGG | - | chr4_2:50177401-50177420 | Msa0604540:intron | 40.0% | |
| CTGTGAGAACTGAGAATAAG+GGG | - | chr4_2:50177402-50177421 | Msa0604540:intron | 40.0% | |
| TACTGATATCATGGCACCTT+TGG | - | chr4_2:50177513-50177532 | Msa0604540:intron | 40.0% | |
| TCAACATAGACTCACACCAA+AGG | + | chr4_2:50177532-50177551 | None:intergenic | 40.0% | |
| ! | GCTTTATAGCTTGCAGTAGA+TGG | + | chr4_2:50177706-50177725 | None:intergenic | 40.0% |
| CTACTGCAAGCTATAAAGCA+AGG | - | chr4_2:50177707-50177726 | Msa0604540:intron | 40.0% | |
| AACAGGGTCCAACAGTATTT+AGG | + | chr4_2:50177748-50177767 | None:intergenic | 40.0% | |
| GCTTGCATGGTTTGAAGAAA+TGG | - | chr4_2:50177798-50177817 | Msa0604540:intron | 40.0% | |
| ! | TATAGGACTCTGTCACTTCA+GGG | + | chr4_2:50178034-50178053 | None:intergenic | 40.0% |
| ! | ATATAGGACTCTGTCACTTC+AGG | + | chr4_2:50178035-50178054 | None:intergenic | 40.0% |
| CATGAGCAGAAAGAGAACAA+TGG | - | chr4_2:50178113-50178132 | Msa0604540:intron | 40.0% | |
| GTCTCCATGATAGAATCACA+TGG | + | chr4_2:50178155-50178174 | None:intergenic | 40.0% | |
| TATCATGGAGACCCATGAAA+TGG | - | chr4_2:50178163-50178182 | Msa0604540:intron | 40.0% | |
| !! | GTATAGCATTGGTGATCTTC+TGG | + | chr4_2:50178235-50178254 | None:intergenic | 40.0% |
| CAGTTTAAATCCAATGGCTC+TGG | - | chr4_2:50178293-50178312 | Msa0604540:intron | 40.0% | |
| !! | CAAATGACTCAAGCATTGAG+GGG | + | chr4_2:50178694-50178713 | None:intergenic | 40.0% |
| CTGAATGTCATTGCTTTGAC+AGG | - | chr4_2:50178727-50178746 | Msa0604540:intron | 40.0% | |
| !! | CTATGAAGATTGACTCGACA+AGG | - | chr4_2:50178750-50178769 | Msa0604540:CDS | 40.0% |
| CACATGCATAGCTACTGAAA+TGG | + | chr4_2:50179051-50179070 | None:intergenic | 40.0% | |
| TACCTCTTAGTTACAGTGGA+TGG | - | chr4_2:50179252-50179271 | Msa0604540:intron | 40.0% | |
| ATCCATCCACTGTAACTAAG+AGG | + | chr4_2:50179257-50179276 | None:intergenic | 40.0% | |
| !!! | GTGTTCTTTGTTTTGCTTCC+TGG | - | chr4_2:50179706-50179725 | Msa0604540:CDS | 40.0% |
| ! | AGCAGATCTGATGCTAGTTT+AGG | - | chr4_2:50179837-50179856 | Msa0604540:intron | 40.0% |
| ! | TCTGATGCTAGTTTAGGCAT+TGG | - | chr4_2:50179843-50179862 | Msa0604540:intron | 40.0% |
| !! | CTAGTTTAGGCATTGGTTAC+TGG | - | chr4_2:50179850-50179869 | Msa0604540:intron | 40.0% |
| TTCTAATATGCACTTTGCCC+TGG | - | chr4_2:50179874-50179893 | Msa0604540:intron | 40.0% | |
| GGTGTTAATTGGTAAGGCAT+TGG | - | chr4_2:50179928-50179947 | Msa0604540:intron | 40.0% | |
| CATGAAGAATGTATGGGGTT+GGG | - | chr4_2:50179982-50180001 | Msa0604540:intron | 40.0% | |
| !! | TTTCTTTTTGGGGGATATGG+TGG | - | chr4_2:50180024-50180043 | Msa0604540:intron | 40.0% |
| AGTATAGCCAAAGCAACACT+AGG | - | chr4_2:50180148-50180167 | Msa0604540:intron | 40.0% | |
| !!! | AGAGTAAAGGTTTTTGGTCG+TGG | - | chr4_2:50180203-50180222 | Msa0604540:intron | 40.0% |
| !!! | GAGTAAAGGTTTTTGGTCGT+GGG | - | chr4_2:50180204-50180223 | Msa0604540:intron | 40.0% |
| !!! | AGTAAAGGTTTTTGGTCGTG+GGG | - | chr4_2:50180205-50180224 | Msa0604540:intron | 40.0% |
| AGCTAAGCAAGACAACAAGA+AGG | - | chr4_2:50180319-50180338 | Msa0604540:intron | 40.0% | |
| TAGGCACTTAAAACAGGGAA+CGG | - | chr4_2:50180386-50180405 | Msa0604540:intron | 40.0% | |
| CAAGAGACTTGAACTAGTTG+AGG | - | chr4_2:50180468-50180487 | Msa0604540:intron | 40.0% | |
| TTGAACTAGTTGAGGTGCAT+TGG | - | chr4_2:50180476-50180495 | Msa0604540:CDS | 40.0% | |
| AACCCTTTGCATACCACAAT+AGG | + | chr4_2:50180731-50180750 | None:intergenic | 40.0% | |
| ATTGTGGTATGCAAAGGGTT+AGG | - | chr4_2:50180731-50180750 | Msa0604540:intron | 40.0% | |
| AAGAAGAGGAAAAGGGAGTT+GGG | + | chr4_2:50180879-50180898 | None:intergenic | 40.0% | |
| AAAGAAGAGGAAAAGGGAGT+TGG | + | chr4_2:50180880-50180899 | None:intergenic | 40.0% | |
| GAGGGAAAAAGAAGAGGAAA+AGG | + | chr4_2:50180887-50180906 | None:intergenic | 40.0% | |
| !! | TTAGAGAATGGGTTAGTCAG+AGG | + | chr4_2:50180947-50180966 | None:intergenic | 40.0% |
| GTAGGTCTGAGTTAGAGAAT+GGG | + | chr4_2:50180958-50180977 | None:intergenic | 40.0% | |
| TGTAGGTCTGAGTTAGAGAA+TGG | + | chr4_2:50180959-50180978 | None:intergenic | 40.0% | |
| ! | GTCTTGTTGATACACGTAGA+TGG | - | chr4_2:50181028-50181047 | Msa0604540:intron | 40.0% |
| ATAAATCAAGAAGGGACAGG+TGG | - | chr4_2:50181112-50181131 | Msa0604540:CDS | 40.0% | |
| CCGACAAATCTTTCCTCTTA+AGG | + | chr4_2:50181153-50181172 | None:intergenic | 40.0% | |
| TAAGAGGAAAGATTTGTCGG+AGG | - | chr4_2:50181153-50181172 | Msa0604540:CDS | 40.0% | |
| CTAAACTGAACCTGGAAACA+TGG | - | chr4_2:50181242-50181261 | Msa0604540:intron | 40.0% | |
| !! | TTTCTTGGAAGCATTGTTGC+TGG | - | chr4_2:50181349-50181368 | Msa0604540:intron | 40.0% |
| GGATCACACTATTTCGGATA+TGG | + | chr4_2:50181547-50181566 | None:intergenic | 40.0% | |
| ACCAATAGTAGAGATAGTGC+CGG | - | chr4_2:50181579-50181598 | Msa0604540:intron | 40.0% | |
| TAGTTGTCTGGGTGTGAATA+GGG | + | chr4_2:50181733-50181752 | None:intergenic | 40.0% | |
| TTAGTTGTCTGGGTGTGAAT+AGG | + | chr4_2:50181734-50181753 | None:intergenic | 40.0% | |
| TCTGCCGAAGTCTTGAATTA+TGG | - | chr4_2:50181762-50181781 | Msa0604540:CDS | 40.0% | |
| GCCTCCATAATTCAAGACTT+CGG | + | chr4_2:50181769-50181788 | None:intergenic | 40.0% | |
| !!! | ATTTTTTTTCTTCGAGGGGC+CGG | - | chr4_2:50181819-50181838 | Msa0604540:CDS | 40.0% |
| TTCATATATGCATGCGTCCT+TGG | - | chr4_2:50181869-50181888 | Msa0604540:CDS | 40.0% | |
| ACTATGTTTGAAGGCTTGCA+CGG | + | chr4_2:50181952-50181971 | None:intergenic | 40.0% | |
| ! | TTTCCTTGTGTGACCGTTTT+CGG | - | chr4_2:50182021-50182040 | Msa0604540:CDS | 40.0% |
| TAGAACTCCCTTTATCTTGC+AGG | - | chr4_2:50182176-50182195 | Msa0604540:intron | 40.0% | |
| AACTAGACAGTCTTACCGTT+TGG | + | chr4_2:50182261-50182280 | None:intergenic | 40.0% | |
| TTTCAGTAGATGGTTAGTGG+AGG | + | chr4_2:50182634-50182653 | None:intergenic | 40.0% | |
| TGCTGACAGATTCTACATCT+AGG | + | chr4_2:50182758-50182777 | None:intergenic | 40.0% | |
| ! | ATAGGAAGTGCAACGATAAG+TGG | + | chr4_2:50182871-50182890 | None:intergenic | 40.0% |
| CAAGTTTAAGTGTTCCGATG+AGG | - | chr4_2:50183018-50183037 | Msa0604540:intron | 40.0% | |
| TCAAGCTGTATTGCAGTGAT+TGG | - | chr4_2:50183285-50183304 | Msa0604540:intron | 40.0% | |
| ! | TATTGACCCTCTGGTTCCAA+AGG | - | chr4_2:50174600-50174619 | Msa0604540:CDS | 45.0% |
| ! | ATTGACCCTCTGGTTCCAAA+GGG | - | chr4_2:50174601-50174620 | Msa0604540:CDS | 45.0% |
| ! | CCAAAGGGGTTCTGATAATC+CGG | - | chr4_2:50174616-50174635 | Msa0604540:CDS | 45.0% |
| ! | GGTTCTGATAATCCGGAGTT+CGG | - | chr4_2:50174623-50174642 | Msa0604540:CDS | 45.0% |
| ATCAGATGTGTGTCCAACTG+AGG | - | chr4_2:50174891-50174910 | Msa0604540:intron | 45.0% | |
| TCCAACTGAGGATGCAATTC+AGG | - | chr4_2:50174903-50174922 | Msa0604540:intron | 45.0% | |
| ACCTGAATTGCATCCTCAGT+TGG | + | chr4_2:50174907-50174926 | None:intergenic | 45.0% | |
| !! | GAAGCTTTTTCTGGCAGCAA+TGG | + | chr4_2:50174952-50174971 | None:intergenic | 45.0% |
| !! | TCTCGAACCGAAGCTTTTTC+TGG | + | chr4_2:50174961-50174980 | None:intergenic | 45.0% |
| !! | ACTTGCTGTTGAGAAGCTGT+GGG | + | chr4_2:50174988-50175007 | None:intergenic | 45.0% |
| !! | TACTTGCTGTTGAGAAGCTG+TGG | + | chr4_2:50174989-50175008 | None:intergenic | 45.0% |
| ! | CGATCGGTTTCATTCCATTC+GGG | + | chr4_2:50175236-50175255 | None:intergenic | 45.0% |
| ! | CCGATCGGTTTCATTCCATT+CGG | + | chr4_2:50175237-50175256 | None:intergenic | 45.0% |
| CCGAATGGAATGAAACCGAT+CGG | - | chr4_2:50175234-50175253 | Msa0604540:intron | 45.0% | |
| !!! | GTTCTGGATGCTGTTTTCTG+TGG | + | chr4_2:50175567-50175586 | None:intergenic | 45.0% |
| !! | GCAAGTTGATTGTGGTTCTG+AGG | - | chr4_2:50175614-50175633 | Msa0604540:intron | 45.0% |
| !!! | GACTTCAGAATTTTGGCTGG+AGG | + | chr4_2:50175914-50175933 | None:intergenic | 45.0% |
| !! | TTGCTATTGGCGGATTACTC+AGG | - | chr4_2:50176644-50176663 | Msa0604540:CDS | 45.0% |
| ACTCAGGTCTCAAGGATGAA+TGG | - | chr4_2:50176660-50176679 | Msa0604540:intron | 45.0% | |
| TAATGAGGCCTGTTTCCGTA+AGG | - | chr4_2:50176715-50176734 | Msa0604540:intron | 45.0% | |
| GATTCCACTGGAATGCCTTA+CGG | + | chr4_2:50176733-50176752 | None:intergenic | 45.0% | |
| TGCAAGGTCCTTTGGTCAAA+AGG | - | chr4_2:50177145-50177164 | Msa0604540:intron | 45.0% | |
| ACATGGAAGTAAACCACCAC+AGG | + | chr4_2:50177195-50177214 | None:intergenic | 45.0% | |
| CCCTTATTCTCAGTTCTCAC+AGG | + | chr4_2:50177404-50177423 | None:intergenic | 45.0% | |
| CTCGTACAGTCTCACTTGTA+TGG | - | chr4_2:50177769-50177788 | Msa0604540:intron | 45.0% | |
| AATAGCATTGCCAGAGCCAT+TGG | + | chr4_2:50178306-50178325 | None:intergenic | 45.0% | |
| TGGCAATGCTATTCAGGTCT+GGG | - | chr4_2:50178313-50178332 | Msa0604540:intron | 45.0% | |
| ACAAGGATGCTCAACGGTAA+AGG | - | chr4_2:50178767-50178786 | Msa0604540:CDS | 45.0% | |
| GAGAAAATAGAGTGACAGGG+TGG | - | chr4_2:50179132-50179151 | Msa0604540:intron | 45.0% | |
| GGAAAGAGCAATAGCTCAGT+CGG | + | chr4_2:50179221-50179240 | None:intergenic | 45.0% | |
| ! | TCACCTATTGACTGCTCTCT+CGG | - | chr4_2:50179486-50179505 | Msa0604540:CDS | 45.0% |
| CTCTCTCGGTCATACATTAC+TGG | - | chr4_2:50179500-50179519 | Msa0604540:CDS | 45.0% | |
| CTGGTATGCTTTCCTTACAC+TGG | - | chr4_2:50179684-50179703 | Msa0604540:CDS | 45.0% | |
| CCAACCCCATACATTCTTCA+TGG | + | chr4_2:50179984-50180003 | None:intergenic | 45.0% | |
| CCATGAAGAATGTATGGGGT+TGG | - | chr4_2:50179981-50180000 | Msa0604540:intron | 45.0% | |
| !! | CACTTCTCCTAGTGTTGCTT+TGG | + | chr4_2:50180158-50180177 | None:intergenic | 45.0% |
| AGCAACACTAGGAGAAGTGA+AGG | - | chr4_2:50180159-50180178 | Msa0604540:intron | 45.0% | |
| GCAACACTAGGAGAAGTGAA+GGG | - | chr4_2:50180160-50180179 | Msa0604540:intron | 45.0% | |
| CAACACTAGGAGAAGTGAAG+GGG | - | chr4_2:50180161-50180180 | Msa0604540:intron | 45.0% | |
| AAGTGAAGGGGTTTCAGCTT+TGG | - | chr4_2:50180173-50180192 | Msa0604540:intron | 45.0% | |
| AGTGAAGGGGTTTCAGCTTT+GGG | - | chr4_2:50180174-50180193 | Msa0604540:intron | 45.0% | |
| !! | AGGTGCATTGGTGACGAAAA+GGG | - | chr4_2:50180488-50180507 | Msa0604540:CDS | 45.0% |
| CAGTTGGAGGGAAAAAGAAG+AGG | + | chr4_2:50180893-50180912 | None:intergenic | 45.0% | |
| ! | TTAGTTTGGTCGCAGTTGGA+GGG | + | chr4_2:50180905-50180924 | None:intergenic | 45.0% |
| ! | ATTAGTTTGGTCGCAGTTGG+AGG | + | chr4_2:50180906-50180925 | None:intergenic | 45.0% |
| ! | GTCATTAGTTTGGTCGCAGT+TGG | + | chr4_2:50180909-50180928 | None:intergenic | 45.0% |
| GGAAGGCTGCAATGATGTAT+CGG | - | chr4_2:50181087-50181106 | Msa0604540:intron | 45.0% | |
| AATCTTTCCTCTTAAGGGGG+AGG | + | chr4_2:50181147-50181166 | None:intergenic | 45.0% | |
| ATGCATCGAACCATGTTTCC+AGG | + | chr4_2:50181255-50181274 | None:intergenic | 45.0% | |
| ACCGGCACTATCTCTACTAT+TGG | + | chr4_2:50181583-50181602 | None:intergenic | 45.0% | |
| !! | AGGAGAATGAGAAGTGCTAC+CGG | + | chr4_2:50181601-50181620 | None:intergenic | 45.0% |
| GCCGAAGTCTTGAATTATGG+AGG | - | chr4_2:50181765-50181784 | Msa0604540:CDS | 45.0% | |
| !!! | TTTTTTTTCTTCGAGGGGCC+GGG | - | chr4_2:50181820-50181839 | Msa0604540:CDS | 45.0% |
| ! | TTCCTTGTGTGACCGTTTTC+GGG | - | chr4_2:50182022-50182041 | Msa0604540:CDS | 45.0% |
| TGGTTAGTGGAGGATATACC+AGG | + | chr4_2:50182624-50182643 | None:intergenic | 45.0% | |
| TCTCTTGCTTCAAGAGGAGT+GGG | + | chr4_2:50183055-50183074 | None:intergenic | 45.0% | |
| TTCTCTTGCTTCAAGAGGAG+TGG | + | chr4_2:50183056-50183075 | None:intergenic | 45.0% | |
| ! | GCTGATTCTCTTGCTTCAAG+AGG | + | chr4_2:50183061-50183080 | None:intergenic | 45.0% |
| CATGAAGTCATGCTGAGAAC+TGG | + | chr4_2:50183318-50183337 | None:intergenic | 45.0% | |
| !!! | AATTTAAAATATAAATATGT+TGG | - | chr4_2:50181414-50181433 | Msa0604540:intron | 5.0% |
| !!! | ATTTAAAATATAAATATGTT+GGG | - | chr4_2:50181415-50181434 | Msa0604540:intron | 5.0% |
| ! | TTGACCCTCTGGTTCCAAAG+GGG | - | chr4_2:50174602-50174621 | Msa0604540:CDS | 50.0% |
| !! | AGAACCCCTTTGGAACCAGA+GGG | + | chr4_2:50174609-50174628 | None:intergenic | 50.0% |
| CCGGATTATCAGAACCCCTT+TGG | + | chr4_2:50174619-50174638 | None:intergenic | 50.0% | |
| !! | ATAATCCGGAGTTCGGTGTC+TGG | - | chr4_2:50174630-50174649 | Msa0604540:CDS | 50.0% |
| ATTGACCAGACACCGAACTC+CGG | + | chr4_2:50174638-50174657 | None:intergenic | 50.0% | |
| !! | GGTTCTGAGGCCACCTTTAT+TGG | - | chr4_2:50175627-50175646 | Msa0604540:intron | 50.0% |
| ATGGGCCATCCCTCGATATT+AGG | + | chr4_2:50175784-50175803 | None:intergenic | 50.0% | |
| ! | GCTGTTTGGTTCCATCACTG+AGG | - | chr4_2:50175855-50175874 | Msa0604540:intron | 50.0% |
| ! | GTTTGGTTCCATCACTGAGG+AGG | - | chr4_2:50175858-50175877 | Msa0604540:intron | 50.0% |
| GTTCCATCACTGAGGAGGTA+TGG | - | chr4_2:50175863-50175882 | Msa0604540:intron | 50.0% | |
| AGTCGGGTATTCTGCTGTGA+AGG | - | chr4_2:50176026-50176045 | Msa0604540:intron | 50.0% | |
| GTGCTCCCAGTCAATCAATC+AGG | - | chr4_2:50176562-50176581 | Msa0604540:CDS | 50.0% | |
| CTCCCAGTCAATCAATCAGG+AGG | - | chr4_2:50176565-50176584 | Msa0604540:CDS | 50.0% | |
| CTGGAATGCCTTACGGAAAC+AGG | + | chr4_2:50176726-50176745 | None:intergenic | 50.0% | |
| ! | GTTTCCGTAAGGCATTCCAG+TGG | - | chr4_2:50176726-50176745 | Msa0604540:intron | 50.0% |
| ! | GCATAGCTTGCAAGGTCCTT+TGG | - | chr4_2:50177137-50177156 | Msa0604540:intron | 50.0% |
| ! | CTCACAGGGGATTTCTAGGT+TGG | - | chr4_2:50177236-50177255 | Msa0604540:intron | 50.0% |
| !! | AGGGGATTTCTAGGTTGGTG+CGG | - | chr4_2:50177241-50177260 | Msa0604540:intron | 50.0% |
| ACTGTAGGGACTAGGGATCA+AGG | + | chr4_2:50177640-50177659 | None:intergenic | 50.0% | |
| GTGAGACTGTACGAGCAACA+GGG | + | chr4_2:50177764-50177783 | None:intergenic | 50.0% | |
| AGTGAGACTGTACGAGCAAC+AGG | + | chr4_2:50177765-50177784 | None:intergenic | 50.0% | |
| !! | TGGCTCTGGCAATGCTATTC+AGG | - | chr4_2:50178307-50178326 | Msa0604540:intron | 50.0% |
| CTGGCAATGCTATTCAGGTC+TGG | - | chr4_2:50178312-50178331 | Msa0604540:intron | 50.0% | |
| GGTATGCATGGCTATGCTCT+TGG | - | chr4_2:50178482-50178501 | Msa0604540:intron | 50.0% | |
| GACTCGACAAGGATGCTCAA+CGG | - | chr4_2:50178761-50178780 | Msa0604540:CDS | 50.0% | |
| AGGATGCTCAACGGTAAAGG+CGG | - | chr4_2:50178770-50178789 | Msa0604540:CDS | 50.0% | |
| AGTCGGAAGGGAAAACTCTG+GGG | + | chr4_2:50179204-50179223 | None:intergenic | 50.0% | |
| CAGTCGGAAGGGAAAACTCT+GGG | + | chr4_2:50179205-50179224 | None:intergenic | 50.0% | |
| TCAGTCGGAAGGGAAAACTC+TGG | + | chr4_2:50179206-50179225 | None:intergenic | 50.0% | |
| GAGCAATAGCTCAGTCGGAA+GGG | + | chr4_2:50179216-50179235 | None:intergenic | 50.0% | |
| AGAGCAATAGCTCAGTCGGA+AGG | + | chr4_2:50179217-50179236 | None:intergenic | 50.0% | |
| TGACCGAGAGAGCAGTCAAT+AGG | + | chr4_2:50179492-50179511 | None:intergenic | 50.0% | |
| CTCTATCTTGCGCTGCTGAA+GGG | + | chr4_2:50179621-50179640 | None:intergenic | 50.0% | |
| CTTCAGCAGCGCAAGATAGA+GGG | - | chr4_2:50179620-50179639 | Msa0604540:CDS | 50.0% | |
| !! | GAGGTGCATTGGTGACGAAA+AGG | - | chr4_2:50180487-50180506 | Msa0604540:CDS | 50.0% |
| AGTTGGGAGAGGGTTACCAA+AGG | + | chr4_2:50180863-50180882 | None:intergenic | 50.0% | |
| AGGAAAAGGGAGTTGGGAGA+GGG | + | chr4_2:50180873-50180892 | None:intergenic | 50.0% | |
| AACAAAGCCTCCCCCTTAAG+AGG | - | chr4_2:50181137-50181156 | Msa0604540:CDS | 50.0% | |
| ! | GGAGGCACAAAGTTCATGCA+AGG | - | chr4_2:50181171-50181190 | Msa0604540:CDS | 50.0% |
| !!! | TTTTTTTCTTCGAGGGGCCG+GGG | - | chr4_2:50181821-50181840 | Msa0604540:CDS | 50.0% |
| TACCCGAAAACGGTCACACA+AGG | + | chr4_2:50182027-50182046 | None:intergenic | 50.0% | |
| GGGACACAAGTTACCCTCAT+CGG | + | chr4_2:50183035-50183054 | None:intergenic | 50.0% | |
| CATGCTTCTGTAGTGGCTCT+TGG | - | chr4_2:50183152-50183171 | Msa0604540:intron | 50.0% | |
| !! | CAGAACCCCTTTGGAACCAG+AGG | + | chr4_2:50174610-50174629 | None:intergenic | 55.0% |
| GGACCATACCTCCTCAGTGA+TGG | + | chr4_2:50175869-50175888 | None:intergenic | 55.0% | |
| TCTGCTGTGAAGGAAGCTGC+AGG | - | chr4_2:50176036-50176055 | Msa0604540:intron | 55.0% | |
| !! | GGCGGATTACTCAGGTCTCA+AGG | - | chr4_2:50176652-50176671 | Msa0604540:CDS | 55.0% |
| CAGTTGGACGATCACTCCTG+TGG | - | chr4_2:50177176-50177195 | Msa0604540:intron | 55.0% | |
| TTGGACGATCACTCCTGTGG+TGG | - | chr4_2:50177179-50177198 | Msa0604540:intron | 55.0% | |
| TGTATGGCTGCACGCTTGCA+TGG | - | chr4_2:50177785-50177804 | Msa0604540:intron | 55.0% | |
| GTCGGAAGGGAAAACTCTGG+GGG | + | chr4_2:50179203-50179222 | None:intergenic | 55.0% | |
| CCTCTATCTTGCGCTGCTGA+AGG | + | chr4_2:50179622-50179641 | None:intergenic | 55.0% | |
| CCTTCAGCAGCGCAAGATAG+AGG | - | chr4_2:50179619-50179638 | Msa0604540:CDS | 55.0% | |
| GAGGAAAAGGGAGTTGGGAG+AGG | + | chr4_2:50180874-50180893 | None:intergenic | 55.0% | |
| GGTTAATGACTTTCGGCGCC+TGG | - | chr4_2:50182603-50182622 | Msa0604540:intron | 55.0% | |
| ! | CACTGAGGAGGTATGGTCCG+TGG | - | chr4_2:50175870-50175889 | Msa0604540:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 50174317 | 50183406 | 50174317 | ID=Msa0604540;Name=Msa0604540 |
| chr4_2 | mRNA | 50174317 | 50183406 | 50174317 | ID=Msa0604540-mRNA-1;Parent=Msa0604540;Name=Msa0604540-mRNA-1;_AED=0.07;_eAED=0.07;_QI=121|0.9|0.90|1|0.8|0.72|11|274|682 |
| chr4_2 | exon | 50174317 | 50174739 | 50174317 | ID=Msa0604540-mRNA-1:exon:11729;Parent=Msa0604540-mRNA-1 |
| chr4_2 | exon | 50175459 | 50175525 | 50175459 | ID=Msa0604540-mRNA-1:exon:11728;Parent=Msa0604540-mRNA-1 |
| chr4_2 | exon | 50176444 | 50176676 | 50176444 | ID=Msa0604540-mRNA-1:exon:11727;Parent=Msa0604540-mRNA-1 |
| chr4_2 | exon | 50178037 | 50178106 | 50178037 | ID=Msa0604540-mRNA-1:exon:11726;Parent=Msa0604540-mRNA-1 |
| chr4_2 | exon | 50178735 | 50178974 | 50178735 | ID=Msa0604540-mRNA-1:exon:11725;Parent=Msa0604540-mRNA-1 |
| chr4_2 | exon | 50179395 | 50179755 | 50179395 | ID=Msa0604540-mRNA-1:exon:11724;Parent=Msa0604540-mRNA-1 |
| chr4_2 | exon | 50180470 | 50180580 | 50180470 | ID=Msa0604540-mRNA-1:exon:11723;Parent=Msa0604540-mRNA-1 |
| chr4_2 | exon | 50181102 | 50181252 | 50181102 | ID=Msa0604540-mRNA-1:exon:11722;Parent=Msa0604540-mRNA-1 |
| chr4_2 | exon | 50181666 | 50182191 | 50181666 | ID=Msa0604540-mRNA-1:exon:11721;Parent=Msa0604540-mRNA-1 |
| chr4_2 | exon | 50182703 | 50182873 | 50182703 | ID=Msa0604540-mRNA-1:exon:11720;Parent=Msa0604540-mRNA-1 |
| chr4_2 | exon | 50183316 | 50183406 | 50183316 | ID=Msa0604540-mRNA-1:exon:11719;Parent=Msa0604540-mRNA-1 |
| chr4_2 | five_prime_UTR | 50183316 | 50183406 | 50183316 | ID=Msa0604540-mRNA-1:five_prime_utr;Parent=Msa0604540-mRNA-1 |
| chr4_2 | five_prime_UTR | 50182844 | 50182873 | 50182844 | ID=Msa0604540-mRNA-1:five_prime_utr;Parent=Msa0604540-mRNA-1 |
| chr4_2 | CDS | 50182703 | 50182843 | 50182703 | ID=Msa0604540-mRNA-1:cds;Parent=Msa0604540-mRNA-1 |
| chr4_2 | CDS | 50181666 | 50182191 | 50181666 | ID=Msa0604540-mRNA-1:cds;Parent=Msa0604540-mRNA-1 |
| chr4_2 | CDS | 50181102 | 50181252 | 50181102 | ID=Msa0604540-mRNA-1:cds;Parent=Msa0604540-mRNA-1 |
| chr4_2 | CDS | 50180470 | 50180580 | 50180470 | ID=Msa0604540-mRNA-1:cds;Parent=Msa0604540-mRNA-1 |
| chr4_2 | CDS | 50179395 | 50179755 | 50179395 | ID=Msa0604540-mRNA-1:cds;Parent=Msa0604540-mRNA-1 |
| chr4_2 | CDS | 50178735 | 50178974 | 50178735 | ID=Msa0604540-mRNA-1:cds;Parent=Msa0604540-mRNA-1 |
| chr4_2 | CDS | 50178037 | 50178106 | 50178037 | ID=Msa0604540-mRNA-1:cds;Parent=Msa0604540-mRNA-1 |
| chr4_2 | CDS | 50176444 | 50176676 | 50176444 | ID=Msa0604540-mRNA-1:cds;Parent=Msa0604540-mRNA-1 |
| chr4_2 | CDS | 50175459 | 50175525 | 50175459 | ID=Msa0604540-mRNA-1:cds;Parent=Msa0604540-mRNA-1 |
| chr4_2 | CDS | 50174591 | 50174739 | 50174591 | ID=Msa0604540-mRNA-1:cds;Parent=Msa0604540-mRNA-1 |
| chr4_2 | three_prime_UTR | 50174317 | 50174590 | 50174317 | ID=Msa0604540-mRNA-1:three_prime_utr;Parent=Msa0604540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
