AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0543130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0543130 MtrunA17_Chr4g0022911 83.893 298 35 3 1 292 1 291 1.90e-173 481
Msa0543130 MtrunA17_Chr4g0022901 81.911 293 31 3 1 292 1 272 1.82e-162 452
Msa0543130 MtrunA17_Chr4g0022931 73.810 294 53 6 1 292 1 272 2.31e-138 391
Msa0543130 MtrunA17_Chr2g0323351 43.182 308 98 11 1 292 1 247 6.33e-71 219
Msa0543130 MtrunA17_Chr1g0187761 48.529 204 90 4 1 203 1 190 9.10e-58 186
Msa0543130 MtrunA17_Chr1g0167691 67.797 118 37 1 1 118 1 117 2.17e-56 182
Msa0543130 MtrunA17_Chr7g0261281 64.885 131 43 2 1 131 1 128 1.06e-55 181
Msa0543130 MtrunA17_Chr1g0167661 48.113 212 94 7 1 209 1 199 1.24e-55 180
Msa0543130 MtrunA17_Chr7g0274581 62.992 127 46 1 1 127 1 126 4.39e-55 177
Msa0543130 MtrunA17_Chr2g0281071 64.407 118 42 0 1 118 1 118 4.62e-54 179
Msa0543130 MtrunA17_Chr4g0022881 55.797 138 58 2 1 136 1 137 1.91e-53 174
Msa0543130 MtrunA17_Chr4g0048511 62.712 118 44 0 1 118 1 118 3.06e-53 177
Msa0543130 MtrunA17_Chr3g0115821 62.712 118 43 1 1 118 1 117 1.69e-52 175
Msa0543130 MtrunA17_Chr2g0323411 66.102 118 39 1 1 118 1 117 2.73e-52 174
Msa0543130 MtrunA17_Chr1g0203411 63.248 117 42 1 1 117 1 116 4.39e-52 172
Msa0543130 MtrunA17_Chr4g0042671 65.517 116 39 1 1 116 1 115 9.20e-52 174
Msa0543130 MtrunA17_Chr4g0057031 63.559 118 42 1 1 118 1 117 1.75e-51 170
Msa0543130 MtrunA17_Chr4g0070611 58.519 135 55 1 1 135 1 134 4.50e-51 170
Msa0543130 MtrunA17_Chr8g0349261 63.025 119 43 1 1 118 1 119 4.85e-51 170
Msa0543130 MtrunA17_Chr3g0110351 56.429 140 59 2 1 140 1 138 5.38e-51 170
Msa0543130 MtrunA17_Chr4g0070641 58.519 135 55 1 1 135 1 134 1.01e-50 165
Msa0543130 MtrunA17_Chr4g0039971 61.864 118 44 1 1 118 2 118 1.10e-50 170
Msa0543130 MtrunA17_Chr5g0410961 62.712 118 43 1 1 118 1 117 1.32e-50 170
Msa0543130 MtrunA17_Chr3g0131121 54.248 153 64 3 1 149 1 151 1.43e-50 168
Msa0543130 MtrunA17_Chr2g0323321 77.419 93 19 2 1 93 1 91 1.88e-50 162
Msa0543130 MtrunA17_Chr7g0228891 60.345 116 45 1 1 116 1 115 2.34e-50 167
Msa0543130 MtrunA17_Chr6g0453471 62.931 116 42 1 1 116 1 115 5.73e-50 169
Msa0543130 MtrunA17_Chr4g0022891 62.281 114 42 1 1 114 1 113 5.78e-50 165
Msa0543130 MtrunA17_Chr7g0217741 62.069 116 43 1 1 116 1 115 1.09e-49 166
Msa0543130 MtrunA17_Chr4g0037141 59.664 119 47 1 1 119 1 118 1.12e-49 166
Msa0543130 MtrunA17_Chr7g0275911 62.931 116 42 1 1 116 1 115 1.38e-49 164
Msa0543130 MtrunA17_Chr8g0346561 58.209 134 55 1 1 134 1 133 1.44e-49 166
Msa0543130 MtrunA17_Chr1g0211161 58.475 118 49 0 1 118 1 118 2.05e-49 163
Msa0543130 MtrunA17_Chr5g0434571 61.207 116 44 1 1 116 37 151 3.56e-49 166
Msa0543130 MtrunA17_Chr4g0068061 61.207 116 44 1 1 116 1 115 7.38e-49 165
Msa0543130 MtrunA17_Chr5g0395281 61.017 118 45 1 1 118 1 117 7.53e-49 164
Msa0543130 MtrunA17_Chr1g0193371 62.069 116 43 1 1 116 1 115 2.43e-48 165
Msa0543130 MtrunA17_Chr2g0311221 65.455 110 37 1 2 111 4 112 2.88e-48 163
Msa0543130 MtrunA17_Chr3g0117091 59.821 112 45 0 7 118 6 117 5.92e-48 163
Msa0543130 MtrunA17_Chr8g0385321 59.350 123 45 2 1 119 1 122 6.92e-48 162
Msa0543130 MtrunA17_Chr4g0058631 43.005 193 93 3 1 193 1 176 6.99e-48 163
Msa0543130 MtrunA17_Chr1g0193801 52.740 146 56 2 1 134 1 145 8.35e-48 164
Msa0543130 MtrunA17_Chr3g0103281 59.483 116 46 1 1 116 1 115 9.18e-48 162
Msa0543130 MtrunA17_Chr7g0270891 53.741 147 54 3 1 134 1 146 1.28e-47 163
Msa0543130 MtrunA17_Chr4g0044421 60.345 116 46 0 3 118 2 117 9.06e-47 155
Msa0543130 MtrunA17_Chr5g0435101 59.483 116 46 1 3 118 2 116 1.17e-46 155
Msa0543130 MtrunA17_Chr6g0452271 58.475 118 48 1 1 118 1 117 1.65e-46 159
Msa0543130 MtrunA17_Chr5g0417821 65.421 107 37 0 12 118 6 112 2.33e-46 157
Msa0543130 MtrunA17_Chr3g0121241 35.740 277 151 6 5 278 35 287 3.36e-46 157
Msa0543130 MtrunA17_Chr7g0217221 44.554 202 92 5 1 183 1 201 4.41e-46 156
Msa0543130 MtrunA17_Chr2g0309911 59.821 112 45 0 7 118 5 116 9.26e-46 156
Msa0543130 MtrunA17_Chr1g0151941 55.285 123 53 2 1 122 1 122 1.41e-45 154
Msa0543130 MtrunA17_Chr2g0330041 56.780 118 50 1 1 118 1 117 5.75e-45 157
Msa0543130 MtrunA17_Chr8g0342541 55.085 118 52 1 1 118 1 117 7.10e-45 155
Msa0543130 MtrunA17_Chr1g0194951 57.759 116 48 1 1 116 1 115 8.04e-45 155
Msa0543130 MtrunA17_Chr4g0055981 62.857 105 39 0 13 117 55 159 1.40e-44 151
Msa0543130 MtrunA17_Chr4g0028311 57.143 119 49 2 1 118 1 118 2.05e-44 153
Msa0543130 MtrunA17_Chr4g0060721 48.592 142 71 2 1 142 2 141 2.26e-44 153
Msa0543130 MtrunA17_Chr8g0342521 54.237 118 53 1 1 118 1 117 3.67e-44 153
Msa0543130 MtrunA17_Chr7g0254411 57.759 116 48 1 1 116 1 115 4.31e-44 153
Msa0543130 MtrunA17_Chr5g0434931 53.846 130 57 1 12 138 34 163 5.82e-44 151
Msa0543130 MtrunA17_Chr3g0092401 56.897 116 49 1 1 116 2 116 5.90e-44 152
Msa0543130 MtrunA17_Chr8g0342481 56.000 125 49 4 1 121 1 123 6.32e-44 154
Msa0543130 MtrunA17_Chr5g0400821 56.303 119 50 2 1 118 1 118 7.98e-44 151
Msa0543130 MtrunA17_Chr1g0152011 55.462 119 51 2 1 118 1 118 1.01e-43 152
Msa0543130 MtrunA17_Chr7g0271241 60.000 110 43 1 1 110 1 109 1.20e-43 152
Msa0543130 MtrunA17_Chr2g0328771 62.500 104 39 0 13 116 20 123 1.43e-43 151
Msa0543130 MtrunA17_Chr7g0240821 43.023 172 97 1 17 188 5 175 1.67e-43 148
Msa0543130 MtrunA17_Chr3g0135311 57.265 117 48 2 1 116 1 116 1.72e-43 151
Msa0543130 MtrunA17_Chr6g0453211 58.559 111 45 1 1 111 1 110 5.78e-43 149
Msa0543130 MtrunA17_Chr7g0264641 55.462 119 51 2 1 118 1 118 8.26e-43 147
Msa0543130 MtrunA17_Chr8g0387421 56.757 111 48 0 6 116 5 115 8.33e-43 149
Msa0543130 MtrunA17_Chr3g0088461 62.264 106 40 0 11 116 20 125 1.17e-42 149
Msa0543130 MtrunA17_Chr5g0434911 51.493 134 61 1 9 138 17 150 1.20e-42 147
Msa0543130 MtrunA17_Chr5g0434831 44.211 190 97 4 8 191 2 188 2.10e-42 144
Msa0543130 MtrunA17_Chr2g0327351 58.036 112 45 2 1 111 1 111 2.88e-42 147
Msa0543130 MtrunA17_Chr5g0397231 58.491 106 44 0 6 111 5 110 3.35e-42 148
Msa0543130 MtrunA17_Chr1g0180391 61.905 105 40 0 13 117 19 123 4.53e-42 144
Msa0543130 MtrunA17_Chr4g0032401 60.577 104 41 0 13 116 17 120 5.01e-42 147
Msa0543130 MtrunA17_Chr1g0209661 60.952 105 41 0 13 117 27 131 6.88e-42 146
Msa0543130 MtrunA17_Chr7g0228991 48.077 156 77 2 8 160 24 178 1.90e-41 144
Msa0543130 MtrunA17_Chr6g0487491 53.237 139 52 4 1 130 1 135 1.90e-41 144
Msa0543130 MtrunA17_Chr4g0054391 56.757 111 46 2 1 110 1 110 2.09e-41 144
Msa0543130 MtrunA17_Chr5g0434841 51.064 141 64 1 3 138 10 150 2.80e-41 145
Msa0543130 MtrunA17_Chr7g0228231 44.444 180 88 2 13 187 14 186 3.86e-41 141
Msa0543130 MtrunA17_Chr1g0203441 59.615 104 42 0 14 117 14 117 3.91e-41 143
Msa0543130 MtrunA17_Chr7g0269831 59.829 117 46 1 1 117 1 116 4.41e-41 145
Msa0543130 MtrunA17_Chr6g0450101 44.509 173 93 2 13 184 14 184 9.04e-41 140
Msa0543130 MtrunA17_Chr3g0080861 57.692 104 44 0 13 116 37 140 1.43e-40 147
Msa0543130 MtrunA17_Chr3g0099131 56.604 106 46 0 11 116 39 144 2.19e-40 147
Msa0543130 MtrunA17_Chr8g0360111 61.165 103 40 0 11 113 23 125 2.34e-40 141
Msa0543130 MtrunA17_Chr7g0220341 48.889 135 65 2 8 138 20 154 2.98e-40 141
Msa0543130 MtrunA17_Chr1g0154031 55.963 109 48 0 13 121 76 184 3.30e-40 144
Msa0543130 MtrunA17_Chr6g0470971 55.556 108 48 0 11 118 12 119 3.60e-40 141
Msa0543130 MtrunA17_Chr1g0186061 60.194 103 41 0 14 116 21 123 3.69e-40 140
Msa0543130 MtrunA17_Chr4g0072751 57.143 112 46 2 1 111 1 111 4.06e-40 142
Msa0543130 MtrunA17_Chr8g0354661 58.654 104 43 0 13 116 37 140 5.00e-40 146
Msa0543130 MtrunA17_Chr1g0168661 55.172 116 52 0 14 129 22 137 6.04e-40 140
Msa0543130 MtrunA17_Chr8g0343831 54.310 116 48 1 1 116 1 111 1.11e-39 139
Msa0543130 MtrunA17_Chr1g0194291 57.944 107 45 0 11 117 19 125 4.55e-39 137
Msa0543130 MtrunA17_Chr1g0194301 56.190 105 46 0 13 117 33 137 1.58e-38 137
Msa0543130 MtrunA17_Chr2g0327821 54.206 107 49 0 13 119 6 112 1.60e-37 133
Msa0543130 MtrunA17_Chr2g0322521 56.364 110 48 0 7 116 23 132 1.08e-36 135
Msa0543130 MtrunA17_Chr4g0042611 58.427 89 36 1 1 89 1 88 3.60e-35 122
Msa0543130 MtrunA17_Chr4g0030881 52.727 110 45 1 14 116 8 117 1.08e-34 126
Msa0543130 MtrunA17_Chr2g0293911 57.143 105 45 0 13 117 24 128 2.07e-34 127
Msa0543130 MtrunA17_Chr1g0192411 51.923 104 50 0 13 116 12 115 1.08e-33 127
Msa0543130 MtrunA17_Chr7g0247131 71.233 73 21 0 44 116 9 81 1.24e-33 124
Msa0543130 MtrunA17_Chr4g0068921 56.190 105 46 0 13 117 24 128 2.26e-33 120
Msa0543130 MtrunA17_Chr2g0294811 56.989 93 39 1 1 93 1 92 2.78e-33 118
Msa0543130 MtrunA17_Chr5g0395221 60.674 89 34 1 1 89 1 88 6.00e-33 116
Msa0543130 MtrunA17_Chr5g0440781 39.869 153 83 3 14 159 13 163 6.22e-33 119
Msa0543130 MtrunA17_Chr5g0440761 41.060 151 84 3 14 159 13 163 6.63e-33 122
Msa0543130 MtrunA17_Chr5g0441141 41.060 151 84 3 14 159 13 163 6.88e-33 122
Msa0543130 MtrunA17_Chr5g0441131 40.426 141 76 2 14 146 10 150 2.20e-32 118
Msa0543130 MtrunA17_Chr8g0342531 55.682 88 39 0 3 90 2 89 3.89e-31 114
Msa0543130 MtrunA17_Chr8g0334881 50.000 106 52 1 13 117 10 115 1.46e-30 117
Msa0543130 MtrunA17_Chr6g0454921 42.857 140 72 2 15 147 15 153 1.77e-30 114
Msa0543130 MtrunA17_Chr3g0133601 51.456 103 49 1 15 117 37 138 3.90e-30 113
Msa0543130 MtrunA17_Chr4g0008551 38.961 154 69 3 15 145 38 189 4.65e-30 116
Msa0543130 MtrunA17_Chr8g0342461 54.839 93 36 3 1 90 1 90 9.19e-30 110
Msa0543130 MtrunA17_Chr8g0342511 53.409 88 40 1 1 88 1 87 1.13e-29 108
Msa0543130 MtrunA17_Chr4g0053431 50.000 102 50 1 15 116 5 105 1.58e-29 113
Msa0543130 MtrunA17_Chr5g0429661 48.544 103 50 2 15 116 122 222 1.70e-29 114
Msa0543130 MtrunA17_Chr3g0099141 52.941 85 40 0 11 95 38 122 2.51e-29 108
Msa0543130 MtrunA17_Chr5g0434901 54.737 95 40 1 47 138 7 101 2.55e-29 108
Msa0543130 MtrunA17_Chr5g0401731 38.650 163 87 3 15 177 15 164 3.16e-29 113
Msa0543130 MtrunA17_Chr8g0342471 53.763 93 37 3 1 90 1 90 4.66e-29 108
Msa0543130 MtrunA17_Chr4g0013361 47.115 104 54 1 13 115 10 113 6.04e-28 109
Msa0543130 MtrunA17_Chr7g0229131 51.064 94 44 1 44 137 3 94 1.51e-27 105
Msa0543130 MtrunA17_Chr6g0480581 50.495 101 49 1 15 115 4 103 1.89e-27 106
Msa0543130 MtrunA17_Chr7g0229101 49.495 99 46 1 44 138 3 101 6.29e-27 104
Msa0543130 MtrunA17_Chr5g0417621 49.515 103 49 2 15 116 134 234 2.97e-26 107
Msa0543130 MtrunA17_Chr4g0058991 45.631 103 53 2 15 116 209 309 3.96e-26 107
Msa0543130 MtrunA17_Chr7g0238631 48.571 105 51 2 13 116 111 213 5.06e-26 107
Msa0543130 MtrunA17_Chr7g0228531 41.221 131 74 3 15 144 220 348 8.07e-26 105
Msa0543130 MtrunA17_Chr4g0042501 48.544 103 50 2 15 116 105 205 1.23e-25 105
Msa0543130 MtrunA17_Chr6g0453751 48.936 94 39 2 12 96 19 112 3.98e-25 97.4
Msa0543130 MtrunA17_Chr5g0425591 52.381 84 39 1 14 96 10 93 5.29e-25 95.9
Msa0543130 MtrunA17_Chr1g0157731 39.062 128 77 1 13 140 89 215 5.44e-25 104
Msa0543130 MtrunA17_Chr1g0157731 36.000 100 62 2 15 113 39 137 4.05e-14 72.8
Msa0543130 MtrunA17_Chr3g0117511 41.748 103 57 2 15 116 183 283 6.31e-25 103
Msa0543130 MtrunA17_Chr3g0139671 45.098 102 55 1 15 116 85 185 1.15e-24 103
Msa0543130 MtrunA17_Chr3g0139671 37.000 100 61 2 15 113 33 131 6.21e-14 72.0
Msa0543130 MtrunA17_Chr6g0460661 42.718 103 56 2 15 116 16 116 1.01e-23 94.7
Msa0543130 MtrunA17_Chr3g0125801 49.515 103 49 2 15 116 16 116 1.05e-23 97.8
Msa0543130 MtrunA17_Chr5g0437321 44.660 103 48 2 15 113 19 116 1.99e-23 97.1
Msa0543130 MtrunA17_Chr7g0254261 48.039 102 52 1 15 116 89 189 7.40e-23 96.7
Msa0543130 MtrunA17_Chr6g0460671 44.118 102 56 1 15 116 99 199 1.77e-22 95.5
Msa0543130 MtrunA17_Chr7g0228481 38.129 139 79 4 15 150 220 354 3.56e-22 95.5
Msa0543130 MtrunA17_Chr3g0093811 53.425 73 34 0 44 116 13 85 2.27e-21 90.9
Msa0543130 MtrunA17_Chr5g0397841 45.918 98 52 1 13 110 108 204 3.38e-21 93.2
Msa0543130 MtrunA17_Chr7g0228401 33.987 153 81 6 26 163 290 437 4.14e-21 92.8
Msa0543130 MtrunA17_Chr2g0323331 30.093 216 114 5 89 269 5 218 2.32e-20 89.7
Msa0543130 MtrunA17_Chr1g0177901 35.766 137 77 5 26 157 4 134 2.36e-20 87.0
Msa0543130 MtrunA17_Chr7g0233061 39.316 117 61 4 9 120 174 285 2.57e-20 89.7
Msa0543130 MtrunA17_Chr7g0238651 43.750 96 52 1 18 111 10 105 3.89e-19 86.3
Msa0543130 MtrunA17_Chr8g0362231 41.284 109 61 2 17 124 24 130 2.61e-17 81.6
Msa0543130 MtrunA17_Chr5g0416341 42.157 102 56 2 17 117 28 127 2.91e-16 78.6
Msa0543130 MtrunA17_Chr1g0193901 45.977 87 45 2 13 97 11 97 2.07e-15 70.9
Msa0543130 MtrunA17_Chr1g0193891 45.977 87 45 2 13 97 11 97 2.07e-15 70.9
Msa0543130 MtrunA17_Chr1g0193871 45.977 87 45 2 13 97 11 97 2.07e-15 70.9
Msa0543130 MtrunA17_Chr1g0193881 45.977 87 45 2 13 97 11 97 2.07e-15 70.9
Msa0543130 MtrunA17_Chr5g0434871 63.636 44 16 0 75 118 2 45 4.78e-15 68.6
Msa0543130 MtrunA17_Chr2g0322831 58.974 39 16 0 71 109 34 72 1.82e-11 59.3
Msa0543130 MtrunA17_Chr7g0233151 34.259 108 62 3 72 175 7 109 3.07e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0543130 AT3G23250.1 40.000 280 136 9 1 252 1 276 4.98e-57 185
Msa0543130 AT2G31180.1 49.038 208 88 5 1 208 1 190 1.02e-55 181
Msa0543130 AT1G06180.1 68.966 116 35 1 1 116 1 115 8.26e-55 178
Msa0543130 AT4G28110.1 66.102 118 39 1 1 118 1 117 1.10e-54 179
Msa0543130 AT3G61250.1 65.254 118 40 1 1 118 1 117 2.70e-53 176
Msa0543130 AT4G05100.1 63.559 118 43 0 1 118 1 118 4.25e-53 176
Msa0543130 AT3G02940.2 63.559 118 42 1 1 118 1 117 1.23e-52 174
Msa0543130 AT4G21440.1 63.559 118 42 1 1 118 1 117 1.73e-52 175
Msa0543130 AT3G13540.1 43.128 211 102 5 4 202 15 219 1.94e-52 172
Msa0543130 AT5G16770.4 62.712 118 43 1 1 118 1 117 1.98e-52 174
Msa0543130 AT5G16770.3 62.712 118 43 1 1 118 1 117 1.98e-52 174
Msa0543130 AT3G02940.1 63.559 118 42 1 1 118 1 117 2.76e-52 174
Msa0543130 AT3G02940.3 63.559 118 42 1 1 118 1 117 2.76e-52 174
Msa0543130 AT4G38620.1 47.368 190 91 4 1 187 1 184 3.57e-52 172
Msa0543130 AT5G16770.1 62.712 118 43 1 1 118 1 117 4.16e-52 174
Msa0543130 AT5G16770.2 62.712 118 43 1 1 118 1 117 4.16e-52 174
Msa0543130 AT1G79180.1 55.634 142 60 2 2 143 4 142 9.36e-52 172
Msa0543130 AT1G22640.1 42.029 207 97 5 1 199 1 192 3.67e-51 169
Msa0543130 AT3G01140.2 64.407 118 41 1 1 118 1 117 4.06e-51 172
Msa0543130 AT5G15310.1 62.712 118 43 1 1 118 1 117 7.07e-51 171
Msa0543130 AT5G15310.2 62.712 118 43 1 1 118 1 117 8.71e-51 170
Msa0543130 AT5G15310.4 62.712 118 43 1 1 118 1 117 1.07e-50 167
Msa0543130 AT4G17785.2 59.322 118 48 0 1 118 1 118 1.15e-50 171
Msa0543130 AT4G17785.1 59.322 118 48 0 1 118 1 118 1.19e-50 171
Msa0543130 AT5G16600.1 49.689 161 80 1 1 161 1 160 1.94e-50 169
Msa0543130 AT5G10280.1 61.864 118 44 1 1 118 1 117 3.48e-50 169
Msa0543130 AT4G22680.1 61.017 118 45 1 1 118 1 117 5.25e-50 166
Msa0543130 AT1G16490.1 61.739 115 43 1 2 116 4 117 6.42e-50 166
Msa0543130 AT4G12350.1 62.712 118 43 1 1 118 1 117 7.19e-50 167
Msa0543130 AT2G16720.1 60.169 118 46 1 1 118 1 117 8.97e-50 166
Msa0543130 AT1G18570.1 61.864 118 45 0 1 118 1 118 1.56e-49 167
Msa0543130 AT5G65230.1 61.864 118 44 1 1 118 1 117 1.81e-49 166
Msa0543130 AT1G34670.1 61.017 118 45 1 1 118 1 117 3.08e-49 167
Msa0543130 AT3G01140.1 63.559 118 42 1 1 118 44 160 4.32e-49 167
Msa0543130 AT1G74080.1 63.478 115 41 1 1 115 1 114 5.49e-49 166
Msa0543130 AT4G09460.1 50.345 145 66 3 1 140 1 144 6.42e-49 162
Msa0543130 AT5G62320.1 42.714 199 91 5 2 193 3 185 6.63e-49 163
Msa0543130 AT1G74430.1 58.955 134 49 3 1 130 1 132 7.93e-49 164
Msa0543130 AT4G34990.1 50.610 164 65 3 1 164 1 148 9.38e-49 163
Msa0543130 AT1G35515.1 52.899 138 59 2 1 138 1 132 9.97e-49 161
Msa0543130 AT5G07690.1 60.504 119 46 1 1 119 1 118 1.63e-48 164
Msa0543130 AT1G66230.1 60.345 116 45 1 1 116 1 115 1.87e-48 163
Msa0543130 AT4G01680.3 54.054 148 59 3 1 140 1 147 2.37e-48 161
Msa0543130 AT5G60890.1 62.069 116 43 1 1 116 1 115 2.88e-48 163
Msa0543130 AT5G07700.1 59.016 122 49 1 1 122 1 121 3.80e-48 164
Msa0543130 AT5G07700.2 59.016 122 49 1 1 122 1 121 3.80e-48 164
Msa0543130 AT4G01680.1 54.054 148 59 3 1 140 1 147 6.65e-48 163
Msa0543130 AT1G56160.1 60.000 115 45 1 2 116 4 117 2.40e-47 160
Msa0543130 AT5G61420.2 57.377 122 51 1 1 122 1 121 2.51e-47 162
Msa0543130 AT1G18710.1 61.207 116 44 1 1 116 1 115 2.97e-47 159
Msa0543130 AT5G26660.1 61.207 116 44 1 1 116 1 115 4.28e-47 161
Msa0543130 AT5G56110.1 59.483 116 46 1 1 116 1 115 4.42e-47 160
Msa0543130 AT5G14340.1 58.621 116 47 1 1 116 13 127 6.36e-47 159
Msa0543130 AT3G62610.1 60.345 116 45 1 1 116 1 115 6.54e-47 160
Msa0543130 AT3G12820.1 59.483 116 46 1 3 118 5 119 1.28e-46 157
Msa0543130 AT3G28470.1 62.162 111 41 1 1 111 1 110 1.44e-46 159
Msa0543130 AT2G47460.1 59.483 116 46 1 1 116 1 115 2.04e-46 160
Msa0543130 AT5G49330.1 59.483 116 46 1 1 116 1 115 3.08e-46 159
Msa0543130 AT1G57560.1 57.627 118 49 1 1 118 1 117 4.19e-46 158
Msa0543130 AT3G47600.1 58.621 116 47 1 1 116 1 115 4.95e-46 158
Msa0543130 AT1G57560.2 57.627 118 49 1 1 118 1 117 5.58e-46 156
Msa0543130 AT5G54230.1 62.264 106 40 0 13 118 12 117 6.89e-46 157
Msa0543130 AT1G79180.2 45.143 175 60 3 2 143 4 175 1.35e-45 157
Msa0543130 AT5G14750.1 64.078 103 37 0 14 116 17 119 2.76e-45 152
Msa0543130 AT1G74650.1 57.627 118 49 1 1 118 1 117 3.09e-45 156
Msa0543130 AT1G09540.1 57.724 123 47 2 1 119 1 122 4.05e-45 156
Msa0543130 AT5G62470.2 57.759 116 48 1 1 116 1 115 1.05e-44 155
Msa0543130 AT5G57620.1 34.074 270 151 6 1 246 1 267 1.41e-44 154
Msa0543130 AT1G08810.1 58.621 116 47 1 1 116 1 115 1.61e-44 152
Msa0543130 AT4G01680.2 50.000 160 59 4 1 140 1 159 1.68e-44 154
Msa0543130 AT3G49690.1 57.500 120 49 2 1 119 1 119 2.69e-44 153
Msa0543130 AT3G13890.2 57.522 113 48 0 6 118 5 117 5.30e-44 153
Msa0543130 AT3G28910.1 57.759 116 48 1 1 116 1 115 5.75e-44 152
Msa0543130 AT5G40330.1 63.107 103 38 0 14 116 13 115 6.49e-44 149
Msa0543130 AT3G12720.1 54.464 112 51 0 7 118 16 127 1.15e-43 151
Msa0543130 AT5G35550.1 64.423 104 37 0 13 116 14 117 1.48e-43 149
Msa0543130 AT5G12870.1 57.759 116 49 0 1 116 6 121 2.66e-43 149
Msa0543130 AT3G27920.1 59.048 105 43 0 14 118 15 119 3.10e-43 148
Msa0543130 AT5G62470.1 57.759 116 47 2 1 116 1 114 3.49e-43 151
Msa0543130 AT5G23000.1 55.462 119 51 2 1 118 1 118 6.91e-43 150
Msa0543130 AT4G37780.1 53.782 119 53 2 1 118 1 118 9.61e-43 149
Msa0543130 AT5G65790.1 55.833 120 51 2 1 119 1 119 1.39e-42 150
Msa0543130 AT1G63910.1 56.757 111 48 0 6 116 5 115 2.67e-42 149
Msa0543130 AT3G27810.1 41.148 209 97 6 13 207 20 216 5.11e-42 144
Msa0543130 AT2G36890.1 56.303 119 50 2 1 118 1 118 5.43e-42 147
Msa0543130 AT2G36890.2 56.303 119 50 2 1 118 42 159 1.10e-41 147
Msa0543130 AT3G11440.2 57.407 108 46 0 9 116 37 144 1.56e-41 149
Msa0543130 AT3G11440.3 57.407 108 46 0 9 116 37 144 5.66e-41 149
Msa0543130 AT3G11440.4 57.407 108 46 0 9 116 37 144 5.66e-41 149
Msa0543130 AT3G11440.1 57.407 108 46 0 9 116 37 144 5.66e-41 149
Msa0543130 AT4G26930.1 59.223 103 42 0 13 115 19 121 5.85e-41 146
Msa0543130 AT5G06100.1 57.143 105 45 0 12 116 31 135 6.26e-41 147
Msa0543130 AT3G13890.1 53.279 122 48 1 6 118 5 126 6.35e-41 145
Msa0543130 AT4G13480.1 58.621 116 48 0 14 129 7 122 8.48e-41 142
Msa0543130 AT2G32460.2 57.143 105 45 0 12 116 5 109 1.32e-40 147
Msa0543130 AT2G32460.1 57.143 105 45 0 12 116 17 121 1.51e-40 147
Msa0543130 AT5G55020.1 60.194 103 41 0 13 115 26 128 1.74e-40 147
Msa0543130 AT3G24310.1 56.780 118 51 0 12 129 17 134 1.75e-40 142
Msa0543130 AT5G06100.5 57.143 105 45 0 12 116 31 135 2.14e-40 147
Msa0543130 AT5G06100.2 57.143 105 45 0 12 116 31 135 2.14e-40 147
Msa0543130 AT5G06100.3 57.143 105 45 0 12 116 31 135 2.14e-40 147
Msa0543130 AT5G06100.4 57.143 105 45 0 12 116 31 135 2.14e-40 147
Msa0543130 AT3G08500.1 59.615 104 42 0 13 116 30 133 2.79e-40 143
Msa0543130 AT3G01530.1 51.515 132 61 1 13 141 25 156 4.42e-40 139
Msa0543130 AT1G66370.1 48.529 136 61 1 12 138 7 142 1.10e-39 139
Msa0543130 AT5G52600.1 57.522 113 45 1 7 116 3 115 1.56e-39 137
Msa0543130 AT5G40350.1 59.434 106 43 0 13 118 17 122 1.95e-39 137
Msa0543130 AT3G30210.1 47.586 145 66 1 12 156 26 160 3.49e-39 139
Msa0543130 AT2G47190.1 37.143 210 106 4 2 187 9 216 4.85e-39 138
Msa0543130 AT1G48000.1 55.238 105 47 0 13 117 32 136 2.58e-38 135
Msa0543130 AT1G68320.1 57.143 105 45 0 13 117 19 123 5.61e-38 135
Msa0543130 AT3G48920.1 56.863 102 44 0 14 115 19 120 5.87e-38 135
Msa0543130 AT2G26960.1 58.416 101 42 0 15 115 22 122 9.27e-38 138
Msa0543130 AT4G25560.1 54.310 116 50 1 1 116 1 113 2.55e-37 134
Msa0543130 AT5G52260.1 60.194 103 41 0 14 116 13 115 4.19e-37 133
Msa0543130 AT1G25340.1 57.692 104 44 0 14 117 19 122 4.47e-37 133
Msa0543130 AT3G46130.1 54.717 106 48 0 12 117 8 113 9.45e-37 132
Msa0543130 AT5G59780.3 54.808 104 47 0 14 117 9 112 3.17e-36 130
Msa0543130 AT1G66380.1 60.952 105 41 0 12 116 7 111 1.88e-35 125
Msa0543130 AT3G06490.1 58.095 105 44 0 13 117 19 123 1.79e-34 127
Msa0543130 AT1G66390.1 60.000 105 42 0 12 116 7 111 2.00e-34 125
Msa0543130 AT5G35550.2 71.053 76 22 0 41 116 45 120 3.45e-34 125
Msa0543130 AT1G56650.1 58.095 105 44 0 12 116 7 111 5.23e-34 124
Msa0543130 AT5G49620.1 57.143 105 45 0 13 117 26 130 8.64e-34 125
Msa0543130 AT5G14750.3 63.043 92 25 2 25 116 3 85 2.30e-33 120
Msa0543130 AT3G53200.1 42.553 141 80 1 13 152 9 149 3.38e-33 122
Msa0543130 AT1G25340.2 54.808 104 42 1 14 117 19 117 2.03e-32 121
Msa0543130 AT1G25340.3 54.808 104 42 1 14 117 19 117 3.53e-32 121
Msa0543130 AT3G27810.2 39.326 178 82 6 44 207 2 167 4.86e-32 117
Msa0543130 AT5G26660.2 70.423 71 21 0 46 116 14 84 5.52e-32 121
Msa0543130 AT3G12820.2 68.571 70 22 0 49 118 2 71 9.92e-31 114
Msa0543130 AT5G49620.2 50.420 119 45 1 13 117 26 144 3.85e-30 116
Msa0543130 AT3G60460.1 38.728 173 78 4 13 159 11 181 6.62e-30 115
Msa0543130 AT2G26950.1 49.485 97 49 0 15 111 18 114 1.82e-29 115
Msa0543130 AT3G47600.2 55.435 92 37 1 25 116 22 109 3.72e-29 113
Msa0543130 AT5G40350.2 64.384 73 26 0 46 118 5 77 6.85e-29 108
Msa0543130 AT3G27785.1 44.828 116 63 1 1 116 175 289 1.10e-28 114
Msa0543130 AT4G18770.1 45.370 108 58 1 9 116 211 317 1.94e-28 113
Msa0543130 AT3G46130.3 61.644 73 28 0 45 117 9 81 2.06e-28 109
Msa0543130 AT3G09230.1 49.541 109 46 2 15 119 55 158 3.68e-28 112
Msa0543130 AT5G59780.2 62.500 72 27 0 46 117 20 91 3.80e-28 108
Msa0543130 AT3G46130.4 62.500 72 27 0 46 117 20 91 4.43e-28 108
Msa0543130 AT5G67300.1 50.000 102 50 1 15 116 6 106 9.26e-28 109
Msa0543130 AT1G17950.1 50.962 104 48 2 15 117 5 106 1.07e-27 108
Msa0543130 AT3G23250.2 41.566 166 73 6 59 203 1 163 1.08e-27 107
Msa0543130 AT5G11510.3 47.115 104 54 1 13 116 79 181 1.74e-27 112
Msa0543130 AT5G11510.3 37.000 100 61 2 15 113 29 127 7.96e-15 75.1
Msa0543130 AT5G11510.1 47.115 104 54 1 13 116 79 181 1.74e-27 112
Msa0543130 AT5G11510.1 37.000 100 61 2 15 113 29 127 7.96e-15 75.1
Msa0543130 AT5G11510.4 47.115 104 54 1 13 116 79 181 1.74e-27 112
Msa0543130 AT5G11510.4 37.000 100 61 2 15 113 29 127 7.96e-15 75.1
Msa0543130 AT5G11510.2 47.115 104 54 1 13 116 79 181 2.62e-27 112
Msa0543130 AT5G11510.2 37.000 100 61 2 15 113 29 127 9.24e-15 75.1
Msa0543130 AT4G33450.1 44.538 119 59 2 3 121 13 124 2.80e-27 107
Msa0543130 AT5G11510.5 47.115 104 54 1 13 116 79 181 2.90e-27 111
Msa0543130 AT5G11510.5 37.000 100 61 2 15 113 29 127 1.03e-14 74.7
Msa0543130 AT3G50060.1 40.458 131 75 2 15 145 6 133 5.07e-27 107
Msa0543130 AT1G69560.1 43.077 130 70 3 11 138 103 230 5.95e-27 107
Msa0543130 AT1G69560.2 43.077 130 70 3 11 138 119 246 7.27e-27 107
Msa0543130 AT5G58850.1 45.631 103 53 2 15 116 105 205 7.99e-27 108
Msa0543130 AT4G37260.1 48.544 103 52 1 15 117 13 114 9.62e-27 107
Msa0543130 AT5G11050.1 30.159 252 143 8 15 247 105 342 1.37e-26 108
Msa0543130 AT1G26780.1 49.515 103 49 2 15 116 98 198 2.95e-26 104
Msa0543130 AT5G40360.1 47.059 102 51 2 15 115 158 257 3.04e-26 106
Msa0543130 AT1G26780.2 48.571 105 51 2 13 116 96 198 3.61e-26 106
Msa0543130 AT3G53200.2 46.296 108 57 1 46 152 9 116 5.88e-26 102
Msa0543130 AT2G23290.1 47.573 103 53 1 15 117 13 114 8.78e-26 104
Msa0543130 AT3G09370.2 46.729 107 48 2 15 117 135 236 1.06e-25 106
Msa0543130 AT3G09370.1 46.729 107 48 2 15 117 130 231 1.08e-25 106
Msa0543130 AT5G02320.1 48.039 102 52 1 15 116 127 227 1.11e-25 106
Msa0543130 AT5G02320.1 38.000 100 60 2 15 113 75 173 1.89e-14 73.9
Msa0543130 AT5G02320.2 48.039 102 52 1 15 116 127 227 1.11e-25 106
Msa0543130 AT5G02320.2 38.000 100 60 2 15 113 75 173 1.89e-14 73.9
Msa0543130 AT5G02320.3 38.554 166 85 4 15 178 67 217 1.40e-25 106
Msa0543130 AT5G02320.3 38.739 111 63 4 7 113 4 113 2.95e-15 76.3
Msa0543130 AT3G09370.3 46.729 107 48 2 15 117 143 244 1.61e-25 106
Msa0543130 AT1G73410.1 52.427 103 46 2 15 116 6 106 4.13e-25 100
Msa0543130 AT3G55730.1 38.365 159 81 4 15 163 56 207 4.27e-25 103
Msa0543130 AT5G17800.1 39.394 132 70 2 15 146 93 214 6.00e-25 102
Msa0543130 AT1G66380.3 57.609 92 32 1 44 135 6 90 1.00e-24 95.9
Msa0543130 AT1G73410.2 52.427 103 46 2 15 116 6 106 1.42e-24 98.6
Msa0543130 AT2G39880.1 45.872 109 50 2 15 119 50 153 1.96e-24 101
Msa0543130 AT3G29020.1 43.137 102 57 1 15 116 65 165 4.54e-24 97.8
Msa0543130 AT3G29020.2 43.137 102 57 1 15 116 67 167 4.78e-24 99.4
Msa0543130 AT5G14750.4 68.966 58 18 0 59 116 1 58 5.77e-24 95.1
Msa0543130 AT5G14750.2 68.966 58 18 0 59 116 1 58 5.77e-24 95.1
Msa0543130 AT4G32730.5 44.231 104 57 1 13 116 85 187 6.79e-24 102
Msa0543130 AT4G32730.5 35.398 113 71 2 15 126 35 146 5.29e-14 72.8
Msa0543130 AT4G32730.4 44.231 104 57 1 13 116 85 187 6.79e-24 102
Msa0543130 AT4G32730.4 35.398 113 71 2 15 126 35 146 5.29e-14 72.8
Msa0543130 AT4G32730.3 44.231 104 57 1 13 116 85 187 6.79e-24 102
Msa0543130 AT4G32730.3 35.398 113 71 2 15 126 35 146 5.29e-14 72.8
Msa0543130 AT4G32730.2 44.231 104 57 1 13 116 85 187 6.79e-24 102
Msa0543130 AT4G32730.2 35.398 113 71 2 15 126 35 146 5.29e-14 72.8
Msa0543130 AT4G32730.1 44.231 104 57 1 13 116 85 187 7.29e-24 102
Msa0543130 AT4G32730.1 35.398 113 71 2 15 126 35 146 5.26e-14 72.8
Msa0543130 AT1G22640.3 38.849 139 63 4 59 189 1 125 7.32e-24 96.7
Msa0543130 AT1G66380.2 57.317 82 35 0 12 93 7 88 7.91e-23 91.3
Msa0543130 AT2G25230.1 44.248 113 58 3 9 120 20 128 8.97e-23 94.4
Msa0543130 AT1G18960.1 43.697 119 54 4 11 122 6 118 2.06e-22 95.1
Msa0543130 AT1G71030.2 56.716 67 29 0 52 118 5 71 2.58e-22 92.0
Msa0543130 AT1G71030.1 56.716 67 29 0 52 118 19 85 3.47e-22 92.0
Msa0543130 AT5G39700.1 42.520 127 56 3 8 121 49 171 1.81e-21 89.7
Msa0543130 AT2G37630.1 40.000 125 67 2 18 140 7 125 4.02e-20 89.7
Msa0543130 AT5G40430.1 40.833 120 65 4 2 120 41 155 2.72e-19 85.5
Msa0543130 AT4G00540.2 42.593 108 56 3 13 116 101 206 5.43e-19 86.7
Msa0543130 AT4G00540.2 35.833 120 69 2 15 126 46 165 6.34e-14 72.0
Msa0543130 AT4G00540.1 41.284 109 56 2 13 116 99 204 8.80e-19 86.3
Msa0543130 AT4G00540.1 35.833 120 69 2 15 126 44 163 7.66e-14 71.6
Msa0543130 AT1G14350.2 39.655 116 67 2 17 131 27 140 5.94e-18 84.0
Msa0543130 AT1G14350.1 39.655 116 67 2 17 131 27 140 5.94e-18 84.0
Msa0543130 AT3G18100.1 41.667 96 55 1 14 109 545 639 5.29e-17 81.6
Msa0543130 AT3G18100.3 41.667 96 55 1 14 109 497 591 8.66e-17 80.9
Msa0543130 AT3G18100.4 41.667 96 55 1 14 109 384 478 9.85e-17 80.9
Msa0543130 AT3G18100.2 41.667 96 55 1 14 109 332 426 1.41e-16 80.1
Msa0543130 AT2G02820.1 39.091 110 64 2 17 125 32 139 3.06e-16 79.0
Msa0543130 AT2G02820.2 39.091 110 64 2 17 125 32 139 3.45e-16 79.0
Msa0543130 AT2G02820.3 40.000 110 63 2 17 125 32 139 4.69e-16 77.8
Msa0543130 AT5G59780.1 57.447 47 20 0 71 117 1 47 1.72e-13 67.8
Msa0543130 AT3G46130.2 57.447 47 20 0 71 117 1 47 2.65e-13 67.8
Msa0543130 AT4G25560.2 62.222 45 17 0 72 116 3 47 8.58e-13 66.6
Msa0543130 AT1G14350.3 42.667 75 43 0 57 131 23 97 7.62e-12 65.5
Msa0543130 AT1G14350.4 42.667 75 43 0 57 131 23 97 7.62e-12 65.5

Find 68 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACACAAATCAAATTTATT+TGG 0.079432 4_1:+28600502 Msa0543130:three_prime_UTR
TCCACTACTTTGGATGATTT+TGG 0.124584 4_1:+28600139 Msa0543130:CDS
CTATAGTATATGATGATATT+TGG 0.196587 4_1:+28600446 Msa0543130:CDS
AATTCACTAGATGATGAAAA+TGG 0.245627 4_1:-28600091 None:intergenic
TTGAGGAGTAATTTGGTAAA+TGG 0.245669 4_1:-28600029 None:intergenic
GGCCCTTGGTGTCTGAGATT+TGG 0.262281 4_1:-28600060 None:intergenic
GATGATGAAAATGGGGATAA+AGG 0.281197 4_1:-28600082 None:intergenic
ATTGCTTATGTCACTAGATA+TGG 0.291146 4_1:+28599554 Msa0543130:CDS
CGCCAACTTCCCAAGTTTGC+AGG 0.293097 4_1:+28599590 Msa0543130:CDS
AACTGGATTGAGGAGTAATT+TGG 0.303507 4_1:-28600036 None:intergenic
ATCCATAACAAAACTTTCAT+TGG 0.308172 4_1:-28600287 None:intergenic
GCCCTTGGTGTCTGAGATTT+GGG 0.309174 4_1:-28600059 None:intergenic
AACACAAATCAAATTTATTT+GGG 0.312108 4_1:+28600503 Msa0543130:three_prime_UTR
TATCTATAGCTCTCTTCTTA+AGG 0.322144 4_1:-28599931 None:intergenic
TTTGTTATGGATAACGATTT+TGG 0.329855 4_1:+28600298 Msa0543130:CDS
ACTTCATTATCTGTTCTTCC+AGG 0.339491 4_1:-28599887 None:intergenic
AAGATGTGGATGAAAACTTT+TGG 0.346585 4_1:+28600182 Msa0543130:CDS
CTAGATATGGTTGCTGGAAT+TGG 0.347558 4_1:+28599567 Msa0543130:CDS
ATCTATAGCTCTCTTCTTAA+GGG 0.362294 4_1:-28599930 None:intergenic
GGTGTCTGAGATTTGGGAAC+TGG 0.373391 4_1:-28600053 None:intergenic
CCTTCATGTGACAAAATTAG+TGG 0.383309 4_1:+28599488 Msa0543130:CDS
ATATTAATTACCTGCAAACT+TGG 0.384230 4_1:-28599600 None:intergenic
ATTCACTAGATGATGAAAAT+GGG 0.403181 4_1:-28600090 None:intergenic
ATATCACAGTTCCACTACTT+TGG 0.405915 4_1:+28600129 Msa0543130:CDS
TGATATTTGGAGTTGAGTTA+AGG 0.412199 4_1:+28600459 Msa0543130:exon
ATGATGAAAATGGGGATAAA+GGG 0.417667 4_1:-28600081 None:intergenic
TGAGGTGGCTGAATTATCTA+AGG 0.418133 4_1:+28599762 Msa0543130:CDS
AAAATGAGAGTTATATATAT+TGG 0.422561 4_1:-28599383 None:intergenic
ACCATTGCGGCCGAGTTACC+TGG 0.444329 4_1:+28599869 Msa0543130:CDS
ATGTCACTAGATATGGTTGC+TGG 0.454705 4_1:+28599561 Msa0543130:CDS
ACTTTCATTGGACGAATGAC+CGG 0.459504 4_1:-28600275 None:intergenic
TACCTGCAAACTTGGGAAGT+TGG 0.466120 4_1:-28599592 None:intergenic
ATCTGTTCTTCCAGGTAACT+CGG 0.488002 4_1:-28599879 None:intergenic
ATTGCTGACATCTTTGCCGT+TGG 0.490043 4_1:+28600408 Msa0543130:CDS
GAGATTTGGGAACTGGATTG+AGG 0.491808 4_1:-28600046 None:intergenic
TACTATTCCACTTGGTGTGT+TGG 0.498616 4_1:-28600218 None:intergenic
CTTTCATTGGACGAATGACC+GGG 0.500764 4_1:-28600274 None:intergenic
CTAAGGCCTAATATCAAAAG+AGG 0.501825 4_1:+28599779 Msa0543130:CDS
TTTCAGGTCTTTCAAGGTGT+GGG 0.511467 4_1:+28599726 Msa0543130:intron
GGATTCATTTATAAAAGATG+TGG 0.515547 4_1:+28600168 Msa0543130:CDS
TGGGACATGTCATCCTCATA+TGG 0.519430 4_1:-28600373 None:intergenic
ATTTCAGGTCTTTCAAGGTG+TGG 0.520974 4_1:+28599725 Msa0543130:intron
GATATATCTCTCCCTTGTGT+GGG 0.527770 4_1:-28600007 None:intergenic
GGATATATCTCTCCCTTGTG+TGG 0.530263 4_1:-28600008 None:intergenic
TCCAGGTAACTCGGCCGCAA+TGG 0.530910 4_1:-28599870 None:intergenic
AAAATTAGTGGAATGAGGAA+AGG 0.534235 4_1:+28599500 Msa0543130:CDS
AAACTTCACTCAAGAAGAAG+AGG 0.534788 4_1:+28599802 Msa0543130:CDS
CCCAAAATCATCCAAAGTAG+TGG 0.535258 4_1:-28600140 None:intergenic
TATTAATTACCTGCAAACTT+GGG 0.536627 4_1:-28599599 None:intergenic
ATAATGAAGTGAAGAACCAT+TGG 0.547695 4_1:+28599900 Msa0543130:CDS
GTGACAAAATTAGTGGAATG+AGG 0.554265 4_1:+28599495 Msa0543130:CDS
AAATTAGTGGAATGAGGAAA+GGG 0.554513 4_1:+28599501 Msa0543130:CDS
AAATGGGGATAAAGGGCCCT+TGG 0.573461 4_1:-28600074 None:intergenic
GATATTTCCAACACACCAAG+TGG 0.595510 4_1:+28600211 Msa0543130:CDS
GTGGAATGAGGAAAGGGACA+TGG 0.609703 4_1:+28599507 Msa0543130:CDS
TCTTAAGGGAAGTATGCCAA+TGG 0.614883 4_1:-28599916 None:intergenic
AAAGATGTCAGCAATTGTGT+TGG 0.616881 4_1:-28600400 None:intergenic
TTCACTAGATGATGAAAATG+GGG 0.618182 4_1:-28600089 None:intergenic
GAAATTATTGAACCCACACA+AGG 0.622478 4_1:+28599995 Msa0543130:CDS
GTGGGAAGAGTTGTAGATTG+AGG 0.631661 4_1:+28599744 Msa0543130:CDS
TCAGCAATTGTGTTGGAACG+TGG 0.632729 4_1:-28600393 None:intergenic
TTCCCAAATCTCAGACACCA+AGG 0.638261 4_1:+28600057 Msa0543130:CDS
GAATAGATGGTCGACCATTG+CGG 0.650619 4_1:+28599856 Msa0543130:CDS
GGAACTGTGATATGAAGATG+TGG 0.659577 4_1:-28600119 None:intergenic
TCCCAAATCTCAGACACCAA+GGG 0.664108 4_1:+28600058 Msa0543130:CDS
GGAAGAGTTGTAGATTGAGG+TGG 0.677125 4_1:+28599747 Msa0543130:CDS
CAGCAATTGTGTTGGAACGT+GGG 0.689433 4_1:-28600392 None:intergenic
AAATTATTGAACCCACACAA+GGG 0.718502 4_1:+28599996 Msa0543130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGAGAGTTATATATAT+TGG - chr4_1:28599386-28599405 None:intergenic 15.0%
!! GGTAATTAATATATAAAACT+TGG + chr4_1:28599611-28599630 Msa0543130:intron 15.0%
!!! TTCAATAATTTCTTTTGATT+TGG - chr4_1:28599987-28600006 None:intergenic 15.0%
!! AAACACAAATCAAATTTATT+TGG + chr4_1:28600502-28600521 Msa0543130:three_prime_UTR 15.0%
!! AACACAAATCAAATTTATTT+GGG + chr4_1:28600503-28600522 Msa0543130:three_prime_UTR 15.0%
!! AAAATGAGAGTTATATATAT+TGG - chr4_1:28599386-28599405 None:intergenic 15.0%
!! GGTAATTAATATATAAAACT+TGG + chr4_1:28599611-28599630 Msa0543130:intron 15.0%
!!! TTCAATAATTTCTTTTGATT+TGG - chr4_1:28599987-28600006 None:intergenic 15.0%
!!! ATTGCATTGTTTTTTATTTC+AGG + chr4_1:28599710-28599729 Msa0543130:intron 20.0%
!!! AATAATTTCTTTTGATTTGG+TGG - chr4_1:28599984-28600003 None:intergenic 20.0%
!! CTATAGTATATGATGATATT+TGG + chr4_1:28600446-28600465 Msa0543130:CDS 20.0%
!!! ATTGCATTGTTTTTTATTTC+AGG + chr4_1:28599710-28599729 Msa0543130:intron 20.0%
!!! AATAATTTCTTTTGATTTGG+TGG - chr4_1:28599984-28600003 None:intergenic 20.0%
!! CTATAGTATATGATGATATT+TGG + chr4_1:28600446-28600465 Msa0543130:CDS 20.0%
! ACAAAAACTTATTGCTAAGA+TGG + chr4_1:28599457-28599476 Msa0543130:exon 25.0%
! TATTAATTACCTGCAAACTT+GGG - chr4_1:28599602-28599621 None:intergenic 25.0%
! ATATTAATTACCTGCAAACT+TGG - chr4_1:28599603-28599622 None:intergenic 25.0%
! ATGATTCTTGTGAAAAATTG+TGG + chr4_1:28599662-28599681 Msa0543130:intron 25.0%
!!! TTTTTATTTCAGGTCTTTCA+AGG + chr4_1:28599720-28599739 Msa0543130:intron 25.0%
!! AAGTTTCCTCTTTTGATATT+AGG - chr4_1:28599788-28599807 None:intergenic 25.0%
! ATTCACTAGATGATGAAAAT+GGG - chr4_1:28600093-28600112 None:intergenic 25.0%
! AATTCACTAGATGATGAAAA+TGG - chr4_1:28600094-28600113 None:intergenic 25.0%
! GGATTCATTTATAAAAGATG+TGG + chr4_1:28600168-28600187 Msa0543130:CDS 25.0%
! ATCCATAACAAAACTTTCAT+TGG - chr4_1:28600290-28600309 None:intergenic 25.0%
!!! TTTGTTATGGATAACGATTT+TGG + chr4_1:28600298-28600317 Msa0543130:CDS 25.0%
! GAAAAATATTCAGATTCCAA+CGG - chr4_1:28600427-28600446 None:intergenic 25.0%
! ACAAAAACTTATTGCTAAGA+TGG + chr4_1:28599457-28599476 Msa0543130:exon 25.0%
! TATTAATTACCTGCAAACTT+GGG - chr4_1:28599602-28599621 None:intergenic 25.0%
! ATATTAATTACCTGCAAACT+TGG - chr4_1:28599603-28599622 None:intergenic 25.0%
! ATGATTCTTGTGAAAAATTG+TGG + chr4_1:28599662-28599681 Msa0543130:intron 25.0%
!!! TTTTTATTTCAGGTCTTTCA+AGG + chr4_1:28599720-28599739 Msa0543130:intron 25.0%
!! AAGTTTCCTCTTTTGATATT+AGG - chr4_1:28599788-28599807 None:intergenic 25.0%
! ATTCACTAGATGATGAAAAT+GGG - chr4_1:28600093-28600112 None:intergenic 25.0%
! AATTCACTAGATGATGAAAA+TGG - chr4_1:28600094-28600113 None:intergenic 25.0%
! GGATTCATTTATAAAAGATG+TGG + chr4_1:28600168-28600187 Msa0543130:CDS 25.0%
! ATCCATAACAAAACTTTCAT+TGG - chr4_1:28600290-28600309 None:intergenic 25.0%
!!! TTTGTTATGGATAACGATTT+TGG + chr4_1:28600298-28600317 Msa0543130:CDS 25.0%
! GAAAAATATTCAGATTCCAA+CGG - chr4_1:28600427-28600446 None:intergenic 25.0%
AAAATTAGTGGAATGAGGAA+AGG + chr4_1:28599500-28599519 Msa0543130:CDS 30.0%
AAATTAGTGGAATGAGGAAA+GGG + chr4_1:28599501-28599520 Msa0543130:CDS 30.0%
ATTGCTTATGTCACTAGATA+TGG + chr4_1:28599554-28599573 Msa0543130:CDS 30.0%
ATAAAAAGCTTGGGAATAGA+TGG + chr4_1:28599843-28599862 Msa0543130:CDS 30.0%
ATAATGAAGTGAAGAACCAT+TGG + chr4_1:28599900-28599919 Msa0543130:CDS 30.0%
ATCTATAGCTCTCTTCTTAA+GGG - chr4_1:28599933-28599952 None:intergenic 30.0%
TATCTATAGCTCTCTTCTTA+AGG - chr4_1:28599934-28599953 None:intergenic 30.0%
!!! TTCTTTTGATTTGGTGGATT+TGG - chr4_1:28599978-28599997 None:intergenic 30.0%
AAATTATTGAACCCACACAA+GGG + chr4_1:28599996-28600015 Msa0543130:CDS 30.0%
TTGAGGAGTAATTTGGTAAA+TGG - chr4_1:28600032-28600051 None:intergenic 30.0%
ATGATGAAAATGGGGATAAA+GGG - chr4_1:28600084-28600103 None:intergenic 30.0%
TTCACTAGATGATGAAAATG+GGG - chr4_1:28600092-28600111 None:intergenic 30.0%
! AAGATGTGGATGAAAACTTT+TGG + chr4_1:28600182-28600201 Msa0543130:CDS 30.0%
!! TTGTTTTGTACTATTCCACT+TGG - chr4_1:28600229-28600248 None:intergenic 30.0%
!!! GTCCAATGAAAGTTTTGTTA+TGG + chr4_1:28600285-28600304 Msa0543130:CDS 30.0%
! AAGCTTTTTAGATGCTTACA+AGG + chr4_1:28600321-28600340 Msa0543130:CDS 30.0%
! TGATATTTGGAGTTGAGTTA+AGG + chr4_1:28600459-28600478 Msa0543130:exon 30.0%
AAAATTAGTGGAATGAGGAA+AGG + chr4_1:28599500-28599519 Msa0543130:CDS 30.0%
AAATTAGTGGAATGAGGAAA+GGG + chr4_1:28599501-28599520 Msa0543130:CDS 30.0%
ATTGCTTATGTCACTAGATA+TGG + chr4_1:28599554-28599573 Msa0543130:CDS 30.0%
ATAAAAAGCTTGGGAATAGA+TGG + chr4_1:28599843-28599862 Msa0543130:CDS 30.0%
ATAATGAAGTGAAGAACCAT+TGG + chr4_1:28599900-28599919 Msa0543130:CDS 30.0%
ATCTATAGCTCTCTTCTTAA+GGG - chr4_1:28599933-28599952 None:intergenic 30.0%
TATCTATAGCTCTCTTCTTA+AGG - chr4_1:28599934-28599953 None:intergenic 30.0%
!!! TTCTTTTGATTTGGTGGATT+TGG - chr4_1:28599978-28599997 None:intergenic 30.0%
AAATTATTGAACCCACACAA+GGG + chr4_1:28599996-28600015 Msa0543130:CDS 30.0%
TTGAGGAGTAATTTGGTAAA+TGG - chr4_1:28600032-28600051 None:intergenic 30.0%
ATGATGAAAATGGGGATAAA+GGG - chr4_1:28600084-28600103 None:intergenic 30.0%
TTCACTAGATGATGAAAATG+GGG - chr4_1:28600092-28600111 None:intergenic 30.0%
! AAGATGTGGATGAAAACTTT+TGG + chr4_1:28600182-28600201 Msa0543130:CDS 30.0%
!! TTGTTTTGTACTATTCCACT+TGG - chr4_1:28600229-28600248 None:intergenic 30.0%
!!! GTCCAATGAAAGTTTTGTTA+TGG + chr4_1:28600285-28600304 Msa0543130:CDS 30.0%
! AAGCTTTTTAGATGCTTACA+AGG + chr4_1:28600321-28600340 Msa0543130:CDS 30.0%
! TGATATTTGGAGTTGAGTTA+AGG + chr4_1:28600459-28600478 Msa0543130:exon 30.0%
! CCACTAATTTTGTCACATGA+AGG - chr4_1:28599491-28599510 None:intergenic 35.0%
CCTTCATGTGACAAAATTAG+TGG + chr4_1:28599488-28599507 Msa0543130:CDS 35.0%
GTGACAAAATTAGTGGAATG+AGG + chr4_1:28599495-28599514 Msa0543130:CDS 35.0%
ATAAAACTTGGACCTGAAGT+TGG + chr4_1:28599623-28599642 Msa0543130:intron 35.0%
AAAGTCCAATATCCAACTTC+AGG - chr4_1:28599638-28599657 None:intergenic 35.0%
CTAAGGCCTAATATCAAAAG+AGG + chr4_1:28599779-28599798 Msa0543130:CDS 35.0%
AAACTTCACTCAAGAAGAAG+AGG + chr4_1:28599802-28599821 Msa0543130:CDS 35.0%
ATCCGAATGCATAAAAAGCT+TGG + chr4_1:28599833-28599852 Msa0543130:CDS 35.0%
TCCGAATGCATAAAAAGCTT+GGG + chr4_1:28599834-28599853 Msa0543130:CDS 35.0%
! TCCCAAGCTTTTTATGCATT+CGG - chr4_1:28599838-28599857 None:intergenic 35.0%
ACTTCATTATCTGTTCTTCC+AGG - chr4_1:28599890-28599909 None:intergenic 35.0%
GAAATTATTGAACCCACACA+AGG + chr4_1:28599995-28600014 Msa0543130:CDS 35.0%
AACTGGATTGAGGAGTAATT+TGG - chr4_1:28600039-28600058 None:intergenic 35.0%
GATGATGAAAATGGGGATAA+AGG - chr4_1:28600085-28600104 None:intergenic 35.0%
ATATCACAGTTCCACTACTT+TGG + chr4_1:28600129-28600148 Msa0543130:CDS 35.0%
! TCCACTACTTTGGATGATTT+TGG + chr4_1:28600139-28600158 Msa0543130:CDS 35.0%
! CCACTACTTTGGATGATTTT+GGG + chr4_1:28600140-28600159 Msa0543130:CDS 35.0%
!!! TTTGGATGATTTTGGGTTTC+TGG + chr4_1:28600147-28600166 Msa0543130:CDS 35.0%
!!! AGTCAGCAGTTGATAGTTTT+TGG + chr4_1:28600344-28600363 Msa0543130:CDS 35.0%
! TTTTTGGACACAACCATATG+AGG + chr4_1:28600360-28600379 Msa0543130:CDS 35.0%
AAAGATGTCAGCAATTGTGT+TGG - chr4_1:28600403-28600422 None:intergenic 35.0%
! CCACTAATTTTGTCACATGA+AGG - chr4_1:28599491-28599510 None:intergenic 35.0%
CCTTCATGTGACAAAATTAG+TGG + chr4_1:28599488-28599507 Msa0543130:CDS 35.0%
GTGACAAAATTAGTGGAATG+AGG + chr4_1:28599495-28599514 Msa0543130:CDS 35.0%
ATAAAACTTGGACCTGAAGT+TGG + chr4_1:28599623-28599642 Msa0543130:intron 35.0%
AAAGTCCAATATCCAACTTC+AGG - chr4_1:28599638-28599657 None:intergenic 35.0%
CTAAGGCCTAATATCAAAAG+AGG + chr4_1:28599779-28599798 Msa0543130:CDS 35.0%
AAACTTCACTCAAGAAGAAG+AGG + chr4_1:28599802-28599821 Msa0543130:CDS 35.0%
ATCCGAATGCATAAAAAGCT+TGG + chr4_1:28599833-28599852 Msa0543130:CDS 35.0%
TCCGAATGCATAAAAAGCTT+GGG + chr4_1:28599834-28599853 Msa0543130:CDS 35.0%
! TCCCAAGCTTTTTATGCATT+CGG - chr4_1:28599838-28599857 None:intergenic 35.0%
ACTTCATTATCTGTTCTTCC+AGG - chr4_1:28599890-28599909 None:intergenic 35.0%
GAAATTATTGAACCCACACA+AGG + chr4_1:28599995-28600014 Msa0543130:CDS 35.0%
AACTGGATTGAGGAGTAATT+TGG - chr4_1:28600039-28600058 None:intergenic 35.0%
GATGATGAAAATGGGGATAA+AGG - chr4_1:28600085-28600104 None:intergenic 35.0%
ATATCACAGTTCCACTACTT+TGG + chr4_1:28600129-28600148 Msa0543130:CDS 35.0%
! TCCACTACTTTGGATGATTT+TGG + chr4_1:28600139-28600158 Msa0543130:CDS 35.0%
! CCACTACTTTGGATGATTTT+GGG + chr4_1:28600140-28600159 Msa0543130:CDS 35.0%
!!! TTTGGATGATTTTGGGTTTC+TGG + chr4_1:28600147-28600166 Msa0543130:CDS 35.0%
!!! AGTCAGCAGTTGATAGTTTT+TGG + chr4_1:28600344-28600363 Msa0543130:CDS 35.0%
! TTTTTGGACACAACCATATG+AGG + chr4_1:28600360-28600379 Msa0543130:CDS 35.0%
AAAGATGTCAGCAATTGTGT+TGG - chr4_1:28600403-28600422 None:intergenic 35.0%
ATGTCACTAGATATGGTTGC+TGG + chr4_1:28599561-28599580 Msa0543130:CDS 40.0%
CTAGATATGGTTGCTGGAAT+TGG + chr4_1:28599567-28599586 Msa0543130:CDS 40.0%
TTGGACCTGAAGTTGGATAT+TGG + chr4_1:28599630-28599649 Msa0543130:intron 40.0%
! ATTTCAGGTCTTTCAAGGTG+TGG + chr4_1:28599725-28599744 Msa0543130:intron 40.0%
! TTTCAGGTCTTTCAAGGTGT+GGG + chr4_1:28599726-28599745 Msa0543130:intron 40.0%
TGAGGTGGCTGAATTATCTA+AGG + chr4_1:28599762-28599781 Msa0543130:CDS 40.0%
ATCTGTTCTTCCAGGTAACT+CGG - chr4_1:28599882-28599901 None:intergenic 40.0%
! TCTTAAGGGAAGTATGCCAA+TGG - chr4_1:28599919-28599938 None:intergenic 40.0%
GATATATCTCTCCCTTGTGT+GGG - chr4_1:28600010-28600029 None:intergenic 40.0%
GGAACTGTGATATGAAGATG+TGG - chr4_1:28600122-28600141 None:intergenic 40.0%
CCCAAAATCATCCAAAGTAG+TGG - chr4_1:28600143-28600162 None:intergenic 40.0%
GATATTTCCAACACACCAAG+TGG + chr4_1:28600211-28600230 Msa0543130:CDS 40.0%
!! TACTATTCCACTTGGTGTGT+TGG - chr4_1:28600221-28600240 None:intergenic 40.0%
!!! GATGCTTTTTTAGTGTCTCC+CGG + chr4_1:28600256-28600275 Msa0543130:CDS 40.0%
ACTTTCATTGGACGAATGAC+CGG - chr4_1:28600278-28600297 None:intergenic 40.0%
ATGTCACTAGATATGGTTGC+TGG + chr4_1:28599561-28599580 Msa0543130:CDS 40.0%
CTAGATATGGTTGCTGGAAT+TGG + chr4_1:28599567-28599586 Msa0543130:CDS 40.0%
TTGGACCTGAAGTTGGATAT+TGG + chr4_1:28599630-28599649 Msa0543130:intron 40.0%
! ATTTCAGGTCTTTCAAGGTG+TGG + chr4_1:28599725-28599744 Msa0543130:intron 40.0%
! TTTCAGGTCTTTCAAGGTGT+GGG + chr4_1:28599726-28599745 Msa0543130:intron 40.0%
TGAGGTGGCTGAATTATCTA+AGG + chr4_1:28599762-28599781 Msa0543130:CDS 40.0%
ATCTGTTCTTCCAGGTAACT+CGG - chr4_1:28599882-28599901 None:intergenic 40.0%
! TCTTAAGGGAAGTATGCCAA+TGG - chr4_1:28599919-28599938 None:intergenic 40.0%
GATATATCTCTCCCTTGTGT+GGG - chr4_1:28600010-28600029 None:intergenic 40.0%
GGAACTGTGATATGAAGATG+TGG - chr4_1:28600122-28600141 None:intergenic 40.0%
CCCAAAATCATCCAAAGTAG+TGG - chr4_1:28600143-28600162 None:intergenic 40.0%
GATATTTCCAACACACCAAG+TGG + chr4_1:28600211-28600230 Msa0543130:CDS 40.0%
!! TACTATTCCACTTGGTGTGT+TGG - chr4_1:28600221-28600240 None:intergenic 40.0%
!!! GATGCTTTTTTAGTGTCTCC+CGG + chr4_1:28600256-28600275 Msa0543130:CDS 40.0%
ACTTTCATTGGACGAATGAC+CGG - chr4_1:28600278-28600297 None:intergenic 40.0%
TACCTGCAAACTTGGGAAGT+TGG - chr4_1:28599595-28599614 None:intergenic 45.0%
GTGGGAAGAGTTGTAGATTG+AGG + chr4_1:28599744-28599763 Msa0543130:CDS 45.0%
GGAAGAGTTGTAGATTGAGG+TGG + chr4_1:28599747-28599766 Msa0543130:CDS 45.0%
GAATAGATGGTCGACCATTG+CGG + chr4_1:28599856-28599875 Msa0543130:CDS 45.0%
GGATATATCTCTCCCTTGTG+TGG - chr4_1:28600011-28600030 None:intergenic 45.0%
GAGATTTGGGAACTGGATTG+AGG - chr4_1:28600049-28600068 None:intergenic 45.0%
TTCCCAAATCTCAGACACCA+AGG + chr4_1:28600057-28600076 Msa0543130:CDS 45.0%
TCCCAAATCTCAGACACCAA+GGG + chr4_1:28600058-28600077 Msa0543130:CDS 45.0%
CTTTCATTGGACGAATGACC+GGG - chr4_1:28600277-28600296 None:intergenic 45.0%
TGGGACATGTCATCCTCATA+TGG - chr4_1:28600376-28600395 None:intergenic 45.0%
CAGCAATTGTGTTGGAACGT+GGG - chr4_1:28600395-28600414 None:intergenic 45.0%
TCAGCAATTGTGTTGGAACG+TGG - chr4_1:28600396-28600415 None:intergenic 45.0%
ATTGCTGACATCTTTGCCGT+TGG + chr4_1:28600408-28600427 Msa0543130:CDS 45.0%
TACCTGCAAACTTGGGAAGT+TGG - chr4_1:28599595-28599614 None:intergenic 45.0%
GTGGGAAGAGTTGTAGATTG+AGG + chr4_1:28599744-28599763 Msa0543130:CDS 45.0%
GGAAGAGTTGTAGATTGAGG+TGG + chr4_1:28599747-28599766 Msa0543130:CDS 45.0%
GAATAGATGGTCGACCATTG+CGG + chr4_1:28599856-28599875 Msa0543130:CDS 45.0%
GGATATATCTCTCCCTTGTG+TGG - chr4_1:28600011-28600030 None:intergenic 45.0%
GAGATTTGGGAACTGGATTG+AGG - chr4_1:28600049-28600068 None:intergenic 45.0%
TTCCCAAATCTCAGACACCA+AGG + chr4_1:28600057-28600076 Msa0543130:CDS 45.0%
TCCCAAATCTCAGACACCAA+GGG + chr4_1:28600058-28600077 Msa0543130:CDS 45.0%
CTTTCATTGGACGAATGACC+GGG - chr4_1:28600277-28600296 None:intergenic 45.0%
TGGGACATGTCATCCTCATA+TGG - chr4_1:28600376-28600395 None:intergenic 45.0%
CAGCAATTGTGTTGGAACGT+GGG - chr4_1:28600395-28600414 None:intergenic 45.0%
TCAGCAATTGTGTTGGAACG+TGG - chr4_1:28600396-28600415 None:intergenic 45.0%
ATTGCTGACATCTTTGCCGT+TGG + chr4_1:28600408-28600427 Msa0543130:CDS 45.0%
GTGGAATGAGGAAAGGGACA+TGG + chr4_1:28599507-28599526 Msa0543130:CDS 50.0%
! GGTGTCTGAGATTTGGGAAC+TGG - chr4_1:28600056-28600075 None:intergenic 50.0%
!! GCCCTTGGTGTCTGAGATTT+GGG - chr4_1:28600062-28600081 None:intergenic 50.0%
AAATGGGGATAAAGGGCCCT+TGG - chr4_1:28600077-28600096 None:intergenic 50.0%
GTGGAATGAGGAAAGGGACA+TGG + chr4_1:28599507-28599526 Msa0543130:CDS 50.0%
! GGTGTCTGAGATTTGGGAAC+TGG - chr4_1:28600056-28600075 None:intergenic 50.0%
!! GCCCTTGGTGTCTGAGATTT+GGG - chr4_1:28600062-28600081 None:intergenic 50.0%
AAATGGGGATAAAGGGCCCT+TGG - chr4_1:28600077-28600096 None:intergenic 50.0%
CGCCAACTTCCCAAGTTTGC+AGG + chr4_1:28599590-28599609 Msa0543130:CDS 55.0%
!! GGCCCTTGGTGTCTGAGATT+TGG - chr4_1:28600063-28600082 None:intergenic 55.0%
CGCCAACTTCCCAAGTTTGC+AGG + chr4_1:28599590-28599609 Msa0543130:CDS 55.0%
!! GGCCCTTGGTGTCTGAGATT+TGG - chr4_1:28600063-28600082 None:intergenic 55.0%
ACCATTGCGGCCGAGTTACC+TGG + chr4_1:28599869-28599888 Msa0543130:CDS 60.0%
TCCAGGTAACTCGGCCGCAA+TGG - chr4_1:28599873-28599892 None:intergenic 60.0%
ACCATTGCGGCCGAGTTACC+TGG + chr4_1:28599869-28599888 Msa0543130:CDS 60.0%
TCCAGGTAACTCGGCCGCAA+TGG - chr4_1:28599873-28599892 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 28599381 28600524 28599381 ID=Msa0543130;Name=Msa0543130
chr4_1 mRNA 28599381 28600524 28599381 ID=Msa0543130-mRNA-1;Parent=Msa0543130;Name=Msa0543130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=95|1|1|1|1|1|2|50|292
chr4_1 exon 28599381 28599611 28599381 ID=Msa0543130-mRNA-1:exon:7754;Parent=Msa0543130-mRNA-1
chr4_1 exon 28599732 28600524 28599732 ID=Msa0543130-mRNA-1:exon:7755;Parent=Msa0543130-mRNA-1
chr4_1 five_prime_UTR 28599381 28599475 28599381 ID=Msa0543130-mRNA-1:five_prime_utr;Parent=Msa0543130-mRNA-1
chr4_1 CDS 28599476 28599611 28599476 ID=Msa0543130-mRNA-1:cds;Parent=Msa0543130-mRNA-1
chr4_1 CDS 28599732 28600474 28599732 ID=Msa0543130-mRNA-1:cds;Parent=Msa0543130-mRNA-1
chr4_1 three_prime_UTR 28600475 28600524 28600475 ID=Msa0543130-mRNA-1:three_prime_utr;Parent=Msa0543130-mRNA-1
Gene Sequence

>Msa0543130

ATGGCGAGAACTCCTTCATGTGACAAAATTAGTGGAATGAGGAAAGGGACATGGACTGCTGAAGAAGATAAGAAATTAATTGCTTATGTCACTAGATATGGTTGCTGGAATTGGCGCCAACTTCCCAAGTTTGCAGGTCTTTCAAGGTGTGGGAAGAGTTGTAGATTGAGGTGGCTGAATTATCTAAGGCCTAATATCAAAAGAGGAAACTTCACTCAAGAAGAAGAGGAGTTGATTATCCGAATGCATAAAAAGCTTGGGAATAGATGGTCGACCATTGCGGCCGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAACCATTGGCATACTTCCCTTAAGAAGAGAGCTATAGATAACATAGTCACAAATGAAGAAACCAAATCCACCAAATCAAAAGAAATTATTGAACCCACACAAGGGAGAGATATATCCATTTACCAAATTACTCCTCAATCCAGTTCCCAAATCTCAGACACCAAGGGCCCTTTATCCCCATTTTCATCATCTAGTGAATTCTCTTCCACATCTTCATATCACAGTTCCACTACTTTGGATGATTTTGGGTTTCTGGATTCATTTATAAAAGATGTGGATGAAAACTTTTGGCTTAATGATATTTCCAACACACCAAGTGGAATAGTACAAAACAATACTAATGATGCTTTTTTAGTGTCTCCCGGTCATTCGTCCAATGAAAGTTTTGTTATGGATAACGATTTTGGAAGCTTTTTAGATGCTTACAAGGAGTCAGCAGTTGATAGTTTTTGGACACAACCATATGAGGATGACATGTCCCACGTTCCAACACAATTGCTGACATCTTTGCCGTTGGAATCTGAATATTTTTCTATAGTATATGATGATATTTGGAGTTGA
Protein sequence

>Msa0543130

MARTPSCDKISGMRKGTWTAEEDKKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIKRGNFTQEEEELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNIVTNEETKSTKSKEIIEPTQGRDISIYQITPQSSSQISDTKGPLSPFSSSSEFSSTSSYHSSTTLDDFGFLDSFIKDVDENFWLNDISNTPSGIVQNNTNDAFLVSPGHSSNESFVMDNDFGSFLDAYKESAVDSFWTQPYEDDMSHVPTQLLTSLPLESEYFSIVYDDIWS*