AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0572560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0572560 MtrunA17_Chr8g0387981 97.790 362 7 1 1 362 1 361 0.0 733
Msa0572560 MtrunA17_Chr7g0275531 36.486 370 184 10 1 362 1 327 3.03e-57 189
Msa0572560 MtrunA17_Chr3g0126391 37.600 375 169 16 12 362 7 340 9.41e-56 186
Msa0572560 MtrunA17_Chr8g0347251 34.771 371 192 12 1 350 1 342 2.09e-51 174
Msa0572560 MtrunA17_Chr7g0244981 32.178 202 105 5 1 191 1 181 7.14e-24 99.8
Msa0572560 MtrunA17_Chr8g0334541 33.511 188 99 5 13 198 6 169 1.09e-22 96.3
Msa0572560 MtrunA17_Chr2g0315381 30.583 206 108 6 8 191 11 203 2.80e-22 95.9
Msa0572560 MtrunA17_Chr7g0244971 32.143 196 95 5 9 191 12 182 2.25e-20 90.1
Msa0572560 MtrunA17_Chr2g0315361 29.327 208 115 6 6 191 10 207 5.52e-20 89.4
Msa0572560 MtrunA17_Chr2g0315371 28.692 237 136 6 1 219 1 222 4.35e-19 86.7
Msa0572560 MtrunA17_Chr8g0350621 28.718 195 101 5 13 196 8 175 6.03e-19 85.5
Msa0572560 MtrunA17_Chr5g0428351 30.055 183 100 5 9 191 88 242 1.75e-17 82.0
Msa0572560 MtrunA17_Chr3g0128671 31.694 183 97 5 18 191 23 186 2.32e-17 81.6
Msa0572560 MtrunA17_Chr7g0238921 32.000 150 90 5 45 189 36 178 9.45e-16 77.0
Msa0572560 MtrunA17_Chr2g0284321 33.333 141 84 4 106 245 9 140 1.30e-15 75.1
Msa0572560 MtrunA17_Chr8g0348311 41.860 86 42 2 105 190 134 211 1.65e-15 76.6
Msa0572560 MtrunA17_Chr3g0079691 51.351 74 28 3 120 189 264 333 4.64e-15 76.6
Msa0572560 MtrunA17_Chr4g0051881 53.521 71 25 2 132 197 178 245 5.27e-15 75.1
Msa0572560 MtrunA17_Chr8g0383351 52.308 65 28 1 132 196 160 221 5.37e-15 73.6
Msa0572560 MtrunA17_Chr7g0248691 42.353 85 41 2 105 189 133 209 1.15e-14 73.9
Msa0572560 MtrunA17_Chr5g0418781 43.750 96 50 2 95 189 86 178 1.78e-14 72.8
Msa0572560 MtrunA17_Chr7g0270191 57.627 59 22 1 132 190 145 200 1.93e-14 73.2
Msa0572560 MtrunA17_Chr3g0129361 51.471 68 30 1 132 199 144 208 2.07e-14 71.6
Msa0572560 MtrunA17_Chr3g0139021 44.872 78 40 2 118 194 299 374 2.78e-14 73.6
Msa0572560 MtrunA17_Chr5g0431811 50.000 62 31 0 130 191 670 731 2.96e-14 74.3
Msa0572560 MtrunA17_Chr7g0270051 43.678 87 44 2 106 189 24 108 3.10e-14 72.0
Msa0572560 MtrunA17_Chr7g0228941 47.887 71 34 2 120 189 39 107 3.83e-14 68.6
Msa0572560 MtrunA17_Chr5g0401821 43.529 85 43 3 106 189 174 254 4.48e-14 71.6
Msa0572560 MtrunA17_Chr5g0443131 55.172 58 23 1 132 189 157 211 4.64e-14 72.0
Msa0572560 MtrunA17_Chr1g0194481 42.222 90 44 2 101 190 132 213 4.89e-14 72.4
Msa0572560 MtrunA17_Chr7g0218081 44.048 84 39 2 106 189 389 464 6.61e-14 72.8
Msa0572560 MtrunA17_Chr7g0218081 49.206 63 28 2 127 189 223 281 1.63e-13 71.6
Msa0572560 MtrunA17_Chr7g0263531 46.575 73 35 2 117 189 174 242 8.42e-14 72.4
Msa0572560 MtrunA17_Chr7g0263531 50.704 71 29 2 119 189 351 415 1.82e-13 71.2
Msa0572560 MtrunA17_Chr8g0379461 39.474 114 61 3 82 189 20 131 1.32e-13 69.7
Msa0572560 MtrunA17_Chr1g0147881 32.787 122 68 4 71 189 207 317 1.38e-13 70.9
Msa0572560 MtrunA17_Chr1g0202461 38.144 97 50 3 96 189 227 316 1.65e-13 71.2
Msa0572560 MtrunA17_Chr7g0249311 55.172 58 22 2 132 189 179 232 2.23e-13 71.2
Msa0572560 MtrunA17_Chr7g0224801 54.237 59 24 1 132 190 93 148 3.85e-13 67.0
Msa0572560 MtrunA17_Chr2g0294231 52.542 59 25 1 132 190 203 258 4.57e-13 69.7
Msa0572560 MtrunA17_Chr4g0042831 47.619 63 30 1 127 189 140 199 5.72e-13 69.3
Msa0572560 MtrunA17_Chr4g0042831 53.448 58 24 1 132 189 278 332 3.26e-12 67.4
Msa0572560 MtrunA17_Chr4g0060271 34.694 147 71 6 57 189 175 310 5.85e-13 70.1
Msa0572560 MtrunA17_Chr7g0270831 49.315 73 34 2 118 189 201 271 1.03e-12 68.9
Msa0572560 MtrunA17_Chr8g0335811 40.000 90 46 2 100 189 127 208 1.03e-12 67.0
Msa0572560 MtrunA17_Chr8g0387501 43.077 65 35 1 125 189 122 184 1.21e-12 67.4
Msa0572560 MtrunA17_Chr7g0248721 37.903 124 55 7 94 204 97 211 1.31e-12 66.6
Msa0572560 MtrunA17_Chr1g0184691 49.123 57 27 1 133 189 294 348 1.48e-12 68.2
Msa0572560 MtrunA17_Chr4g0053281 47.368 57 28 1 133 189 267 321 1.56e-12 67.8
Msa0572560 MtrunA17_Chr3g0099641 35.484 124 62 5 77 200 207 312 1.57e-12 68.6
Msa0572560 MtrunA17_Chr4g0004911 32.857 140 78 4 132 264 184 314 2.16e-12 68.2
Msa0572560 MtrunA17_Chr4g0004911 48.276 58 27 1 132 189 336 390 7.12e-11 63.5
Msa0572560 MtrunA17_Chr5g0418191 51.724 58 25 1 132 189 320 374 2.32e-12 67.8
Msa0572560 MtrunA17_Chr5g0418191 49.206 63 28 2 127 189 146 204 8.92e-12 66.2
Msa0572560 MtrunA17_Chr7g0243891 55.172 58 22 2 132 189 216 269 2.42e-12 68.2
Msa0572560 MtrunA17_Chr2g0288871 48.000 75 36 2 116 189 288 360 3.59e-12 67.4
Msa0572560 MtrunA17_Chr5g0432161 51.724 58 24 2 132 189 244 297 3.81e-12 67.4
Msa0572560 MtrunA17_Chr5g0432161 50.000 58 26 1 132 189 421 475 9.34e-11 63.2
Msa0572560 MtrunA17_Chr5g0445311 50.000 58 26 1 132 189 364 418 4.00e-12 67.4
Msa0572560 MtrunA17_Chr5g0445311 49.254 67 28 3 125 189 191 253 3.41e-11 64.7
Msa0572560 MtrunA17_Chr2g0319961 33.051 118 69 2 72 189 28 135 4.22e-12 65.9
Msa0572560 MtrunA17_Chr7g0249301 46.970 66 31 2 132 197 62 123 4.90e-12 66.6
Msa0572560 MtrunA17_Chr1g0150281 50.877 57 26 1 133 189 141 195 5.13e-12 65.9
Msa0572560 MtrunA17_Chr3g0106491 51.724 58 24 2 132 189 198 251 5.69e-12 67.0
Msa0572560 MtrunA17_Chr3g0106491 49.153 59 27 1 132 190 365 420 5.93e-11 63.5
Msa0572560 MtrunA17_Chr8g0386241 37.647 85 45 2 105 189 81 157 5.74e-12 63.9
Msa0572560 MtrunA17_Chr2g0322391 46.835 79 39 2 112 189 328 404 5.99e-12 67.0
Msa0572560 MtrunA17_Chr2g0333851 47.059 68 32 2 122 189 161 224 6.45e-12 65.9
Msa0572560 MtrunA17_Chr3g0101131 50.000 58 26 1 132 189 415 469 6.56e-12 66.6
Msa0572560 MtrunA17_Chr4g0071521 40.449 89 48 3 106 193 220 304 6.61e-12 65.9
Msa0572560 MtrunA17_Chr2g0293481 50.877 57 26 1 133 189 268 322 1.59e-11 65.5
Msa0572560 MtrunA17_Chr1g0188941 50.000 58 26 1 132 189 51 105 1.78e-11 60.8
Msa0572560 MtrunA17_Chr7g0216891 45.205 73 37 2 118 189 204 274 1.84e-11 65.5
Msa0572560 MtrunA17_Chr3g0136961 41.250 80 43 3 111 189 117 193 2.30e-11 63.9
Msa0572560 MtrunA17_Chr1g0189391 46.575 73 32 3 119 190 87 153 3.37e-11 63.9
Msa0572560 MtrunA17_Chr4g0068541 48.276 58 27 1 132 189 208 262 4.38e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0572560 AT4G11070.1 39.560 364 143 12 6 354 5 306 7.35e-66 211
Msa0572560 AT4G23810.1 44.755 286 119 7 5 260 7 283 1.58e-64 208
Msa0572560 AT4G11070.2 38.936 357 123 11 6 354 5 274 1.21e-62 202
Msa0572560 AT5G24110.1 39.234 209 93 7 7 205 10 194 6.08e-36 133
Msa0572560 AT2G46400.1 32.653 294 152 9 8 296 4 256 1.06e-33 127
Msa0572560 AT3G56400.1 36.464 181 102 5 12 191 11 179 2.57e-25 104
Msa0572560 AT2G40740.1 58.065 62 26 0 130 191 171 232 3.42e-20 90.1
Msa0572560 AT2G40740.3 58.065 62 26 0 130 191 180 241 4.10e-20 89.7
Msa0572560 AT2G40750.1 33.333 171 96 3 40 201 63 224 8.95e-20 89.7
Msa0572560 AT1G66550.2 35.862 145 81 4 54 191 23 162 1.29e-17 82.0
Msa0572560 AT1G66550.1 51.471 68 32 1 124 191 101 167 3.56e-17 80.9
Msa0572560 AT2G37260.3 36.567 134 72 3 61 189 198 323 3.14e-16 79.3
Msa0572560 AT2G37260.2 36.567 134 72 3 61 189 196 321 3.39e-16 79.3
Msa0572560 AT2G37260.1 36.567 134 72 3 61 189 278 403 3.76e-16 79.7
Msa0572560 AT5G45260.1 57.895 57 24 0 133 189 1209 1265 3.76e-16 80.5
Msa0572560 AT5G52830.1 46.512 86 39 2 105 190 143 221 1.26e-15 77.4
Msa0572560 AT1G66600.1 41.860 86 47 1 106 191 80 162 1.86e-15 75.5
Msa0572560 AT4G01250.1 41.860 86 42 2 104 189 106 183 2.31e-15 76.3
Msa0572560 AT4G18170.1 44.681 94 48 2 97 189 136 226 3.59e-15 75.9
Msa0572560 AT1G29860.1 58.621 58 21 1 132 189 136 190 4.58e-15 75.1
Msa0572560 AT5G41570.1 39.231 130 66 7 77 204 51 169 7.70e-15 72.4
Msa0572560 AT4G31550.2 34.783 138 68 5 73 193 172 304 1.07e-14 74.7
Msa0572560 AT1G64000.1 45.333 75 36 2 132 204 114 185 2.13e-14 71.6
Msa0572560 AT5G22570.1 30.570 193 114 4 4 196 2 174 2.25e-14 73.2
Msa0572560 AT5G49520.1 54.237 59 24 1 132 190 221 276 2.71e-14 73.9
Msa0572560 AT1G69310.4 42.857 91 43 3 103 193 123 204 3.60e-14 72.4
Msa0572560 AT1G69310.2 42.857 91 43 3 103 193 123 204 3.60e-14 72.4
Msa0572560 AT1G69310.1 42.857 91 43 3 103 193 123 204 3.60e-14 72.4
Msa0572560 AT1G66560.1 48.333 60 31 0 132 191 103 162 4.08e-14 72.0
Msa0572560 AT5G46350.1 55.172 58 23 1 132 189 183 237 6.49e-14 72.4
Msa0572560 AT1G80590.1 45.455 66 36 0 133 198 86 151 9.22e-14 70.5
Msa0572560 AT2G03340.1 34.746 118 58 3 132 249 415 513 1.10e-13 72.4
Msa0572560 AT2G03340.1 50.000 60 26 2 130 189 248 303 1.64e-11 65.9
Msa0572560 AT4G04450.2 45.349 86 44 2 105 189 170 253 1.21e-13 72.0
Msa0572560 AT1G29280.1 53.333 60 26 1 130 189 72 129 1.22e-13 70.5
Msa0572560 AT5G01900.1 47.458 59 31 0 133 191 111 169 1.45e-13 70.5
Msa0572560 AT2G23320.1 41.176 85 45 3 106 189 215 295 1.78e-13 70.9
Msa0572560 AT4G31550.1 51.613 62 26 2 133 193 247 305 1.85e-13 70.9
Msa0572560 AT4G39410.1 51.515 66 27 2 132 196 223 284 2.32e-13 70.5
Msa0572560 AT4G04450.1 45.349 86 44 2 105 189 264 347 2.96e-13 71.2
Msa0572560 AT2G38470.1 43.333 90 47 2 100 189 152 237 2.98e-13 71.2
Msa0572560 AT4G26440.1 53.125 64 26 2 130 193 176 235 4.48e-13 70.9
Msa0572560 AT4G26440.1 50.847 59 26 1 132 190 372 427 4.50e-11 64.7
Msa0572560 AT2G47260.1 43.820 89 46 2 103 190 144 229 4.99e-13 69.7
Msa0572560 AT2G44745.1 41.758 91 43 3 101 189 117 199 5.94e-13 67.8
Msa0572560 AT5G56270.1 55.000 60 23 2 130 189 271 326 7.05e-13 70.5
Msa0572560 AT3G01080.3 55.000 60 23 2 130 189 203 258 8.47e-13 68.9
Msa0572560 AT2G24570.1 38.835 103 57 4 89 189 200 298 1.04e-12 68.6
Msa0572560 AT5G07100.2 51.724 58 25 1 132 189 141 195 1.30e-12 67.0
Msa0572560 AT5G07100.2 45.763 59 29 1 131 189 23 78 1.98e-11 63.5
Msa0572560 AT5G07100.4 51.724 58 25 1 132 189 141 195 1.30e-12 67.0
Msa0572560 AT5G07100.4 45.763 59 29 1 131 189 23 78 1.98e-11 63.5
Msa0572560 AT5G07100.5 51.724 58 25 1 132 189 141 195 1.30e-12 67.0
Msa0572560 AT5G07100.5 45.763 59 29 1 131 189 23 78 1.98e-11 63.5
Msa0572560 AT5G07100.3 51.724 58 25 1 132 189 141 195 1.30e-12 67.0
Msa0572560 AT5G07100.3 45.763 59 29 1 131 189 23 78 1.98e-11 63.5
Msa0572560 AT5G07100.1 51.724 58 25 1 132 189 234 288 1.32e-12 68.2
Msa0572560 AT5G07100.1 45.763 59 29 1 131 189 116 171 2.04e-11 64.7
Msa0572560 AT4G24240.1 42.353 85 44 3 106 189 256 336 1.34e-12 68.6
Msa0572560 AT1G13960.1 51.724 58 25 1 132 189 409 463 1.42e-12 69.3
Msa0572560 AT1G13960.1 47.619 63 29 2 127 189 224 282 6.00e-12 67.4
Msa0572560 AT2G25000.2 50.000 58 27 1 132 189 103 158 1.49e-12 67.0
Msa0572560 AT2G25000.4 50.000 58 27 1 132 189 103 158 1.49e-12 67.0
Msa0572560 AT1G62300.1 45.679 81 41 2 110 189 289 367 1.50e-12 69.3
Msa0572560 AT3G01080.2 55.000 60 23 2 130 189 203 258 1.80e-12 68.6
Msa0572560 AT3G01080.2 51.724 58 25 1 132 189 344 398 4.91e-12 67.4
Msa0572560 AT3G01080.1 55.000 60 23 2 130 189 165 220 2.15e-12 68.2
Msa0572560 AT3G01080.1 51.724 58 25 1 132 189 306 360 6.79e-12 66.6
Msa0572560 AT2G46130.1 42.667 75 38 2 132 204 30 101 2.17e-12 63.5
Msa0572560 AT2G25000.3 50.000 58 27 1 132 189 125 180 2.28e-12 66.6
Msa0572560 AT1G13960.2 51.724 58 25 1 132 189 256 310 2.94e-12 67.8
Msa0572560 AT1G13960.2 47.619 63 29 2 127 189 71 129 1.09e-11 65.9
Msa0572560 AT2G34830.1 42.857 91 41 3 103 189 187 270 2.96e-12 67.8
Msa0572560 AT2G34830.2 42.857 91 41 3 103 189 196 279 3.03e-12 67.8
Msa0572560 AT2G25000.1 50.000 58 27 1 132 189 146 201 3.06e-12 66.6
Msa0572560 AT5G28650.1 40.476 84 47 2 106 189 237 317 3.41e-12 67.0
Msa0572560 AT4G23550.1 50.877 57 26 1 133 189 141 195 3.54e-12 67.0
Msa0572560 AT4G26640.7 44.000 75 33 2 132 200 341 412 5.03e-12 67.4
Msa0572560 AT4G26640.7 53.448 58 23 2 132 189 171 224 2.61e-11 65.1
Msa0572560 AT2G30250.1 52.632 57 24 1 133 189 329 382 5.07e-12 67.0
Msa0572560 AT4G26640.2 44.000 75 33 2 132 200 381 452 5.65e-12 67.4
Msa0572560 AT4G26640.2 53.448 58 23 2 132 189 211 264 2.74e-11 65.1
Msa0572560 AT3G58710.2 31.847 157 72 6 76 224 22 151 5.68e-12 65.9
Msa0572560 AT4G26640.1 44.000 75 33 2 132 200 309 380 6.10e-12 67.0
Msa0572560 AT4G26640.1 53.448 58 23 2 132 189 139 192 2.92e-11 65.1
Msa0572560 AT5G13080.1 50.847 59 26 1 132 190 67 122 6.79e-12 63.2
Msa0572560 AT2G04880.2 50.877 57 25 1 133 189 284 337 7.60e-12 66.6
Msa0572560 AT2G04880.2 35.714 140 74 5 62 189 29 164 9.01e-11 63.5
Msa0572560 AT4G26640.5 44.000 75 33 2 132 200 205 276 8.14e-12 66.2
Msa0572560 AT4G26640.5 53.448 58 23 2 132 189 35 88 3.30e-11 64.7
Msa0572560 AT4G26640.6 44.000 75 33 2 132 200 205 276 8.14e-12 66.2
Msa0572560 AT4G26640.6 53.448 58 23 2 132 189 35 88 3.30e-11 64.7
Msa0572560 AT4G26640.4 44.000 75 33 2 132 200 205 276 8.14e-12 66.2
Msa0572560 AT4G26640.4 53.448 58 23 2 132 189 35 88 3.30e-11 64.7
Msa0572560 AT4G26640.3 44.000 75 33 2 132 200 205 276 8.14e-12 66.2
Msa0572560 AT4G26640.3 53.448 58 23 2 132 189 35 88 3.30e-11 64.7
Msa0572560 AT2G04880.1 50.877 57 25 1 133 189 308 361 8.61e-12 66.6
Msa0572560 AT2G04880.1 35.714 140 74 5 62 189 29 164 6.86e-11 63.9
Msa0572560 AT1G18860.1 47.368 76 37 2 115 189 221 294 9.51e-12 66.6
Msa0572560 AT4G31800.2 48.276 58 28 1 132 189 111 166 1.09e-11 64.7
Msa0572560 AT5G15130.2 36.667 120 57 5 73 192 143 243 1.38e-11 66.2
Msa0572560 AT2G30590.1 33.945 109 68 3 82 189 263 368 1.40e-11 65.9
Msa0572560 AT3G04670.1 39.286 84 48 2 106 189 237 317 1.47e-11 65.5
Msa0572560 AT4G31800.1 48.276 58 28 1 132 189 176 231 1.50e-11 65.1
Msa0572560 AT5G15130.1 36.667 120 57 5 73 192 185 285 1.51e-11 65.9
Msa0572560 AT3G58710.1 37.895 95 48 3 130 224 69 152 1.73e-11 64.3
Msa0572560 AT5G45050.4 45.714 70 36 1 120 189 1029 1096 1.80e-11 66.2
Msa0572560 AT5G45050.1 45.714 70 36 1 120 189 1168 1235 1.89e-11 66.2
Msa0572560 AT5G45050.2 45.714 70 36 1 120 189 1140 1207 1.97e-11 66.2
Msa0572560 AT1G30650.1 42.857 91 41 3 103 189 189 272 2.18e-11 65.5
Msa0572560 AT5G43290.1 43.243 74 39 1 116 189 98 168 2.57e-11 63.9
Msa0572560 AT1G68150.1 29.897 194 115 7 8 189 106 290 4.74e-11 63.9
Msa0572560 AT4G01720.1 54.386 57 24 1 133 189 240 294 6.07e-11 63.9

Find 122 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAATATTATTATTATTA+TGG 0.158616 4_1:+75456152 None:intergenic
GTTGGATACTGAAGAAATTT+AGG 0.231623 4_1:+75457118 None:intergenic
TTCCTCTCACCTTGGATGTT+TGG 0.252288 4_1:+75456460 None:intergenic
GGAGTATTGAAAGGGAAATT+TGG 0.255776 4_1:+75455737 None:intergenic
ATCAAGTGGGAAACGGAAAT+TGG 0.267866 4_1:+75455775 None:intergenic
ACCTTCCCTTCCACTTCATA+TGG 0.287302 4_1:-75456031 Msa0572560:CDS
TAATTGTACTTGAGAATATA+TGG 0.299038 4_1:-75455701 Msa0572560:three_prime_UTR
AAATGGAGAATGAATGTAAC+TGG 0.315765 4_1:-75457018 Msa0572560:CDS
TCCCTTGTGCCAAGGGAATA+TGG 0.341878 4_1:+75456920 None:intergenic
GATGAGAAATAGTTTGATTC+TGG 0.343483 4_1:+75455908 None:intergenic
GTGATATATACAATACAAAA+TGG 0.344498 4_1:-75457035 Msa0572560:exon
TAGTTTGATTCTGGTGTTGC+TGG 0.345432 4_1:+75455917 None:intergenic
TTGGTAGACGCTGGGGATTC+CGG 0.347235 4_1:+75456788 None:intergenic
GGCTACAACTGGAGAAAATA+TGG 0.354359 4_1:-75456503 Msa0572560:CDS
ATATATTCTCAAGTACAATT+AGG 0.356477 4_1:+75455703 None:intergenic
TCCGCAACACACAGGACTGC+TGG 0.367448 4_1:-75456312 Msa0572560:CDS
CAAGGACACTTGTAAATTCC+TGG 0.368716 4_1:+75455482 None:intergenic
CATCTTCATTTGGTCCTTCA+AGG 0.372550 4_1:+75456525 None:intergenic
TCTTATCTGATCCATCCATT+TGG 0.372776 4_1:+75456565 None:intergenic
TCCGGTAACGAAGTTATTAC+TGG 0.373162 4_1:+75456806 None:intergenic
AGTGTCCTTGAAGTTAATAT+TGG 0.374554 4_1:-75455469 Msa0572560:three_prime_UTR
CTTATCTGATCCATCCATTT+GGG 0.376482 4_1:+75456566 None:intergenic
GCTTCTCAGTAAGAAACTAT+TGG 0.380333 4_1:-75457092 Msa0572560:five_prime_UTR
TCACTAAGGCCACTTATGTT+TGG 0.384302 4_1:-75455638 Msa0572560:three_prime_UTR
CAGTTGTAGCCATCTTCATT+TGG 0.394723 4_1:+75456515 None:intergenic
TCCAGTAATAACTTCGTTAC+CGG 0.409442 4_1:-75456807 Msa0572560:CDS
TCAAATGGAATGTGGTTTGT+TGG 0.411479 4_1:+75457189 None:intergenic
TAGTTCCAATATTAACTTCA+AGG 0.415506 4_1:+75455464 None:intergenic
TTCAACATGAATGACTTTGA+TGG 0.415973 4_1:-75455878 Msa0572560:CDS
AGGAAAGCATACATGTTCTC+AGG 0.418553 4_1:-75456230 Msa0572560:CDS
ATTATTATTATTATGGATGT+GGG 0.420968 4_1:+75456159 None:intergenic
AACAACCCTCGTTCAGAATC+CGG 0.427607 4_1:-75455848 Msa0572560:CDS
AATAGATTTGAAAATTCAAA+TGG 0.431973 4_1:+75457174 None:intergenic
GATACTATCTTCTTATGAAA+AGG 0.436019 4_1:-75456882 Msa0572560:CDS
TCGTTCAGAATCCGGCATTA+CGG 0.438155 4_1:-75455840 Msa0572560:CDS
AAATTTGGATCTATTTCCAC+TGG 0.446466 4_1:+75455752 None:intergenic
CCTTCCCTTCCACTTCATAT+GGG 0.447528 4_1:-75456030 Msa0572560:CDS
CTGGAGATAATAAGTGTGTC+TGG 0.447945 4_1:+75455936 None:intergenic
AGAATTTGTTACTGATGTAT+TGG 0.449729 4_1:+75455805 None:intergenic
CCTCTGAGCGAGGACTTTGA+TGG 0.453832 4_1:-75456758 Msa0572560:CDS
ACCTTGGATGTTTGGTGCCA+AGG 0.456940 4_1:+75456468 None:intergenic
TTGTGACTTATATGGCTCAA+TGG 0.457594 4_1:+75456198 None:intergenic
AACTTCTTGGTGATCTTGGA+AGG 0.459080 4_1:+75456733 None:intergenic
TCAGAAAGGTTGCGCCCAAA+TGG 0.459805 4_1:-75456580 Msa0572560:intron
TCAAGTGGGAAACGGAAATT+GGG 0.461042 4_1:+75455776 None:intergenic
TTCTTACTGAGAAGCAGAGT+TGG 0.462952 4_1:+75457100 None:intergenic
ACAATTGCAGAAGTTACTAT+AGG 0.468017 4_1:-75456342 Msa0572560:intron
AGCTGTGACAGTAGCCTTGA+AGG 0.468608 4_1:-75456539 Msa0572560:CDS
GACTCCCATTGGTAGACGCT+GGG 0.469167 4_1:+75456780 None:intergenic
CTCATCAATGAGTTAATTCA+AGG 0.471281 4_1:-75456983 Msa0572560:CDS
ATTTAAAGTGAGCAACTAAC+GGG 0.472889 4_1:+75457279 None:intergenic
CAAATGAAGATGGCTACAAC+TGG 0.475643 4_1:-75456514 Msa0572560:CDS
ATGAATCAGCAATGGTAGCC+AGG 0.481541 4_1:-75455500 Msa0572560:three_prime_UTR
TCAACATGAATGACTTTGAT+GGG 0.485787 4_1:-75455877 Msa0572560:CDS
AATTTCCCTTTCAATACTCC+AGG 0.487060 4_1:-75455734 Msa0572560:CDS
GGGAAACGGAAATTGGGAAT+AGG 0.487728 4_1:+75455782 None:intergenic
TTGAAAATTCAAATGGAATG+TGG 0.488266 4_1:+75457181 None:intergenic
ATATTTGACATAACTTATAG+AGG 0.489229 4_1:-75456250 Msa0572560:CDS
ATGTCATTTCTTCGTTTCCC+AGG 0.491525 4_1:+75456062 None:intergenic
CAACGCAGGAAAACCACAGC+TGG 0.492451 4_1:-75456003 Msa0572560:CDS
GACTGTGAAAACAGATAACC+TGG 0.505158 4_1:-75456080 Msa0572560:CDS
AAGTCATTCATGTTGAAAGA+TGG 0.505789 4_1:+75455884 None:intergenic
AGTTGCTCACTTTAAATACA+AGG 0.507979 4_1:-75457273 Msa0572560:five_prime_UTR
CTCTGAGCGAGGACTTTGAT+GGG 0.512988 4_1:-75456757 Msa0572560:CDS
ATTTGTTACTGATGTATTGG+TGG 0.517341 4_1:+75455808 None:intergenic
GGAAATGATCTCCGTAATGC+CGG 0.517483 4_1:+75455829 None:intergenic
CCTTGGCACAAGGGATTCAC+AGG 0.521370 4_1:-75456912 Msa0572560:CDS
CCGCAACACACAGGACTGCT+GGG 0.524602 4_1:-75456311 Msa0572560:CDS
AAAGGTTGCGCCCAAATGGA+TGG 0.526632 4_1:-75456576 Msa0572560:CDS
CCACTGGATCAAGTGGGAAA+CGG 0.528076 4_1:+75455768 None:intergenic
CTGTGAATCCCTTGTGCCAA+GGG 0.529447 4_1:+75456913 None:intergenic
CACCATATTCCCTTGGCACA+AGG 0.530203 4_1:-75456922 Msa0572560:CDS
GAATCCCCAGCGTCTACCAA+TGG 0.531265 4_1:-75456785 Msa0572560:CDS
CCCAGCAGTCCTGTGTGTTG+CGG 0.534772 4_1:+75456311 None:intergenic
CCGTTTCCCACTTGATCCAG+TGG 0.535887 4_1:-75455768 Msa0572560:CDS
TAAGTTATGTCAAATATTGT+CGG 0.537763 4_1:+75456256 None:intergenic
AGCAAAGATATGAGTGTTGG+AGG 0.537957 4_1:+75457302 None:intergenic
AATCCCCAGCGTCTACCAAT+GGG 0.538110 4_1:-75456784 Msa0572560:CDS
TTTCTTGTGATTGTTGTGCA+TGG 0.548111 4_1:+75456128 None:intergenic
TCTTACAATCCAAACATAAG+TGG 0.549648 4_1:+75455629 None:intergenic
GGACTCCCATTGGTAGACGC+TGG 0.553945 4_1:+75456779 None:intergenic
TGGTTTGTTGGAGTGAGGCT+AGG 0.557529 4_1:+75457201 None:intergenic
GAAGTGGAAGGGAAGGTGAA+AGG 0.559123 4_1:+75456037 None:intergenic
TTGAGGACACCATATTCCCT+TGG 0.560526 4_1:-75456929 Msa0572560:CDS
AAAAGCCTGGAGTATTGAAA+GGG 0.560663 4_1:+75455729 None:intergenic
GGAAAGCATACATGTTCTCA+GGG 0.560758 4_1:-75456229 Msa0572560:CDS
CTGGAAAAGACTGCTCAAGA+AGG 0.564100 4_1:+75455955 None:intergenic
GGGAGCAAAGATATGAGTGT+TGG 0.567449 4_1:+75457299 None:intergenic
CTTGAAGGACCAAATGAAGA+TGG 0.570659 4_1:-75456524 Msa0572560:CDS
CCCATATGAAGTGGAAGGGA+AGG 0.572985 4_1:+75456030 None:intergenic
TCTATTTCCACTGGATCAAG+TGG 0.573162 4_1:+75455761 None:intergenic
CAATGAGTTAATTCAAGGGA+TGG 0.575038 4_1:-75456978 Msa0572560:CDS
TATTTAAAGTGAGCAACTAA+CGG 0.577424 4_1:+75457278 None:intergenic
CTCGCTCAGAGGACTCCCAT+TGG 0.583201 4_1:+75456769 None:intergenic
GTGTACCCATATGAAGTGGA+AGG 0.589053 4_1:+75456025 None:intergenic
GCAGTCCTGTGTGTTGCGGA+AGG 0.591799 4_1:+75456315 None:intergenic
ACCATATTCCCTTGGCACAA+GGG 0.601275 4_1:-75456921 Msa0572560:CDS
AGGCTGGCGGAACCCAGCTG+TGG 0.617131 4_1:+75455990 None:intergenic
GTAGAATAATGAATCAGCAA+TGG 0.617586 4_1:-75455508 Msa0572560:three_prime_UTR
TTATTATTATTATGGATGTG+GGG 0.623210 4_1:+75456160 None:intergenic
TTCATATGGGTACACAACGC+AGG 0.623458 4_1:-75456017 Msa0572560:CDS
GCAAAGATATGAGTGTTGGA+GGG 0.625101 4_1:+75457303 None:intergenic
ATTCAAGCATAATTTACACT+AGG 0.628045 4_1:+75455584 None:intergenic
CCATCAAAGTCCTCGCTCAG+AGG 0.628233 4_1:+75456758 None:intergenic
CCTGTGAATCCCTTGTGCCA+AGG 0.629078 4_1:+75456912 None:intergenic
GAATGTGGTTTGTTGGAGTG+AGG 0.629877 4_1:+75457196 None:intergenic
CGTTGTGTACCCATATGAAG+TGG 0.630275 4_1:+75456021 None:intergenic
TCCTTGGCACCAAACATCCA+AGG 0.635439 4_1:-75456469 Msa0572560:intron
AACGCAGGAAAACCACAGCT+GGG 0.639928 4_1:-75456002 Msa0572560:CDS
CAATGGGAGTCCTCTGAGCG+AGG 0.641184 4_1:-75456768 Msa0572560:CDS
GTAATGCCGGATTCTGAACG+AGG 0.646895 4_1:+75455842 None:intergenic
AGAGATTGAAAGAAGACTTG+AGG 0.648506 4_1:-75456946 Msa0572560:CDS
TGTACCCATATGAAGTGGAA+GGG 0.653842 4_1:+75456026 None:intergenic
TAGTTGCTACAAATTTACAT+TGG 0.655440 4_1:-75455401 Msa0572560:three_prime_UTR
AATGGAGAATGAATGTAACT+GGG 0.656029 4_1:-75457017 Msa0572560:CDS
TCATCAATGAGTTAATTCAA+GGG 0.662966 4_1:-75456982 Msa0572560:CDS
AGGACAACTTCAGAAAGCAA+CGG 0.676142 4_1:-75455535 Msa0572560:three_prime_UTR
CTATTTCCACTGGATCAAGT+GGG 0.677998 4_1:+75455762 None:intergenic
GTGCACCTTCCGCAACACAC+AGG 0.679677 4_1:-75456320 Msa0572560:CDS
ACTCCCATTGGTAGACGCTG+GGG 0.692667 4_1:+75456781 None:intergenic
TAATGCCGGATTCTGAACGA+GGG 0.706809 4_1:+75455843 None:intergenic
ACTGTGAAAACAGATAACCT+GGG 0.720036 4_1:-75456079 Msa0572560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGATTTGAAAATTCAAA+TGG + chr4_1:75455542-75455561 None:intergenic 15.0%
!! TTAAAAACAAATCAAAGAAA+AGG - chr4_1:75456001-75456020 Msa0572560:CDS 15.0%
!! ATTATTATTATTATGGATGT+GGG + chr4_1:75456557-75456576 None:intergenic 15.0%
!! TATTATTATTATTATGGATG+TGG + chr4_1:75456558-75456577 None:intergenic 15.0%
!! AATAGATTTGAAAATTCAAA+TGG + chr4_1:75455542-75455561 None:intergenic 15.0%
!! TTAAAAACAAATCAAAGAAA+AGG - chr4_1:75456001-75456020 Msa0572560:CDS 15.0%
!! ATTATTATTATTATGGATGT+GGG + chr4_1:75456557-75456576 None:intergenic 15.0%
!! TATTATTATTATTATGGATG+TGG + chr4_1:75456558-75456577 None:intergenic 15.0%
!! GTGATATATACAATACAAAA+TGG - chr4_1:75455678-75455697 Msa0572560:three_prime_UTR 20.0%
!!! TTGATTTGTTTTTAACTTCT+TGG + chr4_1:75455996-75456015 None:intergenic 20.0%
!! AAAAAAAATTGTTAGGACAT+AGG + chr4_1:75456100-75456119 None:intergenic 20.0%
!! TTTCAGGAAAAAAAATTGTT+AGG + chr4_1:75456107-75456126 None:intergenic 20.0%
!! TAAGTTATGTCAAATATTGT+CGG + chr4_1:75456460-75456479 None:intergenic 20.0%
!! ATATTTGACATAACTTATAG+AGG - chr4_1:75456463-75456482 Msa0572560:intron 20.0%
!! TTATTATTATTATGGATGTG+GGG + chr4_1:75456556-75456575 None:intergenic 20.0%
!! ATATATTCTCAAGTACAATT+AGG + chr4_1:75457013-75457032 None:intergenic 20.0%
!! TAATTGTACTTGAGAATATA+TGG - chr4_1:75457012-75457031 Msa0572560:CDS 20.0%
!!! ATTTTAAGTCATACTATAAC+AGG - chr4_1:75457158-75457177 Msa0572560:five_prime_UTR 20.0%
!! GTGATATATACAATACAAAA+TGG - chr4_1:75455678-75455697 Msa0572560:three_prime_UTR 20.0%
!!! TTGATTTGTTTTTAACTTCT+TGG + chr4_1:75455996-75456015 None:intergenic 20.0%
!! AAAAAAAATTGTTAGGACAT+AGG + chr4_1:75456100-75456119 None:intergenic 20.0%
!! TTTCAGGAAAAAAAATTGTT+AGG + chr4_1:75456107-75456126 None:intergenic 20.0%
!! TAAGTTATGTCAAATATTGT+CGG + chr4_1:75456460-75456479 None:intergenic 20.0%
!! ATATTTGACATAACTTATAG+AGG - chr4_1:75456463-75456482 Msa0572560:intron 20.0%
!! TTATTATTATTATGGATGTG+GGG + chr4_1:75456556-75456575 None:intergenic 20.0%
!! ATATATTCTCAAGTACAATT+AGG + chr4_1:75457013-75457032 None:intergenic 20.0%
!! TAATTGTACTTGAGAATATA+TGG - chr4_1:75457012-75457031 Msa0572560:CDS 20.0%
!!! ATTTTAAGTCATACTATAAC+AGG - chr4_1:75457158-75457177 Msa0572560:five_prime_UTR 20.0%
!! TATTTAAAGTGAGCAACTAA+CGG + chr4_1:75455438-75455457 None:intergenic 25.0%
! TTGAAAATTCAAATGGAATG+TGG + chr4_1:75455535-75455554 None:intergenic 25.0%
! TCATCAATGAGTTAATTCAA+GGG - chr4_1:75455731-75455750 Msa0572560:CDS 25.0%
! GATACTATCTTCTTATGAAA+AGG - chr4_1:75455831-75455850 Msa0572560:CDS 25.0%
!! CAAAAATTAGTTGATTTCTG+TGG + chr4_1:75456062-75456081 None:intergenic 25.0%
!! CACAGAAATCAACTAATTTT+TGG - chr4_1:75456060-75456079 Msa0572560:CDS 25.0%
!! TGTTTTTCTTGTGACTTATA+TGG + chr4_1:75456526-75456545 None:intergenic 25.0%
!!! AGAATTTGTTACTGATGTAT+TGG + chr4_1:75456911-75456930 None:intergenic 25.0%
!!! GTTGATTTTGTTTATACTCT+GGG + chr4_1:75457042-75457061 None:intergenic 25.0%
!!! AGTTGATTTTGTTTATACTC+TGG + chr4_1:75457043-75457062 None:intergenic 25.0%
!!! CTGAAGTATTTTTTTCACTA+AGG - chr4_1:75457061-75457080 Msa0572560:five_prime_UTR 25.0%
! ATTCAAGCATAATTTACACT+AGG + chr4_1:75457132-75457151 None:intergenic 25.0%
! TAGTTCCAATATTAACTTCA+AGG + chr4_1:75457252-75457271 None:intergenic 25.0%
! TAGTTGCTACAAATTTACAT+TGG - chr4_1:75457312-75457331 Msa0572560:five_prime_UTR 25.0%
!! TATTTAAAGTGAGCAACTAA+CGG + chr4_1:75455438-75455457 None:intergenic 25.0%
! TTGAAAATTCAAATGGAATG+TGG + chr4_1:75455535-75455554 None:intergenic 25.0%
! TCATCAATGAGTTAATTCAA+GGG - chr4_1:75455731-75455750 Msa0572560:CDS 25.0%
! GATACTATCTTCTTATGAAA+AGG - chr4_1:75455831-75455850 Msa0572560:CDS 25.0%
!! CAAAAATTAGTTGATTTCTG+TGG + chr4_1:75456062-75456081 None:intergenic 25.0%
!! CACAGAAATCAACTAATTTT+TGG - chr4_1:75456060-75456079 Msa0572560:CDS 25.0%
!! TGTTTTTCTTGTGACTTATA+TGG + chr4_1:75456526-75456545 None:intergenic 25.0%
!!! AGAATTTGTTACTGATGTAT+TGG + chr4_1:75456911-75456930 None:intergenic 25.0%
!!! GTTGATTTTGTTTATACTCT+GGG + chr4_1:75457042-75457061 None:intergenic 25.0%
!!! AGTTGATTTTGTTTATACTC+TGG + chr4_1:75457043-75457062 None:intergenic 25.0%
!!! CTGAAGTATTTTTTTCACTA+AGG - chr4_1:75457061-75457080 Msa0572560:five_prime_UTR 25.0%
! ATTCAAGCATAATTTACACT+AGG + chr4_1:75457132-75457151 None:intergenic 25.0%
! TAGTTCCAATATTAACTTCA+AGG + chr4_1:75457252-75457271 None:intergenic 25.0%
! TAGTTGCTACAAATTTACAT+TGG - chr4_1:75457312-75457331 Msa0572560:five_prime_UTR 25.0%
!!! GTCTTTTTAGCTGAAAAACT+CGG - chr4_1:75455361-75455380 Msa0572560:three_prime_UTR 30.0%
! ATTTAAAGTGAGCAACTAAC+GGG + chr4_1:75455437-75455456 None:intergenic 30.0%
AGTTGCTCACTTTAAATACA+AGG - chr4_1:75455440-75455459 Msa0572560:three_prime_UTR 30.0%
! AATTTTGTTCTGCTGAATGA+AGG + chr4_1:75455475-75455494 None:intergenic 30.0%
GTTGGATACTGAAGAAATTT+AGG + chr4_1:75455598-75455617 None:intergenic 30.0%
AAATGGAGAATGAATGTAAC+TGG - chr4_1:75455695-75455714 Msa0572560:three_prime_UTR 30.0%
AATGGAGAATGAATGTAACT+GGG - chr4_1:75455696-75455715 Msa0572560:three_prime_UTR 30.0%
CTCATCAATGAGTTAATTCA+AGG - chr4_1:75455730-75455749 Msa0572560:CDS 30.0%
!!! TTTTAACTTCTTGGTGATCT+TGG + chr4_1:75455987-75456006 None:intergenic 30.0%
TATGGTCAAAAAGATATCCT+TGG - chr4_1:75456228-75456247 Msa0572560:CDS 30.0%
ACTTCTGCAATTGTCATAAT+GGG + chr4_1:75456365-75456384 None:intergenic 30.0%
AACTTCTGCAATTGTCATAA+TGG + chr4_1:75456366-75456385 None:intergenic 30.0%
ACAATTGCAGAAGTTACTAT+AGG - chr4_1:75456371-75456390 Msa0572560:intron 30.0%
GATGAGAAATAGTTTGATTC+TGG + chr4_1:75456808-75456827 None:intergenic 30.0%
AAGTCATTCATGTTGAAAGA+TGG + chr4_1:75456832-75456851 None:intergenic 30.0%
TTCAACATGAATGACTTTGA+TGG - chr4_1:75456835-75456854 Msa0572560:CDS 30.0%
TCAACATGAATGACTTTGAT+GGG - chr4_1:75456836-75456855 Msa0572560:CDS 30.0%
! ATTTGTTACTGATGTATTGG+TGG + chr4_1:75456908-75456927 None:intergenic 30.0%
AAATTTGGATCTATTTCCAC+TGG + chr4_1:75456964-75456983 None:intergenic 30.0%
TCTTACAATCCAAACATAAG+TGG + chr4_1:75457087-75457106 None:intergenic 30.0%
GTAGAATAATGAATCAGCAA+TGG - chr4_1:75457205-75457224 Msa0572560:five_prime_UTR 30.0%
AGTGTCCTTGAAGTTAATAT+TGG - chr4_1:75457244-75457263 Msa0572560:five_prime_UTR 30.0%
!!! GTCTTTTTAGCTGAAAAACT+CGG - chr4_1:75455361-75455380 Msa0572560:three_prime_UTR 30.0%
! ATTTAAAGTGAGCAACTAAC+GGG + chr4_1:75455437-75455456 None:intergenic 30.0%
AGTTGCTCACTTTAAATACA+AGG - chr4_1:75455440-75455459 Msa0572560:three_prime_UTR 30.0%
! AATTTTGTTCTGCTGAATGA+AGG + chr4_1:75455475-75455494 None:intergenic 30.0%
GTTGGATACTGAAGAAATTT+AGG + chr4_1:75455598-75455617 None:intergenic 30.0%
AAATGGAGAATGAATGTAAC+TGG - chr4_1:75455695-75455714 Msa0572560:three_prime_UTR 30.0%
AATGGAGAATGAATGTAACT+GGG - chr4_1:75455696-75455715 Msa0572560:three_prime_UTR 30.0%
CTCATCAATGAGTTAATTCA+AGG - chr4_1:75455730-75455749 Msa0572560:CDS 30.0%
!!! TTTTAACTTCTTGGTGATCT+TGG + chr4_1:75455987-75456006 None:intergenic 30.0%
TATGGTCAAAAAGATATCCT+TGG - chr4_1:75456228-75456247 Msa0572560:CDS 30.0%
ACTTCTGCAATTGTCATAAT+GGG + chr4_1:75456365-75456384 None:intergenic 30.0%
AACTTCTGCAATTGTCATAA+TGG + chr4_1:75456366-75456385 None:intergenic 30.0%
ACAATTGCAGAAGTTACTAT+AGG - chr4_1:75456371-75456390 Msa0572560:intron 30.0%
GATGAGAAATAGTTTGATTC+TGG + chr4_1:75456808-75456827 None:intergenic 30.0%
AAGTCATTCATGTTGAAAGA+TGG + chr4_1:75456832-75456851 None:intergenic 30.0%
TTCAACATGAATGACTTTGA+TGG - chr4_1:75456835-75456854 Msa0572560:CDS 30.0%
TCAACATGAATGACTTTGAT+GGG - chr4_1:75456836-75456855 Msa0572560:CDS 30.0%
! ATTTGTTACTGATGTATTGG+TGG + chr4_1:75456908-75456927 None:intergenic 30.0%
AAATTTGGATCTATTTCCAC+TGG + chr4_1:75456964-75456983 None:intergenic 30.0%
TCTTACAATCCAAACATAAG+TGG + chr4_1:75457087-75457106 None:intergenic 30.0%
GTAGAATAATGAATCAGCAA+TGG - chr4_1:75457205-75457224 Msa0572560:five_prime_UTR 30.0%
AGTGTCCTTGAAGTTAATAT+TGG - chr4_1:75457244-75457263 Msa0572560:five_prime_UTR 30.0%
! TCAAATGGAATGTGGTTTGT+TGG + chr4_1:75455527-75455546 None:intergenic 35.0%
GCTTCTCAGTAAGAAACTAT+TGG - chr4_1:75455621-75455640 Msa0572560:three_prime_UTR 35.0%
CAATGAGTTAATTCAAGGGA+TGG - chr4_1:75455735-75455754 Msa0572560:CDS 35.0%
AGAGATTGAAAGAAGACTTG+AGG - chr4_1:75455767-75455786 Msa0572560:CDS 35.0%
TCCAGTAATAACTTCGTTAC+CGG - chr4_1:75455906-75455925 Msa0572560:CDS 35.0%
TCCTGAAATTGCTTTCAGAA+AGG - chr4_1:75456119-75456138 Msa0572560:CDS 35.0%
! ACCTTTCTGAAAGCAATTTC+AGG + chr4_1:75456123-75456142 None:intergenic 35.0%
CTTATCTGATCCATCCATTT+GGG + chr4_1:75456150-75456169 None:intergenic 35.0%
TCTTATCTGATCCATCCATT+TGG + chr4_1:75456151-75456170 None:intergenic 35.0%
TATTAGAATTCCTCTCACCT+TGG + chr4_1:75456264-75456283 None:intergenic 35.0%
AATGAGATGACATCATTCAC+AGG + chr4_1:75456337-75456356 None:intergenic 35.0%
TTGTGACTTATATGGCTCAA+TGG + chr4_1:75456518-75456537 None:intergenic 35.0%
TTTCTTGTGATTGTTGTGCA+TGG + chr4_1:75456588-75456607 None:intergenic 35.0%
! GTTATCTGTTTTCACAGTCA+AGG + chr4_1:75456632-75456651 None:intergenic 35.0%
ACTGTGAAAACAGATAACCT+GGG - chr4_1:75456634-75456653 Msa0572560:intron 35.0%
! CAAGAAGGAATCGTTTTCTA+AGG + chr4_1:75456746-75456765 None:intergenic 35.0%
!! GGAGTATTGAAAGGGAAATT+TGG + chr4_1:75456979-75456998 None:intergenic 35.0%
AATTTCCCTTTCAATACTCC+AGG - chr4_1:75456979-75456998 Msa0572560:CDS 35.0%
!! AAAAGCCTGGAGTATTGAAA+GGG + chr4_1:75456987-75457006 None:intergenic 35.0%
!! AAAAAGCCTGGAGTATTGAA+AGG + chr4_1:75456988-75457007 None:intergenic 35.0%
TACAATTAGGAGAAAAAGCC+TGG + chr4_1:75457000-75457019 None:intergenic 35.0%
! TCAAATGGAATGTGGTTTGT+TGG + chr4_1:75455527-75455546 None:intergenic 35.0%
GCTTCTCAGTAAGAAACTAT+TGG - chr4_1:75455621-75455640 Msa0572560:three_prime_UTR 35.0%
CAATGAGTTAATTCAAGGGA+TGG - chr4_1:75455735-75455754 Msa0572560:CDS 35.0%
AGAGATTGAAAGAAGACTTG+AGG - chr4_1:75455767-75455786 Msa0572560:CDS 35.0%
TCCAGTAATAACTTCGTTAC+CGG - chr4_1:75455906-75455925 Msa0572560:CDS 35.0%
TCCTGAAATTGCTTTCAGAA+AGG - chr4_1:75456119-75456138 Msa0572560:CDS 35.0%
! ACCTTTCTGAAAGCAATTTC+AGG + chr4_1:75456123-75456142 None:intergenic 35.0%
CTTATCTGATCCATCCATTT+GGG + chr4_1:75456150-75456169 None:intergenic 35.0%
TCTTATCTGATCCATCCATT+TGG + chr4_1:75456151-75456170 None:intergenic 35.0%
TATTAGAATTCCTCTCACCT+TGG + chr4_1:75456264-75456283 None:intergenic 35.0%
AATGAGATGACATCATTCAC+AGG + chr4_1:75456337-75456356 None:intergenic 35.0%
TTGTGACTTATATGGCTCAA+TGG + chr4_1:75456518-75456537 None:intergenic 35.0%
TTTCTTGTGATTGTTGTGCA+TGG + chr4_1:75456588-75456607 None:intergenic 35.0%
! GTTATCTGTTTTCACAGTCA+AGG + chr4_1:75456632-75456651 None:intergenic 35.0%
ACTGTGAAAACAGATAACCT+GGG - chr4_1:75456634-75456653 Msa0572560:intron 35.0%
! CAAGAAGGAATCGTTTTCTA+AGG + chr4_1:75456746-75456765 None:intergenic 35.0%
!! GGAGTATTGAAAGGGAAATT+TGG + chr4_1:75456979-75456998 None:intergenic 35.0%
AATTTCCCTTTCAATACTCC+AGG - chr4_1:75456979-75456998 Msa0572560:CDS 35.0%
!! AAAAGCCTGGAGTATTGAAA+GGG + chr4_1:75456987-75457006 None:intergenic 35.0%
!! AAAAAGCCTGGAGTATTGAA+AGG + chr4_1:75456988-75457007 None:intergenic 35.0%
TACAATTAGGAGAAAAAGCC+TGG + chr4_1:75457000-75457019 None:intergenic 35.0%
!! GCAAAGATATGAGTGTTGGA+GGG + chr4_1:75455413-75455432 None:intergenic 40.0%
!! AGCAAAGATATGAGTGTTGG+AGG + chr4_1:75455414-75455433 None:intergenic 40.0%
TTCTTACTGAGAAGCAGAGT+TGG + chr4_1:75455616-75455635 None:intergenic 40.0%
TCCGGTAACGAAGTTATTAC+TGG + chr4_1:75455910-75455929 None:intergenic 40.0%
! AACTTCTTGGTGATCTTGGA+AGG + chr4_1:75455983-75456002 None:intergenic 40.0%
CATCTTCATTTGGTCCTTCA+AGG + chr4_1:75456191-75456210 None:intergenic 40.0%
CTTGAAGGACCAAATGAAGA+TGG - chr4_1:75456189-75456208 Msa0572560:CDS 40.0%
CAGTTGTAGCCATCTTCATT+TGG + chr4_1:75456201-75456220 None:intergenic 40.0%
CAAATGAAGATGGCTACAAC+TGG - chr4_1:75456199-75456218 Msa0572560:CDS 40.0%
GGCTACAACTGGAGAAAATA+TGG - chr4_1:75456210-75456229 Msa0572560:CDS 40.0%
! AGGAAAGCATACATGTTCTC+AGG - chr4_1:75456483-75456502 Msa0572560:CDS 40.0%
! GGAAAGCATACATGTTCTCA+GGG - chr4_1:75456484-75456503 Msa0572560:CDS 40.0%
GACTGTGAAAACAGATAACC+TGG - chr4_1:75456633-75456652 Msa0572560:intron 40.0%
! ATGTCATTTCTTCGTTTCCC+AGG + chr4_1:75456654-75456673 None:intergenic 40.0%
TGTACCCATATGAAGTGGAA+GGG + chr4_1:75456690-75456709 None:intergenic 40.0%
!!! AAGGAATCGTTTTCTAAGGC+TGG + chr4_1:75456742-75456761 None:intergenic 40.0%
CTGGAGATAATAAGTGTGTC+TGG + chr4_1:75456780-75456799 None:intergenic 40.0%
!! TAGTTTGATTCTGGTGTTGC+TGG + chr4_1:75456799-75456818 None:intergenic 40.0%
TCAAGTGGGAAACGGAAATT+GGG + chr4_1:75456940-75456959 None:intergenic 40.0%
ATCAAGTGGGAAACGGAAAT+TGG + chr4_1:75456941-75456960 None:intergenic 40.0%
CTATTTCCACTGGATCAAGT+GGG + chr4_1:75456954-75456973 None:intergenic 40.0%
TCTATTTCCACTGGATCAAG+TGG + chr4_1:75456955-75456974 None:intergenic 40.0%
TCACTAAGGCCACTTATGTT+TGG - chr4_1:75457075-75457094 Msa0572560:five_prime_UTR 40.0%
AGGACAACTTCAGAAAGCAA+CGG - chr4_1:75457178-75457197 Msa0572560:five_prime_UTR 40.0%
CAAGGACACTTGTAAATTCC+TGG + chr4_1:75457234-75457253 None:intergenic 40.0%
!! GCAAAGATATGAGTGTTGGA+GGG + chr4_1:75455413-75455432 None:intergenic 40.0%
!! AGCAAAGATATGAGTGTTGG+AGG + chr4_1:75455414-75455433 None:intergenic 40.0%
TTCTTACTGAGAAGCAGAGT+TGG + chr4_1:75455616-75455635 None:intergenic 40.0%
TCCGGTAACGAAGTTATTAC+TGG + chr4_1:75455910-75455929 None:intergenic 40.0%
! AACTTCTTGGTGATCTTGGA+AGG + chr4_1:75455983-75456002 None:intergenic 40.0%
CATCTTCATTTGGTCCTTCA+AGG + chr4_1:75456191-75456210 None:intergenic 40.0%
CTTGAAGGACCAAATGAAGA+TGG - chr4_1:75456189-75456208 Msa0572560:CDS 40.0%
CAGTTGTAGCCATCTTCATT+TGG + chr4_1:75456201-75456220 None:intergenic 40.0%
CAAATGAAGATGGCTACAAC+TGG - chr4_1:75456199-75456218 Msa0572560:CDS 40.0%
GGCTACAACTGGAGAAAATA+TGG - chr4_1:75456210-75456229 Msa0572560:CDS 40.0%
! AGGAAAGCATACATGTTCTC+AGG - chr4_1:75456483-75456502 Msa0572560:CDS 40.0%
! GGAAAGCATACATGTTCTCA+GGG - chr4_1:75456484-75456503 Msa0572560:CDS 40.0%
GACTGTGAAAACAGATAACC+TGG - chr4_1:75456633-75456652 Msa0572560:intron 40.0%
! ATGTCATTTCTTCGTTTCCC+AGG + chr4_1:75456654-75456673 None:intergenic 40.0%
TGTACCCATATGAAGTGGAA+GGG + chr4_1:75456690-75456709 None:intergenic 40.0%
!!! AAGGAATCGTTTTCTAAGGC+TGG + chr4_1:75456742-75456761 None:intergenic 40.0%
CTGGAGATAATAAGTGTGTC+TGG + chr4_1:75456780-75456799 None:intergenic 40.0%
!! TAGTTTGATTCTGGTGTTGC+TGG + chr4_1:75456799-75456818 None:intergenic 40.0%
TCAAGTGGGAAACGGAAATT+GGG + chr4_1:75456940-75456959 None:intergenic 40.0%
ATCAAGTGGGAAACGGAAAT+TGG + chr4_1:75456941-75456960 None:intergenic 40.0%
CTATTTCCACTGGATCAAGT+GGG + chr4_1:75456954-75456973 None:intergenic 40.0%
TCTATTTCCACTGGATCAAG+TGG + chr4_1:75456955-75456974 None:intergenic 40.0%
TCACTAAGGCCACTTATGTT+TGG - chr4_1:75457075-75457094 Msa0572560:five_prime_UTR 40.0%
AGGACAACTTCAGAAAGCAA+CGG - chr4_1:75457178-75457197 Msa0572560:five_prime_UTR 40.0%
CAAGGACACTTGTAAATTCC+TGG + chr4_1:75457234-75457253 None:intergenic 40.0%
GGGAGCAAAGATATGAGTGT+TGG + chr4_1:75455417-75455436 None:intergenic 45.0%
!! GAATGTGGTTTGTTGGAGTG+AGG + chr4_1:75455520-75455539 None:intergenic 45.0%
TTGAGGACACCATATTCCCT+TGG - chr4_1:75455784-75455803 Msa0572560:CDS 45.0%
ACCATATTCCCTTGGCACAA+GGG - chr4_1:75455792-75455811 Msa0572560:CDS 45.0%
TTCCTCTCACCTTGGATGTT+TGG + chr4_1:75456256-75456275 None:intergenic 45.0%
ACCTTCCCTTCCACTTCATA+TGG - chr4_1:75456682-75456701 Msa0572560:intron 45.0%
CCTTCCCTTCCACTTCATAT+GGG - chr4_1:75456683-75456702 Msa0572560:intron 45.0%
GTGTACCCATATGAAGTGGA+AGG + chr4_1:75456691-75456710 None:intergenic 45.0%
CGTTGTGTACCCATATGAAG+TGG + chr4_1:75456695-75456714 None:intergenic 45.0%
TTCATATGGGTACACAACGC+AGG - chr4_1:75456696-75456715 Msa0572560:intron 45.0%
!!! GAATCGTTTTCTAAGGCTGG+CGG + chr4_1:75456739-75456758 None:intergenic 45.0%
CTGGAAAAGACTGCTCAAGA+AGG + chr4_1:75456761-75456780 None:intergenic 45.0%
AACAACCCTCGTTCAGAATC+CGG - chr4_1:75456865-75456884 Msa0572560:CDS 45.0%
TAATGCCGGATTCTGAACGA+GGG + chr4_1:75456873-75456892 None:intergenic 45.0%
TCGTTCAGAATCCGGCATTA+CGG - chr4_1:75456873-75456892 Msa0572560:CDS 45.0%
GGAAATGATCTCCGTAATGC+CGG + chr4_1:75456887-75456906 None:intergenic 45.0%
GGGAAACGGAAATTGGGAAT+AGG + chr4_1:75456934-75456953 None:intergenic 45.0%
ATGAATCAGCAATGGTAGCC+AGG - chr4_1:75457213-75457232 Msa0572560:five_prime_UTR 45.0%
GGGAGCAAAGATATGAGTGT+TGG + chr4_1:75455417-75455436 None:intergenic 45.0%
!! GAATGTGGTTTGTTGGAGTG+AGG + chr4_1:75455520-75455539 None:intergenic 45.0%
TTGAGGACACCATATTCCCT+TGG - chr4_1:75455784-75455803 Msa0572560:CDS 45.0%
ACCATATTCCCTTGGCACAA+GGG - chr4_1:75455792-75455811 Msa0572560:CDS 45.0%
TTCCTCTCACCTTGGATGTT+TGG + chr4_1:75456256-75456275 None:intergenic 45.0%
ACCTTCCCTTCCACTTCATA+TGG - chr4_1:75456682-75456701 Msa0572560:intron 45.0%
CCTTCCCTTCCACTTCATAT+GGG - chr4_1:75456683-75456702 Msa0572560:intron 45.0%
GTGTACCCATATGAAGTGGA+AGG + chr4_1:75456691-75456710 None:intergenic 45.0%
CGTTGTGTACCCATATGAAG+TGG + chr4_1:75456695-75456714 None:intergenic 45.0%
TTCATATGGGTACACAACGC+AGG - chr4_1:75456696-75456715 Msa0572560:intron 45.0%
!!! GAATCGTTTTCTAAGGCTGG+CGG + chr4_1:75456739-75456758 None:intergenic 45.0%
CTGGAAAAGACTGCTCAAGA+AGG + chr4_1:75456761-75456780 None:intergenic 45.0%
AACAACCCTCGTTCAGAATC+CGG - chr4_1:75456865-75456884 Msa0572560:CDS 45.0%
TAATGCCGGATTCTGAACGA+GGG + chr4_1:75456873-75456892 None:intergenic 45.0%
TCGTTCAGAATCCGGCATTA+CGG - chr4_1:75456873-75456892 Msa0572560:CDS 45.0%
GGAAATGATCTCCGTAATGC+CGG + chr4_1:75456887-75456906 None:intergenic 45.0%
GGGAAACGGAAATTGGGAAT+AGG + chr4_1:75456934-75456953 None:intergenic 45.0%
ATGAATCAGCAATGGTAGCC+AGG - chr4_1:75457213-75457232 Msa0572560:five_prime_UTR 45.0%
!! GAATAATATTATTATTATTA+TGG + chr4_1:75456564-75456583 None:intergenic 5.0%
!! GAATAATATTATTATTATTA+TGG + chr4_1:75456564-75456583 None:intergenic 5.0%
!! TGGTTTGTTGGAGTGAGGCT+AGG + chr4_1:75455515-75455534 None:intergenic 50.0%
CACCATATTCCCTTGGCACA+AGG - chr4_1:75455791-75455810 Msa0572560:CDS 50.0%
TCCCTTGTGCCAAGGGAATA+TGG + chr4_1:75455796-75455815 None:intergenic 50.0%
CTGTGAATCCCTTGTGCCAA+GGG + chr4_1:75455803-75455822 None:intergenic 50.0%
AATCCCCAGCGTCTACCAAT+GGG - chr4_1:75455929-75455948 Msa0572560:CDS 50.0%
CTCTGAGCGAGGACTTTGAT+GGG - chr4_1:75455956-75455975 Msa0572560:CDS 50.0%
TCAGAAAGGTTGCGCCCAAA+TGG - chr4_1:75456133-75456152 Msa0572560:CDS 50.0%
AAAGGTTGCGCCCAAATGGA+TGG - chr4_1:75456137-75456156 Msa0572560:CDS 50.0%
! AGCTGTGACAGTAGCCTTGA+AGG - chr4_1:75456174-75456193 Msa0572560:CDS 50.0%
TCCTTGGCACCAAACATCCA+AGG - chr4_1:75456244-75456263 Msa0572560:CDS 50.0%
!! ACCTTGGATGTTTGGTGCCA+AGG + chr4_1:75456248-75456267 None:intergenic 50.0%
CACCAAACATCCAAGGTGAG+AGG - chr4_1:75456251-75456270 Msa0572560:CDS 50.0%
GAAGTGGAAGGGAAGGTGAA+AGG + chr4_1:75456679-75456698 None:intergenic 50.0%
CCCATATGAAGTGGAAGGGA+AGG + chr4_1:75456686-75456705 None:intergenic 50.0%
AACGCAGGAAAACCACAGCT+GGG - chr4_1:75456711-75456730 Msa0572560:intron 50.0%
GTAATGCCGGATTCTGAACG+AGG + chr4_1:75456874-75456893 None:intergenic 50.0%
CCACTGGATCAAGTGGGAAA+CGG + chr4_1:75456948-75456967 None:intergenic 50.0%
!! TGGTTTGTTGGAGTGAGGCT+AGG + chr4_1:75455515-75455534 None:intergenic 50.0%
CACCATATTCCCTTGGCACA+AGG - chr4_1:75455791-75455810 Msa0572560:CDS 50.0%
TCCCTTGTGCCAAGGGAATA+TGG + chr4_1:75455796-75455815 None:intergenic 50.0%
CTGTGAATCCCTTGTGCCAA+GGG + chr4_1:75455803-75455822 None:intergenic 50.0%
AATCCCCAGCGTCTACCAAT+GGG - chr4_1:75455929-75455948 Msa0572560:CDS 50.0%
CTCTGAGCGAGGACTTTGAT+GGG - chr4_1:75455956-75455975 Msa0572560:CDS 50.0%
TCAGAAAGGTTGCGCCCAAA+TGG - chr4_1:75456133-75456152 Msa0572560:CDS 50.0%
AAAGGTTGCGCCCAAATGGA+TGG - chr4_1:75456137-75456156 Msa0572560:CDS 50.0%
! AGCTGTGACAGTAGCCTTGA+AGG - chr4_1:75456174-75456193 Msa0572560:CDS 50.0%
TCCTTGGCACCAAACATCCA+AGG - chr4_1:75456244-75456263 Msa0572560:CDS 50.0%
!! ACCTTGGATGTTTGGTGCCA+AGG + chr4_1:75456248-75456267 None:intergenic 50.0%
CACCAAACATCCAAGGTGAG+AGG - chr4_1:75456251-75456270 Msa0572560:CDS 50.0%
GAAGTGGAAGGGAAGGTGAA+AGG + chr4_1:75456679-75456698 None:intergenic 50.0%
CCCATATGAAGTGGAAGGGA+AGG + chr4_1:75456686-75456705 None:intergenic 50.0%
AACGCAGGAAAACCACAGCT+GGG - chr4_1:75456711-75456730 Msa0572560:intron 50.0%
GTAATGCCGGATTCTGAACG+AGG + chr4_1:75456874-75456893 None:intergenic 50.0%
CCACTGGATCAAGTGGGAAA+CGG + chr4_1:75456948-75456967 None:intergenic 50.0%
CCTGTGAATCCCTTGTGCCA+AGG + chr4_1:75455804-75455823 None:intergenic 55.0%
CCTTGGCACAAGGGATTCAC+AGG - chr4_1:75455801-75455820 Msa0572560:CDS 55.0%
TTGGTAGACGCTGGGGATTC+CGG + chr4_1:75455928-75455947 None:intergenic 55.0%
GAATCCCCAGCGTCTACCAA+TGG - chr4_1:75455928-75455947 Msa0572560:CDS 55.0%
ACTCCCATTGGTAGACGCTG+GGG + chr4_1:75455935-75455954 None:intergenic 55.0%
GACTCCCATTGGTAGACGCT+GGG + chr4_1:75455936-75455955 None:intergenic 55.0%
CCATCAAAGTCCTCGCTCAG+AGG + chr4_1:75455958-75455977 None:intergenic 55.0%
CCTCTGAGCGAGGACTTTGA+TGG - chr4_1:75455955-75455974 Msa0572560:CDS 55.0%
CAACGCAGGAAAACCACAGC+TGG - chr4_1:75456710-75456729 Msa0572560:intron 55.0%
CCGTTTCCCACTTGATCCAG+TGG - chr4_1:75456945-75456964 Msa0572560:CDS 55.0%
CCTGTGAATCCCTTGTGCCA+AGG + chr4_1:75455804-75455823 None:intergenic 55.0%
CCTTGGCACAAGGGATTCAC+AGG - chr4_1:75455801-75455820 Msa0572560:CDS 55.0%
TTGGTAGACGCTGGGGATTC+CGG + chr4_1:75455928-75455947 None:intergenic 55.0%
GAATCCCCAGCGTCTACCAA+TGG - chr4_1:75455928-75455947 Msa0572560:CDS 55.0%
ACTCCCATTGGTAGACGCTG+GGG + chr4_1:75455935-75455954 None:intergenic 55.0%
GACTCCCATTGGTAGACGCT+GGG + chr4_1:75455936-75455955 None:intergenic 55.0%
CCATCAAAGTCCTCGCTCAG+AGG + chr4_1:75455958-75455977 None:intergenic 55.0%
CCTCTGAGCGAGGACTTTGA+TGG - chr4_1:75455955-75455974 Msa0572560:CDS 55.0%
CAACGCAGGAAAACCACAGC+TGG - chr4_1:75456710-75456729 Msa0572560:intron 55.0%
CCGTTTCCCACTTGATCCAG+TGG - chr4_1:75456945-75456964 Msa0572560:CDS 55.0%
GGACTCCCATTGGTAGACGC+TGG + chr4_1:75455937-75455956 None:intergenic 60.0%
CTCGCTCAGAGGACTCCCAT+TGG + chr4_1:75455947-75455966 None:intergenic 60.0%
CAATGGGAGTCCTCTGAGCG+AGG - chr4_1:75455945-75455964 Msa0572560:CDS 60.0%
GTGCACCTTCCGCAACACAC+AGG - chr4_1:75456393-75456412 Msa0572560:intron 60.0%
GCAGTCCTGTGTGTTGCGGA+AGG + chr4_1:75456401-75456420 None:intergenic 60.0%
TCCGCAACACACAGGACTGC+TGG - chr4_1:75456401-75456420 Msa0572560:intron 60.0%
CCCAGCAGTCCTGTGTGTTG+CGG + chr4_1:75456405-75456424 None:intergenic 60.0%
CCGCAACACACAGGACTGCT+GGG - chr4_1:75456402-75456421 Msa0572560:intron 60.0%
GGACTCCCATTGGTAGACGC+TGG + chr4_1:75455937-75455956 None:intergenic 60.0%
CTCGCTCAGAGGACTCCCAT+TGG + chr4_1:75455947-75455966 None:intergenic 60.0%
CAATGGGAGTCCTCTGAGCG+AGG - chr4_1:75455945-75455964 Msa0572560:CDS 60.0%
GTGCACCTTCCGCAACACAC+AGG - chr4_1:75456393-75456412 Msa0572560:intron 60.0%
GCAGTCCTGTGTGTTGCGGA+AGG + chr4_1:75456401-75456420 None:intergenic 60.0%
TCCGCAACACACAGGACTGC+TGG - chr4_1:75456401-75456420 Msa0572560:intron 60.0%
CCCAGCAGTCCTGTGTGTTG+CGG + chr4_1:75456405-75456424 None:intergenic 60.0%
CCGCAACACACAGGACTGCT+GGG - chr4_1:75456402-75456421 Msa0572560:intron 60.0%
AGGCTGGCGGAACCCAGCTG+TGG + chr4_1:75456726-75456745 None:intergenic 70.0%
AGGCTGGCGGAACCCAGCTG+TGG + chr4_1:75456726-75456745 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 75455354 75457381 75455354 ID=Msa0572560;Name=Msa0572560
chr4_1 mRNA 75455354 75457381 75455354 ID=Msa0572560-mRNA-1;Parent=Msa0572560;Name=Msa0572560-mRNA-1;_AED=0.03;_eAED=0.03;_QI=343|1|1|1|1|1|3|367|362
chr4_1 exon 75455354 75456354 75455354 ID=Msa0572560-mRNA-1:exon:26140;Parent=Msa0572560-mRNA-1
chr4_1 exon 75456470 75456598 75456470 ID=Msa0572560-mRNA-1:exon:26139;Parent=Msa0572560-mRNA-1
chr4_1 exon 75456713 75457381 75456713 ID=Msa0572560-mRNA-1:exon:26138;Parent=Msa0572560-mRNA-1
chr4_1 five_prime_UTR 75457039 75457381 75457039 ID=Msa0572560-mRNA-1:five_prime_utr;Parent=Msa0572560-mRNA-1
chr4_1 CDS 75456713 75457038 75456713 ID=Msa0572560-mRNA-1:cds;Parent=Msa0572560-mRNA-1
chr4_1 CDS 75456470 75456598 75456470 ID=Msa0572560-mRNA-1:cds;Parent=Msa0572560-mRNA-1
chr4_1 CDS 75455721 75456354 75455721 ID=Msa0572560-mRNA-1:cds;Parent=Msa0572560-mRNA-1
chr4_1 three_prime_UTR 75455354 75455720 75455354 ID=Msa0572560-mRNA-1:three_prime_utr;Parent=Msa0572560-mRNA-1
Gene Sequence

>Msa0572560

ATGGAGAATGAATGTAACTGGGAGCAAAACACACTCATCAATGAGTTAATTCAAGGGATGGATGTAGCAAAGAGATTGAAAGAAGACTTGAGGACACCATATTCCCTTGGCACAAGGGATTCACAGGTGCAGATGATACTATCTTCTTATGAAAAGGCTTTACAAATTTTAAGATGTAATGAATCAACTTCTAAGTCACAGACAGTGACTCCAGTAATAACTTCGTTACCGGAATCCCCAGCGTCTACCAATGGGAGTCCTCTGAGCGAGGACTTTGATGGGACCTTCCAAGATCACCAAGAAGTTAAAAACAAATCAAAGAAAAGAAAGGTTGCGCCCAAATGGATGGATCAGATAAGAGTGAGCTGTGACAGTAGCCTTGAAGGACCAAATGAAGATGGCTACAACTGGAGAAAATATGGTCAAAAAGATATCCTTGGCACCAAACATCCAAGAAGTTACTATAGGTGCACCTTCCGCAACACACAGGACTGCTGGGCGACGAAGCAAGTGCAGAGATCAGATGAAGATCCGACAATATTTGACATAACTTATAGAGGAAAGCATACATGTTCTCAGGGAAACAATGCCATTGAGCCATATAAGTCACAAGAAAAACAAGAGAAACCCCACATCCATAATAATAATAATATTATTCACCATGCACAACAATCACAAGAAAGCTTTACAAATTTCAGCAACACCTTGACTGTGAAAACAGATAACCTGGGAAACGAAGAAATGACATGTCCTTTCACCTTCCCTTCCACTTCATATGGGTACACAACGCAGGAAAACCACAGCTGGGTTCCGCCAGCCTTAGAAAACGATTCCTTCTTGAGCAGTCTTTTCCAGACACACTTATTATCTCCAGCAACACCAGAATCAAACTATTTCTCATCTCCATCTTTCAACATGAATGACTTTGATGGGTTCTATAACAACCCTCGTTCAGAATCCGGCATTACGGAGATCATTTCCACCAATACATCAGTAACAAATTCTCCTATTCCCAATTTCCGTTTCCCACTTGATCCAGTGGAAATAGATCCAAATTTCCCTTTCAATACTCCAGGCTTTTTCTCCTAA
Protein sequence

>Msa0572560

MENECNWEQNTLINELIQGMDVAKRLKEDLRTPYSLGTRDSQVQMILSSYEKALQILRCNESTSKSQTVTPVITSLPESPASTNGSPLSEDFDGTFQDHQEVKNKSKKRKVAPKWMDQIRVSCDSSLEGPNEDGYNWRKYGQKDILGTKHPRSYYRCTFRNTQDCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNAIEPYKSQEKQEKPHIHNNNNIIHHAQQSQESFTNFSNTLTVKTDNLGNEEMTCPFTFPSTSYGYTTQENHSWVPPALENDSFLSSLFQTHLLSPATPESNYFSSPSFNMNDFDGFYNNPRSESGITEIISTNTSVTNSPIPNFRFPLDPVEIDPNFPFNTPGFFS*