Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545550 | XP_013455821.1 | 98.792 | 745 | 9 | 0 | 1 | 745 | 1 | 745 | 0.0 | 1517 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545550 | sp|Q1E6U9|SEC24_COCIM | 22.349 | 613 | 371 | 21 | 3 | 585 | 206 | 743 | 6.97e-22 | 105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545550 | A0A072UJN9 | 98.792 | 745 | 9 | 0 | 1 | 745 | 1 | 745 | 0.0 | 1517 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0169960 | Msa0545550 | -0.804757 | 1.853180e-49 | -8.615850e-47 |
| Msa0545550 | Msa0656060 | 0.916585 | 1.492401e-85 | -8.615850e-47 |
| Msa0545550 | Msa0812330 | 0.822497 | 2.294978e-53 | -8.615850e-47 |
| Msa0545550 | Msa0899500 | 0.808345 | 3.242360e-50 | -8.615850e-47 |
| Msa0545550 | Msa0999270 | 0.803904 | 2.790361e-49 | -8.615850e-47 |
| Msa0545550 | Msa1360380 | -0.800938 | 1.139346e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545550 | MtrunA17_Chr4g0026291 | 98.792 | 745 | 9 | 0 | 1 | 745 | 1 | 745 | 0.0 | 1517 |
| Msa0545550 | MtrunA17_Chr7g0271481 | 22.798 | 579 | 354 | 22 | 3 | 554 | 303 | 815 | 3.29e-21 | 99.4 |
| Msa0545550 | MtrunA17_Chr1g0210851 | 23.543 | 429 | 260 | 14 | 3 | 401 | 396 | 786 | 9.14e-16 | 82.0 |
| Msa0545550 | MtrunA17_Chr8g0338351 | 22.205 | 662 | 413 | 25 | 52 | 663 | 57 | 666 | 1.26e-14 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545550 | AT2G27460.1 | 78.743 | 748 | 153 | 4 | 1 | 745 | 1 | 745 | 0.0 | 1204 |
| Msa0545550 | AT3G07100.1 | 22.688 | 573 | 362 | 20 | 3 | 554 | 321 | 833 | 9.98e-23 | 104 |
| Msa0545550 | AT2G21630.1 | 22.633 | 676 | 410 | 26 | 45 | 663 | 48 | 667 | 6.42e-14 | 76.3 |
| Msa0545550 | AT4G32640.2 | 22.685 | 432 | 260 | 15 | 3 | 401 | 379 | 769 | 6.44e-13 | 73.2 |
| Msa0545550 | AT4G32640.1 | 22.685 | 432 | 260 | 15 | 3 | 401 | 379 | 769 | 6.44e-13 | 73.2 |
Find 206 sgRNAs with CRISPR-Local
Find 599 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCCTTTGTTACAGTTTC+TGG | 0.014004 | 4_1:+35946143 | Msa0545550:CDS |
| CTGCTAGGTGGGCGCGGTTT+TGG | 0.122740 | 4_1:+35946390 | Msa0545550:CDS |
| TGCAGCTTCCGAGGAGTTTC+TGG | 0.146240 | 4_1:+35945860 | Msa0545550:intron |
| GCGAAGTTTCCGGCCTATTA+TGG | 0.174915 | 4_1:+35943874 | Msa0545550:CDS |
| CCTCAGGAGCTTTCCAATTC+AGG | 0.199227 | 4_1:+35949053 | Msa0545550:CDS |
| TTGTCTGGTCCTCCTGATTA+TGG | 0.212008 | 4_1:+35946606 | Msa0545550:CDS |
| CATCATACAGTCCTAGTTTA+TGG | 0.225820 | 4_1:-35946044 | None:intergenic |
| AGGAAATAATACGTACATTA+AGG | 0.225850 | 4_1:+35952157 | Msa0545550:three_prime_UTR |
| CATAAAATAGAGATCCCTTT+TGG | 0.233074 | 4_1:+35952102 | Msa0545550:exon |
| AATACCAGATCTTTATAAAA+TGG | 0.254969 | 4_1:-35946717 | None:intergenic |
| GCAGGTTATACTTGCCTCTT+TGG | 0.256095 | 4_1:+35950889 | Msa0545550:intron |
| AGTTATCTTGGATCTGAATA+TGG | 0.260857 | 4_1:+35946435 | Msa0545550:CDS |
| AATTAGTGGGAAAATGATAT+TGG | 0.261162 | 4_1:+35952467 | Msa0545550:three_prime_UTR |
| TCTATCTTCAATGTCTGTTT+AGG | 0.309830 | 4_1:+35951149 | Msa0545550:CDS |
| TACCCCGGTGCGAGAATTGC+TGG | 0.312735 | 4_1:+35943973 | Msa0545550:CDS |
| ATTTACAGATACAGGAAAAT+AGG | 0.337945 | 4_1:+35952137 | Msa0545550:three_prime_UTR |
| AAATCCTTCCTCTCACAAAA+TGG | 0.338303 | 4_1:-35952186 | None:intergenic |
| AATGCACTTACCGAATTTCC+AGG | 0.350578 | 4_1:-35947888 | None:intergenic |
| AACCCTTTCTTCTGTATGTA+TGG | 0.352187 | 4_1:+35952352 | Msa0545550:three_prime_UTR |
| AAGTGCATTGCTGGCAGCTT+TGG | 0.354532 | 4_1:+35945893 | Msa0545550:CDS |
| TGTAGAGACCCCTCCTGAAT+TGG | 0.364665 | 4_1:-35949066 | None:intergenic |
| CGAAGTTTCCGGCCTATTAT+GGG | 0.366168 | 4_1:+35943875 | Msa0545550:CDS |
| AGAGTCTTTGCATTCTTGTC+TGG | 0.368134 | 4_1:+35946591 | Msa0545550:CDS |
| GAATCTCTCTGTAGTTATCT+TGG | 0.372662 | 4_1:+35946423 | Msa0545550:CDS |
| TGAATTTAAGCCTGGAAATT+CGG | 0.375282 | 4_1:+35947878 | Msa0545550:CDS |
| CGAGGATATGCTTGTTTGTC+TGG | 0.380876 | 4_1:-35951643 | None:intergenic |
| ATTCCTTGTCAGGTTTGTTA+AGG | 0.382445 | 4_1:+35951888 | Msa0545550:intron |
| CTTTCACAGTTATATCTTCA+AGG | 0.382548 | 4_1:-35952069 | None:intergenic |
| TTATAAAATGGTGTCTGCTC+CGG | 0.383227 | 4_1:-35946705 | None:intergenic |
| CGACGGTTACTCCCCATAAT+AGG | 0.386917 | 4_1:-35943887 | None:intergenic |
| AACAAATGAGTACACTGATT+TGG | 0.387569 | 4_1:+35946856 | Msa0545550:CDS |
| CAATTGGACACAAGGCGATA+TGG | 0.393583 | 4_1:+35946636 | Msa0545550:CDS |
| ATCTTCAAGCTCAGTTGATA+AGG | 0.394715 | 4_1:-35946118 | None:intergenic |
| CAATGTCAATTTACAGATAC+AGG | 0.396454 | 4_1:+35952129 | Msa0545550:three_prime_UTR |
| ACTCACTAAAAGTGCATTGC+TGG | 0.397610 | 4_1:+35945884 | Msa0545550:CDS |
| TGAAGATAGATGCGATAATC+AGG | 0.399902 | 4_1:-35951136 | None:intergenic |
| TAACATCAGTCATCAAAATC+TGG | 0.400923 | 4_1:-35952434 | None:intergenic |
| ATTGAAGGTGGACACTTGTA+AGG | 0.401391 | 4_1:+35946281 | Msa0545550:intron |
| GTTAATCCTATGTCAATTAG+TGG | 0.401397 | 4_1:+35952453 | Msa0545550:three_prime_UTR |
| ATTGAAGAGCAGGACGTTGA+TGG | 0.402336 | 4_1:+35952010 | Msa0545550:CDS |
| AATTGTCCAGCTCCATAATC+AGG | 0.403716 | 4_1:-35946618 | None:intergenic |
| GAGTTAGACTCAGCTTGTTC+CGG | 0.410599 | 4_1:-35943735 | None:intergenic |
| GGAAATAATACGTACATTAA+GGG | 0.417211 | 4_1:+35952158 | Msa0545550:three_prime_UTR |
| CACTTAGACCAACAACTTCA+TGG | 0.419630 | 4_1:+35946328 | Msa0545550:CDS |
| ATTAGTGGGAAAATGATATT+GGG | 0.426701 | 4_1:+35952468 | Msa0545550:three_prime_UTR |
| AATTGACATTGCACCCCAAA+AGG | 0.428351 | 4_1:-35952117 | None:intergenic |
| ACCGACGCACGCGAAGTTTC+CGG | 0.428829 | 4_1:+35943864 | Msa0545550:CDS |
| CAATCGTGGGGTGGCGGAAA+AGG | 0.430902 | 4_1:-35951775 | None:intergenic |
| TCAACCGCCGCAACATAAAC+AGG | 0.436105 | 4_1:-35944286 | None:intergenic |
| AGCAAAGATAGAACAACTTC+CGG | 0.436514 | 4_1:-35950597 | None:intergenic |
| CTTCTTCGCTTTCACGAAGA+AGG | 0.436841 | 4_1:+35951106 | Msa0545550:CDS |
| TGATTATGGAGCTGGACAAT+TGG | 0.438986 | 4_1:+35946620 | Msa0545550:CDS |
| GTGAGCAATATGCCAGCAAA+AGG | 0.441160 | 4_1:+35946658 | Msa0545550:CDS |
| CGTGGGGTTGTTCTCTCTGC+GGG | 0.448610 | 4_1:+35944033 | Msa0545550:CDS |
| ACCTCAACTGAATTTAAGCC+TGG | 0.449301 | 4_1:+35947870 | Msa0545550:CDS |
| ACATTGACTAGCACTTCAAA+AGG | 0.453012 | 4_1:-35952291 | None:intergenic |
| CTGAGTACTGAAATGCAATC+TGG | 0.454685 | 4_1:-35949019 | None:intergenic |
| TATAAAATGGTGTCTGCTCC+GGG | 0.457228 | 4_1:-35946704 | None:intergenic |
| GGTCCTCCTGATTATGGAGC+TGG | 0.463244 | 4_1:+35946612 | Msa0545550:CDS |
| TCGCGTGCGTCGGTGTCCGA+TGG | 0.466717 | 4_1:-35943855 | None:intergenic |
| AGGATCCGAACAGTGCAGTT+TGG | 0.466995 | 4_1:+35950534 | Msa0545550:CDS |
| GTTCTCTCCCATGAAGTTGT+TGG | 0.470722 | 4_1:-35946336 | None:intergenic |
| GTGGCATATGATGTCAATAC+TGG | 0.472175 | 4_1:-35951619 | None:intergenic |
| ATCAGTGTACTCATTTGTTA+CGG | 0.472469 | 4_1:-35946852 | None:intergenic |
| AAAGTACAACAAAGGGGAGG+GGG | 0.473481 | 4_1:-35952249 | None:intergenic |
| GAACTTTCTGATTGAAGAGC+AGG | 0.474751 | 4_1:+35952000 | Msa0545550:CDS |
| CGTCGGTGTCCGATGGGAAG+CGG | 0.476085 | 4_1:-35943848 | None:intergenic |
| CACAGTTATATCTTCAAGGA+AGG | 0.476371 | 4_1:-35952065 | None:intergenic |
| ACTTTACGACAGCTGTGATC+CGG | 0.476490 | 4_1:+35950578 | Msa0545550:CDS |
| CATTGACTAGCACTTCAAAA+GGG | 0.478531 | 4_1:-35952290 | None:intergenic |
| CGCGGTAGCGGCTGCAGTTG+AGG | 0.479669 | 4_1:-35951055 | None:intergenic |
| CTCAGTTGTAGTTCCTCCTC+AGG | 0.483102 | 4_1:+35949037 | Msa0545550:CDS |
| CTCCATACATACAGAAGAAA+GGG | 0.483418 | 4_1:-35952354 | None:intergenic |
| CGCCCAGCAATTCTCGCACC+GGG | 0.486301 | 4_1:-35943976 | None:intergenic |
| TCCATTCCTTGACCTGCTCC+CGG | 0.486366 | 4_1:-35946360 | None:intergenic |
| ATTCCCTTCAGCGGCGGCTA+AGG | 0.486561 | 4_1:+35950514 | Msa0545550:CDS |
| TGGATCCGTATGCCGGTGAT+TGG | 0.491521 | 4_1:-35943938 | None:intergenic |
| CCGGGGTAAAAGCTCGCCGC+TGG | 0.492821 | 4_1:-35943958 | None:intergenic |
| ACCCCGGTGCGAGAATTGCT+GGG | 0.492939 | 4_1:+35943974 | Msa0545550:CDS |
| TTTGTAGAAGAAGAGTCGTC+TGG | 0.494360 | 4_1:+35944241 | Msa0545550:intron |
| CTAGGACTGTATGATGTTCA+AGG | 0.496397 | 4_1:+35946051 | Msa0545550:CDS |
| GGTGTTCTGCTAGGTGGGCG+CGG | 0.497821 | 4_1:+35946384 | Msa0545550:CDS |
| CCTACTGTGAACTCGAACAA+TGG | 0.498857 | 4_1:+35944009 | Msa0545550:CDS |
| GTTATCTTGGATCTGAATAT+GGG | 0.501930 | 4_1:+35946436 | Msa0545550:CDS |
| AACTTCATGGGAGAGAACTC+CGG | 0.501996 | 4_1:+35946341 | Msa0545550:CDS |
| GGCTTACAATCGTGGGGTGG+CGG | 0.502230 | 4_1:-35951781 | None:intergenic |
| CAACGCCAAACTGCACTGTT+CGG | 0.504179 | 4_1:-35950539 | None:intergenic |
| GTCGGTGTCCGATGGGAAGC+GGG | 0.505218 | 4_1:-35943847 | None:intergenic |
| CCGCTGAAGGGAATGATGCT+TGG | 0.505435 | 4_1:-35950505 | None:intergenic |
| TCTCTCTGCGGGAATCTCAA+TGG | 0.506234 | 4_1:+35944044 | Msa0545550:CDS |
| CGAGGATTCAACTTTGCCTC+AGG | 0.506588 | 4_1:+35946937 | Msa0545550:CDS |
| GGTTATACTTGCCTCTTTGG+AGG | 0.509164 | 4_1:+35950892 | Msa0545550:intron |
| TCTCCATACATACAGAAGAA+AGG | 0.510842 | 4_1:-35952355 | None:intergenic |
| ATACTTGCCTCTTTGGAGGA+AGG | 0.511857 | 4_1:+35950896 | Msa0545550:CDS |
| GGATCCTTAGCCGCCGCTGA+AGG | 0.513641 | 4_1:-35950518 | None:intergenic |
| TGGGAGAGAACTCCGGGAGC+AGG | 0.514819 | 4_1:+35946348 | Msa0545550:CDS |
| AACAACCAATCACCGGCATA+CGG | 0.516528 | 4_1:+35943933 | Msa0545550:CDS |
| GTGGCGGAAAAGGAAGTGTT+GGG | 0.517684 | 4_1:-35951765 | None:intergenic |
| TCTATCTTTGCTCGTGCACA+AGG | 0.519507 | 4_1:+35950608 | Msa0545550:CDS |
| AAGCAATGCAGCACGACTCA+AGG | 0.521837 | 4_1:-35951671 | None:intergenic |
| AAACTTGTTCAGTATAGCAA+TGG | 0.522079 | 4_1:+35950989 | Msa0545550:CDS |
| TGCAGATCGTGCTTTACTCC+CGG | 0.525255 | 4_1:+35946686 | Msa0545550:CDS |
| AGGACACAACTAAAAGCATA+TGG | 0.526691 | 4_1:-35947837 | None:intergenic |
| GAGCAGGACGTTGATGGAAG+CGG | 0.527102 | 4_1:+35952016 | Msa0545550:CDS |
| GCAAAGATTAGGCGCGGTAG+CGG | 0.527669 | 4_1:-35951067 | None:intergenic |
| GACTGTGGCTCTCACCGCCA+TGG | 0.528854 | 4_1:-35943823 | None:intergenic |
| ACTTCATGGGAGAGAACTCC+GGG | 0.529692 | 4_1:+35946342 | Msa0545550:CDS |
| CGCGTGCGTCGGTGTCCGAT+GGG | 0.529714 | 4_1:-35943854 | None:intergenic |
| GCAGCTGTTGCTGTTCAAGC+AGG | 0.531145 | 4_1:+35946809 | Msa0545550:CDS |
| CTGGATACACAGCACGATGA+AGG | 0.531538 | 4_1:-35951600 | None:intergenic |
| CAGTTGAGGTTCTTAATCGC+AGG | 0.531656 | 4_1:-35947857 | None:intergenic |
| TTCGAAGGAGAGCAAAGATT+AGG | 0.531945 | 4_1:-35951078 | None:intergenic |
| AGCGAAGAAGAGGGTTTCGA+AGG | 0.532011 | 4_1:-35951093 | None:intergenic |
| TTCGTCGACGGCGGCGAAGG+GGG | 0.532095 | 4_1:-35943910 | None:intergenic |
| GCCGGAAACTTCGCGTGCGT+CGG | 0.532165 | 4_1:-35943865 | None:intergenic |
| TCGCCGCTGGATCCGTATGC+CGG | 0.535263 | 4_1:-35943945 | None:intergenic |
| CAGAAAGTTCTCGAAAATTG+AGG | 0.536111 | 4_1:-35951987 | None:intergenic |
| AATGCACATTCGAGTCATGC+TGG | 0.536280 | 4_1:+35952221 | Msa0545550:three_prime_UTR |
| TGGATGGTGTTCTGCTAGGT+GGG | 0.539403 | 4_1:+35946379 | Msa0545550:CDS |
| CACAGTCTCCCGCTTCCCAT+CGG | 0.541862 | 4_1:+35943839 | Msa0545550:CDS |
| CTGAGGCAAAGTTGAATCCT+CGG | 0.545822 | 4_1:-35946936 | None:intergenic |
| TGTAGATCTTGAATTGCCGC+AGG | 0.546763 | 4_1:+35944133 | Msa0545550:CDS |
| TCAGTTGATAAGGTTCCCTC+TGG | 0.548943 | 4_1:-35946108 | None:intergenic |
| ATGGATGGTGTTCTGCTAGG+TGG | 0.551445 | 4_1:+35946378 | Msa0545550:CDS |
| ATATGCTTGTTTGTCTGGAG+TGG | 0.553400 | 4_1:-35951638 | None:intergenic |
| AATTTCTGAGTATTGAAAGT+GGG | 0.554213 | 4_1:+35946888 | Msa0545550:CDS |
| TCTTCGTGAAAGCGAAGAAG+AGG | 0.558946 | 4_1:-35951103 | None:intergenic |
| TCCGGGAGCAGGTCAAGGAA+TGG | 0.558963 | 4_1:+35946359 | Msa0545550:CDS |
| TGGAGAAGGCTTACAATCGT+GGG | 0.559626 | 4_1:-35951788 | None:intergenic |
| TCCAGGCTTAAATTCAGTTG+AGG | 0.559717 | 4_1:-35947871 | None:intergenic |
| ACGTTTAACTGCAGCTTCCG+AGG | 0.560154 | 4_1:+35945851 | Msa0545550:intron |
| AGAACTCCGGGAGCAGGTCA+AGG | 0.560894 | 4_1:+35946354 | Msa0545550:CDS |
| TCAGAATTGTGAATGCATCC+AGG | 0.561123 | 4_1:-35951717 | None:intergenic |
| TTTCGTCGACGGCGGCGAAG+GGG | 0.561680 | 4_1:-35943911 | None:intergenic |
| TTTCGAGTGCAGATGCAATA+CGG | 0.562326 | 4_1:-35946305 | None:intergenic |
| ACGCCCAGCAATTCTCGCAC+CGG | 0.563157 | 4_1:-35943977 | None:intergenic |
| AAGCGGTCTTACAAGTGTGA+TGG | 0.563547 | 4_1:+35952033 | Msa0545550:CDS |
| AGCGGTCTTACAAGTGTGAT+GGG | 0.563562 | 4_1:+35952034 | Msa0545550:CDS |
| GCTACATTCAGCCATAAACT+AGG | 0.564484 | 4_1:+35946033 | Msa0545550:CDS |
| GGTGGCGGAAAAGGAAGTGT+TGG | 0.565621 | 4_1:-35951766 | None:intergenic |
| CATCATTGTACTGAGCTACA+AGG | 0.566330 | 4_1:-35950961 | None:intergenic |
| ATTGACATTGCACCCCAAAA+GGG | 0.566697 | 4_1:-35952116 | None:intergenic |
| GTGAACTCGAACAATGGTCG+TGG | 0.567979 | 4_1:+35944015 | Msa0545550:CDS |
| GATCCTTAGCCGCCGCTGAA+GGG | 0.570725 | 4_1:-35950517 | None:intergenic |
| GTTGATAAGGTTCCCTCTGG+AGG | 0.571045 | 4_1:-35946105 | None:intergenic |
| TGAAATGCAATCTGGAGTGT+AGG | 0.571328 | 4_1:-35949011 | None:intergenic |
| TGGATACACAGCACGATGAA+GGG | 0.573532 | 4_1:-35951599 | None:intergenic |
| AGTGAGTTCCAGAAACTCCT+CGG | 0.575110 | 4_1:-35945868 | None:intergenic |
| TTGGAGAAGGCTTACAATCG+TGG | 0.575250 | 4_1:-35951789 | None:intergenic |
| AGCTTGTCCTGTTTATGTTG+CGG | 0.575253 | 4_1:+35944279 | Msa0545550:CDS |
| CAGGAGGGGTCTCTACAAGC+AGG | 0.576846 | 4_1:+35949072 | Msa0545550:CDS |
| CGATGGGAAGCGGGAGACTG+TGG | 0.577349 | 4_1:-35943838 | None:intergenic |
| ATCATTTCAGCACAAGATTG+CGG | 0.578336 | 4_1:-35944101 | None:intergenic |
| ACTTAGACCAACAACTTCAT+GGG | 0.578621 | 4_1:+35946329 | Msa0545550:CDS |
| GCATTGCTGGCAGCTTTGGA+AGG | 0.578867 | 4_1:+35945897 | Msa0545550:CDS |
| CCTGAATTGGAAAGCTCCTG+AGG | 0.579251 | 4_1:-35949053 | None:intergenic |
| ATTTCTGAGTATTGAAAGTG+GGG | 0.579696 | 4_1:+35946889 | Msa0545550:CDS |
| TGAACTCGAACAATGGTCGT+GGG | 0.581436 | 4_1:+35944016 | Msa0545550:CDS |
| ATGCAGCACGACTCAAGGAA+TGG | 0.581669 | 4_1:-35951666 | None:intergenic |
| TTAATCCTATGTCAATTAGT+GGG | 0.583542 | 4_1:+35952454 | Msa0545550:three_prime_UTR |
| AAAAGTACAACAAAGGGGAG+GGG | 0.584927 | 4_1:-35952250 | None:intergenic |
| GGAGCTTTCCAATTCAGGAG+GGG | 0.585265 | 4_1:+35949058 | Msa0545550:CDS |
| CAGGAGCTTTCCAATTCAGG+AGG | 0.588900 | 4_1:+35949056 | Msa0545550:CDS |
| TCGAACTCCTTCCTCCAAAG+AGG | 0.590116 | 4_1:-35950903 | None:intergenic |
| CTTCGTGAAAGCGAAGAAGA+GGG | 0.595311 | 4_1:-35951102 | None:intergenic |
| GCAGGTATCGAATGCTGAGT+AGG | 0.598649 | 4_1:+35947814 | Msa0545550:intron |
| TTGATAAGGTTCCCTCTGGA+GGG | 0.600988 | 4_1:-35946104 | None:intergenic |
| AAATTTCTGAGTATTGAAAG+TGG | 0.602100 | 4_1:+35946887 | Msa0545550:CDS |
| GGAGCCAGAAACTGTAACAA+AGG | 0.605620 | 4_1:-35946147 | None:intergenic |
| GGAGCAGGTCAAGGAATGGA+TGG | 0.606280 | 4_1:+35946363 | Msa0545550:CDS |
| GAAGTTTCCGGCCTATTATG+GGG | 0.608807 | 4_1:+35943876 | Msa0545550:CDS |
| CCATTGTTCGAGTTCACAGT+AGG | 0.615293 | 4_1:-35944009 | None:intergenic |
| GGAATGGATGGTGTTCTGCT+AGG | 0.615548 | 4_1:+35946375 | Msa0545550:CDS |
| GGTGAACGTTACACGCACAC+TGG | 0.616862 | 4_1:-35943783 | None:intergenic |
| TGAGCAATATGCCAGCAAAA+GGG | 0.618201 | 4_1:+35946659 | Msa0545550:CDS |
| TCGTGGGGTTGTTCTCTCTG+CGG | 0.618881 | 4_1:+35944032 | Msa0545550:CDS |
| AAATTGAGTGAGTCAAGCAC+CGG | 0.620533 | 4_1:+35943716 | Msa0545550:five_prime_UTR |
| AGGAGCTTTCCAATTCAGGA+GGG | 0.623320 | 4_1:+35949057 | Msa0545550:CDS |
| CGACGAAAACAACCAATCAC+CGG | 0.624518 | 4_1:+35943926 | Msa0545550:CDS |
| CAGTTGAGGACATTGAGAGA+AGG | 0.625081 | 4_1:-35951041 | None:intergenic |
| ATTGACTAGCACTTCAAAAG+GGG | 0.625538 | 4_1:-35952289 | None:intergenic |
| TTTGTGTTTGAGAACAACGT+TGG | 0.626593 | 4_1:+35948070 | Msa0545550:CDS |
| TCACCGGCATACGGATCCAG+CGG | 0.628669 | 4_1:+35943942 | Msa0545550:CDS |
| GGTTACTCCCCATAATAGGC+CGG | 0.630445 | 4_1:-35943883 | None:intergenic |
| AGCATCATTCCCTTCAGCGG+CGG | 0.633041 | 4_1:+35950508 | Msa0545550:CDS |
| TTGGAGGAAGGAGTTCGAGA+GGG | 0.633843 | 4_1:+35950908 | Msa0545550:CDS |
| CCAAGCATCATTCCCTTCAG+CGG | 0.634548 | 4_1:+35950505 | Msa0545550:CDS |
| CGTGCTGCATTGCTTACCAG+TGG | 0.636955 | 4_1:+35951679 | Msa0545550:CDS |
| ACAGCACGATGAAGGGAACT+CGG | 0.637877 | 4_1:-35951592 | None:intergenic |
| GAATTGGAAAGCTCCTGAGG+AGG | 0.644293 | 4_1:-35949050 | None:intergenic |
| GAGCTGGACAATTGGACACA+AGG | 0.645504 | 4_1:+35946628 | Msa0545550:CDS |
| TTTCTTCTGAAGCTATTGAG+CGG | 0.651677 | 4_1:+35944069 | Msa0545550:CDS |
| GAAGGCTTACAATCGTGGGG+TGG | 0.653290 | 4_1:-35951784 | None:intergenic |
| TTTGGAGGAAGGAGTTCGAG+AGG | 0.660226 | 4_1:+35950907 | Msa0545550:CDS |
| GCAATATGCCAGCAAAAGGG+AGG | 0.669736 | 4_1:+35946662 | Msa0545550:CDS |
| TTGTCCTGTTTATGTTGCGG+CGG | 0.670289 | 4_1:+35944282 | Msa0545550:CDS |
| AGGAGAGCAAAGATTAGGCG+CGG | 0.677751 | 4_1:-35951073 | None:intergenic |
| GCACGACTCAAGGAATGGCG+AGG | 0.678813 | 4_1:-35951661 | None:intergenic |
| GTAGATCTTGAATTGCCGCA+GGG | 0.682012 | 4_1:+35944134 | Msa0545550:CDS |
| GGAGAAGGCTTACAATCGTG+GGG | 0.685934 | 4_1:-35951787 | None:intergenic |
| TGTCCAGCTCCATAATCAGG+AGG | 0.693912 | 4_1:-35946615 | None:intergenic |
| TTGACTAGCACTTCAAAAGG+GGG | 0.699485 | 4_1:-35952288 | None:intergenic |
| GATGAGACTTACATGTCCTG+AGG | 0.703037 | 4_1:-35946953 | None:intergenic |
| TTTCTGAGTATTGAAAGTGG+GGG | 0.710205 | 4_1:+35946890 | Msa0545550:CDS |
| GAACTCGAACAATGGTCGTG+GGG | 0.733919 | 4_1:+35944017 | Msa0545550:CDS |
| GCCCAGCAATTCTCGCACCG+GGG | 0.740060 | 4_1:-35943975 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTTAAACATATAATC+AGG | - | chr4_1:35950399-35950418 | None:intergenic | 10.0% |
| !!! | ATTTATAAGGTCTTTTTTAT+AGG | + | chr4_1:35945134-35945153 | Msa0545550:intron | 15.0% |
| !!! | TTTATAAGGTCTTTTTTATA+GGG | + | chr4_1:35945135-35945154 | Msa0545550:intron | 15.0% |
| !!! | TGTACAATTTTTTTAGATTT+TGG | + | chr4_1:35946183-35946202 | Msa0545550:intron | 15.0% |
| !!! | GTACAATTTTTTTAGATTTT+GGG | + | chr4_1:35946184-35946203 | Msa0545550:intron | 15.0% |
| !!! | TACAATTTTTTTAGATTTTG+GGG | + | chr4_1:35946185-35946204 | Msa0545550:intron | 15.0% |
| !! | ATGTTAACAAAAATCATATA+TGG | - | chr4_1:35946504-35946523 | None:intergenic | 15.0% |
| !! | TACATATCAAACAATTAAAA+TGG | - | chr4_1:35947018-35947037 | None:intergenic | 15.0% |
| !!! | TATAATACATACTTTAGTTT+TGG | + | chr4_1:35949721-35949740 | Msa0545550:intron | 15.0% |
| !! | TTAAAGAAAAAGTAATAATG+CGG | + | chr4_1:35950814-35950833 | Msa0545550:intron | 15.0% |
| !!! | CTTTATTTCTAAATTAAATG+TGG | - | chr4_1:35951331-35951350 | None:intergenic | 15.0% |
| !!! | CACATTTAATTTAGAAATAA+AGG | + | chr4_1:35951329-35951348 | Msa0545550:intron | 15.0% |
| !!! | ATTTAATTTAGAAATAAAGG+TGG | + | chr4_1:35951332-35951351 | Msa0545550:intron | 15.0% |
| !!! | GTTTTTGAATTTGATTGTTT+TGG | + | chr4_1:35944208-35944227 | Msa0545550:intron | 20.0% |
| !! | ACTTATCATGTAAGATTAAT+TGG | + | chr4_1:35944308-35944327 | Msa0545550:intron | 20.0% |
| !! | AATAGTTATTATCATTCGAA+AGG | - | chr4_1:35944679-35944698 | None:intergenic | 20.0% |
| !! | AAATCGTCATTAAAATTTAC+AGG | - | chr4_1:35945219-35945238 | None:intergenic | 20.0% |
| !!! | TTTGCTATCAATAGTAATTA+TGG | - | chr4_1:35945545-35945564 | None:intergenic | 20.0% |
| !! | TCTTATTGAAACTGTATAAA+AGG | + | chr4_1:35945647-35945666 | Msa0545550:intron | 20.0% |
| !! | ATAAAAGTTGCAGTAAATTT+GGG | - | chr4_1:35945701-35945720 | None:intergenic | 20.0% |
| !! | AATAAAAGTTGCAGTAAATT+TGG | - | chr4_1:35945702-35945721 | None:intergenic | 20.0% |
| !!! | AATCCGTAATTTTTTATTGA+AGG | + | chr4_1:35946266-35946285 | Msa0545550:intron | 20.0% |
| !! | AATACCAGATCTTTATAAAA+TGG | - | chr4_1:35946720-35946739 | None:intergenic | 20.0% |
| !!! | TTCAATACTCAGAAATTTTA+GGG | - | chr4_1:35946885-35946904 | None:intergenic | 20.0% |
| !!! | TTTCAATACTCAGAAATTTT+AGG | - | chr4_1:35946886-35946905 | None:intergenic | 20.0% |
| !! | GGTACTTGTATAAAAAAATA+AGG | - | chr4_1:35946918-35946937 | None:intergenic | 20.0% |
| !! | AATTGTTTGATATGTATCAA+TGG | + | chr4_1:35947022-35947041 | Msa0545550:intron | 20.0% |
| !! | ATTGTTTGATATGTATCAAT+GGG | + | chr4_1:35947023-35947042 | Msa0545550:intron | 20.0% |
| !! | AATAAGCATTCAATTTCATA+AGG | - | chr4_1:35947164-35947183 | None:intergenic | 20.0% |
| !! | TCTGTAAGTTTGTAATAAAT+AGG | + | chr4_1:35947460-35947479 | Msa0545550:intron | 20.0% |
| !! | CTGTAAGTTTGTAATAAATA+GGG | + | chr4_1:35947461-35947480 | Msa0545550:intron | 20.0% |
| !!! | TTAATTTGTGACTGTTTATA+TGG | + | chr4_1:35948168-35948187 | Msa0545550:intron | 20.0% |
| !!! | TAATTTGTGACTGTTTATAT+GGG | + | chr4_1:35948169-35948188 | Msa0545550:intron | 20.0% |
| !!! | GACTTTATATTTTTATTGCA+AGG | + | chr4_1:35948246-35948265 | Msa0545550:intron | 20.0% |
| !! | GATATAAAAACTAATGAATG+TGG | - | chr4_1:35948291-35948310 | None:intergenic | 20.0% |
| !!! | AAAATACAATCACTACTTTT+AGG | - | chr4_1:35948857-35948876 | None:intergenic | 20.0% |
| !!! | CATATTGCTATTTTATTTCA+TGG | + | chr4_1:35949154-35949173 | Msa0545550:intron | 20.0% |
| !! | ACAGAAAATAAAATTCCTAT+TGG | - | chr4_1:35949351-35949370 | None:intergenic | 20.0% |
| !! | TATGTTCCTACAAAATTAAT+CGG | + | chr4_1:35949772-35949791 | Msa0545550:intron | 20.0% |
| !!! | ACTAGTTCTTATGAATATTT+CGG | + | chr4_1:35950014-35950033 | Msa0545550:intron | 20.0% |
| !! | ACTAAATTGCTCAAATAAAT+AGG | - | chr4_1:35951188-35951207 | None:intergenic | 20.0% |
| !!! | ATTTAAAATGTACTACAAAC+AGG | - | chr4_1:35951375-35951394 | None:intergenic | 20.0% |
| !!! | CATTTTATTATTTAGTTACC+CGG | - | chr4_1:35951481-35951500 | None:intergenic | 20.0% |
| !!! | ACTAAAAAAAGTACAACAAA+GGG | - | chr4_1:35952259-35952278 | None:intergenic | 20.0% |
| !!! | TTTTGATTTTGGTTTTGGTT+AGG | + | chr4_1:35944185-35944204 | Msa0545550:intron | 25.0% |
| !!! | TTTGATTTTGGTTTTGGTTA+GGG | + | chr4_1:35944186-35944205 | Msa0545550:intron | 25.0% |
| !! | TGGTATTTGAATTTGATAGT+TGG | + | chr4_1:35944572-35944591 | Msa0545550:intron | 25.0% |
| !! | ATTTGAATTTGATAGTTGGA+TGG | + | chr4_1:35944576-35944595 | Msa0545550:intron | 25.0% |
| !! | TTTGAATTTGATAGTTGGAT+GGG | + | chr4_1:35944577-35944596 | Msa0545550:intron | 25.0% |
| ! | TGATTTCAAACCAAACAATT+AGG | - | chr4_1:35944886-35944905 | None:intergenic | 25.0% |
| !! | AAGTTTTTACTCACCTTAAT+CGG | + | chr4_1:35944905-35944924 | Msa0545550:intron | 25.0% |
| !! | AGTAATGTAAATGTTGCTTA+TGG | + | chr4_1:35945285-35945304 | Msa0545550:intron | 25.0% |
| !! | TTTTTCCATGCTTTACAATA+TGG | + | chr4_1:35945394-35945413 | Msa0545550:intron | 25.0% |
| !! | GGCAAAATAGATCAATATTT+TGG | - | chr4_1:35945598-35945617 | None:intergenic | 25.0% |
| ! | TAAAAGTTGCAGTAAATTTG+GGG | - | chr4_1:35945700-35945719 | None:intergenic | 25.0% |
| !!! | ATCATTTTGTGATTGTTGTT+TGG | + | chr4_1:35945805-35945824 | Msa0545550:intron | 25.0% |
| !! | ATATTTTTCTTTCCTGCATA+AGG | + | chr4_1:35945940-35945959 | Msa0545550:intron | 25.0% |
| !! | ATGAAAACATTTTTCACAAC+AGG | - | chr4_1:35946084-35946103 | None:intergenic | 25.0% |
| ! | AATTGTACAGCATTAACATA+CGG | - | chr4_1:35946172-35946191 | None:intergenic | 25.0% |
| ! | CCACCTTCAATAAAAAATTA+CGG | - | chr4_1:35946272-35946291 | None:intergenic | 25.0% |
| ! | ATCATATATGGTAAGATTTG+TGG | - | chr4_1:35946492-35946511 | None:intergenic | 25.0% |
| !! | TTCTTTAACTTCAAGGAAAT+GGG | - | chr4_1:35946771-35946790 | None:intergenic | 25.0% |
| !!! | AAATTTCTGAGTATTGAAAG+TGG | + | chr4_1:35946887-35946906 | Msa0545550:CDS | 25.0% |
| !!! | AATTTCTGAGTATTGAAAGT+GGG | + | chr4_1:35946888-35946907 | Msa0545550:CDS | 25.0% |
| !!! | ATTTTTTTATACAAGTACCG+AGG | + | chr4_1:35946919-35946938 | Msa0545550:CDS | 25.0% |
| !!! | AACAATTAAAATGGTTTTGC+CGG | - | chr4_1:35947009-35947028 | None:intergenic | 25.0% |
| ! | TTGGTACAAAAATATCCAAT+GGG | - | chr4_1:35947141-35947160 | None:intergenic | 25.0% |
| !! | TGATTGATAAAAAGCATAAG+TGG | - | chr4_1:35947233-35947252 | None:intergenic | 25.0% |
| !! | TTTTACTAATAGACCTAAAC+AGG | + | chr4_1:35947354-35947373 | Msa0545550:intron | 25.0% |
| ! | TAAGTTTGTAATAAATAGGG+AGG | + | chr4_1:35947464-35947483 | Msa0545550:intron | 25.0% |
| ! | CAAATAGTTTAGTCAGTATT+TGG | + | chr4_1:35947495-35947514 | Msa0545550:intron | 25.0% |
| ! | CAAATTCACAAATATCATTG+CGG | + | chr4_1:35947763-35947782 | Msa0545550:intron | 25.0% |
| ! | AAATTCACAAATATCATTGC+GGG | + | chr4_1:35947764-35947783 | Msa0545550:intron | 25.0% |
| ! | AATTTGTGACTGTTTATATG+GGG | + | chr4_1:35948170-35948189 | Msa0545550:intron | 25.0% |
| !! | TTTAACTCTCTTTGTTCTTT+TGG | + | chr4_1:35948375-35948394 | Msa0545550:intron | 25.0% |
| !! | TTAACTCTCTTTGTTCTTTT+GGG | + | chr4_1:35948376-35948395 | Msa0545550:intron | 25.0% |
| ! | CATTATTCATTATCAAGCAA+AGG | - | chr4_1:35948517-35948536 | None:intergenic | 25.0% |
| ! | ATACTCTTAAAACTAAGTCA+CGG | - | chr4_1:35948553-35948572 | None:intergenic | 25.0% |
| !!! | TATTTGAGCAATTTTTCAAC+AGG | - | chr4_1:35948577-35948596 | None:intergenic | 25.0% |
| ! | TGATTTATGATGTAAGCATT+TGG | - | chr4_1:35948654-35948673 | None:intergenic | 25.0% |
| ! | ATAATTTCTACCACAAGATA+TGG | + | chr4_1:35948914-35948933 | Msa0545550:intron | 25.0% |
| ! | GATGTTTCTTATATCATGTA+TGG | + | chr4_1:35949127-35949146 | Msa0545550:intron | 25.0% |
| ! | TTTCTTATATCATGTATGGT+AGG | + | chr4_1:35949131-35949150 | Msa0545550:intron | 25.0% |
| ! | TTCTCTTATTACATGTTCAA+AGG | + | chr4_1:35949324-35949343 | Msa0545550:intron | 25.0% |
| !! | TATTTTCTGTTAGTTGAAGA+TGG | + | chr4_1:35949361-35949380 | Msa0545550:intron | 25.0% |
| !! | ATTTTCTGTTAGTTGAAGAT+GGG | + | chr4_1:35949362-35949381 | Msa0545550:intron | 25.0% |
| ! | ATTCTATTCACGATACAAAT+CGG | - | chr4_1:35949451-35949470 | None:intergenic | 25.0% |
| ! | GACTTAGTCATTTATGTTTA+AGG | + | chr4_1:35949617-35949636 | Msa0545550:intron | 25.0% |
| !!! | ATACATACTTTAGTTTTGGT+AGG | + | chr4_1:35949725-35949744 | Msa0545550:intron | 25.0% |
| ! | ATGTTCCTACAAAATTAATC+GGG | + | chr4_1:35949773-35949792 | Msa0545550:intron | 25.0% |
| ! | CTAGTTTCAAAATGTTCAAA+GGG | - | chr4_1:35949999-35950018 | None:intergenic | 25.0% |
| !! | ACTAGTTTCAAAATGTTCAA+AGG | - | chr4_1:35950000-35950019 | None:intergenic | 25.0% |
| ! | TTTCTCTTCATTGTGAAATT+TGG | + | chr4_1:35950064-35950083 | Msa0545550:intron | 25.0% |
| ! | TTTACTTTCTAGATTGATTG+TGG | + | chr4_1:35950295-35950314 | Msa0545550:intron | 25.0% |
| ! | ATCCAAAGTTTACTTAATGA+TGG | + | chr4_1:35950433-35950452 | Msa0545550:intron | 25.0% |
| ! | ATCCATCATTAAGTAAACTT+TGG | - | chr4_1:35950438-35950457 | None:intergenic | 25.0% |
| !!! | ATGATGGATTAAAGTCTTTT+TGG | + | chr4_1:35950449-35950468 | Msa0545550:intron | 25.0% |
| !!! | TGATGGATTAAAGTCTTTTT+GGG | + | chr4_1:35950450-35950469 | Msa0545550:intron | 25.0% |
| ! | AGTGATATTCAAAATGTTTG+AGG | + | chr4_1:35951290-35951309 | Msa0545550:intron | 25.0% |
| !! | TTAAATTTGTTTCCCTTAGT+CGG | + | chr4_1:35951389-35951408 | Msa0545550:intron | 25.0% |
| ! | AAAAGTAAGCTGAAATTAAC+CGG | + | chr4_1:35951459-35951478 | Msa0545550:intron | 25.0% |
| ! | CCTTGAATAAAAATGAGTTT+AGG | - | chr4_1:35951953-35951972 | None:intergenic | 25.0% |
| !!! | CCTAAACTCATTTTTATTCA+AGG | + | chr4_1:35951950-35951969 | Msa0545550:CDS | 25.0% |
| !!! | AAACTCATTTTTATTCAAGG+AGG | + | chr4_1:35951953-35951972 | Msa0545550:CDS | 25.0% |
| !!! | AACTCATTTTTATTCAAGGA+GGG | + | chr4_1:35951954-35951973 | Msa0545550:CDS | 25.0% |
| !! | ATAAAATAGAGATCCCTTTT+GGG | + | chr4_1:35952103-35952122 | Msa0545550:exon | 25.0% |
| ! | ATTTACAGATACAGGAAAAT+AGG | + | chr4_1:35952137-35952156 | Msa0545550:three_prime_UTR | 25.0% |
| ! | AGGAAATAATACGTACATTA+AGG | + | chr4_1:35952157-35952176 | Msa0545550:three_prime_UTR | 25.0% |
| ! | GGAAATAATACGTACATTAA+GGG | + | chr4_1:35952158-35952177 | Msa0545550:three_prime_UTR | 25.0% |
| !! | CTAAAAAAAGTACAACAAAG+GGG | - | chr4_1:35952258-35952277 | None:intergenic | 25.0% |
| !! | GACTAAAAAAAGTACAACAA+AGG | - | chr4_1:35952260-35952279 | None:intergenic | 25.0% |
| ! | TTAATCCTATGTCAATTAGT+GGG | + | chr4_1:35952454-35952473 | Msa0545550:three_prime_UTR | 25.0% |
| ! | AATTAGTGGGAAAATGATAT+TGG | + | chr4_1:35952467-35952486 | Msa0545550:three_prime_UTR | 25.0% |
| ! | ATTAGTGGGAAAATGATATT+GGG | + | chr4_1:35952468-35952487 | Msa0545550:three_prime_UTR | 25.0% |
| ! | CACTCAATTTTTGTGTACTT+CGG | - | chr4_1:35943706-35943725 | None:intergenic | 30.0% |
| GTGATCATTGTGATGATAAT+AGG | + | chr4_1:35944359-35944378 | Msa0545550:intron | 30.0% | |
| CAGTAAACAAACAAAACAAG+TGG | - | chr4_1:35944616-35944635 | None:intergenic | 30.0% | |
| ! | ATTTTTCTGTGTCAACACTT+CGG | + | chr4_1:35944716-35944735 | Msa0545550:intron | 30.0% |
| TTAAAATTTACAGGCCCATT+AGG | - | chr4_1:35945210-35945229 | None:intergenic | 30.0% | |
| TATGGTGATTTGAATTTGTG+TGG | + | chr4_1:35945303-35945322 | Msa0545550:intron | 30.0% | |
| TCAAACCAAATGACGTTTAA+TGG | + | chr4_1:35945439-35945458 | Msa0545550:intron | 30.0% | |
| ATAAAAGACAAAGAAAGCCT+AGG | + | chr4_1:35945475-35945494 | Msa0545550:intron | 30.0% | |
| TAATCTGATAAACATTGCCT+AGG | - | chr4_1:35945495-35945514 | None:intergenic | 30.0% | |
| ! | TTGATAGCAAAAGTAGATAG+AGG | + | chr4_1:35945554-35945573 | Msa0545550:intron | 30.0% |
| GTTTCAATAAGACCAAGAAT+AGG | - | chr4_1:35945639-35945658 | None:intergenic | 30.0% | |
| ATAAAAGGATGCAATCTTCA+AGG | + | chr4_1:35945662-35945681 | Msa0545550:intron | 30.0% | |
| AAATGATGTCCAGCATATTT+AGG | - | chr4_1:35945792-35945811 | None:intergenic | 30.0% | |
| ! | ACATTTTTCACAACAGGTAT+TGG | - | chr4_1:35946078-35946097 | None:intergenic | 30.0% |
| ATTGTACAGCATTAACATAC+GGG | - | chr4_1:35946171-35946190 | None:intergenic | 30.0% | |
| !!! | CCGTAATTTTTTATTGAAGG+TGG | + | chr4_1:35946269-35946288 | Msa0545550:intron | 30.0% |
| AGTTATCTTGGATCTGAATA+TGG | + | chr4_1:35946435-35946454 | Msa0545550:CDS | 30.0% | |
| GTTATCTTGGATCTGAATAT+GGG | + | chr4_1:35946436-35946455 | Msa0545550:CDS | 30.0% | |
| AATAGCTAGTTGAAACTTTG+AGG | - | chr4_1:35946549-35946568 | None:intergenic | 30.0% | |
| ! | GACACCATTTTATAAAGATC+TGG | + | chr4_1:35946713-35946732 | Msa0545550:CDS | 30.0% |
| ! | GTTCTTTAACTTCAAGGAAA+TGG | - | chr4_1:35946772-35946791 | None:intergenic | 30.0% |
| ! | ATGTCAGTTCTTTAACTTCA+AGG | - | chr4_1:35946778-35946797 | None:intergenic | 30.0% |
| ! | ATCAGTGTACTCATTTGTTA+CGG | - | chr4_1:35946855-35946874 | None:intergenic | 30.0% |
| ! | AACAAATGAGTACACTGATT+TGG | + | chr4_1:35946856-35946875 | Msa0545550:CDS | 30.0% |
| !! | ATTTCTGAGTATTGAAAGTG+GGG | + | chr4_1:35946889-35946908 | Msa0545550:CDS | 30.0% |
| ! | TTTATCCAATACTTGCTGAT+TGG | + | chr4_1:35947051-35947070 | Msa0545550:intron | 30.0% |
| CAATGGGATTTAAGAGAAAA+TGG | - | chr4_1:35947125-35947144 | None:intergenic | 30.0% | |
| ! | CATTTTCTCTTAAATCCCAT+TGG | + | chr4_1:35947123-35947142 | Msa0545550:intron | 30.0% |
| GTTGGTACAAAAATATCCAA+TGG | - | chr4_1:35947142-35947161 | None:intergenic | 30.0% | |
| AGCATTCAATTTCATAAGGT+TGG | - | chr4_1:35947160-35947179 | None:intergenic | 30.0% | |
| GCATAAGTGGTCAATTTAAT+TGG | - | chr4_1:35947220-35947239 | None:intergenic | 30.0% | |
| TCAATCACTTACCTTAAATG+TGG | + | chr4_1:35947246-35947265 | Msa0545550:intron | 30.0% | |
| TGTAATAAATAGGGAGGTTA+AGG | + | chr4_1:35947470-35947489 | Msa0545550:intron | 30.0% | |
| GTAATAAATAGGGAGGTTAA+GGG | + | chr4_1:35947471-35947490 | Msa0545550:intron | 30.0% | |
| TAATAAATAGGGAGGTTAAG+GGG | + | chr4_1:35947472-35947491 | Msa0545550:intron | 30.0% | |
| GTTTAGTCAGTATTTGGTTA+AGG | + | chr4_1:35947501-35947520 | Msa0545550:intron | 30.0% | |
| TCAGTATTTGGTTAAGGAAT+TGG | + | chr4_1:35947507-35947526 | Msa0545550:intron | 30.0% | |
| CAGTATTTGGTTAAGGAATT+GGG | + | chr4_1:35947508-35947527 | Msa0545550:intron | 30.0% | |
| AAACTTCCTATGCTGTATTA+TGG | + | chr4_1:35947593-35947612 | Msa0545550:intron | 30.0% | |
| TATTTGCAACATGTTAGAAC+TGG | - | chr4_1:35947723-35947742 | None:intergenic | 30.0% | |
| TGAATTTAAGCCTGGAAATT+CGG | + | chr4_1:35947878-35947897 | Msa0545550:CDS | 30.0% | |
| ! | TGTTGAACATTTTCATACTG+TGG | - | chr4_1:35948010-35948029 | None:intergenic | 30.0% |
| ! | CTGAATAACACAAAAGTACA+AGG | - | chr4_1:35948227-35948246 | None:intergenic | 30.0% |
| ! | TATATCGATTGTTTAGTGTG+TGG | + | chr4_1:35948305-35948324 | Msa0545550:intron | 30.0% |
| TGGATGCACAAACTATAAAA+GGG | - | chr4_1:35948352-35948371 | None:intergenic | 30.0% | |
| TTGGATGCACAAACTATAAA+AGG | - | chr4_1:35948353-35948372 | None:intergenic | 30.0% | |
| GATTCCAGGAAAACAAAATA+TGG | - | chr4_1:35948761-35948780 | None:intergenic | 30.0% | |
| CAGCAAAACATTATCTGAAT+AGG | - | chr4_1:35948942-35948961 | None:intergenic | 30.0% | |
| ! | ACCTATTTCTCTTTATCACT+GGG | + | chr4_1:35949231-35949250 | Msa0545550:intron | 30.0% |
| ! | TATGTGTAAGATTTGAGACT+TGG | + | chr4_1:35949656-35949675 | Msa0545550:intron | 30.0% |
| AAAATCGCAACTAAGATCAA+AGG | - | chr4_1:35949753-35949772 | None:intergenic | 30.0% | |
| ! | TTCTACCCGATTAATTTTGT+AGG | - | chr4_1:35949781-35949800 | None:intergenic | 30.0% |
| ATTCCTAAGGAATGTTAGTT+TGG | + | chr4_1:35950040-35950059 | Msa0545550:intron | 30.0% | |
| AAACCAAACTAACATTCCTT+AGG | - | chr4_1:35950046-35950065 | None:intergenic | 30.0% | |
| AACACATAACAGCAATGAAA+AGG | - | chr4_1:35950351-35950370 | None:intergenic | 30.0% | |
| ! | TTTCATTGCTGTTATGTGTT+TGG | + | chr4_1:35950351-35950370 | Msa0545550:intron | 30.0% |
| TAATCAGGAAACATAAGACT+CGG | - | chr4_1:35950384-35950403 | None:intergenic | 30.0% | |
| GAAAACTAACATCAATCCAA+GGG | - | chr4_1:35950664-35950683 | None:intergenic | 30.0% | |
| ATTAAATTCGAACAGTAGAG+CGG | - | chr4_1:35950686-35950705 | None:intergenic | 30.0% | |
| !!! | TTACTTGTACTGTTTTTTGC+AGG | + | chr4_1:35950871-35950890 | Msa0545550:intron | 30.0% |
| ! | AAACTTGTTCAGTATAGCAA+TGG | + | chr4_1:35950989-35951008 | Msa0545550:CDS | 30.0% |
| TCTATCTTCAATGTCTGTTT+AGG | + | chr4_1:35951149-35951168 | Msa0545550:CDS | 30.0% | |
| CATGATCATGTCATAAAAAC+TGG | + | chr4_1:35951211-35951230 | Msa0545550:intron | 30.0% | |
| AACAGGAAAATTATGTTCGA+AGG | - | chr4_1:35951358-35951377 | None:intergenic | 30.0% | |
| AAAGTAAGCTGAAATTAACC+GGG | + | chr4_1:35951460-35951479 | Msa0545550:intron | 30.0% | |
| !!! | TTTTTTATGTTGTAGTGCGT+TGG | + | chr4_1:35951567-35951586 | Msa0545550:intron | 30.0% |
| AATGCATCCAGGAAAAATAT+TGG | - | chr4_1:35951709-35951728 | None:intergenic | 30.0% | |
| !! | TGTGTTTTATTCTTCAACTG+CGG | + | chr4_1:35951741-35951760 | Msa0545550:CDS | 30.0% |
| TACAGAGGAAGGAAAAAAAT+TGG | - | chr4_1:35951811-35951830 | None:intergenic | 30.0% | |
| TATATGCAAAATTCCTTGTC+AGG | + | chr4_1:35951878-35951897 | Msa0545550:intron | 30.0% | |
| CTTTCACAGTTATATCTTCA+AGG | - | chr4_1:35952072-35952091 | None:intergenic | 30.0% | |
| ! | CATAAAATAGAGATCCCTTT+TGG | + | chr4_1:35952102-35952121 | Msa0545550:exon | 30.0% |
| ! | TAAAATAGAGATCCCTTTTG+GGG | + | chr4_1:35952104-35952123 | Msa0545550:exon | 30.0% |
| CAATGTCAATTTACAGATAC+AGG | + | chr4_1:35952129-35952148 | Msa0545550:three_prime_UTR | 30.0% | |
| TAACATCAGTCATCAAAATC+TGG | - | chr4_1:35952437-35952456 | None:intergenic | 30.0% | |
| GTTAATCCTATGTCAATTAG+TGG | + | chr4_1:35952453-35952472 | Msa0545550:three_prime_UTR | 30.0% | |
| ! | ATTTTCCCACTAATTGACAT+AGG | - | chr4_1:35952462-35952481 | None:intergenic | 30.0% |
| !! | TTTCTTCTGAAGCTATTGAG+CGG | + | chr4_1:35944069-35944088 | Msa0545550:CDS | 35.0% |
| ATCATTTCAGCACAAGATTG+CGG | - | chr4_1:35944104-35944123 | None:intergenic | 35.0% | |
| !!! | GATTTCTGGGGTTTTGATTT+TGG | + | chr4_1:35944174-35944193 | Msa0545550:intron | 35.0% |
| !!! | TGGGGTTTTGATTTTGGTTT+TGG | + | chr4_1:35944180-35944199 | Msa0545550:intron | 35.0% |
| GATAATAGGATGATTCAGTG+AGG | + | chr4_1:35944373-35944392 | Msa0545550:intron | 35.0% | |
| ACATGTTCATGTGCTAATTG+TGG | + | chr4_1:35944545-35944564 | Msa0545550:intron | 35.0% | |
| CAGTACCATATTGTAAAGCA+TGG | - | chr4_1:35945402-35945421 | None:intergenic | 35.0% | |
| CATGCTTTACAATATGGTAC+TGG | + | chr4_1:35945400-35945419 | Msa0545550:intron | 35.0% | |
| TTGAGCCATTAAACGTCATT+TGG | - | chr4_1:35945447-35945466 | None:intergenic | 35.0% | |
| TAAGACCAAGAATAGGTGAA+GGG | - | chr4_1:35945632-35945651 | None:intergenic | 35.0% | |
| ATAAGACCAAGAATAGGTGA+AGG | - | chr4_1:35945633-35945652 | None:intergenic | 35.0% | |
| CATTCAGTTCCTAAATATGC+TGG | + | chr4_1:35945780-35945799 | Msa0545550:intron | 35.0% | |
| CATCATACAGTCCTAGTTTA+TGG | - | chr4_1:35946047-35946066 | None:intergenic | 35.0% | |
| ! | ATCTTCAAGCTCAGTTGATA+AGG | - | chr4_1:35946121-35946140 | None:intergenic | 35.0% |
| ACTTAGACCAACAACTTCAT+GGG | + | chr4_1:35946329-35946348 | Msa0545550:CDS | 35.0% | |
| GAATCTCTCTGTAGTTATCT+TGG | + | chr4_1:35946423-35946442 | Msa0545550:CDS | 35.0% | |
| TTATAAAATGGTGTCTGCTC+CGG | - | chr4_1:35946708-35946727 | None:intergenic | 35.0% | |
| !! | TTTCTGAGTATTGAAAGTGG+GGG | + | chr4_1:35946890-35946909 | Msa0545550:CDS | 35.0% |
| CAAATGTGAGTCCACATTTA+AGG | - | chr4_1:35947260-35947279 | None:intergenic | 35.0% | |
| AGTTCCAAGCTCTCAAAATT+TGG | + | chr4_1:35947533-35947552 | Msa0545550:intron | 35.0% | |
| CAAGCTCTCAAAATTTGGAA+GGG | + | chr4_1:35947538-35947557 | Msa0545550:intron | 35.0% | |
| GACAAGGATGAGAAAATGTT+CGG | - | chr4_1:35947568-35947587 | None:intergenic | 35.0% | |
| ATAGGAAGTTTCAAGAGACA+AGG | - | chr4_1:35947584-35947603 | None:intergenic | 35.0% | |
| CACATTCCATAATACAGCAT+AGG | - | chr4_1:35947602-35947621 | None:intergenic | 35.0% | |
| ! | AGGACACAACTAAAAGCATA+TGG | - | chr4_1:35947840-35947859 | None:intergenic | 35.0% |
| AATTCGGTAAGTGCATTGAA+TGG | + | chr4_1:35947894-35947913 | Msa0545550:intron | 35.0% | |
| ATTCGGTAAGTGCATTGAAT+GGG | + | chr4_1:35947895-35947914 | Msa0545550:intron | 35.0% | |
| CTTAGTAGTGTATTGCAGTA+TGG | + | chr4_1:35947968-35947987 | Msa0545550:intron | 35.0% | |
| ! | ACATTTTCATACTGTGGATC+TGG | - | chr4_1:35948004-35948023 | None:intergenic | 35.0% |
| TTTGTGTTTGAGAACAACGT+TGG | + | chr4_1:35948070-35948089 | Msa0545550:CDS | 35.0% | |
| ! | AGAACAACGTTGGATTTTCA+AGG | + | chr4_1:35948080-35948099 | Msa0545550:CDS | 35.0% |
| GAATGTGGAGTTTAGCTATT+TGG | - | chr4_1:35948276-35948295 | None:intergenic | 35.0% | |
| GGTTTCACATGATGTAAACA+CGG | + | chr4_1:35948326-35948345 | Msa0545550:intron | 35.0% | |
| GAACAAAGAGAGTTAAAGCT+TGG | - | chr4_1:35948372-35948391 | None:intergenic | 35.0% | |
| !!! | GCATCCATATTTTGTTTTCC+TGG | + | chr4_1:35948754-35948773 | Msa0545550:intron | 35.0% |
| !!! | ATTTTGTTTTCCTGGAATCG+TGG | + | chr4_1:35948762-35948781 | Msa0545550:intron | 35.0% |
| TGAATAGGAACCATATCTTG+TGG | - | chr4_1:35948927-35948946 | None:intergenic | 35.0% | |
| CAGTGATAAAGAGAAATAGG+TGG | - | chr4_1:35949232-35949251 | None:intergenic | 35.0% | |
| ! | CACCTATTTCTCTTTATCAC+TGG | + | chr4_1:35949230-35949249 | Msa0545550:intron | 35.0% |
| AAGTTGAACAAACGAAACCA+TGG | - | chr4_1:35949299-35949318 | None:intergenic | 35.0% | |
| TACATGTTCAAAGGTCCAAT+AGG | + | chr4_1:35949333-35949352 | Msa0545550:intron | 35.0% | |
| ATTCACGATACAAATCGGTA+GGG | - | chr4_1:35949446-35949465 | None:intergenic | 35.0% | |
| TATTCACGATACAAATCGGT+AGG | - | chr4_1:35949447-35949466 | None:intergenic | 35.0% | |
| TATGTTTAAGCTTCGTGACT+AGG | + | chr4_1:35949572-35949591 | Msa0545550:intron | 35.0% | |
| ATGTTTAAGCTTCGTGACTA+GGG | + | chr4_1:35949573-35949592 | Msa0545550:intron | 35.0% | |
| ATCTTGCATCAGATCGAAAT+GGG | - | chr4_1:35949840-35949859 | None:intergenic | 35.0% | |
| AAACACAAAACAAGGTTACG+TGG | - | chr4_1:35949881-35949900 | None:intergenic | 35.0% | |
| !!! | TAACCTTGTTTTGTGTTTCC+AGG | + | chr4_1:35949883-35949902 | Msa0545550:intron | 35.0% |
| AAACCTGGAAACACAAAACA+AGG | - | chr4_1:35949889-35949908 | None:intergenic | 35.0% | |
| AGTGGAGATTAAACAAAACC+TGG | - | chr4_1:35949904-35949923 | None:intergenic | 35.0% | |
| AGTCATAGTTCACAGTTTAG+TGG | - | chr4_1:35949922-35949941 | None:intergenic | 35.0% | |
| AATATTTCGGCACATTCCTA+AGG | + | chr4_1:35950027-35950046 | Msa0545550:intron | 35.0% | |
| ! | TGGTCTGTGAAAAATGCTTT+TGG | + | chr4_1:35950315-35950334 | Msa0545550:intron | 35.0% |
| AGCAAAGATAGAACAACTTC+CGG | - | chr4_1:35950600-35950619 | None:intergenic | 35.0% | |
| AACCTAAATTGTATGTCCCT+TGG | + | chr4_1:35950645-35950664 | Msa0545550:intron | 35.0% | |
| ATCCAAGGGACATACAATTT+AGG | - | chr4_1:35950650-35950669 | None:intergenic | 35.0% | |
| GGAAAACTAACATCAATCCA+AGG | - | chr4_1:35950665-35950684 | None:intergenic | 35.0% | |
| ! | GTAGACTTTTGCTTCAAGAA+TGG | + | chr4_1:35950930-35950949 | Msa0545550:CDS | 35.0% |
| TGAAGATAGATGCGATAATC+AGG | - | chr4_1:35951139-35951158 | None:intergenic | 35.0% | |
| GATCATGTCATAAAAACTGG+TGG | + | chr4_1:35951214-35951233 | Msa0545550:intron | 35.0% | |
| ATGTCATAAAAACTGGTGGA+AGG | + | chr4_1:35951218-35951237 | Msa0545550:intron | 35.0% | |
| TCGTCTTAAATTCCGACTAA+GGG | - | chr4_1:35951404-35951423 | None:intergenic | 35.0% | |
| TTCGTCTTAAATTCCGACTA+AGG | - | chr4_1:35951405-35951424 | None:intergenic | 35.0% | |
| GGAAGGAAAAAAATTGGAGA+AGG | - | chr4_1:35951805-35951824 | None:intergenic | 35.0% | |
| !! | ATTCCTTGTCAGGTTTGTTA+AGG | + | chr4_1:35951888-35951907 | Msa0545550:intron | 35.0% |
| CAGAAAGTTCTCGAAAATTG+AGG | - | chr4_1:35951990-35952009 | None:intergenic | 35.0% | |
| CACAGTTATATCTTCAAGGA+AGG | - | chr4_1:35952068-35952087 | None:intergenic | 35.0% | |
| AAATCCTTCCTCTCACAAAA+TGG | - | chr4_1:35952189-35952208 | None:intergenic | 35.0% | |
| ! | AAAAAGTACAACAAAGGGGA+GGG | - | chr4_1:35952254-35952273 | None:intergenic | 35.0% |
| ! | AAAAAAGTACAACAAAGGGG+AGG | - | chr4_1:35952255-35952274 | None:intergenic | 35.0% |
| ATTGACTAGCACTTCAAAAG+GGG | - | chr4_1:35952292-35952311 | None:intergenic | 35.0% | |
| ! | CATTGACTAGCACTTCAAAA+GGG | - | chr4_1:35952293-35952312 | None:intergenic | 35.0% |
| ! | ACATTGACTAGCACTTCAAA+AGG | - | chr4_1:35952294-35952313 | None:intergenic | 35.0% |
| AACCCTTTCTTCTGTATGTA+TGG | + | chr4_1:35952352-35952371 | Msa0545550:three_prime_UTR | 35.0% | |
| CTCCATACATACAGAAGAAA+GGG | - | chr4_1:35952357-35952376 | None:intergenic | 35.0% | |
| TCTCCATACATACAGAAGAA+AGG | - | chr4_1:35952358-35952377 | None:intergenic | 35.0% | |
| AAATTGAGTGAGTCAAGCAC+CGG | + | chr4_1:35943716-35943735 | Msa0545550:five_prime_UTR | 40.0% | |
| !! | TGATTGGTTGTTTTCGTCGA+CGG | - | chr4_1:35943925-35943944 | None:intergenic | 40.0% |
| TTTGTAGAAGAAGAGTCGTC+TGG | + | chr4_1:35944241-35944260 | Msa0545550:intron | 40.0% | |
| AGCTTGTCCTGTTTATGTTG+CGG | + | chr4_1:35944279-35944298 | Msa0545550:CDS | 40.0% | |
| ! | GTTTTGCATCTCTATAGCAC+CGG | + | chr4_1:35944395-35944414 | Msa0545550:intron | 40.0% |
| ACACCTTCGATCATAAGTAC+CGG | - | chr4_1:35944417-35944436 | None:intergenic | 40.0% | |
| ! | CATTTTCTCAAGCTTGTCGA+TGG | + | chr4_1:35944464-35944483 | Msa0545550:intron | 40.0% |
| CATGTGCTAATTGTGGTTGA+TGG | + | chr4_1:35944552-35944571 | Msa0545550:intron | 40.0% | |
| TGTCAACACTTCGGTTCATA+GGG | + | chr4_1:35944725-35944744 | Msa0545550:intron | 40.0% | |
| ACTTCGGTTCATAGGGAAAA+GGG | + | chr4_1:35944732-35944751 | Msa0545550:intron | 40.0% | |
| CACCAAATGACAAATCGTTC+GGG | - | chr4_1:35944840-35944859 | None:intergenic | 40.0% | |
| CCACCAAATGACAAATCGTT+CGG | - | chr4_1:35944841-35944860 | None:intergenic | 40.0% | |
| ! | AACGATTTGTCATTTGGTGG+AGG | + | chr4_1:35944841-35944860 | Msa0545550:intron | 40.0% |
| ACCACTTGAGCCTAATTGTT+TGG | + | chr4_1:35944873-35944892 | Msa0545550:intron | 40.0% | |
| ACCAAACAATTAGGCTCAAG+TGG | - | chr4_1:35944877-35944896 | None:intergenic | 40.0% | |
| TCTAGACAAACCGTTGTGTT+CGG | + | chr4_1:35945055-35945074 | Msa0545550:intron | 40.0% | |
| TGCTAGATGCTAGTCCTAAT+GGG | + | chr4_1:35945193-35945212 | Msa0545550:intron | 40.0% | |
| ! | TATGGCTTGTACAGTTGACA+AGG | - | chr4_1:35945527-35945546 | None:intergenic | 40.0% |
| AAGACCAAGAATAGGTGAAG+GGG | - | chr4_1:35945631-35945650 | None:intergenic | 40.0% | |
| ! | ACTCACTAAAAGTGCATTGC+TGG | + | chr4_1:35945884-35945903 | Msa0545550:CDS | 40.0% |
| AGCAGTGATATACCTTATGC+AGG | - | chr4_1:35945955-35945974 | None:intergenic | 40.0% | |
| !!! | TTGCTCCTGGTTCACTTTTT+GGG | + | chr4_1:35946007-35946026 | Msa0545550:CDS | 40.0% |
| GCTACATTCAGCCATAAACT+AGG | + | chr4_1:35946033-35946052 | Msa0545550:CDS | 40.0% | |
| CTAGGACTGTATGATGTTCA+AGG | + | chr4_1:35946051-35946070 | Msa0545550:CDS | 40.0% | |
| ! | AAATGTTTTCATCCCTCCAG+AGG | + | chr4_1:35946092-35946111 | Msa0545550:CDS | 40.0% |
| ! | AATGTTTTCATCCCTCCAGA+GGG | + | chr4_1:35946093-35946112 | Msa0545550:CDS | 40.0% |
| CATGCCTTTGTTACAGTTTC+TGG | + | chr4_1:35946143-35946162 | Msa0545550:CDS | 40.0% | |
| ACAGTCTGATGTTAAAGCAC+AGG | + | chr4_1:35946211-35946230 | Msa0545550:intron | 40.0% | |
| CAGTCTGATGTTAAAGCACA+GGG | + | chr4_1:35946212-35946231 | Msa0545550:intron | 40.0% | |
| ATTGAAGGTGGACACTTGTA+AGG | + | chr4_1:35946281-35946300 | Msa0545550:intron | 40.0% | |
| ! | TTTCGAGTGCAGATGCAATA+CGG | - | chr4_1:35946308-35946327 | None:intergenic | 40.0% |
| CACTTAGACCAACAACTTCA+TGG | + | chr4_1:35946328-35946347 | Msa0545550:CDS | 40.0% | |
| !!! | TATGGGAGCACTTTTGCATT+AGG | + | chr4_1:35946453-35946472 | Msa0545550:CDS | 40.0% |
| AGAGTCTTTGCATTCTTGTC+TGG | + | chr4_1:35946591-35946610 | Msa0545550:CDS | 40.0% | |
| AATTGTCCAGCTCCATAATC+AGG | - | chr4_1:35946621-35946640 | None:intergenic | 40.0% | |
| TGATTATGGAGCTGGACAAT+TGG | + | chr4_1:35946620-35946639 | Msa0545550:CDS | 40.0% | |
| TGAGCAATATGCCAGCAAAA+GGG | + | chr4_1:35946659-35946678 | Msa0545550:CDS | 40.0% | |
| TATAAAATGGTGTCTGCTCC+GGG | - | chr4_1:35946707-35946726 | None:intergenic | 40.0% | |
| AGAACTGACATGTGTTTCAC+AGG | + | chr4_1:35946787-35946806 | Msa0545550:intron | 40.0% | |
| ! | CATGCGTAGACATGTTTTAC+CGG | + | chr4_1:35946987-35947006 | Msa0545550:intron | 40.0% |
| CACATCCAATCAGCAAGTAT+TGG | - | chr4_1:35947059-35947078 | None:intergenic | 40.0% | |
| CTGAGATTGTATCGAAGACA+TGG | - | chr4_1:35947085-35947104 | None:intergenic | 40.0% | |
| TTCGATACAATCTCAGCTTG+AGG | + | chr4_1:35947089-35947108 | Msa0545550:intron | 40.0% | |
| CTGCACAATAACTATCCGAA+GGG | - | chr4_1:35947391-35947410 | None:intergenic | 40.0% | |
| ACTGCACAATAACTATCCGA+AGG | - | chr4_1:35947392-35947411 | None:intergenic | 40.0% | |
| !! | CCTTCCAAATTTTGAGAGCT+TGG | - | chr4_1:35947540-35947559 | None:intergenic | 40.0% |
| CCAAGCTCTCAAAATTTGGA+AGG | + | chr4_1:35947537-35947556 | Msa0545550:intron | 40.0% | |
| TGTGATGTCTTTCTCTTTGC+AGG | + | chr4_1:35947796-35947815 | Msa0545550:intron | 40.0% | |
| ACCTCAACTGAATTTAAGCC+TGG | + | chr4_1:35947870-35947889 | Msa0545550:CDS | 40.0% | |
| TCCAGGCTTAAATTCAGTTG+AGG | - | chr4_1:35947874-35947893 | None:intergenic | 40.0% | |
| AATGCACTTACCGAATTTCC+AGG | - | chr4_1:35947891-35947910 | None:intergenic | 40.0% | |
| ! | TCTTCTGCTGAATTCTAGAG+TGG | + | chr4_1:35948409-35948428 | Msa0545550:intron | 40.0% |
| ACCCTAGAGTGACAAAAGAT+TGG | + | chr4_1:35948731-35948750 | Msa0545550:intron | 40.0% | |
| ! | CCCAATCTTTTGTCACTCTA+GGG | - | chr4_1:35948735-35948754 | None:intergenic | 40.0% |
| CCCTAGAGTGACAAAAGATT+GGG | + | chr4_1:35948732-35948751 | Msa0545550:intron | 40.0% | |
| ! | TGAAATGCAATCTGGAGTGT+AGG | - | chr4_1:35949014-35949033 | None:intergenic | 40.0% |
| !! | CTGAGTACTGAAATGCAATC+TGG | - | chr4_1:35949022-35949041 | None:intergenic | 40.0% |
| GCCCAGTGATAAAGAGAAAT+AGG | - | chr4_1:35949235-35949254 | None:intergenic | 40.0% | |
| AACAAACGAAACCATGGTCA+AGG | - | chr4_1:35949293-35949312 | None:intergenic | 40.0% | |
| GAGTGAAATCGCAAAATCGT+GGG | - | chr4_1:35949421-35949440 | None:intergenic | 40.0% | |
| TGAGTGAAATCGCAAAATCG+TGG | - | chr4_1:35949422-35949441 | None:intergenic | 40.0% | |
| TTCACGATACAAATCGGTAG+GGG | - | chr4_1:35949445-35949464 | None:intergenic | 40.0% | |
| ACAGTGATTTGACTCAACTC+AGG | - | chr4_1:35949474-35949493 | None:intergenic | 40.0% | |
| GTGAAATCGTGCAATTCCAT+AGG | + | chr4_1:35949521-35949540 | Msa0545550:intron | 40.0% | |
| AACATAAACGACTCAAAGCC+TGG | - | chr4_1:35949558-35949577 | None:intergenic | 40.0% | |
| AAGATTGCAACCAAGATCGA+AGG | - | chr4_1:35949805-35949824 | None:intergenic | 40.0% | |
| GATCTTGCATCAGATCGAAA+TGG | - | chr4_1:35949841-35949860 | None:intergenic | 40.0% | |
| AGAAGAGAATGCTGTCATTG+TGG | - | chr4_1:35950780-35950799 | None:intergenic | 40.0% | |
| CATCATTGTACTGAGCTACA+AGG | - | chr4_1:35950964-35950983 | None:intergenic | 40.0% | |
| TTCGAAGGAGAGCAAAGATT+AGG | - | chr4_1:35951081-35951100 | None:intergenic | 40.0% | |
| ! | ATGCAAAGCTTCAGAAGCAT+TGG | + | chr4_1:35951498-35951517 | Msa0545550:intron | 40.0% |
| GTGGCATATGATGTCAATAC+TGG | - | chr4_1:35951622-35951641 | None:intergenic | 40.0% | |
| ATATGCTTGTTTGTCTGGAG+TGG | - | chr4_1:35951641-35951660 | None:intergenic | 40.0% | |
| GAAAAATATTGGACTGCCAC+TGG | - | chr4_1:35951698-35951717 | None:intergenic | 40.0% | |
| ! | TGGCAGTCCAATATTTTTCC+TGG | + | chr4_1:35951699-35951718 | Msa0545550:CDS | 40.0% |
| TCAGAATTGTGAATGCATCC+AGG | - | chr4_1:35951720-35951739 | None:intergenic | 40.0% | |
| AGTCCTTAACAAACCTGACA+AGG | - | chr4_1:35951894-35951913 | None:intergenic | 40.0% | |
| ! | CATTTTTATTCAAGGAGGGC+AGG | + | chr4_1:35951958-35951977 | Msa0545550:CDS | 40.0% |
| GAACTTTCTGATTGAAGAGC+AGG | + | chr4_1:35952000-35952019 | Msa0545550:CDS | 40.0% | |
| ATTGACATTGCACCCCAAAA+GGG | - | chr4_1:35952119-35952138 | None:intergenic | 40.0% | |
| AATTGACATTGCACCCCAAA+AGG | - | chr4_1:35952120-35952139 | None:intergenic | 40.0% | |
| ! | AAAAGTACAACAAAGGGGAG+GGG | - | chr4_1:35952253-35952272 | None:intergenic | 40.0% |
| TTGACTAGCACTTCAAAAGG+GGG | - | chr4_1:35952291-35952310 | None:intergenic | 40.0% | |
| ! | GAGTTAGACTCAGCTTGTTC+CGG | - | chr4_1:35943738-35943757 | None:intergenic | 45.0% |
| !!! | ATGGTTTTTGGTCTGATCGG+TGG | - | chr4_1:35943807-35943826 | None:intergenic | 45.0% |
| ACCGATCAGACCAAAAACCA+TGG | + | chr4_1:35943806-35943825 | Msa0545550:exon | 45.0% | |
| !!! | GCCATGGTTTTTGGTCTGAT+CGG | - | chr4_1:35943810-35943829 | None:intergenic | 45.0% |
| GATCAGACCAAAAACCATGG+CGG | + | chr4_1:35943809-35943828 | Msa0545550:exon | 45.0% | |
| CGAAGTTTCCGGCCTATTAT+GGG | + | chr4_1:35943875-35943894 | Msa0545550:CDS | 45.0% | |
| GAAGTTTCCGGCCTATTATG+GGG | + | chr4_1:35943876-35943895 | Msa0545550:CDS | 45.0% | |
| CGACGAAAACAACCAATCAC+CGG | + | chr4_1:35943926-35943945 | Msa0545550:CDS | 45.0% | |
| AACAACCAATCACCGGCATA+CGG | + | chr4_1:35943933-35943952 | Msa0545550:CDS | 45.0% | |
| ! | CCATTGTTCGAGTTCACAGT+AGG | - | chr4_1:35944012-35944031 | None:intergenic | 45.0% |
| CCTACTGTGAACTCGAACAA+TGG | + | chr4_1:35944009-35944028 | Msa0545550:CDS | 45.0% | |
| TGAACTCGAACAATGGTCGT+GGG | + | chr4_1:35944016-35944035 | Msa0545550:CDS | 45.0% | |
| TGTAGATCTTGAATTGCCGC+AGG | + | chr4_1:35944133-35944152 | Msa0545550:CDS | 45.0% | |
| GTAGATCTTGAATTGCCGCA+GGG | + | chr4_1:35944134-35944153 | Msa0545550:CDS | 45.0% | |
| GGTTAAGGGTTGCGATTTCT+GGG | + | chr4_1:35944161-35944180 | Msa0545550:intron | 45.0% | |
| GTTAAGGGTTGCGATTTCTG+GGG | + | chr4_1:35944162-35944181 | Msa0545550:intron | 45.0% | |
| TTGTCCTGTTTATGTTGCGG+CGG | + | chr4_1:35944282-35944301 | Msa0545550:CDS | 45.0% | |
| !! | GATAGTTGGATGGGTTAGTG+AGG | + | chr4_1:35944586-35944605 | Msa0545550:intron | 45.0% |
| GTGTCAACACTTCGGTTCAT+AGG | + | chr4_1:35944724-35944743 | Msa0545550:intron | 45.0% | |
| CACTTCGGTTCATAGGGAAA+AGG | + | chr4_1:35944731-35944750 | Msa0545550:intron | 45.0% | |
| TTCCTGGGTGGAACAATTCT+TGG | - | chr4_1:35944802-35944821 | None:intergenic | 45.0% | |
| TTCCACCCAGGAATCAAACT+CGG | + | chr4_1:35944809-35944828 | Msa0545550:intron | 45.0% | |
| AGAACCCGAGTTTGATTCCT+GGG | - | chr4_1:35944817-35944836 | None:intergenic | 45.0% | |
| CTCCCGAACGATTTGTCATT+TGG | + | chr4_1:35944835-35944854 | Msa0545550:intron | 45.0% | |
| ! | CCGAACGATTTGTCATTTGG+TGG | + | chr4_1:35944838-35944857 | Msa0545550:intron | 45.0% |
| !! | CTATCTGACAGCACCGATTA+AGG | - | chr4_1:35944921-35944940 | None:intergenic | 45.0% |
| !! | TAATCGGTGCTGTCAGATAG+TGG | + | chr4_1:35944921-35944940 | Msa0545550:intron | 45.0% |
| !! | TGGTTTGGTGGTGTAGGATT+CGG | + | chr4_1:35944963-35944982 | Msa0545550:intron | 45.0% |
| CTTGATAGGAACACGGTTTG+AGG | - | chr4_1:35944990-35945009 | None:intergenic | 45.0% | |
| CTCAAACCGTGTTCCTATCA+AGG | + | chr4_1:35944988-35945007 | Msa0545550:intron | 45.0% | |
| CTGAGACCTTGATAGGAACA+CGG | - | chr4_1:35944997-35945016 | None:intergenic | 45.0% | |
| ATCGAACCTGAGACCTTGAT+AGG | - | chr4_1:35945004-35945023 | None:intergenic | 45.0% | |
| TAGGAATTGTTAGCGCATGG+AGG | - | chr4_1:35945028-35945047 | None:intergenic | 45.0% | |
| TCCATGCGCTAACAATTCCT+AGG | + | chr4_1:35945027-35945046 | Msa0545550:intron | 45.0% | |
| ACCTAGGAATTGTTAGCGCA+TGG | - | chr4_1:35945031-35945050 | None:intergenic | 45.0% | |
| TGCGCTAACAATTCCTAGGT+TGG | + | chr4_1:35945031-35945050 | Msa0545550:intron | 45.0% | |
| GCGCTAACAATTCCTAGGTT+GGG | + | chr4_1:35945032-35945051 | Msa0545550:intron | 45.0% | |
| AGAGCAGTGTTGTCAATCGT+GGG | - | chr4_1:35945084-35945103 | None:intergenic | 45.0% | |
| GTGCTAGATGCTAGTCCTAA+TGG | + | chr4_1:35945192-35945211 | Msa0545550:intron | 45.0% | |
| ! | TGGTACTGGACGTCAGATTA+TGG | + | chr4_1:35945414-35945433 | Msa0545550:intron | 45.0% |
| ! | GGTACTGGACGTCAGATTAT+GGG | + | chr4_1:35945415-35945434 | Msa0545550:intron | 45.0% |
| AGACCAAGAATAGGTGAAGG+GGG | - | chr4_1:35945630-35945649 | None:intergenic | 45.0% | |
| AGTGAGTTCCAGAAACTCCT+CGG | - | chr4_1:35945871-35945890 | None:intergenic | 45.0% | |
| ! | TTTTTCACAGCTCTTGCTCC+TGG | + | chr4_1:35945994-35946013 | Msa0545550:intron | 45.0% |
| !! | CTTGCTCCTGGTTCACTTTT+TGG | + | chr4_1:35946006-35946025 | Msa0545550:CDS | 45.0% |
| TTGATAAGGTTCCCTCTGGA+GGG | - | chr4_1:35946107-35946126 | None:intergenic | 45.0% | |
| !! | TCAGTTGATAAGGTTCCCTC+TGG | - | chr4_1:35946111-35946130 | None:intergenic | 45.0% |
| GGAGCCAGAAACTGTAACAA+AGG | - | chr4_1:35946150-35946169 | None:intergenic | 45.0% | |
| AGCACAGGGATTGCAATATC+TGG | + | chr4_1:35946226-35946245 | Msa0545550:intron | 45.0% | |
| GTTCTCTCCCATGAAGTTGT+TGG | - | chr4_1:35946339-35946358 | None:intergenic | 45.0% | |
| AACTTCATGGGAGAGAACTC+CGG | + | chr4_1:35946341-35946360 | Msa0545550:CDS | 45.0% | |
| TTGTCTGGTCCTCCTGATTA+TGG | + | chr4_1:35946606-35946625 | Msa0545550:CDS | 45.0% | |
| CAATTGGACACAAGGCGATA+TGG | + | chr4_1:35946636-35946655 | Msa0545550:CDS | 45.0% | |
| GTGAGCAATATGCCAGCAAA+AGG | + | chr4_1:35946658-35946677 | Msa0545550:CDS | 45.0% | |
| CTGAGGCAAAGTTGAATCCT+CGG | - | chr4_1:35946939-35946958 | None:intergenic | 45.0% | |
| GATGAGACTTACATGTCCTG+AGG | - | chr4_1:35946956-35946975 | None:intergenic | 45.0% | |
| AGACCTAAACAGGTCTGAAC+CGG | + | chr4_1:35947364-35947383 | Msa0545550:intron | 45.0% | |
| CAATAACTATCCGAAGGGTC+CGG | - | chr4_1:35947386-35947405 | None:intergenic | 45.0% | |
| GAACTTCTGTTGAAACGCTG+TGG | + | chr4_1:35947639-35947658 | Msa0545550:intron | 45.0% | |
| CAGTTGAGGTTCTTAATCGC+AGG | - | chr4_1:35947860-35947879 | None:intergenic | 45.0% | |
| GGTAAGTGCATTGAATGGGA+TGG | + | chr4_1:35947899-35947918 | Msa0545550:intron | 45.0% | |
| ! | GCCCAATCTTTTGTCACTCT+AGG | - | chr4_1:35948736-35948755 | None:intergenic | 45.0% |
| ! | TTGTTTTCCTGGAATCGTGG+TGG | + | chr4_1:35948765-35948784 | Msa0545550:intron | 45.0% |
| AGGAGCTTTCCAATTCAGGA+GGG | + | chr4_1:35949057-35949076 | Msa0545550:CDS | 45.0% | |
| CACACACACTCTCTCTTGTA+TGG | + | chr4_1:35949105-35949124 | Msa0545550:intron | 45.0% | |
| ! | TGTTGCTTGTTCCTTGACCA+TGG | + | chr4_1:35949279-35949298 | Msa0545550:intron | 45.0% |
| ! | TCGCAAAATCGTGGGTTATC+AGG | - | chr4_1:35949413-35949432 | None:intergenic | 45.0% |
| CCTGGATCATGAGAATCCTA+TGG | - | chr4_1:35949540-35949559 | None:intergenic | 45.0% | |
| CCATAGGATTCTCATGATCC+AGG | + | chr4_1:35949537-35949556 | Msa0545550:intron | 45.0% | |
| !! | CTTCGTGACTAGGGTGTTTT+AGG | + | chr4_1:35949582-35949601 | Msa0545550:intron | 45.0% |
| CTGATGCAAGATCTCGATTC+TGG | + | chr4_1:35949848-35949867 | Msa0545550:intron | 45.0% | |
| AACCCAACAAAAAGACCAGC+AGG | - | chr4_1:35950165-35950184 | None:intergenic | 45.0% | |
| ACTTTACGACAGCTGTGATC+CGG | + | chr4_1:35950578-35950597 | Msa0545550:CDS | 45.0% | |
| TCTATCTTTGCTCGTGCACA+AGG | + | chr4_1:35950608-35950627 | Msa0545550:CDS | 45.0% | |
| GCAGGTTATACTTGCCTCTT+TGG | + | chr4_1:35950889-35950908 | Msa0545550:intron | 45.0% | |
| GGTTATACTTGCCTCTTTGG+AGG | + | chr4_1:35950892-35950911 | Msa0545550:intron | 45.0% | |
| ! | ATACTTGCCTCTTTGGAGGA+AGG | + | chr4_1:35950896-35950915 | Msa0545550:CDS | 45.0% |
| CAGTTGAGGACATTGAGAGA+AGG | - | chr4_1:35951044-35951063 | None:intergenic | 45.0% | |
| CTTCGTGAAAGCGAAGAAGA+GGG | - | chr4_1:35951105-35951124 | None:intergenic | 45.0% | |
| TCTTCGTGAAAGCGAAGAAG+AGG | - | chr4_1:35951106-35951125 | None:intergenic | 45.0% | |
| CTTCTTCGCTTTCACGAAGA+AGG | + | chr4_1:35951106-35951125 | Msa0545550:CDS | 45.0% | |
| TGGATACACAGCACGATGAA+GGG | - | chr4_1:35951602-35951621 | None:intergenic | 45.0% | |
| CGAGGATATGCTTGTTTGTC+TGG | - | chr4_1:35951646-35951665 | None:intergenic | 45.0% | |
| TGGAGAAGGCTTACAATCGT+GGG | - | chr4_1:35951791-35951810 | None:intergenic | 45.0% | |
| TTGGAGAAGGCTTACAATCG+TGG | - | chr4_1:35951792-35951811 | None:intergenic | 45.0% | |
| TAATCCAGTGCAGACTACAG+AGG | - | chr4_1:35951826-35951845 | None:intergenic | 45.0% | |
| ATTGAAGAGCAGGACGTTGA+TGG | + | chr4_1:35952010-35952029 | Msa0545550:CDS | 45.0% | |
| AAGCGGTCTTACAAGTGTGA+TGG | + | chr4_1:35952033-35952052 | Msa0545550:CDS | 45.0% | |
| AGCGGTCTTACAAGTGTGAT+GGG | + | chr4_1:35952034-35952053 | Msa0545550:CDS | 45.0% | |
| ! | GCTTCCATTTTGTGAGAGGA+AGG | + | chr4_1:35952182-35952201 | Msa0545550:three_prime_UTR | 45.0% |
| AATGCACATTCGAGTCATGC+TGG | + | chr4_1:35952221-35952240 | Msa0545550:three_prime_UTR | 45.0% | |
| AAAGTACAACAAAGGGGAGG+GGG | - | chr4_1:35952252-35952271 | None:intergenic | 45.0% | |
| !! | ATTTAACATTATAATTTATA+AGG | + | chr4_1:35945121-35945140 | Msa0545550:intron | 5.0% |
| GCGAAGTTTCCGGCCTATTA+TGG | + | chr4_1:35943874-35943893 | Msa0545550:CDS | 50.0% | |
| GGTTACTCCCCATAATAGGC+CGG | - | chr4_1:35943886-35943905 | None:intergenic | 50.0% | |
| CGACGGTTACTCCCCATAAT+AGG | - | chr4_1:35943890-35943909 | None:intergenic | 50.0% | |
| !! | TTGGTTGTTTTCGTCGACGG+CGG | - | chr4_1:35943922-35943941 | None:intergenic | 50.0% |
| GTGAACTCGAACAATGGTCG+TGG | + | chr4_1:35944015-35944034 | Msa0545550:CDS | 50.0% | |
| GAACTCGAACAATGGTCGTG+GGG | + | chr4_1:35944017-35944036 | Msa0545550:CDS | 50.0% | |
| TCTCTCTGCGGGAATCTCAA+TGG | + | chr4_1:35944044-35944063 | Msa0545550:CDS | 50.0% | |
| TCTTGAATTGCCGCAGGGTA+AGG | + | chr4_1:35944139-35944158 | Msa0545550:intron | 50.0% | |
| CTTGAATTGCCGCAGGGTAA+GGG | + | chr4_1:35944140-35944159 | Msa0545550:intron | 50.0% | |
| AACCCTTAACCCTTACCCTG+CGG | - | chr4_1:35944152-35944171 | None:intergenic | 50.0% | |
| GGGTTAAGGGTTGCGATTTC+TGG | + | chr4_1:35944160-35944179 | Msa0545550:intron | 50.0% | |
| TCAACCGCCGCAACATAAAC+AGG | - | chr4_1:35944289-35944308 | None:intergenic | 50.0% | |
| ! | GCACCGGTACTTATGATCGA+AGG | + | chr4_1:35944411-35944430 | Msa0545550:intron | 50.0% |
| TTCATAGGGAAAAGGGTCCC+TGG | + | chr4_1:35944739-35944758 | Msa0545550:intron | 50.0% | |
| GAAAAGGGTCCCTGGTAATC+TGG | + | chr4_1:35944747-35944766 | Msa0545550:intron | 50.0% | |
| ! | GTCCCTGGTAATCTGGAGTT+CGG | + | chr4_1:35944754-35944773 | Msa0545550:intron | 50.0% |
| GACCGAACTCCAGATTACCA+GGG | - | chr4_1:35944759-35944778 | None:intergenic | 50.0% | |
| ! | TAATCTGGAGTTCGGTCGTG+AGG | + | chr4_1:35944762-35944781 | Msa0545550:intron | 50.0% |
| TCCACCCAGGAATCAAACTC+GGG | + | chr4_1:35944810-35944829 | Msa0545550:intron | 50.0% | |
| GAGAACCCGAGTTTGATTCC+TGG | - | chr4_1:35944818-35944837 | None:intergenic | 50.0% | |
| ACACCACCAAACCAACCCTA+GGG | - | chr4_1:35944957-35944976 | None:intergenic | 50.0% | |
| TACACCACCAAACCAACCCT+AGG | - | chr4_1:35944958-35944977 | None:intergenic | 50.0% | |
| !! | TAGGGTTGGTTTGGTGGTGT+AGG | + | chr4_1:35944957-35944976 | Msa0545550:intron | 50.0% |
| CGTGTTCCTATCAAGGTCTC+AGG | + | chr4_1:35944995-35945014 | Msa0545550:intron | 50.0% | |
| GGTTTGTCTAGACCCAACCT+AGG | - | chr4_1:35945047-35945066 | None:intergenic | 50.0% | |
| GAGAGCAGTGTTGTCAATCG+TGG | - | chr4_1:35945085-35945104 | None:intergenic | 50.0% | |
| GAATAGGTGAAGGGGGGATA+TGG | - | chr4_1:35945623-35945642 | None:intergenic | 50.0% | |
| ATCCCCCCTTCACCTATTCT+TGG | + | chr4_1:35945624-35945643 | Msa0545550:intron | 50.0% | |
| GACCAAGAATAGGTGAAGGG+GGG | - | chr4_1:35945629-35945648 | None:intergenic | 50.0% | |
| ACGTTTAACTGCAGCTTCCG+AGG | + | chr4_1:35945851-35945870 | Msa0545550:intron | 50.0% | |
| AAGTGCATTGCTGGCAGCTT+TGG | + | chr4_1:35945893-35945912 | Msa0545550:CDS | 50.0% | |
| GCAAGCCCAAAAAGTGAACC+AGG | - | chr4_1:35946015-35946034 | None:intergenic | 50.0% | |
| ! | GTTGATAAGGTTCCCTCTGG+AGG | - | chr4_1:35946108-35946127 | None:intergenic | 50.0% |
| ACTTCATGGGAGAGAACTCC+GGG | + | chr4_1:35946342-35946361 | Msa0545550:CDS | 50.0% | |
| GGAATGGATGGTGTTCTGCT+AGG | + | chr4_1:35946375-35946394 | Msa0545550:CDS | 50.0% | |
| ATGGATGGTGTTCTGCTAGG+TGG | + | chr4_1:35946378-35946397 | Msa0545550:CDS | 50.0% | |
| TGGATGGTGTTCTGCTAGGT+GGG | + | chr4_1:35946379-35946398 | Msa0545550:CDS | 50.0% | |
| TGTCCAGCTCCATAATCAGG+AGG | - | chr4_1:35946618-35946637 | None:intergenic | 50.0% | |
| GAGCTGGACAATTGGACACA+AGG | + | chr4_1:35946628-35946647 | Msa0545550:CDS | 50.0% | |
| GCAATATGCCAGCAAAAGGG+AGG | + | chr4_1:35946662-35946681 | Msa0545550:CDS | 50.0% | |
| ! | ATCTGCATCCTCCCTTTTGC+TGG | - | chr4_1:35946673-35946692 | None:intergenic | 50.0% |
| TGCAGATCGTGCTTTACTCC+CGG | + | chr4_1:35946686-35946705 | Msa0545550:CDS | 50.0% | |
| CGAGGATTCAACTTTGCCTC+AGG | + | chr4_1:35946937-35946956 | Msa0545550:CDS | 50.0% | |
| !! | GCAGGTATCGAATGCTGAGT+AGG | + | chr4_1:35947814-35947833 | Msa0545550:intron | 50.0% |
| TATGGGGTGCATTCAGAAGC+TGG | + | chr4_1:35948186-35948205 | Msa0545550:intron | 50.0% | |
| !! | ACTCTAGGGTTTCGCTCACA+GGG | - | chr4_1:35948721-35948740 | None:intergenic | 50.0% |
| CTCAGTTGTAGTTCCTCCTC+AGG | + | chr4_1:35949037-35949056 | Msa0545550:CDS | 50.0% | |
| GAATTGGAAAGCTCCTGAGG+AGG | - | chr4_1:35949053-35949072 | None:intergenic | 50.0% | |
| CCTGAATTGGAAAGCTCCTG+AGG | - | chr4_1:35949056-35949075 | None:intergenic | 50.0% | |
| CCTCAGGAGCTTTCCAATTC+AGG | + | chr4_1:35949053-35949072 | Msa0545550:CDS | 50.0% | |
| CAGGAGCTTTCCAATTCAGG+AGG | + | chr4_1:35949056-35949075 | Msa0545550:CDS | 50.0% | |
| GGAGCTTTCCAATTCAGGAG+GGG | + | chr4_1:35949058-35949077 | Msa0545550:CDS | 50.0% | |
| TGTAGAGACCCCTCCTGAAT+TGG | - | chr4_1:35949069-35949088 | None:intergenic | 50.0% | |
| CGGGTAGAATCCTTCGATCT+TGG | + | chr4_1:35949792-35949811 | Msa0545550:intron | 50.0% | |
| GTTTCTTTCATTCCGCCTGC+TGG | + | chr4_1:35950147-35950166 | Msa0545550:intron | 50.0% | |
| CCAACAAAAAGACCAGCAGG+CGG | - | chr4_1:35950162-35950181 | None:intergenic | 50.0% | |
| !!! | CGCCTGCTGGTCTTTTTGTT+GGG | + | chr4_1:35950160-35950179 | Msa0545550:intron | 50.0% |
| CCAAGCATCATTCCCTTCAG+CGG | + | chr4_1:35950505-35950524 | Msa0545550:CDS | 50.0% | |
| AGGATCCGAACAGTGCAGTT+TGG | + | chr4_1:35950534-35950553 | Msa0545550:CDS | 50.0% | |
| CAACGCCAAACTGCACTGTT+CGG | - | chr4_1:35950542-35950561 | None:intergenic | 50.0% | |
| TCGAACTCCTTCCTCCAAAG+AGG | - | chr4_1:35950906-35950925 | None:intergenic | 50.0% | |
| TTTGGAGGAAGGAGTTCGAG+AGG | + | chr4_1:35950907-35950926 | Msa0545550:CDS | 50.0% | |
| TTGGAGGAAGGAGTTCGAGA+GGG | + | chr4_1:35950908-35950927 | Msa0545550:CDS | 50.0% | |
| AGGAGAGCAAAGATTAGGCG+CGG | - | chr4_1:35951076-35951095 | None:intergenic | 50.0% | |
| AGCGAAGAAGAGGGTTTCGA+AGG | - | chr4_1:35951096-35951115 | None:intergenic | 50.0% | |
| ACAGCACGATGAAGGGAACT+CGG | - | chr4_1:35951595-35951614 | None:intergenic | 50.0% | |
| CTGGATACACAGCACGATGA+AGG | - | chr4_1:35951603-35951622 | None:intergenic | 50.0% | |
| ATGCAGCACGACTCAAGGAA+TGG | - | chr4_1:35951669-35951688 | None:intergenic | 50.0% | |
| AAGCAATGCAGCACGACTCA+AGG | - | chr4_1:35951674-35951693 | None:intergenic | 50.0% | |
| !! | GTGGCGGAAAAGGAAGTGTT+GGG | - | chr4_1:35951768-35951787 | None:intergenic | 50.0% |
| GGAGAAGGCTTACAATCGTG+GGG | - | chr4_1:35951790-35951809 | None:intergenic | 50.0% | |
| ! | GGGAGCTTCCATTTTGTGAG+AGG | + | chr4_1:35952178-35952197 | Msa0545550:three_prime_UTR | 50.0% |
| GGTGAACGTTACACGCACAC+TGG | - | chr4_1:35943786-35943805 | None:intergenic | 55.0% | |
| ! | GCTCTCACCGCCATGGTTTT+TGG | - | chr4_1:35943819-35943838 | None:intergenic | 55.0% |
| TGGATCCGTATGCCGGTGAT+TGG | - | chr4_1:35943941-35943960 | None:intergenic | 55.0% | |
| TCGTGGGGTTGTTCTCTCTG+CGG | + | chr4_1:35944032-35944051 | Msa0545550:CDS | 55.0% | |
| TTGCCGCAGGGTAAGGGTTA+AGG | + | chr4_1:35944146-35944165 | Msa0545550:intron | 55.0% | |
| TGCCGCAGGGTAAGGGTTAA+GGG | + | chr4_1:35944147-35944166 | Msa0545550:intron | 55.0% | |
| CGACCGAACTCCAGATTACC+AGG | - | chr4_1:35944760-35944779 | None:intergenic | 55.0% | |
| CGCCAAGAATTGTTCCACCC+AGG | + | chr4_1:35944797-35944816 | Msa0545550:intron | 55.0% | |
| ACCCGAGTTTGATTCCTGGG+TGG | - | chr4_1:35944814-35944833 | None:intergenic | 55.0% | |
| TAGTGGCAGTAGAACCCCCT+AGG | + | chr4_1:35944938-35944957 | Msa0545550:intron | 55.0% | |
| AGTGGCAGTAGAACCCCCTA+GGG | + | chr4_1:35944939-35944958 | Msa0545550:intron | 55.0% | |
| !! | AGAACCCCCTAGGGTTGGTT+TGG | + | chr4_1:35944948-35944967 | Msa0545550:intron | 55.0% |
| ACCACCAAACCAACCCTAGG+GGG | - | chr4_1:35944955-35944974 | None:intergenic | 55.0% | |
| CACCACCAAACCAACCCTAG+GGG | - | chr4_1:35944956-35944975 | None:intergenic | 55.0% | |
| AGGTGAAGGGGGGATATGGA+TGG | - | chr4_1:35945619-35945638 | None:intergenic | 55.0% | |
| TGCAGCTTCCGAGGAGTTTC+TGG | + | chr4_1:35945860-35945879 | Msa0545550:intron | 55.0% | |
| !! | GCATTGCTGGCAGCTTTGGA+AGG | + | chr4_1:35945897-35945916 | Msa0545550:CDS | 55.0% |
| TCCATTCCTTGACCTGCTCC+CGG | - | chr4_1:35946363-35946382 | None:intergenic | 55.0% | |
| GGAGCAGGTCAAGGAATGGA+TGG | + | chr4_1:35946363-35946382 | Msa0545550:CDS | 55.0% | |
| GGTCCTCCTGATTATGGAGC+TGG | + | chr4_1:35946612-35946631 | Msa0545550:CDS | 55.0% | |
| ! | GCAGCTGTTGCTGTTCAAGC+AGG | + | chr4_1:35946809-35946828 | Msa0545550:CDS | 55.0% |
| GGTCCGGTTCAGACCTGTTT+AGG | - | chr4_1:35947370-35947389 | None:intergenic | 55.0% | |
| ! | TCTAGGGTTTCGCTCACAGG+GGG | - | chr4_1:35948719-35948738 | None:intergenic | 55.0% |
| !! | CTCTAGGGTTTCGCTCACAG+GGG | - | chr4_1:35948720-35948739 | None:intergenic | 55.0% |
| !! | CACTCTAGGGTTTCGCTCAC+AGG | - | chr4_1:35948722-35948741 | None:intergenic | 55.0% |
| !! | TGGAATCGTGGTGGACTGCT+GGG | + | chr4_1:35948774-35948793 | Msa0545550:intron | 55.0% |
| !!! | CCGCCTGCTGGTCTTTTTGT+TGG | + | chr4_1:35950159-35950178 | Msa0545550:intron | 55.0% |
| CCGCTGAAGGGAATGATGCT+TGG | - | chr4_1:35950508-35950527 | None:intergenic | 55.0% | |
| AGCATCATTCCCTTCAGCGG+CGG | + | chr4_1:35950508-35950527 | Msa0545550:CDS | 55.0% | |
| GCAAAGATTAGGCGCGGTAG+CGG | - | chr4_1:35951070-35951089 | None:intergenic | 55.0% | |
| CGTGCTGCATTGCTTACCAG+TGG | + | chr4_1:35951679-35951698 | Msa0545550:CDS | 55.0% | |
| !! | GGTGGCGGAAAAGGAAGTGT+TGG | - | chr4_1:35951769-35951788 | None:intergenic | 55.0% |
| GAAGGCTTACAATCGTGGGG+TGG | - | chr4_1:35951787-35951806 | None:intergenic | 55.0% | |
| CCAGTGCAGACTACAGAGGA+AGG | - | chr4_1:35951822-35951841 | None:intergenic | 55.0% | |
| CCTTCCTCTGTAGTCTGCAC+TGG | + | chr4_1:35951819-35951838 | Msa0545550:intron | 55.0% | |
| ! | GAGCAGGACGTTGATGGAAG+CGG | + | chr4_1:35952016-35952035 | Msa0545550:CDS | 55.0% |
| CACAGTCTCCCGCTTCCCAT+CGG | + | chr4_1:35943839-35943858 | Msa0545550:CDS | 60.0% | |
| ACCGACGCACGCGAAGTTTC+CGG | + | chr4_1:35943864-35943883 | Msa0545550:CDS | 60.0% | |
| ! | TTTTCGTCGACGGCGGCGAA+GGG | - | chr4_1:35943915-35943934 | None:intergenic | 60.0% |
| TCACCGGCATACGGATCCAG+CGG | + | chr4_1:35943942-35943961 | Msa0545550:CDS | 60.0% | |
| TACCCCGGTGCGAGAATTGC+TGG | + | chr4_1:35943973-35943992 | Msa0545550:CDS | 60.0% | |
| ACCCCGGTGCGAGAATTGCT+GGG | + | chr4_1:35943974-35943993 | Msa0545550:CDS | 60.0% | |
| ACGCCCAGCAATTCTCGCAC+CGG | - | chr4_1:35943980-35943999 | None:intergenic | 60.0% | |
| CGTGGGGTTGTTCTCTCTGC+GGG | + | chr4_1:35944033-35944052 | Msa0545550:CDS | 60.0% | |
| GCAGTAGAACCCCCTAGGGT+TGG | + | chr4_1:35944943-35944962 | Msa0545550:intron | 60.0% | |
| !! | ACCCCCTAGGGTTGGTTTGG+TGG | + | chr4_1:35944951-35944970 | Msa0545550:intron | 60.0% |
| TCGTGGGTCGCCGAACACAA+CGG | - | chr4_1:35945068-35945087 | None:intergenic | 60.0% | |
| AGAACTCCGGGAGCAGGTCA+AGG | + | chr4_1:35946354-35946373 | Msa0545550:CDS | 60.0% | |
| TCCGGGAGCAGGTCAAGGAA+TGG | + | chr4_1:35946359-35946378 | Msa0545550:CDS | 60.0% | |
| ! | TGCTAGGTGGGCGCGGTTTT+GGG | + | chr4_1:35946391-35946410 | Msa0545550:CDS | 60.0% |
| CAGGTCTGAACCGGACCCTT+CGG | + | chr4_1:35947373-35947392 | Msa0545550:intron | 60.0% | |
| CTAGGGTTTCGCTCACAGGG+GGG | - | chr4_1:35948718-35948737 | None:intergenic | 60.0% | |
| CAGCAGTCCACCACGATTCC+AGG | - | chr4_1:35948775-35948794 | None:intergenic | 60.0% | |
| !! | CTGGAATCGTGGTGGACTGC+TGG | + | chr4_1:35948773-35948792 | Msa0545550:intron | 60.0% |
| CAGGAGGGGTCTCTACAAGC+AGG | + | chr4_1:35949072-35949091 | Msa0545550:CDS | 60.0% | |
| ATTCCCTTCAGCGGCGGCTA+AGG | + | chr4_1:35950514-35950533 | Msa0545550:CDS | 60.0% | |
| GATCCTTAGCCGCCGCTGAA+GGG | - | chr4_1:35950520-35950539 | None:intergenic | 60.0% | |
| GCACGACTCAAGGAATGGCG+AGG | - | chr4_1:35951664-35951683 | None:intergenic | 60.0% | |
| !! | CAATCGTGGGGTGGCGGAAA+AGG | - | chr4_1:35951778-35951797 | None:intergenic | 60.0% |
| GGCTTACAATCGTGGGGTGG+CGG | - | chr4_1:35951784-35951803 | None:intergenic | 60.0% | |
| GACTGTGGCTCTCACCGCCA+TGG | - | chr4_1:35943826-35943845 | None:intergenic | 65.0% | |
| CGATGGGAAGCGGGAGACTG+TGG | - | chr4_1:35943841-35943860 | None:intergenic | 65.0% | |
| ! | GTCGGTGTCCGATGGGAAGC+GGG | - | chr4_1:35943850-35943869 | None:intergenic | 65.0% |
| ! | CGTCGGTGTCCGATGGGAAG+CGG | - | chr4_1:35943851-35943870 | None:intergenic | 65.0% |
| GCCGGAAACTTCGCGTGCGT+CGG | - | chr4_1:35943868-35943887 | None:intergenic | 65.0% | |
| TTTCGTCGACGGCGGCGAAG+GGG | - | chr4_1:35943914-35943933 | None:intergenic | 65.0% | |
| ! | GTTTTCGTCGACGGCGGCGA+AGG | - | chr4_1:35943916-35943935 | None:intergenic | 65.0% |
| TCGCCGCTGGATCCGTATGC+CGG | - | chr4_1:35943948-35943967 | None:intergenic | 65.0% | |
| ! | CCAGCGGCGAGCTTTTACCC+CGG | + | chr4_1:35943958-35943977 | Msa0545550:CDS | 65.0% |
| GCCCAGCAATTCTCGCACCG+GGG | - | chr4_1:35943978-35943997 | None:intergenic | 65.0% | |
| CGCCCAGCAATTCTCGCACC+GGG | - | chr4_1:35943979-35943998 | None:intergenic | 65.0% | |
| TGGGAGAGAACTCCGGGAGC+AGG | + | chr4_1:35946348-35946367 | Msa0545550:CDS | 65.0% | |
| GGTGTTCTGCTAGGTGGGCG+CGG | + | chr4_1:35946384-35946403 | Msa0545550:CDS | 65.0% | |
| ! | CTGCTAGGTGGGCGCGGTTT+TGG | + | chr4_1:35946390-35946409 | Msa0545550:CDS | 65.0% |
| ! | GCTAGGTGGGCGCGGTTTTG+GGG | + | chr4_1:35946392-35946411 | Msa0545550:CDS | 65.0% |
| GGATCCTTAGCCGCCGCTGA+AGG | - | chr4_1:35950521-35950540 | None:intergenic | 65.0% | |
| ! | CGCGTGCGTCGGTGTCCGAT+GGG | - | chr4_1:35943857-35943876 | None:intergenic | 70.0% |
| ! | TCGCGTGCGTCGGTGTCCGA+TGG | - | chr4_1:35943858-35943877 | None:intergenic | 70.0% |
| TTCGTCGACGGCGGCGAAGG+GGG | - | chr4_1:35943913-35943932 | None:intergenic | 70.0% | |
| CCGGGGTAAAAGCTCGCCGC+TGG | - | chr4_1:35943961-35943980 | None:intergenic | 70.0% | |
| !!! | AGGTGGGCGCGGTTTTGGGG+CGG | + | chr4_1:35946395-35946414 | Msa0545550:CDS | 70.0% |
| !!! | GCGCGGTTTTGGGGCGGCAA+TGG | + | chr4_1:35946401-35946420 | Msa0545550:CDS | 70.0% |
| ! | CGCGGTAGCGGCTGCAGTTG+AGG | - | chr4_1:35951058-35951077 | None:intergenic | 70.0% |
| ! | GACGGCGGCGAAGGGGGCGA+CGG | - | chr4_1:35943907-35943926 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 35943698 | 35952496 | 35943698 | ID=Msa0545550;Name=Msa0545550 |
| chr4_1 | mRNA | 35943698 | 35952496 | 35943698 | ID=Msa0545550-mRNA-1;Parent=Msa0545550;Name=Msa0545550-mRNA-1;_AED=0.08;_eAED=0.08;_QI=127|1|1|1|0.92|0.86|15|365|745 |
| chr4_1 | exon | 35943698 | 35944155 | 35943698 | ID=Msa0545550-mRNA-1:exon:9100;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35944248 | 35944316 | 35944248 | ID=Msa0545550-mRNA-1:exon:9101;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35945865 | 35945918 | 35945865 | ID=Msa0545550-mRNA-1:exon:9102;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35946004 | 35946170 | 35946004 | ID=Msa0545550-mRNA-1:exon:9103;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35946288 | 35946474 | 35946288 | ID=Msa0545550-mRNA-1:exon:9104;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35946589 | 35946734 | 35946589 | ID=Msa0545550-mRNA-1:exon:9105;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35946809 | 35946963 | 35946809 | ID=Msa0545550-mRNA-1:exon:9106;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35947818 | 35947899 | 35947818 | ID=Msa0545550-mRNA-1:exon:9107;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35947986 | 35948101 | 35947986 | ID=Msa0545550-mRNA-1:exon:9108;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35948995 | 35949093 | 35948995 | ID=Msa0545550-mRNA-1:exon:9109;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35950503 | 35950629 | 35950503 | ID=Msa0545550-mRNA-1:exon:9110;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35950893 | 35951170 | 35950893 | ID=Msa0545550-mRNA-1:exon:9111;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35951582 | 35951796 | 35951582 | ID=Msa0545550-mRNA-1:exon:9112;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35951900 | 35952387 | 35951900 | ID=Msa0545550-mRNA-1:exon:9113;Parent=Msa0545550-mRNA-1 |
| chr4_1 | exon | 35952408 | 35952496 | 35952408 | ID=Msa0545550-mRNA-1:exon:9114;Parent=Msa0545550-mRNA-1 |
| chr4_1 | five_prime_UTR | 35943698 | 35943824 | 35943698 | ID=Msa0545550-mRNA-1:five_prime_utr;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35943825 | 35944155 | 35943825 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35944248 | 35944316 | 35944248 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35945865 | 35945918 | 35945865 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35946004 | 35946170 | 35946004 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35946288 | 35946474 | 35946288 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35946589 | 35946734 | 35946589 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35946809 | 35946963 | 35946809 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35947818 | 35947899 | 35947818 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35947986 | 35948101 | 35947986 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35948995 | 35949093 | 35948995 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35950503 | 35950629 | 35950503 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35950893 | 35951170 | 35950893 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35951582 | 35951796 | 35951582 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | CDS | 35951900 | 35952111 | 35951900 | ID=Msa0545550-mRNA-1:cds;Parent=Msa0545550-mRNA-1 |
| chr4_1 | three_prime_UTR | 35952112 | 35952387 | 35952112 | ID=Msa0545550-mRNA-1:three_prime_utr;Parent=Msa0545550-mRNA-1 |
| chr4_1 | three_prime_UTR | 35952408 | 35952496 | 35952408 | ID=Msa0545550-mRNA-1:three_prime_utr;Parent=Msa0545550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
