AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0552770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0552770 MtrunA17_Chr4g0038271 97.491 558 10 1 1 554 12 569 0.0 1122
Msa0552770 MtrunA17_Chr1g0164321 74.332 561 136 4 1 556 1 558 0.0 818
Msa0552770 MtrunA17_Chr7g0214931 70.946 444 119 4 15 456 4 439 0.0 623
Msa0552770 MtrunA17_Chr1g0164351 71.596 426 118 1 1 426 1 423 0.0 610
Msa0552770 MtrunA17_Chr8g0348751 47.104 518 258 8 38 546 1 511 1.68e-159 466
Msa0552770 MtrunA17_Chr8g0387001 47.184 515 253 10 44 550 7 510 4.24e-159 464
Msa0552770 MtrunA17_Chr5g0429651 45.833 504 249 9 53 545 18 508 1.98e-145 429
Msa0552770 MtrunA17_Chr3g0104351 44.200 500 240 8 66 545 36 516 1.62e-144 427
Msa0552770 MtrunA17_Chr7g0227281 39.286 504 290 6 43 545 6 494 5.42e-131 391
Msa0552770 MtrunA17_Chr8g0380501 38.523 501 293 5 46 545 5 491 6.67e-130 388
Msa0552770 MtrunA17_Chr7g0255131 43.217 516 257 14 46 545 13 508 2.28e-129 387
Msa0552770 MtrunA17_Chr7g0227291 39.087 504 291 5 43 545 6 494 2.54e-129 387
Msa0552770 MtrunA17_Chr1g0163281 38.685 517 301 9 34 545 14 519 3.33e-126 380
Msa0552770 MtrunA17_Chr1g0163491 38.837 533 294 10 28 545 6 521 1.05e-125 379
Msa0552770 MtrunA17_Chr1g0163351 38.356 511 300 6 41 545 4 505 1.32e-124 375
Msa0552770 MtrunA17_Chr6g0449341 36.961 533 306 9 30 545 44 563 2.19e-124 377
Msa0552770 MtrunA17_Chr4g0067191 39.695 524 282 12 44 545 4 515 7.59e-121 366
Msa0552770 MtrunA17_Chr1g0163421 37.232 513 305 9 41 545 37 540 1.55e-120 366
Msa0552770 MtrunA17_Chr2g0321171 42.117 463 238 8 86 545 63 498 2.22e-120 364
Msa0552770 MtrunA17_Chr7g0260831 40.323 496 258 16 62 545 33 502 1.46e-118 360
Msa0552770 MtrunA17_Chr4g0004481 37.449 494 293 5 48 540 9 487 4.65e-118 358
Msa0552770 MtrunA17_Chr1g0163461 35.962 520 316 9 34 545 9 519 5.04e-118 359
Msa0552770 MtrunA17_Chr1g0163501 39.122 501 285 11 52 545 12 499 2.29e-117 356
Msa0552770 MtrunA17_Chr6g0449381 37.449 494 294 6 56 545 23 505 8.37e-117 355
Msa0552770 MtrunA17_Chr1g0163391 38.077 520 284 15 42 545 5 502 1.69e-116 354
Msa0552770 MtrunA17_Chr8g0351401 40.598 468 263 10 87 549 58 515 1.92e-115 352
Msa0552770 MtrunA17_Chr7g0260821 39.918 486 257 11 70 545 43 503 5.58e-115 350
Msa0552770 MtrunA17_Chr1g0163451 36.923 520 311 10 34 545 14 524 1.06e-114 350
Msa0552770 MtrunA17_Chr6g0449331 35.645 519 304 9 44 545 10 515 2.79e-114 349
Msa0552770 MtrunA17_Chr3g0119681 39.139 511 278 10 55 545 20 517 9.14e-114 348
Msa0552770 MtrunA17_Chr8g0351441 41.703 458 248 11 95 545 64 509 4.75e-113 345
Msa0552770 MtrunA17_Chr8g0351461 42.140 458 246 11 95 545 64 509 5.01e-113 345
Msa0552770 MtrunA17_Chr6g0449361 38.000 500 284 10 56 546 22 504 5.58e-113 345
Msa0552770 MtrunA17_Chr1g0171041 38.610 518 286 16 44 545 5 506 1.20e-112 345
Msa0552770 MtrunA17_Chr4g0026941 40.000 475 246 10 86 545 89 539 7.18e-112 343
Msa0552770 MtrunA17_Chr1g0163511 37.673 507 294 10 52 545 21 518 1.22e-111 342
Msa0552770 MtrunA17_Chr8g0351421 38.403 526 299 15 28 545 2 510 1.80e-111 342
Msa0552770 MtrunA17_Chr1g0184421 41.068 487 251 13 70 545 43 504 7.76e-110 337
Msa0552770 MtrunA17_Chr1g0163211 36.204 511 294 10 46 545 12 501 8.58e-110 337
Msa0552770 MtrunA17_Chr1g0204271 37.236 521 284 17 43 546 13 507 3.15e-107 330
Msa0552770 MtrunA17_Chr6g0449351 37.069 464 275 7 86 544 11 462 8.57e-107 328
Msa0552770 MtrunA17_Chr1g0184461 39.245 530 270 17 44 547 3 506 1.30e-106 329
Msa0552770 MtrunA17_Chr8g0351391 38.013 463 270 9 87 546 64 512 2.17e-106 328
Msa0552770 MtrunA17_Chr1g0163401 36.852 521 299 9 42 545 5 512 1.67e-105 326
Msa0552770 MtrunA17_Chr1g0178971 38.991 436 241 7 86 518 68 481 2.87e-103 320
Msa0552770 MtrunA17_Chr7g0225531 37.427 513 290 10 43 545 20 511 4.37e-103 320
Msa0552770 MtrunA17_Chr8g0351311 37.931 464 267 12 87 544 64 512 1.19e-101 316
Msa0552770 MtrunA17_Chr1g0183611 35.885 418 254 6 122 532 2 412 1.25e-89 282
Msa0552770 MtrunA17_Chr1g0163431 36.211 417 251 8 75 487 1 406 8.69e-86 272
Msa0552770 MtrunA17_Chr1g0184471 39.221 385 180 11 87 464 54 391 2.10e-72 236
Msa0552770 MtrunA17_Chr1g0163371 45.415 229 116 4 319 545 1 222 7.98e-69 221
Msa0552770 MtrunA17_Chr5g0403451 39.147 258 137 3 305 545 25 279 4.58e-61 203
Msa0552770 MtrunA17_Chr1g0164341 79.630 108 21 1 450 556 1 108 3.38e-56 184
Msa0552770 MtrunA17_Chr1g0204241 32.267 344 177 11 213 546 1 298 9.52e-52 179
Msa0552770 MtrunA17_Chr5g0403441 37.956 274 158 9 44 315 19 282 2.66e-49 172
Msa0552770 MtrunA17_Chr1g0163361 34.559 272 172 4 33 300 12 281 3.17e-45 161
Msa0552770 MtrunA17_Chr7g0214921 76.543 81 19 0 476 556 1 81 1.04e-38 136
Msa0552770 MtrunA17_Chr0c19g0493771 26.496 468 307 15 99 556 219 659 1.27e-38 150
Msa0552770 MtrunA17_Chr1g0164331 72.917 96 24 2 426 519 1 96 1.36e-35 130
Msa0552770 MtrunA17_Chr5g0396521 24.260 507 312 18 86 548 95 573 2.84e-32 130
Msa0552770 MtrunA17_Chr7g0215181 25.121 414 251 12 145 542 136 506 3.07e-31 127
Msa0552770 MtrunA17_Chr1g0179811 24.431 483 297 17 87 545 101 539 6.92e-31 126
Msa0552770 MtrunA17_Chr8g0357121 51.485 101 49 0 420 520 25 125 3.50e-30 115
Msa0552770 MtrunA17_Chr2g0309301 42.353 170 86 4 204 372 1 159 7.43e-30 115
Msa0552770 MtrunA17_Chr8g0354511 25.170 441 288 13 115 544 114 523 1.72e-28 119
Msa0552770 MtrunA17_Chr5g0446151 25.240 416 270 14 113 518 85 469 1.34e-27 116
Msa0552770 MtrunA17_Chr6g0457421 25.366 410 263 14 145 546 134 508 2.91e-27 115
Msa0552770 MtrunA17_Chr2g0313771 25.490 408 266 9 147 544 143 522 1.38e-26 113
Msa0552770 MtrunA17_Chr5g0446161 25.122 410 277 12 113 518 85 468 1.92e-26 112
Msa0552770 MtrunA17_Chr2g0308941 34.043 188 102 5 112 282 12 194 1.62e-25 104
Msa0552770 MtrunA17_Chr1g0203151 22.947 414 273 11 136 538 126 504 1.71e-25 110
Msa0552770 MtrunA17_Chr1g0203141 23.245 413 273 12 136 538 130 508 2.05e-25 110
Msa0552770 MtrunA17_Chr3g0128461 24.402 418 274 11 132 538 131 517 2.41e-25 109
Msa0552770 MtrunA17_Chr6g0472221 23.570 437 281 14 118 538 120 519 2.53e-25 109
Msa0552770 MtrunA17_Chr8g0364081 22.951 427 276 11 139 540 138 536 3.03e-25 109
Msa0552770 MtrunA17_Chr7g0248991 25.886 367 241 11 124 483 23 365 7.14e-25 106
Msa0552770 MtrunA17_Chr8g0354571 23.476 443 293 13 115 544 114 523 9.13e-25 108
Msa0552770 MtrunA17_Chr6g0466901 24.023 512 341 14 39 525 5 493 9.73e-25 107
Msa0552770 MtrunA17_Chr5g0431511 25.478 471 293 17 71 521 41 473 9.86e-25 107
Msa0552770 MtrunA17_Chr6g0479681 21.801 422 276 11 140 538 132 522 1.52e-24 107
Msa0552770 MtrunA17_Chr2g0313821 23.333 450 280 17 118 544 108 515 1.53e-24 107
Msa0552770 MtrunA17_Chr8g0354531 23.478 460 299 14 99 544 224 644 2.58e-24 107
Msa0552770 MtrunA17_Chr2g0313811 23.318 446 297 15 118 544 108 527 2.67e-24 106
Msa0552770 MtrunA17_Chr2g0313831 23.043 447 303 15 109 544 99 515 3.07e-24 106
Msa0552770 MtrunA17_Chr2g0313801 24.153 443 285 15 118 544 108 515 8.64e-24 105
Msa0552770 MtrunA17_Chr8g0357111 38.406 138 81 2 95 232 64 197 9.39e-24 99.4
Msa0552770 MtrunA17_Chr2g0313781 23.278 421 283 13 142 544 129 527 2.37e-23 103
Msa0552770 MtrunA17_Chr3g0086691 22.883 437 271 15 109 515 71 471 4.74e-23 102
Msa0552770 MtrunA17_Chr1g0174461 25.901 444 292 14 108 536 74 495 5.92e-23 102
Msa0552770 MtrunA17_Chr8g0377341 23.505 485 333 16 70 547 74 527 1.21e-22 101
Msa0552770 MtrunA17_Chr2g0307291 22.921 445 305 14 109 544 102 517 1.64e-22 101
Msa0552770 MtrunA17_Chr2g0313751 23.810 441 286 15 115 540 133 538 1.81e-22 101
Msa0552770 MtrunA17_Chr2g0313791 22.857 420 269 12 142 544 129 510 2.25e-22 100
Msa0552770 MtrunA17_Chr2g0313761 23.624 436 293 12 115 540 101 506 2.33e-22 100
Msa0552770 MtrunA17_Chr5g0445381 24.622 463 294 16 71 518 77 499 2.84e-22 100
Msa0552770 MtrunA17_Chr4g0058231 23.864 440 304 10 109 535 67 488 4.35e-22 99.8
Msa0552770 MtrunA17_Chr8g0390881 23.452 533 353 18 34 544 5 504 5.97e-22 99.4
Msa0552770 MtrunA17_Chr6g0484841 23.222 478 307 13 57 514 31 468 6.03e-22 99.4
Msa0552770 MtrunA17_Chr1g0174471 24.660 515 337 17 43 536 27 511 8.71e-22 99.0
Msa0552770 MtrunA17_Chr1g0174481 25.450 444 289 14 109 536 73 490 1.02e-21 98.6
Msa0552770 MtrunA17_Chr4g0004601 22.131 488 314 13 81 544 85 530 1.37e-21 98.6
Msa0552770 MtrunA17_Chr5g0445441 25.502 498 311 19 41 518 52 509 2.32e-21 97.8
Msa0552770 MtrunA17_Chr2g0280061 29.167 216 142 4 334 545 3 211 2.35e-21 92.8
Msa0552770 MtrunA17_Chr3g0086661 23.488 430 269 13 112 514 74 470 2.38e-21 97.4
Msa0552770 MtrunA17_Chr2g0280011 28.704 216 143 4 334 545 3 211 3.19e-21 92.4
Msa0552770 MtrunA17_Chr1g0174451 24.824 427 288 13 110 524 77 482 3.45e-21 97.1
Msa0552770 MtrunA17_Chr2g0288661 22.297 444 303 14 115 547 108 520 3.63e-21 97.1
Msa0552770 MtrunA17_Chr3g0107611 23.810 483 307 18 46 495 24 478 4.58e-21 96.7
Msa0552770 MtrunA17_Chr5g0446131 21.973 446 308 12 109 544 98 513 6.86e-21 96.3
Msa0552770 MtrunA17_Chr2g0280081 26.545 275 190 5 276 545 737 1004 7.26e-21 97.1
Msa0552770 MtrunA17_Chr2g0280081 28.155 206 137 4 335 536 296 494 6.96e-16 81.3
Msa0552770 MtrunA17_Chr7g0218611 24.582 419 286 13 106 514 66 464 9.73e-21 95.5
Msa0552770 MtrunA17_Chr2g0307301 22.472 445 295 17 115 544 108 517 1.15e-20 95.5
Msa0552770 MtrunA17_Chr5g0413911 29.333 225 146 5 325 545 313 528 1.58e-20 95.1
Msa0552770 MtrunA17_Chr7g0246221 23.422 491 324 14 49 520 16 473 1.65e-20 94.7
Msa0552770 MtrunA17_Chr7g0235261 21.610 472 322 11 88 544 71 509 1.89e-20 94.7
Msa0552770 MtrunA17_Chr4g0046681 28.431 204 132 3 324 525 16 207 1.97e-20 90.5
Msa0552770 MtrunA17_Chr2g0309311 30.729 192 93 3 311 502 16 167 2.26e-20 89.4
Msa0552770 MtrunA17_Chr2g0280071 26.786 280 183 6 279 548 272 539 2.54e-20 95.1
Msa0552770 MtrunA17_Chr3g0086651 23.023 430 271 13 112 514 74 470 2.78e-20 94.4
Msa0552770 MtrunA17_Chr6g0466941 23.495 515 341 16 39 525 5 494 3.39e-20 94.0
Msa0552770 MtrunA17_Chr4g0030711 28.643 199 125 5 327 521 301 486 3.61e-20 94.0
Msa0552770 MtrunA17_Chr1g0164211 29.319 191 122 3 309 499 266 443 3.82e-20 93.6
Msa0552770 MtrunA17_Chr3g0101731 23.669 507 342 17 46 540 15 488 4.29e-20 93.6
Msa0552770 MtrunA17_Chr6g0484811 22.844 429 285 12 106 515 69 470 4.35e-20 93.6
Msa0552770 MtrunA17_Chr3g0094171 21.984 514 332 20 35 518 3 477 5.04e-20 93.6
Msa0552770 MtrunA17_Chr6g0451811 29.843 191 120 3 337 525 3 181 5.65e-20 88.6
Msa0552770 MtrunA17_Chr1g0156101 21.924 447 307 11 114 541 77 500 5.79e-20 93.2
Msa0552770 MtrunA17_Chr5g0431641 23.095 420 271 12 115 518 85 468 5.84e-20 93.2
Msa0552770 MtrunA17_Chr6g0451641 28.030 264 172 7 266 525 244 493 1.01e-19 92.4
Msa0552770 MtrunA17_Chr5g0430081 23.654 520 331 16 46 540 11 489 1.38e-19 92.0
Msa0552770 MtrunA17_Chr4g0047631 23.961 409 286 10 114 518 93 480 1.47e-19 92.0
Msa0552770 MtrunA17_Chr8g0387101 27.178 287 198 4 264 545 226 506 1.61e-19 92.0
Msa0552770 MtrunA17_Chr4g0014051 23.973 438 274 13 127 544 129 527 2.21e-19 91.7
Msa0552770 MtrunA17_Chr4g0058281 23.117 385 269 7 153 531 131 494 2.79e-19 91.3
Msa0552770 MtrunA17_Chr7g0265611 27.599 279 174 11 272 544 250 506 3.11e-19 90.9
Msa0552770 MtrunA17_Chr1g0174441 25.412 425 280 13 109 518 95 497 3.50e-19 90.9
Msa0552770 MtrunA17_Chr4g0058191 25.312 320 216 7 199 515 156 455 4.45e-19 90.5
Msa0552770 MtrunA17_Chr4g0063221 22.759 435 299 10 115 540 108 514 4.88e-19 90.5
Msa0552770 MtrunA17_Chr1g0151221 22.587 549 352 19 43 545 7 528 5.46e-19 90.5
Msa0552770 MtrunA17_Chr3g0094231 23.729 472 293 18 70 518 43 470 5.81e-19 90.1
Msa0552770 MtrunA17_Chr1g0193811 22.297 444 289 12 115 540 106 511 6.38e-19 90.1
Msa0552770 MtrunA17_Chr5g0445531 24.337 415 271 12 115 518 85 467 6.62e-19 90.1
Msa0552770 MtrunA17_Chr5g0409051 26.490 302 191 9 262 545 220 508 6.64e-19 90.1
Msa0552770 MtrunA17_Chr3g0101671 22.672 494 329 16 47 518 11 473 8.55e-19 89.7
Msa0552770 MtrunA17_Chr2g0310391 23.239 426 268 14 115 518 73 461 9.18e-19 89.4
Msa0552770 MtrunA17_Chr4g0061381 23.095 433 265 16 112 514 73 467 1.01e-18 89.4
Msa0552770 MtrunA17_Chr2g0280121 27.897 233 156 5 317 545 285 509 1.17e-18 89.4
Msa0552770 MtrunA17_Chr8g0339331 24.433 397 242 12 174 542 134 500 1.64e-18 89.0
Msa0552770 MtrunA17_Chr4g0047691 25.155 322 216 7 202 518 182 483 1.70e-18 89.0
Msa0552770 MtrunA17_Chr5g0403351 23.228 508 317 22 40 515 2 468 1.86e-18 88.6
Msa0552770 MtrunA17_Chr2g0314731 25.837 209 143 2 310 518 269 465 2.13e-18 88.2
Msa0552770 MtrunA17_Chr5g0430071 26.506 249 160 7 272 512 86 319 2.68e-18 86.7
Msa0552770 MtrunA17_Chr4g0058201 23.544 412 287 9 109 514 67 456 3.02e-18 87.8
Msa0552770 MtrunA17_Chr5g0430131 24.828 290 196 6 272 551 233 510 3.16e-18 87.8
Msa0552770 MtrunA17_Chr1g0162811 22.857 420 278 14 109 514 77 464 3.27e-18 87.8
Msa0552770 MtrunA17_Chr3g0101611 22.388 469 324 13 66 525 41 478 4.26e-18 87.4
Msa0552770 MtrunA17_Chr8g0362731 21.739 437 290 11 123 544 8 407 4.67e-18 86.7
Msa0552770 MtrunA17_Chr5g0445421 22.276 413 262 9 115 518 159 521 5.12e-18 87.4
Msa0552770 MtrunA17_Chr4g0047641 22.624 526 345 16 27 525 1 491 5.68e-18 87.0
Msa0552770 MtrunA17_Chr1g0154731 22.467 454 276 15 115 545 102 502 5.88e-18 87.0
Msa0552770 MtrunA17_Chr6g0472311 26.646 319 204 9 207 514 181 480 5.95e-18 87.0
Msa0552770 MtrunA17_Chr2g0310381 22.010 418 283 10 115 518 73 461 6.26e-18 87.0
Msa0552770 MtrunA17_Chr3g0101721 21.677 489 335 15 46 518 15 471 8.44e-18 86.7
Msa0552770 MtrunA17_Chr8g0362701 22.799 443 306 13 109 536 74 495 9.66e-18 86.3
Msa0552770 MtrunA17_Chr6g0458561 26.449 276 177 9 271 542 260 513 1.07e-17 86.3
Msa0552770 MtrunA17_Chr8g0361471 23.108 502 325 19 42 518 4 469 1.53e-17 85.9
Msa0552770 MtrunA17_Chr2g0308651 23.256 430 281 12 139 546 14 416 1.56e-17 85.1
Msa0552770 MtrunA17_Chr1g0207841 25.200 250 163 7 311 557 285 513 1.65e-17 85.9
Msa0552770 MtrunA17_Chr3g0116681 21.649 485 327 14 46 514 20 467 1.72e-17 85.5
Msa0552770 MtrunA17_Chr5g0431671 21.687 415 283 12 115 518 86 469 1.76e-17 85.5
Msa0552770 MtrunA17_Chr8g0356001 23.433 367 236 10 159 511 132 467 1.89e-17 85.5
Msa0552770 MtrunA17_Chr5g0405001 25.896 251 163 6 272 512 238 475 1.93e-17 85.5
Msa0552770 MtrunA17_Chr4g0047661 24.551 501 314 19 43 518 24 485 2.12e-17 85.5
Msa0552770 MtrunA17_Chr4g0058211 29.379 177 113 2 338 514 18 182 2.53e-17 81.3
Msa0552770 MtrunA17_Chr4g0020041 22.101 457 299 16 108 546 76 493 2.57e-17 85.1
Msa0552770 MtrunA17_Chr4g0008101 24.219 512 314 21 43 516 16 491 2.67e-17 85.1
Msa0552770 MtrunA17_Chr1g0176831 26.389 216 146 3 297 511 285 488 2.70e-17 85.1
Msa0552770 MtrunA17_Chr3g0101571 22.791 430 275 15 109 518 75 467 2.97e-17 84.7
Msa0552770 MtrunA17_Chr5g0445461 22.249 418 277 11 115 518 85 468 3.18e-17 84.7
Msa0552770 MtrunA17_Chr2g0314721 26.733 202 136 2 310 511 280 469 3.21e-17 84.7
Msa0552770 MtrunA17_Chr6g0463801 23.096 407 282 13 113 514 81 461 4.31e-17 84.3
Msa0552770 MtrunA17_Chr8g0362481 25.217 460 274 18 109 536 5 426 4.34e-17 84.0
Msa0552770 MtrunA17_Chr3g0082701 25.556 270 178 7 265 525 246 501 4.62e-17 84.3
Msa0552770 MtrunA17_Chr5g0403331 22.555 501 330 17 40 515 2 469 5.49e-17 84.0
Msa0552770 MtrunA17_Chr6g0451781 25.651 269 177 8 265 525 280 533 5.59e-17 84.3
Msa0552770 MtrunA17_Chr7g0246131 23.632 402 270 13 160 546 126 505 5.72e-17 84.0
Msa0552770 MtrunA17_Chr5g0419691 25.000 372 245 11 152 514 114 460 6.23e-17 84.0
Msa0552770 MtrunA17_Chr4g0011871 24.397 373 247 11 152 514 114 461 7.54e-17 83.6
Msa0552770 MtrunA17_Chr4g0046321 24.823 282 181 9 250 518 211 474 8.25e-17 83.6
Msa0552770 MtrunA17_Chr3g0107541 23.786 412 259 14 109 495 92 473 8.91e-17 83.6
Msa0552770 MtrunA17_Chr6g0451741 22.736 519 339 17 28 516 27 513 1.16e-16 83.2
Msa0552770 MtrunA17_Chr5g0443401 26.562 320 191 13 215 532 183 460 1.21e-16 82.8
Msa0552770 MtrunA17_Chr5g0430101 24.567 289 197 6 272 551 232 508 1.32e-16 82.8
Msa0552770 MtrunA17_Chr4g0046351 24.825 286 184 9 250 522 211 478 1.73e-16 82.4
Msa0552770 MtrunA17_Chr5g0406651 25.405 370 244 11 153 514 116 461 1.88e-16 82.4
Msa0552770 MtrunA17_Chr4g0011961 22.288 507 325 19 37 518 1 463 1.95e-16 82.4
Msa0552770 MtrunA17_Chr6g0466331 23.108 502 325 20 42 518 4 469 1.96e-16 82.4
Msa0552770 MtrunA17_Chr5g0431591 22.709 251 174 5 272 518 52 286 2.02e-16 80.5
Msa0552770 MtrunA17_Chr5g0430091 24.176 273 189 4 272 540 233 491 2.05e-16 82.4
Msa0552770 MtrunA17_Chr3g0135841 21.778 450 260 15 151 545 124 536 2.26e-16 82.0
Msa0552770 MtrunA17_Chr8g0364651 24.621 264 182 5 289 545 245 498 2.27e-16 82.0
Msa0552770 MtrunA17_Chr6g0451681 25.654 191 128 3 328 516 266 444 2.29e-16 82.0
Msa0552770 MtrunA17_Chr4g0030701 24.500 200 134 4 327 522 298 484 2.48e-16 82.0
Msa0552770 MtrunA17_Chr1g0197891 24.590 244 162 6 287 527 246 470 2.74e-16 81.6
Msa0552770 MtrunA17_Chr3g0101691 22.565 421 278 15 115 518 84 473 2.78e-16 81.6
Msa0552770 MtrunA17_Chr1g0197881 24.590 244 162 6 287 527 245 469 2.81e-16 81.6
Msa0552770 MtrunA17_Chr1g0200961 22.306 529 340 17 38 540 1 484 2.81e-16 81.6
Msa0552770 MtrunA17_Chr1g0155671 77.551 49 9 2 332 379 11 58 2.85e-16 73.9
Msa0552770 MtrunA17_Chr6g0472171 29.008 131 92 1 408 538 22 151 2.93e-16 76.3
Msa0552770 MtrunA17_Chr6g0451691 22.137 524 318 19 41 516 14 495 2.95e-16 81.6
Msa0552770 MtrunA17_Chr1g0197851 24.590 244 162 6 287 527 246 470 2.97e-16 81.6
Msa0552770 MtrunA17_Chr4g0011921 24.397 373 254 10 152 518 114 464 3.14e-16 81.6
Msa0552770 MtrunA17_Chr4g0011981 23.059 425 293 11 106 518 62 464 3.25e-16 81.6
Msa0552770 MtrunA17_Chr8g0390871 26.562 192 129 3 321 512 9 188 3.63e-16 78.2
Msa0552770 MtrunA17_Chr4g0046331 24.653 288 184 9 250 522 211 480 3.66e-16 81.6
Msa0552770 MtrunA17_Chr4g0056951 23.308 399 267 13 150 535 126 498 4.09e-16 81.3
Msa0552770 MtrunA17_Chr6g0465511 22.863 503 325 20 42 518 4 469 4.74e-16 81.3
Msa0552770 MtrunA17_Chr1g0197871 23.016 378 248 11 160 527 126 470 4.76e-16 80.9
Msa0552770 MtrunA17_Chr5g0430031 21.414 481 324 10 58 521 32 475 4.78e-16 81.3
Msa0552770 MtrunA17_Chr8g0370641 22.461 512 341 16 42 523 9 494 5.36e-16 80.9
Msa0552770 MtrunA17_Chr7g0246181 25.068 367 237 11 160 514 126 466 5.74e-16 80.9
Msa0552770 MtrunA17_Chr4g0039901 22.951 244 171 3 302 540 263 494 7.44e-16 80.5
Msa0552770 MtrunA17_Chr3g0116741 21.670 443 309 12 109 541 90 504 7.70e-16 80.5
Msa0552770 MtrunA17_Chr6g0484261 28.662 157 111 1 41 197 4 159 8.00e-16 75.1
Msa0552770 MtrunA17_Chr4g0046631 25.283 265 177 7 265 525 248 495 8.38e-16 80.5
Msa0552770 MtrunA17_Chr4g0052861 22.016 377 255 9 158 525 122 468 9.36e-16 80.1
Msa0552770 MtrunA17_Chr3g0107501 24.545 330 216 12 186 515 152 448 1.17e-15 79.7
Msa0552770 MtrunA17_Chr4g0024771 20.903 421 279 12 115 518 85 468 1.48e-15 79.3
Msa0552770 MtrunA17_Chr8g0354541 23.936 188 130 2 357 544 3 177 1.60e-15 74.7
Msa0552770 MtrunA17_Chr7g0246121 23.333 360 250 11 160 514 126 464 1.65e-15 79.3
Msa0552770 MtrunA17_Chr6g0451751 21.807 509 334 17 41 516 14 491 1.75e-15 79.3
Msa0552770 MtrunA17_Chr5g0395321 23.000 200 142 2 319 518 278 465 1.88e-15 79.3
Msa0552770 MtrunA17_Chr8g0351801 29.744 195 114 4 337 521 308 489 1.96e-15 79.3
Msa0552770 MtrunA17_Chr7g0258211 22.042 431 275 12 115 518 84 480 3.20e-15 78.6
Msa0552770 MtrunA17_Chr8g0380471 25.610 246 166 6 276 519 221 451 3.23e-15 78.2
Msa0552770 MtrunA17_Chr2g0293421 22.366 465 289 19 70 517 52 461 3.87e-15 78.2
Msa0552770 MtrunA17_Chr5g0395331 22.010 209 151 2 310 518 276 472 4.10e-15 78.2
Msa0552770 MtrunA17_Chr5g0419451 23.673 245 168 6 272 514 257 484 4.33e-15 78.2
Msa0552770 MtrunA17_Chr2g0293411 25.095 263 173 5 268 519 213 462 4.98e-15 77.8
Msa0552770 MtrunA17_Chr8g0381571 28.788 198 125 6 302 499 263 444 4.99e-15 77.8
Msa0552770 MtrunA17_Chr7g0246151 25.714 210 139 5 342 551 306 498 5.10e-15 77.8
Msa0552770 MtrunA17_Chr3g0101581 21.031 485 339 13 43 514 13 466 5.28e-15 77.8
Msa0552770 MtrunA17_Chr5g0395381 22.000 200 144 2 319 518 253 440 5.81e-15 77.4
Msa0552770 MtrunA17_Chr1g0162801 22.749 422 287 14 109 518 77 471 6.14e-15 77.4
Msa0552770 MtrunA17_Chr2g0304871 24.065 428 280 16 109 525 98 491 6.17e-15 77.8
Msa0552770 MtrunA17_Chr1g0182861 28.244 131 93 1 408 538 27 156 6.61e-15 72.8
Msa0552770 MtrunA17_Chr8g0381541 27.604 192 126 5 308 499 266 444 7.34e-15 77.4
Msa0552770 MtrunA17_Chr3g0107511 24.451 319 198 12 186 499 152 432 8.70e-15 77.0
Msa0552770 MtrunA17_Chr4g0057001 26.728 217 142 6 302 514 277 480 9.34e-15 77.0
Msa0552770 MtrunA17_Chr4g0052881 22.067 358 246 8 158 510 122 451 9.86e-15 77.0
Msa0552770 MtrunA17_Chr7g0262111 22.398 442 303 13 109 545 98 504 1.16e-14 76.6
Msa0552770 MtrunA17_Chr5g0401691 22.830 530 339 20 14 525 8 485 1.24e-14 76.6
Msa0552770 MtrunA17_Chr2g0280041 26.577 222 152 4 328 545 321 535 1.91e-14 76.3
Msa0552770 MtrunA17_Chr5g0401681 21.751 354 240 8 154 499 118 442 2.36e-14 75.9
Msa0552770 MtrunA17_Chr8g0370651 23.318 446 296 15 70 495 51 470 2.57e-14 75.9
Msa0552770 MtrunA17_Chr4g0035921 24.793 242 156 7 284 512 247 475 2.62e-14 75.5
Msa0552770 MtrunA17_Chr2g0314781 27.329 161 105 2 358 518 4 152 2.97e-14 71.2
Msa0552770 MtrunA17_Chr5g0445451 22.695 423 269 14 115 518 85 468 4.08e-14 75.1
Msa0552770 MtrunA17_Chr5g0430111 24.510 204 139 2 272 471 233 425 4.18e-14 74.7
Msa0552770 MtrunA17_Chr5g0403931 24.650 357 229 12 177 522 131 458 4.90e-14 74.7
Msa0552770 MtrunA17_Chr2g0296651 24.201 219 149 3 307 525 267 468 6.19e-14 74.3
Msa0552770 MtrunA17_Chr8g0372251 28.085 235 145 9 272 495 229 450 7.00e-14 74.3
Msa0552770 MtrunA17_Chr1g0160851 22.764 369 252 11 153 514 119 461 7.36e-14 74.3
Msa0552770 MtrunA17_Chr2g0280261 22.912 419 268 14 113 514 78 458 7.45e-14 74.3
Msa0552770 MtrunA17_Chr6g0463791 22.482 427 278 16 109 518 77 467 7.58e-14 73.9
Msa0552770 MtrunA17_Chr3g0101631 22.056 467 299 16 71 518 44 464 9.65e-14 73.9
Msa0552770 MtrunA17_Chr3g0101821 22.065 494 329 19 46 518 11 469 1.07e-13 73.6
Msa0552770 MtrunA17_Chr1g0167321 23.855 415 273 13 114 514 79 464 1.29e-13 73.6
Msa0552770 MtrunA17_Chr6g0451771 25.789 190 127 3 338 525 21 198 1.39e-13 70.5
Msa0552770 MtrunA17_Chr4g0011851 26.064 188 127 3 327 514 4 179 1.52e-13 70.1
Msa0552770 MtrunA17_Chr4g0058261 22.656 384 257 14 146 518 145 499 1.54e-13 73.2
Msa0552770 MtrunA17_Chr3g0101621 22.664 503 320 20 40 518 2 459 1.66e-13 73.2
Msa0552770 MtrunA17_Chr1g0156081 22.788 452 303 13 115 543 102 530 1.88e-13 73.2
Msa0552770 MtrunA17_Chr5g0402981 28.729 181 112 7 349 525 2 169 2.38e-13 69.3
Msa0552770 MtrunA17_Chr1g0160861 24.286 280 186 8 242 514 42 302 3.46e-13 70.9
Msa0552770 MtrunA17_Chr7g0224551 23.308 266 173 8 262 511 213 463 4.34e-13 71.6
Msa0552770 MtrunA17_Chr8g0355961 22.465 503 336 14 27 511 1 467 4.50e-13 71.6
Msa0552770 MtrunA17_Chr5g0430041 28.467 137 97 1 379 515 5 140 4.61e-13 67.8
Msa0552770 MtrunA17_Chr7g0224561 23.308 266 173 8 262 511 213 463 5.55e-13 71.6
Msa0552770 MtrunA17_Chr1g0205361 23.673 245 168 6 272 514 234 461 6.14e-13 71.2
Msa0552770 MtrunA17_Chr8g0351411 60.870 46 18 0 450 495 1 46 8.56e-13 63.2
Msa0552770 MtrunA17_Chr5g0430151 24.841 157 115 2 384 540 9 162 9.41e-13 67.0
Msa0552770 MtrunA17_Chr8g0339311 23.664 262 177 8 302 554 283 530 9.60e-13 70.9
Msa0552770 MtrunA17_Chr5g0423621 31.293 147 89 6 400 544 35 171 1.13e-12 66.6
Msa0552770 MtrunA17_Chr4g0046661 26.633 199 132 3 328 524 14 200 1.27e-12 67.8
Msa0552770 MtrunA17_Chr8g0334941 23.881 268 165 9 269 523 65 306 1.29e-12 69.3
Msa0552770 MtrunA17_Chr4g0039391 22.706 436 294 13 113 532 78 486 1.31e-12 70.1
Msa0552770 MtrunA17_Chr3g0101601 22.200 509 321 21 40 518 2 465 1.39e-12 70.1
Msa0552770 MtrunA17_Chr8g0344181 23.204 181 127 2 338 518 306 474 1.92e-12 69.7
Msa0552770 MtrunA17_Chr7g0235551 24.903 257 170 6 265 511 226 469 1.92e-12 69.7
Msa0552770 MtrunA17_Chr3g0101761 21.837 490 327 18 50 518 15 469 2.30e-12 69.3
Msa0552770 MtrunA17_Chr5g0408181 22.883 437 279 16 114 545 80 463 3.31e-12 68.9
Msa0552770 MtrunA17_Chr8g0334891 23.881 268 165 9 269 523 220 461 4.40e-12 68.6
Msa0552770 MtrunA17_Chr3g0141801 26.642 274 159 9 282 542 237 481 6.95e-12 67.8
Msa0552770 MtrunA17_Chr1g0205371 23.077 364 251 10 160 518 127 466 1.58e-11 66.6
Msa0552770 MtrunA17_Chr3g0089351 23.529 306 193 10 214 516 102 369 2.05e-11 65.9
Msa0552770 MtrunA17_Chr3g0101831 20.988 486 341 15 46 518 15 470 2.13e-11 66.2
Msa0552770 MtrunA17_Chr6g0449321 33.333 114 65 2 267 369 3 116 2.57e-11 62.0
Msa0552770 MtrunA17_Chr3g0101801 21.341 492 335 15 46 518 18 476 4.13e-11 65.5
Msa0552770 MtrunA17_Chr2g0334021 26.857 175 110 4 340 514 306 462 5.37e-11 65.1
Msa0552770 MtrunA17_Chr3g0101751 21.086 479 340 16 52 518 24 476 7.02e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0552770 AT5G23190.1 70.962 551 153 4 7 553 1 548 0.0 809
Msa0552770 AT5G08250.2 69.203 552 161 4 6 553 2 548 0.0 800
Msa0552770 AT5G08250.1 72.912 491 124 4 67 553 1 486 0.0 753
Msa0552770 AT1G24540.1 45.541 527 272 6 28 546 2 521 1.05e-170 494
Msa0552770 AT3G26125.1 46.061 495 254 5 66 549 44 536 1.31e-159 466
Msa0552770 AT1G63710.1 46.548 507 258 6 46 546 9 508 1.67e-159 466
Msa0552770 AT1G13140.1 43.382 544 285 7 12 549 2 528 2.45e-159 466
Msa0552770 AT1G01600.1 47.600 500 245 8 66 554 29 522 1.42e-156 459
Msa0552770 AT2G45970.1 45.192 520 269 6 44 554 7 519 1.37e-154 453
Msa0552770 AT1G13140.2 42.463 544 264 8 12 549 2 502 2.62e-152 446
Msa0552770 AT4G00360.1 46.493 499 250 8 66 554 29 520 4.41e-152 447
Msa0552770 AT1G13150.1 43.713 501 272 5 55 549 25 521 1.77e-150 442
Msa0552770 AT5G58860.1 44.118 510 256 9 49 545 15 508 7.69e-144 425
Msa0552770 AT2G23180.1 40.421 522 281 11 41 545 4 512 1.01e-137 409
Msa0552770 AT4G39490.1 40.194 515 296 8 41 545 4 516 1.27e-137 409
Msa0552770 AT4G39480.1 40.078 514 295 8 41 545 4 513 1.66e-126 381
Msa0552770 AT1G69500.1 39.887 529 281 10 44 545 5 523 2.39e-125 378
Msa0552770 AT1G34540.1 40.726 496 262 10 60 545 24 497 3.37e-125 377
Msa0552770 AT1G57750.1 38.586 495 272 8 61 545 24 496 1.24e-123 373
Msa0552770 AT2G21910.1 37.702 496 288 7 59 545 23 506 4.30e-122 369
Msa0552770 AT3G56630.1 41.513 489 257 12 66 545 30 498 4.61e-122 369
Msa0552770 AT1G65340.1 37.060 483 279 7 70 544 37 502 1.55e-121 367
Msa0552770 AT2G45510.1 40.562 498 282 10 46 540 17 503 1.53e-116 355
Msa0552770 AT5G52320.1 36.235 494 292 7 58 544 24 501 4.28e-116 353
Msa0552770 AT4G32170.1 36.293 518 311 10 38 548 1 506 1.12e-115 353
Msa0552770 AT5G52320.2 36.401 489 288 7 58 539 24 496 2.81e-115 351
Msa0552770 AT2G44890.1 40.681 499 280 10 46 540 17 503 6.33e-115 351
Msa0552770 AT1G47620.1 36.364 484 288 7 70 545 44 515 1.64e-114 350
Msa0552770 AT3G48520.1 39.388 523 281 12 35 545 1 499 4.30e-112 343
Msa0552770 AT4G39500.2 35.577 520 311 9 37 545 10 516 1.69e-111 342
Msa0552770 AT5G63450.2 38.849 556 289 13 19 549 35 564 2.90e-109 338
Msa0552770 AT5G63450.1 39.734 526 272 12 43 549 7 506 3.68e-109 336
Msa0552770 AT2G44890.2 39.479 499 268 11 46 540 17 485 1.66e-107 331
Msa0552770 AT4G39510.1 34.423 520 320 8 38 548 1 508 9.03e-107 330
Msa0552770 AT2G27690.1 39.485 466 254 9 86 545 51 494 1.28e-106 329
Msa0552770 AT4G39500.1 35.537 484 281 7 75 545 1 466 4.12e-105 324
Msa0552770 AT5G02900.1 34.357 521 287 12 38 545 1 479 2.82e-97 304
Msa0552770 AT1G57750.2 36.580 421 236 7 61 472 24 422 1.03e-96 301
Msa0552770 AT3G01900.1 34.263 502 291 12 55 548 23 493 1.31e-90 287
Msa0552770 AT1G31800.1 25.490 459 301 13 99 545 140 569 5.54e-36 142
Msa0552770 AT3G53130.1 24.850 499 329 16 61 545 73 539 7.45e-36 141
Msa0552770 AT3G14680.1 24.779 452 284 17 109 544 100 511 3.86e-28 118
Msa0552770 AT4G15110.1 23.274 507 312 17 86 545 102 578 5.40e-27 115
Msa0552770 AT3G14650.1 24.000 450 290 17 109 544 100 511 4.64e-26 112
Msa0552770 AT2G26710.1 24.590 427 250 11 143 544 135 514 6.53e-26 112
Msa0552770 AT3G14620.1 23.490 447 293 14 101 537 100 507 6.66e-26 112
Msa0552770 AT3G14640.1 24.414 512 324 20 59 544 39 513 1.02e-25 111
Msa0552770 AT3G14640.2 24.414 512 324 20 59 544 61 535 1.12e-25 111
Msa0552770 AT3G14630.1 25.541 462 295 17 94 544 84 507 1.24e-25 110
Msa0552770 AT5G24900.1 22.799 443 288 12 120 542 116 524 1.58e-25 110
Msa0552770 AT3G14630.2 25.541 462 295 17 94 544 139 562 1.61e-25 111
Msa0552770 AT5G24900.2 23.318 446 276 14 123 542 2 407 2.43e-25 108
Msa0552770 AT3G48270.1 23.923 418 271 12 109 514 70 452 7.69e-25 108
Msa0552770 AT3G14610.1 24.026 462 303 16 94 544 87 511 1.58e-24 107
Msa0552770 AT5G52400.1 24.745 392 268 11 147 538 148 512 2.07e-24 107
Msa0552770 AT3G14660.1 23.937 447 294 15 109 544 100 511 2.78e-24 107
Msa0552770 AT3G14690.1 22.957 514 331 18 57 544 37 511 5.26e-24 106
Msa0552770 AT3G14690.2 22.957 514 331 18 57 544 72 546 5.73e-24 106
Msa0552770 AT4G13310.1 27.864 323 207 7 207 527 172 470 8.33e-24 105
Msa0552770 AT1G33730.1 25.680 331 225 6 192 518 26 339 1.27e-23 103
Msa0552770 AT1G33730.2 25.680 331 225 6 192 518 26 339 1.27e-23 103
Msa0552770 AT4G39950.2 22.140 542 362 16 5 521 39 545 1.30e-23 105
Msa0552770 AT4G13290.1 27.019 322 203 6 207 527 173 463 2.77e-23 103
Msa0552770 AT5G25180.1 22.737 475 314 13 66 525 32 468 3.83e-23 103
Msa0552770 AT4G39950.1 22.037 540 361 16 7 521 1 505 8.50e-23 102
Msa0552770 AT3G48310.1 25.692 253 168 5 272 522 227 461 9.92e-23 102
Msa0552770 AT5G24910.1 23.111 450 285 12 120 545 120 532 1.19e-22 102
Msa0552770 AT5G25120.1 22.938 497 332 13 46 525 6 468 1.45e-22 101
Msa0552770 AT5G57260.1 23.288 438 303 11 115 538 75 493 2.19e-22 101
Msa0552770 AT2G45570.1 23.877 423 286 11 109 518 77 476 2.40e-22 100
Msa0552770 AT2G24180.1 24.615 455 297 15 109 545 75 501 3.52e-22 100
Msa0552770 AT5G38450.1 25.485 412 260 12 144 542 136 513 6.10e-22 99.8
Msa0552770 AT3G48300.1 22.535 426 281 11 109 521 68 457 7.05e-22 99.4
Msa0552770 AT3G48300.2 22.535 426 281 11 109 521 70 459 7.14e-22 99.4
Msa0552770 AT2G45550.1 23.753 421 288 11 109 518 77 475 7.78e-22 99.4
Msa0552770 AT5G25140.1 20.954 482 314 13 66 525 32 468 1.39e-21 98.6
Msa0552770 AT5G07990.1 21.980 505 316 18 44 514 6 466 3.80e-21 97.4
Msa0552770 AT5G05260.2 22.246 472 310 14 70 514 47 488 4.56e-21 97.1
Msa0552770 AT4G37340.1 23.989 371 236 11 152 511 117 452 4.88e-21 97.1
Msa0552770 AT3G26300.1 24.812 399 267 13 150 541 113 485 7.79e-21 96.3
Msa0552770 AT2G30770.1 20.609 427 288 11 109 518 72 464 9.69e-21 95.9
Msa0552770 AT2G46950.1 23.529 442 287 13 114 542 164 567 1.10e-20 96.3
Msa0552770 AT1G33720.4 24.471 331 229 6 192 518 30 343 1.23e-20 94.4
Msa0552770 AT1G33720.3 24.471 331 229 6 192 518 30 343 1.23e-20 94.4
Msa0552770 AT1G33720.5 24.471 331 229 6 192 518 30 343 1.23e-20 94.4
Msa0552770 AT1G33720.1 24.471 331 229 6 192 518 162 475 1.49e-20 95.5
Msa0552770 AT1G64930.1 28.384 229 145 7 317 539 287 502 1.52e-20 95.5
Msa0552770 AT2G25160.1 27.177 379 218 15 153 501 120 470 2.54e-20 94.7
Msa0552770 AT3G61040.1 27.751 209 138 3 307 514 264 460 2.67e-20 94.7
Msa0552770 AT4G37370.1 23.467 375 232 10 152 511 117 451 2.96e-20 94.4
Msa0552770 AT3G26330.1 24.122 427 290 12 109 525 70 472 3.82e-20 94.4
Msa0552770 AT4G37320.1 24.485 388 234 10 137 509 111 454 4.01e-20 94.0
Msa0552770 AT2G22330.2 24.031 516 336 20 2 493 19 502 4.74e-20 94.4
Msa0552770 AT2G45560.1 25.754 431 277 15 106 518 70 475 5.20e-20 94.0
Msa0552770 AT1G13080.1 25.714 385 234 11 150 514 113 465 5.53e-20 93.6
Msa0552770 AT2G45580.2 26.923 260 173 6 263 518 76 322 9.29e-20 91.7
Msa0552770 AT1G66540.1 24.390 369 227 11 158 511 8 339 1.05e-19 91.7
Msa0552770 AT4G37400.1 23.529 408 271 11 158 554 122 499 1.88e-19 92.0
Msa0552770 AT2G45580.1 26.923 260 173 6 263 518 230 476 2.11e-19 92.0
Msa0552770 AT2G22330.1 23.810 504 331 19 11 493 8 479 2.16e-19 92.0
Msa0552770 AT3G25180.1 24.911 281 185 6 257 530 232 493 2.41e-19 91.7
Msa0552770 AT3G26310.1 24.745 392 239 14 150 521 112 467 2.53e-19 91.7
Msa0552770 AT4G37410.1 23.846 390 249 12 158 532 122 478 4.20e-19 90.9
Msa0552770 AT1G64940.1 28.309 272 156 11 289 540 251 503 5.63e-19 90.5
Msa0552770 AT1G66540.2 27.731 238 149 5 274 511 66 280 5.84e-19 88.6
Msa0552770 AT3G26270.1 26.237 465 296 16 71 520 40 472 6.63e-19 90.5
Msa0552770 AT1G33720.2 28.495 186 121 2 333 518 195 368 7.42e-19 89.4
Msa0552770 AT2G46960.2 22.940 449 285 12 115 542 106 514 7.60e-19 90.1
Msa0552770 AT3G48280.1 23.988 321 209 8 207 520 166 458 8.55e-19 90.1
Msa0552770 AT3G14660.2 26.556 241 152 6 311 544 143 365 9.51e-19 88.6
Msa0552770 AT3G48320.1 27.273 253 162 7 272 521 227 460 9.60e-19 89.7
Msa0552770 AT2G27000.1 22.042 431 283 12 131 550 123 511 1.27e-18 89.7
Msa0552770 AT4G27710.1 23.874 444 287 13 115 543 108 515 1.94e-18 89.0
Msa0552770 AT3G48290.1 22.143 420 276 12 109 514 72 454 2.71e-18 88.6
Msa0552770 AT4G13770.1 20.739 487 360 10 38 518 1 467 3.60e-18 88.2
Msa0552770 AT1G67110.1 22.494 409 269 8 144 542 137 507 3.64e-18 88.2
Msa0552770 AT1G16410.1 23.237 482 316 17 66 521 48 501 5.48e-18 87.8
Msa0552770 AT5G25130.1 22.088 498 333 13 46 524 6 467 6.32e-18 87.4
Msa0552770 AT4G12300.1 21.538 520 350 13 41 540 20 501 7.66e-18 87.0
Msa0552770 AT3G26210.1 23.298 382 262 8 153 525 116 475 1.58e-17 86.3
Msa0552770 AT4G37330.1 28.502 207 131 3 305 511 260 449 2.16e-17 85.5
Msa0552770 AT3G26830.1 24.054 370 238 10 158 512 118 459 2.20e-17 85.5
Msa0552770 AT1G16400.1 24.217 479 309 18 66 518 47 497 2.28e-17 85.9
Msa0552770 AT1G11610.2 21.963 428 273 11 109 514 72 460 2.35e-17 85.5
Msa0552770 AT1G11610.1 21.963 428 273 11 109 514 72 460 2.73e-17 85.5
Msa0552770 AT4G31950.1 24.542 273 178 9 272 531 236 493 3.77e-17 85.1
Msa0552770 AT3G28740.1 22.078 385 243 9 152 520 126 469 3.83e-17 85.1
Msa0552770 AT2G46960.1 22.603 438 278 12 126 542 1 398 4.02e-17 84.0
Msa0552770 AT4G12330.1 23.228 254 179 4 272 525 251 488 4.20e-17 84.7
Msa0552770 AT1G13080.2 25.373 335 207 9 196 514 40 347 4.71e-17 83.6
Msa0552770 AT3G48290.2 21.946 442 276 13 109 514 72 480 5.61e-17 84.3
Msa0552770 AT2G42250.1 28.079 203 123 5 332 525 300 488 5.86e-17 84.3
Msa0552770 AT5G05260.1 21.711 456 300 12 70 514 47 456 6.71e-17 84.0
Msa0552770 AT4G31500.1 22.626 495 322 20 43 514 6 462 7.13e-17 84.0
Msa0552770 AT4G31940.1 24.521 261 177 6 272 525 248 495 7.62e-17 84.0
Msa0552770 AT4G37360.1 23.626 364 234 11 158 511 123 452 1.05e-16 83.6
Msa0552770 AT2G27010.1 23.288 365 251 9 190 545 140 484 1.08e-16 83.6
Msa0552770 AT1G13110.1 22.356 416 294 10 109 514 71 467 1.36e-16 83.2
Msa0552770 AT5G57220.1 23.171 410 261 13 108 511 86 447 1.43e-16 83.2
Msa0552770 AT5G42590.1 22.360 483 337 13 50 523 15 468 2.29e-16 82.4
Msa0552770 AT4G37310.1 23.709 426 280 12 106 511 64 464 2.56e-16 82.4
Msa0552770 AT5G24950.1 27.184 206 137 3 311 515 268 461 2.89e-16 82.0
Msa0552770 AT4G12320.1 21.980 505 327 17 46 522 20 485 4.63e-16 81.6
Msa0552770 AT1G64950.1 25.781 256 172 7 291 540 259 502 5.59e-16 81.3
Msa0552770 AT1G66030.1 27.976 168 102 4 41 198 4 162 5.79e-16 76.3
Msa0552770 AT5G36220.1 23.177 384 242 10 158 527 130 474 7.29e-16 80.9
Msa0552770 AT3G03470.1 26.106 226 151 4 328 545 292 509 9.04e-16 80.5
Msa0552770 AT4G22690.1 24.818 274 188 5 265 535 280 538 1.27e-15 80.5
Msa0552770 AT1G01280.1 23.573 403 272 14 109 495 71 453 1.50e-15 80.1
Msa0552770 AT4G22710.1 24.818 274 188 5 265 535 249 507 1.55e-15 80.1
Msa0552770 AT5G06900.1 23.327 493 320 18 46 518 11 465 1.89e-15 79.7
Msa0552770 AT2G12190.1 27.391 230 148 7 317 540 288 504 2.10e-15 79.3
Msa0552770 AT4G31970.1 23.664 262 178 8 272 525 247 494 2.56e-15 79.3
Msa0552770 AT3G20100.1 23.116 398 257 11 112 500 104 461 2.58e-15 79.3
Msa0552770 AT3G26230.1 25.296 253 173 5 272 520 229 469 2.60e-15 79.3
Msa0552770 AT2G30750.1 22.857 245 170 3 272 514 233 460 2.61e-15 79.3
Msa0552770 AT3G26290.2 25.266 376 251 11 157 525 133 485 3.27e-15 79.0
Msa0552770 AT3G26290.1 25.266 376 251 11 157 525 120 472 4.44e-15 78.6
Msa0552770 AT2G02580.1 23.958 384 260 9 150 525 113 472 4.81e-15 78.2
Msa0552770 AT5G67310.1 24.167 360 237 11 158 511 134 463 8.96e-15 77.4
Msa0552770 AT2G23190.1 26.050 238 152 5 274 511 283 496 9.74e-15 77.4
Msa0552770 AT3G20120.2 24.545 330 219 10 177 500 19 324 1.11e-14 76.3
Msa0552770 AT3G20120.3 24.545 330 219 10 177 500 19 324 1.11e-14 76.3
Msa0552770 AT3G20120.1 24.545 330 219 10 177 500 19 324 1.11e-14 76.3
Msa0552770 AT3G20120.4 24.848 330 218 10 177 500 155 460 1.29e-14 77.0
Msa0552770 AT4G37430.1 23.098 368 239 12 158 511 119 456 1.57e-14 76.6
Msa0552770 AT2G26170.1 22.575 536 359 19 37 545 15 521 1.96e-14 76.6
Msa0552770 AT2G26170.2 23.333 420 272 15 151 545 44 438 2.03e-14 76.3
Msa0552770 AT3G20130.1 28.641 206 127 5 302 500 269 461 2.78e-14 75.9
Msa0552770 AT1G12740.1 25.194 258 178 7 288 545 228 470 3.05e-14 75.9
Msa0552770 AT1G12740.2 25.194 258 178 7 288 545 234 476 3.43e-14 75.5
Msa0552770 AT3G20130.2 28.641 206 127 5 302 500 241 433 3.50e-14 75.5
Msa0552770 AT1G11680.1 23.675 283 191 7 269 545 222 485 4.69e-14 75.1
Msa0552770 AT4G12310.1 21.481 270 193 6 272 535 246 502 5.35e-14 75.1
Msa0552770 AT4G15330.1 30.108 186 111 6 320 500 284 455 5.45e-14 75.1
Msa0552770 AT4G15330.2 30.108 186 111 6 320 500 256 427 5.65e-14 75.1
Msa0552770 AT3G20960.1 26.423 246 160 6 302 539 166 398 5.98e-14 74.3
Msa0552770 AT4G36220.1 27.660 188 122 5 332 518 309 483 6.05e-14 75.1
Msa0552770 AT5G09970.1 24.291 247 152 7 299 540 314 530 6.40e-14 75.1
Msa0552770 AT5G36220.2 22.619 336 215 7 202 527 28 328 7.16e-14 73.6
Msa0552770 AT2G32440.2 22.083 480 323 16 46 517 24 460 8.73e-14 74.3
Msa0552770 AT2G32440.1 22.083 480 323 16 46 517 24 460 8.73e-14 74.3
Msa0552770 AT3G20960.2 26.423 246 160 6 302 539 269 501 9.01e-14 74.3
Msa0552770 AT2G25160.2 27.090 299 168 11 153 428 120 391 1.44e-13 73.2
Msa0552770 AT3G50660.1 23.575 386 225 10 177 521 134 490 1.93e-13 73.2
Msa0552770 AT4G15350.1 26.446 242 154 8 308 539 269 496 2.97e-13 72.8
Msa0552770 AT5G06905.1 26.236 263 163 8 266 511 224 472 3.03e-13 72.8
Msa0552770 AT5G35715.1 21.602 412 268 13 121 514 26 400 3.97e-13 72.0
Msa0552770 AT5G24960.1 25.703 249 168 4 281 522 231 469 4.97e-13 72.0
Msa0552770 AT5G10600.1 22.008 259 181 5 282 534 250 493 6.32e-13 71.6
Msa0552770 AT1G13090.2 21.330 361 235 10 153 495 113 442 6.70e-13 71.6
Msa0552770 AT1G19630.1 24.046 262 180 6 284 545 233 475 9.17e-13 71.2
Msa0552770 AT4G15380.1 24.528 265 174 8 285 540 252 499 1.42e-12 70.5
Msa0552770 AT3G20080.2 24.096 249 167 6 302 541 270 505 3.25e-12 69.3
Msa0552770 AT3G20080.1 24.096 249 167 6 302 541 270 505 3.25e-12 69.3
Msa0552770 AT3G20080.4 24.194 248 166 6 302 540 133 367 4.52e-12 68.6
Msa0552770 AT3G20080.5 24.194 248 166 6 302 540 133 367 4.52e-12 68.6
Msa0552770 AT3G20080.6 24.194 248 166 6 302 540 133 367 4.52e-12 68.6
Msa0552770 AT3G20080.3 24.194 248 166 6 302 540 133 367 4.52e-12 68.6
Msa0552770 AT5G10610.1 22.131 244 171 4 282 520 234 463 4.92e-12 68.9
Msa0552770 AT3G52970.1 25.135 370 241 13 160 514 129 477 7.23e-12 68.6
Msa0552770 AT3G52970.2 28.000 275 172 9 253 514 230 491 9.58e-12 68.2
Msa0552770 AT1G11600.1 25.214 234 150 8 322 545 291 509 1.03e-11 67.8
Msa0552770 AT3G44250.1 24.302 358 228 12 153 495 113 442 1.12e-11 67.8
Msa0552770 AT1G01190.2 24.675 231 136 7 299 523 314 512 1.75e-11 67.4
Msa0552770 AT1G01190.1 24.675 231 136 7 299 523 309 507 1.75e-11 67.4
Msa0552770 AT5G51900.1 33.071 127 76 3 255 372 3 129 1.89e-11 64.7
Msa0552770 AT3G26180.2 21.514 251 177 4 275 521 104 338 5.96e-11 64.7
Msa0552770 AT3G26220.1 25.461 271 179 7 257 520 218 472 8.28e-11 65.1
Msa0552770 AT5G45340.2 25.610 246 157 8 276 521 220 439 9.97e-11 64.7

Find 101 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAAAATTCTTTGATATTT+AGG 0.128148 4_1:-49450205 Msa0552770:CDS
GACATTCTTAACAAACAAAA+TGG 0.214663 4_1:-49451088 Msa0552770:CDS
AAAGTTGATATTGGATGATT+TGG 0.222544 4_1:+49451360 None:intergenic
ACCATCATGGCCTACCTATT+TGG 0.226608 4_1:-49451177 Msa0552770:CDS
CAATGAGAATTTCTAGGATT+TGG 0.234779 4_1:+49451242 None:intergenic
TTTAGGGAAGTTAATGAATT+TGG 0.238762 4_1:+49450979 None:intergenic
CTTCTTTAATCAATGGTCTA+AGG 0.262886 4_1:-49451135 Msa0552770:CDS
TTTCTGAAGTAAGGTCCTTT+AGG 0.275375 4_1:+49450962 None:intergenic
TAGATGAATCCGTTGATAAA+AGG 0.279914 4_1:-49450778 Msa0552770:CDS
AAACTCAAGAAATCAATTAA+AGG 0.291410 4_1:-49450539 Msa0552770:CDS
AAAGCAATCTTTGGCTCAAC+AGG 0.305525 4_1:+49449027 None:intergenic
TACATAGTTAAAGCAATCTT+TGG 0.310424 4_1:+49449018 None:intergenic
TTCTGAAGTAAGGTCCTTTA+GGG 0.311837 4_1:+49450963 None:intergenic
AAACACTTGGATTTGATCAT+TGG 0.316459 4_1:-49448940 Msa0552770:CDS
TGTTTGAGCTTGTTCATTCA+AGG 0.319689 4_1:-49450814 Msa0552770:CDS
GGAGGAGGTAAAGTTGATAT+TGG 0.320033 4_1:+49451351 None:intergenic
GGCGAGAGGGGAGGAGGAGG+AGG 0.341636 4_1:+49451324 None:intergenic
GGCGGACCTCGTTTATGTTT+AGG 0.350208 4_1:-49449132 Msa0552770:CDS
ATACCAAGAAAAGGCCAAAT+AGG 0.359380 4_1:+49451163 None:intergenic
AACTCAAGAAATCAATTAAA+GGG 0.359814 4_1:-49450538 Msa0552770:CDS
GGCGGCGAGAGGGGAGGAGG+AGG 0.373296 4_1:+49451321 None:intergenic
ACCATTTGCAAAAGCCTTTG+AGG 0.375179 4_1:-49450648 Msa0552770:CDS
AAGTTGATATTGGATGATTT+GGG 0.376781 4_1:+49451361 None:intergenic
TAATTGCAATGAGAATTTCT+AGG 0.377517 4_1:+49451236 None:intergenic
TTGTTTAGTACTGTTCCATC+TGG 0.379233 4_1:+49449300 None:intergenic
AGATATTAGAAGAGATATGC+AGG 0.382074 4_1:-49450265 Msa0552770:CDS
AGTTGTTAAATTTCTGAACT+TGG 0.386731 4_1:+49450844 None:intergenic
ATGTTACCTTCTTTAATCAA+TGG 0.388309 4_1:-49451142 Msa0552770:CDS
ATTACCTCTTTGTGATCAAC+AGG 0.393894 4_1:+49450110 None:intergenic
CTTACCATGTTTCTGAAGTA+AGG 0.394013 4_1:+49450953 None:intergenic
CTTCTTCTGTGGCTTTGAGC+TGG 0.398694 4_1:-49450328 Msa0552770:CDS
TGCGGCGGCGAGAGGGGAGG+AGG 0.401010 4_1:+49451318 None:intergenic
GGAGGAGGAGGAGTTGGAGG+AGG 0.405536 4_1:+49451336 None:intergenic
TCGTTATGCCTACGTGTGTT+TGG 0.410569 4_1:-49450598 Msa0552770:CDS
GGATTTGGATGTCTTGTAAG+AGG 0.410728 4_1:+49451257 None:intergenic
TGGGAAGAATGGAAAGCATA+TGG 0.426609 4_1:-49449245 Msa0552770:CDS
TCAACGGATTCATCTAAAAC+AGG 0.432333 4_1:+49450785 None:intergenic
ATCTATGCAATTTATGCAAT+GGG 0.438034 4_1:-49449264 Msa0552770:CDS
CTTAGACCATTGATTAAAGA+AGG 0.442941 4_1:+49451136 None:intergenic
TACAAATTCACAGCATTCAA+TGG 0.464413 4_1:-49449153 Msa0552770:CDS
GAATCAAAGTTAATCTCTAT+AGG 0.465195 4_1:-49448984 Msa0552770:CDS
GCCAAATAGGTAGGCCATGA+TGG 0.469717 4_1:+49451176 None:intergenic
AATGTTTGTATGATAGCTTT+TGG 0.477452 4_1:-49450710 Msa0552770:CDS
AAATTCATTAACTTCCCTAA+AGG 0.487086 4_1:-49450977 Msa0552770:CDS
TAAGGACCAACTTGTATGAA+TGG 0.487625 4_1:-49451117 Msa0552770:CDS
TTGAAGTTTGCGGCGGCGAG+AGG 0.492564 4_1:+49451310 None:intergenic
GAAGGTAACATACCAAGAAA+AGG 0.499568 4_1:+49451154 None:intergenic
ATGAAGATGAAGGATGAGAA+TGG 0.504654 4_1:-49450416 Msa0552770:CDS
GGCTTCTGTTGCATCCTCAA+AGG 0.505178 4_1:+49450634 None:intergenic
GGGAAGAATGGAAAGCATAT+GGG 0.505993 4_1:-49449244 Msa0552770:CDS
GATCTATGCAATTTATGCAA+TGG 0.508138 4_1:-49449265 Msa0552770:CDS
TGTTTAGTACTGTTCCATCT+GGG 0.509067 4_1:+49449301 None:intergenic
ACATTCTTAACAAACAAAAT+GGG 0.512924 4_1:-49451087 Msa0552770:CDS
CATGTTGAAGTTGAAGTTTG+CGG 0.513441 4_1:+49451300 None:intergenic
CAGTTGAGGCTGCTGAAAGA+AGG 0.519538 4_1:+49451046 None:intergenic
AATTTATGCAATGGGAAGAA+TGG 0.520541 4_1:-49449256 Msa0552770:CDS
TTCATGAGGCTTCTCAACTT+AGG 0.524745 4_1:-49450572 Msa0552770:CDS
AATTTGCAATGAATGTCATA+AGG 0.524863 4_1:-49450508 Msa0552770:CDS
TCAAAGTTAATCTCTATAGG+AGG 0.529232 4_1:-49448981 Msa0552770:CDS
TGAAGTTTGCGGCGGCGAGA+GGG 0.541841 4_1:+49451311 None:intergenic
CCAGAAAGGTGGTTAAAAGA+TGG 0.544625 4_1:-49449198 Msa0552770:CDS
CTTACTTCAGAAACATGGTA+AGG 0.546746 4_1:-49450952 Msa0552770:CDS
CGTGTGTTTGGAAGTTCATG+AGG 0.548576 4_1:-49450586 Msa0552770:CDS
TAGATATCATGTGAAGGTGG+TGG 0.550069 4_1:-49449058 Msa0552770:CDS
AGAAGGTGTTCGAGGTTTCG+AGG 0.550340 4_1:+49451007 None:intergenic
TTGTGATCAACAGGAACAGA+AGG 0.552797 4_1:+49450119 None:intergenic
TTAACTATGTATATGAAGCA+TGG 0.553220 4_1:-49449006 Msa0552770:CDS
AACATGGTAAGGGACTTACT+TGG 0.571979 4_1:-49450941 Msa0552770:CDS
GAAGTTTGCGGCGGCGAGAG+GGG 0.572455 4_1:+49451312 None:intergenic
TGGGAGGGATACTTCTTCTG+TGG 0.572902 4_1:-49450339 Msa0552770:CDS
GTTTGCGGCGGCGAGAGGGG+AGG 0.574299 4_1:+49451315 None:intergenic
GTAAGGGACTTACTTGGAGA+TGG 0.574661 4_1:-49450935 Msa0552770:CDS
TGTGATCCATTCATACAAGT+TGG 0.574938 4_1:+49451111 None:intergenic
TGTTCCTGTTGATCACAAAG+AGG 0.575394 4_1:-49450114 Msa0552770:intron
GATTTGGATGTCTTGTAAGA+GGG 0.576722 4_1:+49451258 None:intergenic
CAGAAGTGACTATGCAGTTG+AGG 0.581939 4_1:+49451032 None:intergenic
CAAGAAAAGGCCAAATAGGT+AGG 0.593842 4_1:+49451167 None:intergenic
GATATTGGATGATTTGGGCA+TGG 0.595317 4_1:+49451366 None:intergenic
TATGCAGGGTGGTGAGTCAG+AGG 0.603239 4_1:-49450250 Msa0552770:CDS
GATATTAGAAGAGATATGCA+GGG 0.605485 4_1:-49450264 Msa0552770:CDS
GCAGAGAGTTTAAACCAGAA+AGG 0.607484 4_1:-49449212 Msa0552770:CDS
CAAAGTTAATCTCTATAGGA+GGG 0.610343 4_1:-49448980 Msa0552770:CDS
GGAAGAATGGAAAGCATATG+GGG 0.611145 4_1:-49449243 Msa0552770:CDS
GAGGATGATATATTCCCAGA+TGG 0.619133 4_1:-49449315 Msa0552770:CDS
ACTCAAGAAATCAATTAAAG+GGG 0.621840 4_1:-49450537 Msa0552770:CDS
TGATCAGAATCATGAAGTGG+AGG 0.622187 4_1:-49450291 Msa0552770:CDS
TGAGGATGCAACAGAAGCCA+CGG 0.626202 4_1:-49450630 Msa0552770:CDS
GAGAGTTTAAACCAGAAAGG+TGG 0.628737 4_1:-49449209 Msa0552770:CDS
TTACTTCAGAAACATGGTAA+GGG 0.633348 4_1:-49450951 Msa0552770:CDS
AAGCAATCTTTGGCTCAACA+GGG 0.640107 4_1:+49449028 None:intergenic
CATATATAGATATCATGTGA+AGG 0.640913 4_1:-49449064 Msa0552770:CDS
GATGGAACAGTACTAAACAA+AGG 0.651846 4_1:-49449297 Msa0552770:CDS
AGGACCTTACTTCAGAAACA+TGG 0.653411 4_1:-49450957 Msa0552770:CDS
TGTGATCAACAGGAACAGAA+GGG 0.659797 4_1:+49450120 None:intergenic
ATATAGATATCATGTGAAGG+TGG 0.665088 4_1:-49449061 Msa0552770:CDS
GCTTGATCAGAATCATGAAG+TGG 0.668175 4_1:-49450294 Msa0552770:CDS
ATTAGAAGAGATATGCAGGG+TGG 0.678701 4_1:-49450261 Msa0552770:CDS
GTTGAAGTTGAAGTTTGCGG+CGG 0.684473 4_1:+49451303 None:intergenic
AAATTCACAGCATTCAATGG+CGG 0.716617 4_1:-49449150 Msa0552770:CDS
CATAACGAAACGAAGCACCG+TGG 0.738041 4_1:+49450613 None:intergenic
ATGAACTTCCAAACACACGT+AGG 0.753787 4_1:+49450590 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAAAATTCTTTGATATTT+AGG - chr4_1:49450095-49450114 Msa0552770:intron 15.0%
!! TTGAAAATTCTTTGATATTT+AGG - chr4_1:49450095-49450114 Msa0552770:intron 15.0%
!! ACATTCTTAACAAACAAAAT+GGG - chr4_1:49449213-49449232 Msa0552770:CDS 20.0%
!! AAACTCAAGAAATCAATTAA+AGG - chr4_1:49449761-49449780 Msa0552770:intron 20.0%
!! AACTCAAGAAATCAATTAAA+GGG - chr4_1:49449762-49449781 Msa0552770:intron 20.0%
!!! TTATTCAGATAAGTTTTTGA+GGG - chr4_1:49449913-49449932 Msa0552770:intron 20.0%
!!! GAAACATCCATTTTTATAAA+AGG + chr4_1:49450628-49450647 None:intergenic 20.0%
!!! TTCTATTAAATACTCTAAAG+TGG - chr4_1:49450645-49450664 Msa0552770:CDS 20.0%
!!! ATAAATGTATGACTTTTTGT+AGG - chr4_1:49450957-49450976 Msa0552770:CDS 20.0%
!! ACATTCTTAACAAACAAAAT+GGG - chr4_1:49449213-49449232 Msa0552770:CDS 20.0%
!! AAACTCAAGAAATCAATTAA+AGG - chr4_1:49449761-49449780 Msa0552770:intron 20.0%
!! AACTCAAGAAATCAATTAAA+GGG - chr4_1:49449762-49449781 Msa0552770:intron 20.0%
!!! TTATTCAGATAAGTTTTTGA+GGG - chr4_1:49449913-49449932 Msa0552770:intron 20.0%
!!! GAAACATCCATTTTTATAAA+AGG + chr4_1:49450628-49450647 None:intergenic 20.0%
!!! TTCTATTAAATACTCTAAAG+TGG - chr4_1:49450645-49450664 Msa0552770:CDS 20.0%
!!! ATAAATGTATGACTTTTTGT+AGG - chr4_1:49450957-49450976 Msa0552770:CDS 20.0%
!!! AAGTTGATATTGGATGATTT+GGG + chr4_1:49448942-49448961 None:intergenic 25.0%
!!! AAAGTTGATATTGGATGATT+TGG + chr4_1:49448943-49448962 None:intergenic 25.0%
! TAATTGCAATGAGAATTTCT+AGG + chr4_1:49449067-49449086 None:intergenic 25.0%
! ATGTTACCTTCTTTAATCAA+TGG - chr4_1:49449158-49449177 Msa0552770:CDS 25.0%
! GACATTCTTAACAAACAAAA+TGG - chr4_1:49449212-49449231 Msa0552770:CDS 25.0%
!!! TAATGAATTTGGTTTTGAGA+AGG + chr4_1:49449313-49449332 None:intergenic 25.0%
! TTTAGGGAAGTTAATGAATT+TGG + chr4_1:49449324-49449343 None:intergenic 25.0%
! AAATTCATTAACTTCCCTAA+AGG - chr4_1:49449323-49449342 Msa0552770:CDS 25.0%
! AGTTGTTAAATTTCTGAACT+TGG + chr4_1:49449459-49449478 None:intergenic 25.0%
!! AATGTTTGTATGATAGCTTT+TGG - chr4_1:49449590-49449609 Msa0552770:intron 25.0%
! ACTCAAGAAATCAATTAAAG+GGG - chr4_1:49449763-49449782 Msa0552770:intron 25.0%
! AATTTGCAATGAATGTCATA+AGG - chr4_1:49449792-49449811 Msa0552770:intron 25.0%
!!! AACTGTTTTTATGAAGATGA+AGG - chr4_1:49449874-49449893 Msa0552770:intron 25.0%
!! CTTATTCAGATAAGTTTTTG+AGG - chr4_1:49449912-49449931 Msa0552770:intron 25.0%
!! TTATACTAGTTTGGATTAGA+AGG + chr4_1:49450246-49450265 None:intergenic 25.0%
! TGAGTGATATTATACTAGTT+TGG + chr4_1:49450255-49450274 None:intergenic 25.0%
! TTTCAAATTATTAGCTGTGT+CGG + chr4_1:49450334-49450353 None:intergenic 25.0%
! ATTGAAATTGATATGAAGCA+CGG + chr4_1:49450432-49450451 None:intergenic 25.0%
! TTAAAAATCCACAATCGAAA+AGG + chr4_1:49450476-49450495 None:intergenic 25.0%
!! CTACGTACCTTTTATAAAAA+TGG - chr4_1:49450618-49450637 Msa0552770:CDS 25.0%
! GTTGACAAAAGAATAATTGT+AGG + chr4_1:49450684-49450703 None:intergenic 25.0%
! ATCTATGCAATTTATGCAAT+GGG - chr4_1:49451036-49451055 Msa0552770:CDS 25.0%
! CATATATAGATATCATGTGA+AGG - chr4_1:49451236-49451255 Msa0552770:CDS 25.0%
! TACATAGTTAAAGCAATCTT+TGG + chr4_1:49451285-49451304 None:intergenic 25.0%
! TTAACTATGTATATGAAGCA+TGG - chr4_1:49451294-49451313 Msa0552770:CDS 25.0%
! GAATCAAAGTTAATCTCTAT+AGG - chr4_1:49451316-49451335 Msa0552770:CDS 25.0%
!!! AAGTTGATATTGGATGATTT+GGG + chr4_1:49448942-49448961 None:intergenic 25.0%
!!! AAAGTTGATATTGGATGATT+TGG + chr4_1:49448943-49448962 None:intergenic 25.0%
! TAATTGCAATGAGAATTTCT+AGG + chr4_1:49449067-49449086 None:intergenic 25.0%
! ATGTTACCTTCTTTAATCAA+TGG - chr4_1:49449158-49449177 Msa0552770:CDS 25.0%
! GACATTCTTAACAAACAAAA+TGG - chr4_1:49449212-49449231 Msa0552770:CDS 25.0%
!!! TAATGAATTTGGTTTTGAGA+AGG + chr4_1:49449313-49449332 None:intergenic 25.0%
! TTTAGGGAAGTTAATGAATT+TGG + chr4_1:49449324-49449343 None:intergenic 25.0%
! AAATTCATTAACTTCCCTAA+AGG - chr4_1:49449323-49449342 Msa0552770:CDS 25.0%
! AGTTGTTAAATTTCTGAACT+TGG + chr4_1:49449459-49449478 None:intergenic 25.0%
!! AATGTTTGTATGATAGCTTT+TGG - chr4_1:49449590-49449609 Msa0552770:intron 25.0%
! ACTCAAGAAATCAATTAAAG+GGG - chr4_1:49449763-49449782 Msa0552770:intron 25.0%
! AATTTGCAATGAATGTCATA+AGG - chr4_1:49449792-49449811 Msa0552770:intron 25.0%
!!! AACTGTTTTTATGAAGATGA+AGG - chr4_1:49449874-49449893 Msa0552770:intron 25.0%
!! CTTATTCAGATAAGTTTTTG+AGG - chr4_1:49449912-49449931 Msa0552770:intron 25.0%
!! TTATACTAGTTTGGATTAGA+AGG + chr4_1:49450246-49450265 None:intergenic 25.0%
! TGAGTGATATTATACTAGTT+TGG + chr4_1:49450255-49450274 None:intergenic 25.0%
! TTTCAAATTATTAGCTGTGT+CGG + chr4_1:49450334-49450353 None:intergenic 25.0%
! ATTGAAATTGATATGAAGCA+CGG + chr4_1:49450432-49450451 None:intergenic 25.0%
! TTAAAAATCCACAATCGAAA+AGG + chr4_1:49450476-49450495 None:intergenic 25.0%
!! CTACGTACCTTTTATAAAAA+TGG - chr4_1:49450618-49450637 Msa0552770:CDS 25.0%
! GTTGACAAAAGAATAATTGT+AGG + chr4_1:49450684-49450703 None:intergenic 25.0%
! ATCTATGCAATTTATGCAAT+GGG - chr4_1:49451036-49451055 Msa0552770:CDS 25.0%
! CATATATAGATATCATGTGA+AGG - chr4_1:49451236-49451255 Msa0552770:CDS 25.0%
! TACATAGTTAAAGCAATCTT+TGG + chr4_1:49451285-49451304 None:intergenic 25.0%
! TTAACTATGTATATGAAGCA+TGG - chr4_1:49451294-49451313 Msa0552770:CDS 25.0%
! GAATCAAAGTTAATCTCTAT+AGG - chr4_1:49451316-49451335 Msa0552770:CDS 25.0%
!! CAATGAGAATTTCTAGGATT+TGG + chr4_1:49449061-49449080 None:intergenic 30.0%
CTTAGACAAAAAAACCATCA+TGG - chr4_1:49449110-49449129 Msa0552770:CDS 30.0%
! CTTAGACCATTGATTAAAGA+AGG + chr4_1:49449167-49449186 None:intergenic 30.0%
CTTCTTTAATCAATGGTCTA+AGG - chr4_1:49449165-49449184 Msa0552770:CDS 30.0%
! AATGGGACTTTTAGATTCAA+AGG - chr4_1:49449230-49449249 Msa0552770:CDS 30.0%
TTACTTCAGAAACATGGTAA+GGG - chr4_1:49449349-49449368 Msa0552770:intron 30.0%
! TAGATGAATCCGTTGATAAA+AGG - chr4_1:49449522-49449541 Msa0552770:intron 30.0%
! AGTGACAATCCTTTTATCAA+CGG + chr4_1:49449534-49449553 None:intergenic 30.0%
TGTCATAAGGACTAGAAAAA+AGG - chr4_1:49449805-49449824 Msa0552770:intron 30.0%
TAGAAAAAAGGAACTGTCTT+TGG - chr4_1:49449817-49449836 Msa0552770:intron 30.0%
! TGTGTGAATTTTATACTAGC+TGG - chr4_1:49449941-49449960 Msa0552770:intron 30.0%
! GTGTGAATTTTATACTAGCT+GGG - chr4_1:49449942-49449961 Msa0552770:intron 30.0%
AGATATTAGAAGAGATATGC+AGG - chr4_1:49450035-49450054 Msa0552770:intron 30.0%
GATATTAGAAGAGATATGCA+GGG - chr4_1:49450036-49450055 Msa0552770:intron 30.0%
! TCCATCTTTTTAATCTCTTC+AGG + chr4_1:49450121-49450140 None:intergenic 30.0%
! AGTTTGGATTAGAAGGAAAA+AGG + chr4_1:49450239-49450258 None:intergenic 30.0%
TTCAGTGTAATTACAAGTGT+CGG - chr4_1:49450365-49450384 Msa0552770:CDS 30.0%
! ATTGTGACAGAAGATTAGTT+AGG + chr4_1:49450716-49450735 None:intergenic 30.0%
GCAATAGAGTCAAATTGTAT+AGG - chr4_1:49450810-49450829 Msa0552770:CDS 30.0%
! TTGTAATTGACAGATTTTCC+AGG + chr4_1:49450846-49450865 None:intergenic 30.0%
CATTTATTGAACATGCTCAA+TGG + chr4_1:49450944-49450963 None:intergenic 30.0%
GATCTATGCAATTTATGCAA+TGG - chr4_1:49451035-49451054 Msa0552770:CDS 30.0%
AATTTATGCAATGGGAAGAA+TGG - chr4_1:49451044-49451063 Msa0552770:CDS 30.0%
TACAAATTCACAGCATTCAA+TGG - chr4_1:49451147-49451166 Msa0552770:CDS 30.0%
! TCTTTTCCTAAACATAAACG+AGG + chr4_1:49451177-49451196 None:intergenic 30.0%
ATATAGATATCATGTGAAGG+TGG - chr4_1:49451239-49451258 Msa0552770:CDS 30.0%
TCAAAGTTAATCTCTATAGG+AGG - chr4_1:49451319-49451338 Msa0552770:CDS 30.0%
CAAAGTTAATCTCTATAGGA+GGG - chr4_1:49451320-49451339 Msa0552770:CDS 30.0%
TGCTGAAATTCAAAAACACT+TGG - chr4_1:49451347-49451366 Msa0552770:CDS 30.0%
AAACACTTGGATTTGATCAT+TGG - chr4_1:49451360-49451379 Msa0552770:CDS 30.0%
!! CAATGAGAATTTCTAGGATT+TGG + chr4_1:49449061-49449080 None:intergenic 30.0%
CTTAGACAAAAAAACCATCA+TGG - chr4_1:49449110-49449129 Msa0552770:CDS 30.0%
! CTTAGACCATTGATTAAAGA+AGG + chr4_1:49449167-49449186 None:intergenic 30.0%
CTTCTTTAATCAATGGTCTA+AGG - chr4_1:49449165-49449184 Msa0552770:CDS 30.0%
! AATGGGACTTTTAGATTCAA+AGG - chr4_1:49449230-49449249 Msa0552770:CDS 30.0%
TTACTTCAGAAACATGGTAA+GGG - chr4_1:49449349-49449368 Msa0552770:intron 30.0%
! TAGATGAATCCGTTGATAAA+AGG - chr4_1:49449522-49449541 Msa0552770:intron 30.0%
! AGTGACAATCCTTTTATCAA+CGG + chr4_1:49449534-49449553 None:intergenic 30.0%
TGTCATAAGGACTAGAAAAA+AGG - chr4_1:49449805-49449824 Msa0552770:intron 30.0%
TAGAAAAAAGGAACTGTCTT+TGG - chr4_1:49449817-49449836 Msa0552770:intron 30.0%
! TGTGTGAATTTTATACTAGC+TGG - chr4_1:49449941-49449960 Msa0552770:intron 30.0%
! GTGTGAATTTTATACTAGCT+GGG - chr4_1:49449942-49449961 Msa0552770:intron 30.0%
AGATATTAGAAGAGATATGC+AGG - chr4_1:49450035-49450054 Msa0552770:intron 30.0%
GATATTAGAAGAGATATGCA+GGG - chr4_1:49450036-49450055 Msa0552770:intron 30.0%
! TCCATCTTTTTAATCTCTTC+AGG + chr4_1:49450121-49450140 None:intergenic 30.0%
! AGTTTGGATTAGAAGGAAAA+AGG + chr4_1:49450239-49450258 None:intergenic 30.0%
TTCAGTGTAATTACAAGTGT+CGG - chr4_1:49450365-49450384 Msa0552770:CDS 30.0%
! ATTGTGACAGAAGATTAGTT+AGG + chr4_1:49450716-49450735 None:intergenic 30.0%
GCAATAGAGTCAAATTGTAT+AGG - chr4_1:49450810-49450829 Msa0552770:CDS 30.0%
! TTGTAATTGACAGATTTTCC+AGG + chr4_1:49450846-49450865 None:intergenic 30.0%
CATTTATTGAACATGCTCAA+TGG + chr4_1:49450944-49450963 None:intergenic 30.0%
GATCTATGCAATTTATGCAA+TGG - chr4_1:49451035-49451054 Msa0552770:CDS 30.0%
AATTTATGCAATGGGAAGAA+TGG - chr4_1:49451044-49451063 Msa0552770:CDS 30.0%
TACAAATTCACAGCATTCAA+TGG - chr4_1:49451147-49451166 Msa0552770:CDS 30.0%
! TCTTTTCCTAAACATAAACG+AGG + chr4_1:49451177-49451196 None:intergenic 30.0%
ATATAGATATCATGTGAAGG+TGG - chr4_1:49451239-49451258 Msa0552770:CDS 30.0%
TCAAAGTTAATCTCTATAGG+AGG - chr4_1:49451319-49451338 Msa0552770:CDS 30.0%
CAAAGTTAATCTCTATAGGA+GGG - chr4_1:49451320-49451339 Msa0552770:CDS 30.0%
TGCTGAAATTCAAAAACACT+TGG - chr4_1:49451347-49451366 Msa0552770:CDS 30.0%
AAACACTTGGATTTGATCAT+TGG - chr4_1:49451360-49451379 Msa0552770:CDS 30.0%
CATGTTGAAGTTGAAGTTTG+CGG + chr4_1:49449003-49449022 None:intergenic 35.0%
GATTTGGATGTCTTGTAAGA+GGG + chr4_1:49449045-49449064 None:intergenic 35.0%
ATACCAAGAAAAGGCCAAAT+AGG + chr4_1:49449140-49449159 None:intergenic 35.0%
GAAGGTAACATACCAAGAAA+AGG + chr4_1:49449149-49449168 None:intergenic 35.0%
TAAGGACCAACTTGTATGAA+TGG - chr4_1:49449183-49449202 Msa0552770:CDS 35.0%
TGTGATCCATTCATACAAGT+TGG + chr4_1:49449192-49449211 None:intergenic 35.0%
!! TTCTGAAGTAAGGTCCTTTA+GGG + chr4_1:49449340-49449359 None:intergenic 35.0%
!! TTTCTGAAGTAAGGTCCTTT+AGG + chr4_1:49449341-49449360 None:intergenic 35.0%
!! CTTACCATGTTTCTGAAGTA+AGG + chr4_1:49449350-49449369 None:intergenic 35.0%
CTTACTTCAGAAACATGGTA+AGG - chr4_1:49449348-49449367 Msa0552770:intron 35.0%
! TGTTTGAGCTTGTTCATTCA+AGG - chr4_1:49449486-49449505 Msa0552770:intron 35.0%
! TCAACGGATTCATCTAAAAC+AGG + chr4_1:49449518-49449537 None:intergenic 35.0%
!! AGTTTTTGACTCAAACAACC+AGG + chr4_1:49449623-49449642 None:intergenic 35.0%
! GCTTTTGCAAATGGTATTTC+AGG + chr4_1:49449647-49449666 None:intergenic 35.0%
ATGAAGATGAAGGATGAGAA+TGG - chr4_1:49449884-49449903 Msa0552770:intron 35.0%
! TGAATTTTATACTAGCTGGG+AGG - chr4_1:49449945-49449964 Msa0552770:intron 35.0%
! GAATTTTATACTAGCTGGGA+GGG - chr4_1:49449946-49449965 Msa0552770:intron 35.0%
GCCTGAAGAGATTAAAAAGA+TGG - chr4_1:49450117-49450136 Msa0552770:CDS 35.0%
ATTACCTCTTTGTGATCAAC+AGG + chr4_1:49450193-49450212 None:intergenic 35.0%
! TCTCTATTCCTTTTCGATTG+TGG - chr4_1:49450465-49450484 Msa0552770:CDS 35.0%
! AAGATTAGTTAGGCAAACAG+TGG + chr4_1:49450706-49450725 None:intergenic 35.0%
! AATTGACAGATTTTCCAGGT+TGG + chr4_1:49450842-49450861 None:intergenic 35.0%
GTCATATTAAATGCACCTAG+TGG - chr4_1:49450885-49450904 Msa0552770:CDS 35.0%
! TGACTTTTTGTAGGTAGTTG+AGG - chr4_1:49450966-49450985 Msa0552770:CDS 35.0%
TGTTTAGTACTGTTCCATCT+GGG + chr4_1:49451002-49451021 None:intergenic 35.0%
TTGTTTAGTACTGTTCCATC+TGG + chr4_1:49451003-49451022 None:intergenic 35.0%
GATGGAACAGTACTAAACAA+AGG - chr4_1:49451003-49451022 Msa0552770:CDS 35.0%
AAATTCACAGCATTCAATGG+CGG - chr4_1:49451150-49451169 Msa0552770:CDS 35.0%
CATGTTGAAGTTGAAGTTTG+CGG + chr4_1:49449003-49449022 None:intergenic 35.0%
GATTTGGATGTCTTGTAAGA+GGG + chr4_1:49449045-49449064 None:intergenic 35.0%
ATACCAAGAAAAGGCCAAAT+AGG + chr4_1:49449140-49449159 None:intergenic 35.0%
GAAGGTAACATACCAAGAAA+AGG + chr4_1:49449149-49449168 None:intergenic 35.0%
TAAGGACCAACTTGTATGAA+TGG - chr4_1:49449183-49449202 Msa0552770:CDS 35.0%
TGTGATCCATTCATACAAGT+TGG + chr4_1:49449192-49449211 None:intergenic 35.0%
!! TTCTGAAGTAAGGTCCTTTA+GGG + chr4_1:49449340-49449359 None:intergenic 35.0%
!! TTTCTGAAGTAAGGTCCTTT+AGG + chr4_1:49449341-49449360 None:intergenic 35.0%
!! CTTACCATGTTTCTGAAGTA+AGG + chr4_1:49449350-49449369 None:intergenic 35.0%
CTTACTTCAGAAACATGGTA+AGG - chr4_1:49449348-49449367 Msa0552770:intron 35.0%
! TGTTTGAGCTTGTTCATTCA+AGG - chr4_1:49449486-49449505 Msa0552770:intron 35.0%
! TCAACGGATTCATCTAAAAC+AGG + chr4_1:49449518-49449537 None:intergenic 35.0%
!! AGTTTTTGACTCAAACAACC+AGG + chr4_1:49449623-49449642 None:intergenic 35.0%
! GCTTTTGCAAATGGTATTTC+AGG + chr4_1:49449647-49449666 None:intergenic 35.0%
ATGAAGATGAAGGATGAGAA+TGG - chr4_1:49449884-49449903 Msa0552770:intron 35.0%
! TGAATTTTATACTAGCTGGG+AGG - chr4_1:49449945-49449964 Msa0552770:intron 35.0%
! GAATTTTATACTAGCTGGGA+GGG - chr4_1:49449946-49449965 Msa0552770:intron 35.0%
GCCTGAAGAGATTAAAAAGA+TGG - chr4_1:49450117-49450136 Msa0552770:CDS 35.0%
ATTACCTCTTTGTGATCAAC+AGG + chr4_1:49450193-49450212 None:intergenic 35.0%
! TCTCTATTCCTTTTCGATTG+TGG - chr4_1:49450465-49450484 Msa0552770:CDS 35.0%
! AAGATTAGTTAGGCAAACAG+TGG + chr4_1:49450706-49450725 None:intergenic 35.0%
! AATTGACAGATTTTCCAGGT+TGG + chr4_1:49450842-49450861 None:intergenic 35.0%
GTCATATTAAATGCACCTAG+TGG - chr4_1:49450885-49450904 Msa0552770:CDS 35.0%
! TGACTTTTTGTAGGTAGTTG+AGG - chr4_1:49450966-49450985 Msa0552770:CDS 35.0%
TGTTTAGTACTGTTCCATCT+GGG + chr4_1:49451002-49451021 None:intergenic 35.0%
TTGTTTAGTACTGTTCCATC+TGG + chr4_1:49451003-49451022 None:intergenic 35.0%
GATGGAACAGTACTAAACAA+AGG - chr4_1:49451003-49451022 Msa0552770:CDS 35.0%
AAATTCACAGCATTCAATGG+CGG - chr4_1:49451150-49451169 Msa0552770:CDS 35.0%
!! GGAGGAGGTAAAGTTGATAT+TGG + chr4_1:49448952-49448971 None:intergenic 40.0%
GGATTTGGATGTCTTGTAAG+AGG + chr4_1:49449046-49449065 None:intergenic 40.0%
CAAGAAAAGGCCAAATAGGT+AGG + chr4_1:49449136-49449155 None:intergenic 40.0%
!! CTACCTATTTGGCCTTTTCT+TGG - chr4_1:49449134-49449153 Msa0552770:CDS 40.0%
AGGACCTTACTTCAGAAACA+TGG - chr4_1:49449343-49449362 Msa0552770:intron 40.0%
AACATGGTAAGGGACTTACT+TGG - chr4_1:49449359-49449378 Msa0552770:intron 40.0%
TCAGTGCAGACGATGAAAAA+TGG - chr4_1:49449393-49449412 Msa0552770:intron 40.0%
!!! ATAGCTTTTGGTGTTGATCC+TGG - chr4_1:49449602-49449621 Msa0552770:intron 40.0%
ACCATTTGCAAAAGCCTTTG+AGG - chr4_1:49449652-49449671 Msa0552770:intron 40.0%
! TCCTCAAAGGCTTTTGCAAA+TGG + chr4_1:49449656-49449675 None:intergenic 40.0%
ATGAACTTCCAAACACACGT+AGG + chr4_1:49449713-49449732 None:intergenic 40.0%
TTCATGAGGCTTCTCAACTT+AGG - chr4_1:49449728-49449747 Msa0552770:intron 40.0%
!!! TGGCTTTGAGCTGGTTTTTT+TGG - chr4_1:49449981-49450000 Msa0552770:intron 40.0%
GCTTGATCAGAATCATGAAG+TGG - chr4_1:49450006-49450025 Msa0552770:intron 40.0%
TGATCAGAATCATGAAGTGG+AGG - chr4_1:49450009-49450028 Msa0552770:intron 40.0%
ATTAGAAGAGATATGCAGGG+TGG - chr4_1:49450039-49450058 Msa0552770:intron 40.0%
TGTGATCAACAGGAACAGAA+GGG + chr4_1:49450183-49450202 None:intergenic 40.0%
TTGTGATCAACAGGAACAGA+AGG + chr4_1:49450184-49450203 None:intergenic 40.0%
TGTTCCTGTTGATCACAAAG+AGG - chr4_1:49450186-49450205 Msa0552770:CDS 40.0%
ACTACTATCCCTATGAAGCA+TGG - chr4_1:49450278-49450297 Msa0552770:CDS 40.0%
!! GTAATTACAAGTGTCGGTGT+CGG - chr4_1:49450371-49450390 Msa0552770:CDS 40.0%
TGTATAGGAAAACACCAACC+TGG - chr4_1:49450825-49450844 Msa0552770:CDS 40.0%
GAGGATGATATATTCCCAGA+TGG - chr4_1:49450985-49451004 Msa0552770:CDS 40.0%
! TGGGAAGAATGGAAAGCATA+TGG - chr4_1:49451055-49451074 Msa0552770:CDS 40.0%
! GGGAAGAATGGAAAGCATAT+GGG - chr4_1:49451056-49451075 Msa0552770:CDS 40.0%
! GGAAGAATGGAAAGCATATG+GGG - chr4_1:49451057-49451076 Msa0552770:CDS 40.0%
GCAGAGAGTTTAAACCAGAA+AGG - chr4_1:49451088-49451107 Msa0552770:CDS 40.0%
GAGAGTTTAAACCAGAAAGG+TGG - chr4_1:49451091-49451110 Msa0552770:CDS 40.0%
! CCATCTTTTAACCACCTTTC+TGG + chr4_1:49451105-49451124 None:intergenic 40.0%
CCAGAAAGGTGGTTAAAAGA+TGG - chr4_1:49451102-49451121 Msa0552770:CDS 40.0%
TAGATATCATGTGAAGGTGG+TGG - chr4_1:49451242-49451261 Msa0552770:CDS 40.0%
! AAGCAATCTTTGGCTCAACA+GGG + chr4_1:49451275-49451294 None:intergenic 40.0%
! AAAGCAATCTTTGGCTCAAC+AGG + chr4_1:49451276-49451295 None:intergenic 40.0%
!! GGAGGAGGTAAAGTTGATAT+TGG + chr4_1:49448952-49448971 None:intergenic 40.0%
GGATTTGGATGTCTTGTAAG+AGG + chr4_1:49449046-49449065 None:intergenic 40.0%
CAAGAAAAGGCCAAATAGGT+AGG + chr4_1:49449136-49449155 None:intergenic 40.0%
!! CTACCTATTTGGCCTTTTCT+TGG - chr4_1:49449134-49449153 Msa0552770:CDS 40.0%
AGGACCTTACTTCAGAAACA+TGG - chr4_1:49449343-49449362 Msa0552770:intron 40.0%
AACATGGTAAGGGACTTACT+TGG - chr4_1:49449359-49449378 Msa0552770:intron 40.0%
TCAGTGCAGACGATGAAAAA+TGG - chr4_1:49449393-49449412 Msa0552770:intron 40.0%
!!! ATAGCTTTTGGTGTTGATCC+TGG - chr4_1:49449602-49449621 Msa0552770:intron 40.0%
ACCATTTGCAAAAGCCTTTG+AGG - chr4_1:49449652-49449671 Msa0552770:intron 40.0%
! TCCTCAAAGGCTTTTGCAAA+TGG + chr4_1:49449656-49449675 None:intergenic 40.0%
ATGAACTTCCAAACACACGT+AGG + chr4_1:49449713-49449732 None:intergenic 40.0%
TTCATGAGGCTTCTCAACTT+AGG - chr4_1:49449728-49449747 Msa0552770:intron 40.0%
!!! TGGCTTTGAGCTGGTTTTTT+TGG - chr4_1:49449981-49450000 Msa0552770:intron 40.0%
GCTTGATCAGAATCATGAAG+TGG - chr4_1:49450006-49450025 Msa0552770:intron 40.0%
TGATCAGAATCATGAAGTGG+AGG - chr4_1:49450009-49450028 Msa0552770:intron 40.0%
ATTAGAAGAGATATGCAGGG+TGG - chr4_1:49450039-49450058 Msa0552770:intron 40.0%
TGTGATCAACAGGAACAGAA+GGG + chr4_1:49450183-49450202 None:intergenic 40.0%
TTGTGATCAACAGGAACAGA+AGG + chr4_1:49450184-49450203 None:intergenic 40.0%
TGTTCCTGTTGATCACAAAG+AGG - chr4_1:49450186-49450205 Msa0552770:CDS 40.0%
ACTACTATCCCTATGAAGCA+TGG - chr4_1:49450278-49450297 Msa0552770:CDS 40.0%
!! GTAATTACAAGTGTCGGTGT+CGG - chr4_1:49450371-49450390 Msa0552770:CDS 40.0%
TGTATAGGAAAACACCAACC+TGG - chr4_1:49450825-49450844 Msa0552770:CDS 40.0%
GAGGATGATATATTCCCAGA+TGG - chr4_1:49450985-49451004 Msa0552770:CDS 40.0%
! TGGGAAGAATGGAAAGCATA+TGG - chr4_1:49451055-49451074 Msa0552770:CDS 40.0%
! GGGAAGAATGGAAAGCATAT+GGG - chr4_1:49451056-49451075 Msa0552770:CDS 40.0%
! GGAAGAATGGAAAGCATATG+GGG - chr4_1:49451057-49451076 Msa0552770:CDS 40.0%
GCAGAGAGTTTAAACCAGAA+AGG - chr4_1:49451088-49451107 Msa0552770:CDS 40.0%
GAGAGTTTAAACCAGAAAGG+TGG - chr4_1:49451091-49451110 Msa0552770:CDS 40.0%
! CCATCTTTTAACCACCTTTC+TGG + chr4_1:49451105-49451124 None:intergenic 40.0%
CCAGAAAGGTGGTTAAAAGA+TGG - chr4_1:49451102-49451121 Msa0552770:CDS 40.0%
TAGATATCATGTGAAGGTGG+TGG - chr4_1:49451242-49451261 Msa0552770:CDS 40.0%
! AAGCAATCTTTGGCTCAACA+GGG + chr4_1:49451275-49451294 None:intergenic 40.0%
! AAAGCAATCTTTGGCTCAAC+AGG + chr4_1:49451276-49451295 None:intergenic 40.0%
GTTGAAGTTGAAGTTTGCGG+CGG + chr4_1:49449000-49449019 None:intergenic 45.0%
ACCATCATGGCCTACCTATT+TGG - chr4_1:49449123-49449142 Msa0552770:CDS 45.0%
CAGAAGTGACTATGCAGTTG+AGG + chr4_1:49449271-49449290 None:intergenic 45.0%
!!! TGGTTTTGAGAAGGTGTTCG+AGG + chr4_1:49449304-49449323 None:intergenic 45.0%
GTAAGGGACTTACTTGGAGA+TGG - chr4_1:49449365-49449384 Msa0552770:intron 45.0%
TCGTTATGCCTACGTGTGTT+TGG - chr4_1:49449702-49449721 Msa0552770:intron 45.0%
CGTGTGTTTGGAAGTTCATG+AGG - chr4_1:49449714-49449733 Msa0552770:intron 45.0%
TATGAAGCACGGACACTCTT+TGG + chr4_1:49450421-49450440 None:intergenic 45.0%
GTTGAAGTTGAAGTTTGCGG+CGG + chr4_1:49449000-49449019 None:intergenic 45.0%
ACCATCATGGCCTACCTATT+TGG - chr4_1:49449123-49449142 Msa0552770:CDS 45.0%
CAGAAGTGACTATGCAGTTG+AGG + chr4_1:49449271-49449290 None:intergenic 45.0%
!!! TGGTTTTGAGAAGGTGTTCG+AGG + chr4_1:49449304-49449323 None:intergenic 45.0%
GTAAGGGACTTACTTGGAGA+TGG - chr4_1:49449365-49449384 Msa0552770:intron 45.0%
TCGTTATGCCTACGTGTGTT+TGG - chr4_1:49449702-49449721 Msa0552770:intron 45.0%
CGTGTGTTTGGAAGTTCATG+AGG - chr4_1:49449714-49449733 Msa0552770:intron 45.0%
TATGAAGCACGGACACTCTT+TGG + chr4_1:49450421-49450440 None:intergenic 45.0%
!! AATTTGATAAAAAATTTATA+GGG + chr4_1:49450588-49450607 None:intergenic 5.0%
!! AAATTTGATAAAAAATTTAT+AGG + chr4_1:49450589-49450608 None:intergenic 5.0%
!! AATTTGATAAAAAATTTATA+GGG + chr4_1:49450588-49450607 None:intergenic 5.0%
!! AAATTTGATAAAAAATTTAT+AGG + chr4_1:49450589-49450608 None:intergenic 5.0%
GCCAAATAGGTAGGCCATGA+TGG + chr4_1:49449127-49449146 None:intergenic 50.0%
CAGTTGAGGCTGCTGAAAGA+AGG + chr4_1:49449257-49449276 None:intergenic 50.0%
!! AGAAGGTGTTCGAGGTTTCG+AGG + chr4_1:49449296-49449315 None:intergenic 50.0%
GGCTTCTGTTGCATCCTCAA+AGG + chr4_1:49449669-49449688 None:intergenic 50.0%
TGAGGATGCAACAGAAGCCA+CGG - chr4_1:49449670-49449689 Msa0552770:intron 50.0%
!! CATAACGAAACGAAGCACCG+TGG + chr4_1:49449690-49449709 None:intergenic 50.0%
TGGGAGGGATACTTCTTCTG+TGG - chr4_1:49449961-49449980 Msa0552770:intron 50.0%
!! CTTCTTCTGTGGCTTTGAGC+TGG - chr4_1:49449972-49449991 Msa0552770:intron 50.0%
TCCCTATGAAGCATGGACAC+CGG - chr4_1:49450285-49450304 Msa0552770:CDS 50.0%
! TCTTTGGATTAGGCGTGTCC+CGG + chr4_1:49450405-49450424 None:intergenic 50.0%
GCACGGACACTCTTTGGATT+AGG + chr4_1:49450415-49450434 None:intergenic 50.0%
TAAATGCACCTAGTGGCTCG+AGG - chr4_1:49450892-49450911 Msa0552770:CDS 50.0%
TTCCATATCCTCGAGCCACT+AGG + chr4_1:49450903-49450922 None:intergenic 50.0%
GGCGGACCTCGTTTATGTTT+AGG - chr4_1:49451168-49451187 Msa0552770:CDS 50.0%
GCCAAATAGGTAGGCCATGA+TGG + chr4_1:49449127-49449146 None:intergenic 50.0%
CAGTTGAGGCTGCTGAAAGA+AGG + chr4_1:49449257-49449276 None:intergenic 50.0%
!! AGAAGGTGTTCGAGGTTTCG+AGG + chr4_1:49449296-49449315 None:intergenic 50.0%
GGCTTCTGTTGCATCCTCAA+AGG + chr4_1:49449669-49449688 None:intergenic 50.0%
TGAGGATGCAACAGAAGCCA+CGG - chr4_1:49449670-49449689 Msa0552770:intron 50.0%
!! CATAACGAAACGAAGCACCG+TGG + chr4_1:49449690-49449709 None:intergenic 50.0%
TGGGAGGGATACTTCTTCTG+TGG - chr4_1:49449961-49449980 Msa0552770:intron 50.0%
!! CTTCTTCTGTGGCTTTGAGC+TGG - chr4_1:49449972-49449991 Msa0552770:intron 50.0%
TCCCTATGAAGCATGGACAC+CGG - chr4_1:49450285-49450304 Msa0552770:CDS 50.0%
! TCTTTGGATTAGGCGTGTCC+CGG + chr4_1:49450405-49450424 None:intergenic 50.0%
GCACGGACACTCTTTGGATT+AGG + chr4_1:49450415-49450434 None:intergenic 50.0%
TAAATGCACCTAGTGGCTCG+AGG - chr4_1:49450892-49450911 Msa0552770:CDS 50.0%
TTCCATATCCTCGAGCCACT+AGG + chr4_1:49450903-49450922 None:intergenic 50.0%
GGCGGACCTCGTTTATGTTT+AGG - chr4_1:49451168-49451187 Msa0552770:CDS 50.0%
TATGCAGGGTGGTGAGTCAG+AGG - chr4_1:49450050-49450069 Msa0552770:intron 55.0%
CCCGGTGTCCATGCTTCATA+GGG + chr4_1:49450289-49450308 None:intergenic 55.0%
CCCTATGAAGCATGGACACC+GGG - chr4_1:49450286-49450305 Msa0552770:CDS 55.0%
TCAAGTGTCCGTGTTGTGCC+CGG + chr4_1:49450307-49450326 None:intergenic 55.0%
CACCTAGTGGCTCGAGGATA+TGG - chr4_1:49450898-49450917 Msa0552770:CDS 55.0%
TATGCAGGGTGGTGAGTCAG+AGG - chr4_1:49450050-49450069 Msa0552770:intron 55.0%
CCCGGTGTCCATGCTTCATA+GGG + chr4_1:49450289-49450308 None:intergenic 55.0%
CCCTATGAAGCATGGACACC+GGG - chr4_1:49450286-49450305 Msa0552770:CDS 55.0%
TCAAGTGTCCGTGTTGTGCC+CGG + chr4_1:49450307-49450326 None:intergenic 55.0%
CACCTAGTGGCTCGAGGATA+TGG - chr4_1:49450898-49450917 Msa0552770:CDS 55.0%
TGAAGTTTGCGGCGGCGAGA+GGG + chr4_1:49448992-49449011 None:intergenic 60.0%
TTGAAGTTTGCGGCGGCGAG+AGG + chr4_1:49448993-49449012 None:intergenic 60.0%
GCCCGGTGTCCATGCTTCAT+AGG + chr4_1:49450290-49450309 None:intergenic 60.0%
CATGGACACCGGGCACAACA+CGG - chr4_1:49450296-49450315 Msa0552770:CDS 60.0%
GATTAGGCGTGTCCCGGTGT+CGG + chr4_1:49450399-49450418 None:intergenic 60.0%
TGAAGTTTGCGGCGGCGAGA+GGG + chr4_1:49448992-49449011 None:intergenic 60.0%
TTGAAGTTTGCGGCGGCGAG+AGG + chr4_1:49448993-49449012 None:intergenic 60.0%
GCCCGGTGTCCATGCTTCAT+AGG + chr4_1:49450290-49450309 None:intergenic 60.0%
CATGGACACCGGGCACAACA+CGG - chr4_1:49450296-49450315 Msa0552770:CDS 60.0%
GATTAGGCGTGTCCCGGTGT+CGG + chr4_1:49450399-49450418 None:intergenic 60.0%
GGAGGAGGAGGAGTTGGAGG+AGG + chr4_1:49448967-49448986 None:intergenic 65.0%
GGAGGAGGAGGAGGAGTTGG+AGG + chr4_1:49448970-49448989 None:intergenic 65.0%
AGGGGAGGAGGAGGAGGAGT+TGG + chr4_1:49448973-49448992 None:intergenic 65.0%
GAAGTTTGCGGCGGCGAGAG+GGG + chr4_1:49448991-49449010 None:intergenic 65.0%
!! GTCGGTGTCGGATCCGACAC+CGG - chr4_1:49450383-49450402 Msa0552770:CDS 65.0%
!! TCGGTGTCGGATCCGACACC+GGG - chr4_1:49450384-49450403 Msa0552770:CDS 65.0%
GGAGGAGGAGGAGTTGGAGG+AGG + chr4_1:49448967-49448986 None:intergenic 65.0%
GGAGGAGGAGGAGGAGTTGG+AGG + chr4_1:49448970-49448989 None:intergenic 65.0%
AGGGGAGGAGGAGGAGGAGT+TGG + chr4_1:49448973-49448992 None:intergenic 65.0%
GAAGTTTGCGGCGGCGAGAG+GGG + chr4_1:49448991-49449010 None:intergenic 65.0%
!! GTCGGTGTCGGATCCGACAC+CGG - chr4_1:49450383-49450402 Msa0552770:CDS 65.0%
!! TCGGTGTCGGATCCGACACC+GGG - chr4_1:49450384-49450403 Msa0552770:CDS 65.0%
GGCGAGAGGGGAGGAGGAGG+AGG + chr4_1:49448979-49448998 None:intergenic 75.0%
GTTTGCGGCGGCGAGAGGGG+AGG + chr4_1:49448988-49449007 None:intergenic 75.0%
GGCGAGAGGGGAGGAGGAGG+AGG + chr4_1:49448979-49448998 None:intergenic 75.0%
GTTTGCGGCGGCGAGAGGGG+AGG + chr4_1:49448988-49449007 None:intergenic 75.0%
! GGCGGCGAGAGGGGAGGAGG+AGG + chr4_1:49448982-49449001 None:intergenic 80.0%
! TGCGGCGGCGAGAGGGGAGG+AGG + chr4_1:49448985-49449004 None:intergenic 80.0%
! GGCGGCGAGAGGGGAGGAGG+AGG + chr4_1:49448982-49449001 None:intergenic 80.0%
! TGCGGCGGCGAGAGGGGAGG+AGG + chr4_1:49448985-49449004 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 49448936 49451386 49448936 ID=Msa0552770;Name=Msa0552770
chr4_1 mRNA 49448936 49451386 49448936 ID=Msa0552770-mRNA-1;Parent=Msa0552770;Name=Msa0552770-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|0.5|1|1|2|0|559
chr4_1 exon 49450115 49451386 49450115 ID=Msa0552770-mRNA-1:exon:13898;Parent=Msa0552770-mRNA-1
chr4_1 exon 49448936 49449343 49448936 ID=Msa0552770-mRNA-1:exon:13897;Parent=Msa0552770-mRNA-1
chr4_1 CDS 49450115 49451386 49450115 ID=Msa0552770-mRNA-1:cds;Parent=Msa0552770-mRNA-1
chr4_1 CDS 49448936 49449343 49448936 ID=Msa0552770-mRNA-1:cds;Parent=Msa0552770-mRNA-1
Gene Sequence

>Msa0552770

ATGCCCAAATCATCCAATATCAACTTTACCTCCTCCAACTCCTCCTCCTCCTCCCCTCTCGCCGCCGCAAACTTCAACTTCAACATGATCTATTCTATTAGTCTCTCCCTCTTACAAGACATCCAAATCCTAGAAATTCTCATTGCAATTACTCTCTTCATAATCATTCATTCTCTTAGACAAAAAAACCATCATGGCCTACCTATTTGGCCTTTTCTTGGTATGTTACCTTCTTTAATCAATGGTCTAAGGACCAACTTGTATGAATGGATCACAGACATTCTTAACAAACAAAATGGGACTTTTAGATTCAAAGGTCCTTCTTTCAGCAGCCTCAACTGCATAGTCACTTCTGATCCTCGAAACCTCGAACACCTTCTCAAAACCAAATTCATTAACTTCCCTAAAGGACCTTACTTCAGAAACATGGTAAGGGACTTACTTGGAGATGGTATATTCAGTGCAGACGATGAAAAATGGCAAAAACAAAGAAAAACAGCGAGCATCGAGTTTCATTCGACCAAGTTCAGAAATTTAACAACTGATTCTTTGTTTGAGCTTGTTCATTCAAGGCTCTTACCTGTTTTAGATGAATCCGTTGATAAAAGGATTGTCACTGATCTTCAAGACATTCTTTTAAGACTAACTTTTGATAATGTTTGTATGATAGCTTTTGGTGTTGATCCTGGTTGTTTGAGTCAAAAACTTCCTGAAATACCATTTGCAAAAGCCTTTGAGGATGCAACAGAAGCCACGGTGCTTCGTTTCGTTATGCCTACGTGTGTTTGGAAGTTCATGAGGCTTCTCAACTTAGGTGTAGAAAGAAAACTCAAGAAATCAATTAAAGGGGTTGATGAATTTGCAATGAATGTCATAAGGACTAGAAAAAAGGAACTGTCTTTGGAAGTTGATGAAAAGAAACAAAGATCAGATTTGTTAACTGTTTTTATGAAGATGAAGGATGAGAATGGAAGTGCTTATTCAGATAAGTTTTTGAGGGATATATGTGTGAATTTTATACTAGCTGGGAGGGATACTTCTTCTGTGGCTTTGAGCTGGTTTTTTTGGTTGCTTGATCAGAATCATGAAGTGGAGGAGAAGATATTAGAAGAGATATGCAGGGTGGTGAGTCAGAGGAATGATATAAAGAAAGAAGAATTTGAAAATTCTTTGATATTTAGGCCTGAAGAGATTAAAAAGATGGATTATTTGCATGCTTGTTTATCTGAAACACTCAGATTATACCCTTCTGTTCCTGTTGATCACAAAGAGGTAGTTGAGGATGATATATTCCCAGATGGAACAGTACTAAACAAAGGTACAAAAGTGATCTATGCAATTTATGCAATGGGAAGAATGGAAAGCATATGGGGAAAAGACTGCAGAGAGTTTAAACCAGAAAGGTGGTTAAAAGATGGTCGTTTTATGAGTGAATCTGCGTACAAATTCACAGCATTCAATGGCGGACCTCGTTTATGTTTAGGAAAAGATTTTGCATATTATCAAATGAAGTGTGTTGCTGCTAGTATCATATATAGATATCATGTGAAGGTGGTGGAGAATCACCCTGTTGAGCCAAAGATTGCTTTAACTATGTATATGAAGCATGGAATCAAAGTTAATCTCTATAGGAGGGATGCTGCTGAAATTCAAAAACACTTGGATTTGATCATTGGTTGA
Protein sequence

>Msa0552770

MPKSSNINFTSSNSSSSSPLAAANFNFNMIYSISLSLLQDIQILEILIAITLFIIIHSLRQKNHHGLPIWPFLGMLPSLINGLRTNLYEWITDILNKQNGTFRFKGPSFSSLNCIVTSDPRNLEHLLKTKFINFPKGPYFRNMVRDLLGDGIFSADDEKWQKQRKTASIEFHSTKFRNLTTDSLFELVHSRLLPVLDESVDKRIVTDLQDILLRLTFDNVCMIAFGVDPGCLSQKLPEIPFAKAFEDATEATVLRFVMPTCVWKFMRLLNLGVERKLKKSIKGVDEFAMNVIRTRKKELSLEVDEKKQRSDLLTVFMKMKDENGSAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNHEVEEKILEEICRVVSQRNDIKKEEFENSLIFRPEEIKKMDYLHACLSETLRLYPSVPVDHKEVVEDDIFPDGTVLNKGTKVIYAIYAMGRMESIWGKDCREFKPERWLKDGRFMSESAYKFTAFNGGPRLCLGKDFAYYQMKCVAASIIYRYHVKVVENHPVEPKIALTMYMKHGIKVNLYRRDAAEIQKHLDLIIG*