Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143590 | XP_013447979.1 | 91.511 | 589 | 16 | 1 | 1 | 555 | 1 | 589 | 0.0 | 1033 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143590 | sp|F4I9E1|NFD4_ARATH | 22.145 | 578 | 348 | 14 | 15 | 545 | 43 | 565 | 8.67e-27 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143590 | A0A072TXV1 | 91.511 | 589 | 16 | 1 | 1 | 555 | 1 | 589 | 0.0 | 1033 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa0143590 | 0.804744 | 1.864714e-49 | -8.615850e-47 |
| Msa0001800 | Msa0143590 | 0.836923 | 7.039505e-57 | -8.615850e-47 |
| Msa0006080 | Msa0143590 | 0.839127 | 1.908360e-57 | -8.615850e-47 |
| Msa0013270 | Msa0143590 | 0.867525 | 1.283083e-65 | -8.615850e-47 |
| Msa0013970 | Msa0143590 | 0.809915 | 1.494146e-50 | -8.615850e-47 |
| Msa0017300 | Msa0143590 | -0.826357 | 2.835382e-54 | -8.615850e-47 |
| Msa0024500 | Msa0143590 | -0.800632 | 1.315941e-48 | -8.615850e-47 |
| Msa0025570 | Msa0143590 | 0.801290 | 9.656479e-49 | -8.615850e-47 |
| Msa0037180 | Msa0143590 | 0.860817 | 1.584890e-63 | -8.615850e-47 |
| Msa0040860 | Msa0143590 | -0.804695 | 1.909543e-49 | -8.615850e-47 |
| Msa0045810 | Msa0143590 | 0.866387 | 2.958982e-65 | -8.615850e-47 |
| Msa0046200 | Msa0143590 | 0.846939 | 1.584458e-59 | -8.615850e-47 |
| Msa0046970 | Msa0143590 | 0.808551 | 2.929100e-50 | -8.615850e-47 |
| Msa0054610 | Msa0143590 | 0.803534 | 3.329543e-49 | -8.615850e-47 |
| Msa0054790 | Msa0143590 | 0.813252 | 2.812475e-51 | -8.615850e-47 |
| Msa0062190 | Msa0143590 | 0.851406 | 9.059311e-61 | -8.615850e-47 |
| Msa0065670 | Msa0143590 | -0.810496 | 1.119992e-50 | -8.615850e-47 |
| Msa0072180 | Msa0143590 | 0.809537 | 1.801463e-50 | -8.615850e-47 |
| Msa0073110 | Msa0143590 | 0.816802 | 4.582766e-52 | -8.615850e-47 |
| Msa0092220 | Msa0143590 | 0.850190 | 1.992884e-60 | -8.615850e-47 |
| Msa0101380 | Msa0143590 | 0.804879 | 1.747726e-49 | -8.615850e-47 |
| Msa0106540 | Msa0143590 | 0.866083 | 3.694609e-65 | -8.615850e-47 |
| Msa0124910 | Msa0143590 | 0.801703 | 7.946490e-49 | -8.615850e-47 |
| Msa0139500 | Msa0143590 | 0.863605 | 2.209103e-64 | -8.615850e-47 |
| Msa0143590 | Msa0145640 | 0.803033 | 4.228755e-49 | -8.615850e-47 |
| Msa0143590 | Msa0177320 | 0.869207 | 3.681639e-66 | -8.615850e-47 |
| Msa0143590 | Msa0183710 | 0.801792 | 7.619506e-49 | -8.615850e-47 |
| Msa0143590 | Msa0195230 | 0.814937 | 1.194569e-51 | -8.615850e-47 |
| Msa0143590 | Msa0195260 | 0.814848 | 1.249947e-51 | -8.615850e-47 |
| Msa0143590 | Msa0195560 | 0.806392 | 8.413416e-50 | -8.615850e-47 |
| Msa0143590 | Msa0203080 | 0.800532 | 1.378866e-48 | -8.615850e-47 |
| Msa0143590 | Msa0206370 | 0.810649 | 1.037730e-50 | -8.615850e-47 |
| Msa0143590 | Msa0211460 | 0.821395 | 4.130554e-53 | -8.615850e-47 |
| Msa0143590 | Msa0216150 | -0.833179 | 6.188803e-56 | -8.615850e-47 |
| Msa0143590 | Msa0216340 | 0.826483 | 2.647121e-54 | -8.615850e-47 |
| Msa0143590 | Msa0216360 | 0.805008 | 1.642284e-49 | -8.615850e-47 |
| Msa0143590 | Msa0225070 | -0.828946 | 6.777035e-55 | -8.615850e-47 |
| Msa0143590 | Msa0236940 | 0.827645 | 1.395679e-54 | -8.615850e-47 |
| Msa0143590 | Msa0239560 | 0.802186 | 6.322835e-49 | -8.615850e-47 |
| Msa0143590 | Msa0240540 | 0.812966 | 3.249828e-51 | -8.615850e-47 |
| Msa0143590 | Msa0240590 | -0.802961 | 4.375564e-49 | -8.615850e-47 |
| Msa0143590 | Msa0241750 | 0.812677 | 3.758562e-51 | -8.615850e-47 |
| Msa0143590 | Msa0256540 | 0.845558 | 3.767509e-59 | -8.615850e-47 |
| Msa0143590 | Msa0267450 | -0.841553 | 4.432216e-58 | -8.615850e-47 |
| Msa0143590 | Msa0267510 | -0.845030 | 5.235453e-59 | -8.615850e-47 |
| Msa0143590 | Msa0276860 | 0.807978 | 3.880893e-50 | -8.615850e-47 |
| Msa0143590 | Msa0279000 | 0.822610 | 2.160688e-53 | -8.615850e-47 |
| Msa0143590 | Msa0279090 | -0.807789 | 4.258059e-50 | -8.615850e-47 |
| Msa0143590 | Msa0279810 | 0.830400 | 3.000673e-55 | -8.615850e-47 |
| Msa0143590 | Msa0288620 | 0.801692 | 7.985655e-49 | -8.615850e-47 |
| Msa0143590 | Msa0290800 | 0.808881 | 2.490856e-50 | -8.615850e-47 |
| Msa0143590 | Msa0308750 | 0.800291 | 1.543997e-48 | -8.615850e-47 |
| Msa0143590 | Msa0318490 | 0.841086 | 5.882550e-58 | -8.615850e-47 |
| Msa0143590 | Msa0319220 | 0.823154 | 1.613292e-53 | -8.615850e-47 |
| Msa0143590 | Msa0326710 | 0.837848 | 4.080090e-57 | -8.615850e-47 |
| Msa0143590 | Msa0328870 | 0.803570 | 3.273009e-49 | -8.615850e-47 |
| Msa0143590 | Msa0331070 | -0.817676 | 2.914481e-52 | -8.615850e-47 |
| Msa0143590 | Msa0334320 | 0.832448 | 9.398467e-56 | -8.615850e-47 |
| Msa0143590 | Msa0341060 | -0.817833 | 2.686086e-52 | -8.615850e-47 |
| Msa0143590 | Msa0354600 | 0.813360 | 2.662099e-51 | -8.615850e-47 |
| Msa0143590 | Msa0354840 | 0.843435 | 1.403453e-58 | -8.615850e-47 |
| Msa0143590 | Msa0364030 | -0.841721 | 4.000727e-58 | -8.615850e-47 |
| Msa0143590 | Msa0364910 | -0.821349 | 4.233612e-53 | -8.615850e-47 |
| Msa0143590 | Msa0380980 | 0.810920 | 9.066334e-51 | -8.615850e-47 |
| Msa0143590 | Msa0381100 | 0.804579 | 2.018873e-49 | -8.615850e-47 |
| Msa0143590 | Msa0386880 | 0.869253 | 3.555536e-66 | -8.615850e-47 |
| Msa0143590 | Msa0386910 | 0.811372 | 7.237171e-51 | -8.615850e-47 |
| Msa0143590 | Msa0387930 | 0.811717 | 6.087700e-51 | -8.615850e-47 |
| Msa0143590 | Msa0388210 | 0.806793 | 6.922132e-50 | -8.615850e-47 |
| Msa0143590 | Msa0403740 | -0.841958 | 3.464681e-58 | -8.615850e-47 |
| Msa0143590 | Msa0412580 | -0.842949 | 1.891464e-58 | -8.615850e-47 |
| Msa0143590 | Msa0412790 | 0.800110 | 1.680423e-48 | -8.615850e-47 |
| Msa0143590 | Msa0428210 | 0.807654 | 4.547165e-50 | -8.615850e-47 |
| Msa0143590 | Msa0428300 | -0.804405 | 2.194564e-49 | -8.615850e-47 |
| Msa0143590 | Msa0437480 | 0.828426 | 9.050472e-55 | -8.615850e-47 |
| Msa0143590 | Msa0437520 | 0.802835 | 4.645351e-49 | -8.615850e-47 |
| Msa0143590 | Msa0440350 | 0.834307 | 3.232028e-56 | -8.615850e-47 |
| Msa0143590 | Msa0456450 | -0.840886 | 6.636189e-58 | -8.615850e-47 |
| Msa0143590 | Msa0457070 | -0.858467 | 8.075230e-63 | -8.615850e-47 |
| Msa0143590 | Msa0467170 | 0.801129 | 1.041523e-48 | -8.615850e-47 |
| Msa0143590 | Msa0467330 | 0.807848 | 4.137014e-50 | -8.615850e-47 |
| Msa0143590 | Msa0481670 | 0.814388 | 1.580691e-51 | -8.615850e-47 |
| Msa0143590 | Msa0484210 | -0.819546 | 1.097201e-52 | -8.615850e-47 |
| Msa0143590 | Msa0501080 | 0.807180 | 5.732168e-50 | -8.615850e-47 |
| Msa0143590 | Msa0519070 | -0.801561 | 8.495300e-49 | -8.615850e-47 |
| Msa0143590 | Msa0523110 | 0.813682 | 2.261740e-51 | -8.615850e-47 |
| Msa0143590 | Msa0525180 | -0.800405 | 1.463613e-48 | -8.615850e-47 |
| Msa0143590 | Msa0525880 | 0.833748 | 4.462666e-56 | -8.615850e-47 |
| Msa0143590 | Msa0549130 | 0.805491 | 1.301206e-49 | -8.615850e-47 |
| Msa0143590 | Msa0552770 | 0.813928 | 1.996241e-51 | -8.615850e-47 |
| Msa0143590 | Msa0555280 | 0.802108 | 6.560521e-49 | -8.615850e-47 |
| Msa0143590 | Msa0565700 | 0.837495 | 5.026847e-57 | -8.615850e-47 |
| Msa0143590 | Msa0567330 | 0.857608 | 1.453322e-62 | -8.615850e-47 |
| Msa0143590 | Msa0567570 | 0.840489 | 8.434627e-58 | -8.615850e-47 |
| Msa0143590 | Msa0572730 | -0.801569 | 8.465048e-49 | -8.615850e-47 |
| Msa0143590 | Msa0574900 | 0.851898 | 6.574473e-61 | -8.615850e-47 |
| Msa0143590 | Msa0575380 | 0.805881 | 1.077490e-49 | -8.615850e-47 |
| Msa0143590 | Msa0576180 | 0.839379 | 1.641236e-57 | -8.615850e-47 |
| Msa0143590 | Msa0576320 | 0.855079 | 8.022393e-62 | -8.615850e-47 |
| Msa0143590 | Msa0579070 | -0.835030 | 2.127029e-56 | -8.615850e-47 |
| Msa0143590 | Msa0597700 | 0.811049 | 8.503661e-51 | -8.615850e-47 |
| Msa0143590 | Msa0601380 | 0.812660 | 3.792061e-51 | -8.615850e-47 |
| Msa0143590 | Msa0604190 | 0.816385 | 5.682296e-52 | -8.615850e-47 |
| Msa0143590 | Msa0606150 | 0.809379 | 1.948193e-50 | -8.615850e-47 |
| Msa0143590 | Msa0606820 | 0.817434 | 3.303746e-52 | -8.615850e-47 |
| Msa0143590 | Msa0608820 | 0.830835 | 2.348057e-55 | -8.615850e-47 |
| Msa0143590 | Msa0610700 | -0.873078 | 1.942177e-67 | -8.615850e-47 |
| Msa0143590 | Msa0617940 | 0.808932 | 2.429349e-50 | -8.615850e-47 |
| Msa0143590 | Msa0618680 | 0.842219 | 2.956090e-58 | -8.615850e-47 |
| Msa0143590 | Msa0618700 | 0.832180 | 1.095038e-55 | -8.615850e-47 |
| Msa0143590 | Msa0645390 | 0.809224 | 2.102646e-50 | -8.615850e-47 |
| Msa0143590 | Msa0646010 | 0.812983 | 3.220823e-51 | -8.615850e-47 |
| Msa0143590 | Msa0646430 | 0.809285 | 2.040386e-50 | -8.615850e-47 |
| Msa0143590 | Msa0657710 | 0.801038 | 1.086936e-48 | -8.615850e-47 |
| Msa0143590 | Msa0663480 | 0.801876 | 7.322782e-49 | -8.615850e-47 |
| Msa0143590 | Msa0682110 | 0.820495 | 6.655323e-53 | -8.615850e-47 |
| Msa0143590 | Msa0682160 | 0.829956 | 3.849861e-55 | -8.615850e-47 |
| Msa0143590 | Msa0685020 | 0.823654 | 1.233290e-53 | -8.615850e-47 |
| Msa0143590 | Msa0686040 | 0.818315 | 2.090323e-52 | -8.615850e-47 |
| Msa0143590 | Msa0686830 | 0.801485 | 8.807389e-49 | -8.615850e-47 |
| Msa0143590 | Msa0687580 | 0.816267 | 6.039667e-52 | -8.615850e-47 |
| Msa0143590 | Msa0691610 | 0.825514 | 4.498229e-54 | -8.615850e-47 |
| Msa0143590 | Msa0692790 | 0.807909 | 4.014841e-50 | -8.615850e-47 |
| Msa0143590 | Msa0698280 | 0.810374 | 1.189799e-50 | -8.615850e-47 |
| Msa0143590 | Msa0701090 | -0.800677 | 1.288216e-48 | -8.615850e-47 |
| Msa0143590 | Msa0702690 | -0.800099 | 1.689693e-48 | -8.615850e-47 |
| Msa0143590 | Msa0702800 | 0.811582 | 6.515906e-51 | -8.615850e-47 |
| Msa0143590 | Msa0703950 | 0.802868 | 4.572966e-49 | -8.615850e-47 |
| Msa0143590 | Msa0707330 | 0.803130 | 4.037043e-49 | -8.615850e-47 |
| Msa0143590 | Msa0719270 | 0.805951 | 1.041749e-49 | -8.615850e-47 |
| Msa0143590 | Msa0721930 | 0.814105 | 1.824605e-51 | -8.615850e-47 |
| Msa0143590 | Msa0725580 | 0.801428 | 9.046566e-49 | -8.615850e-47 |
| Msa0143590 | Msa0727510 | 0.808240 | 3.413075e-50 | -8.615850e-47 |
| Msa0143590 | Msa0745140 | 0.859463 | 4.063856e-63 | -8.615850e-47 |
| Msa0143590 | Msa0754020 | -0.806612 | 7.557507e-50 | -8.615850e-47 |
| Msa0143590 | Msa0755880 | 0.810261 | 1.258905e-50 | -8.615850e-47 |
| Msa0143590 | Msa0762930 | 0.815609 | 8.467895e-52 | -8.615850e-47 |
| Msa0143590 | Msa0769910 | -0.816930 | 4.288877e-52 | -8.615850e-47 |
| Msa0143590 | Msa0773960 | 0.812332 | 4.471437e-51 | -8.615850e-47 |
| Msa0143590 | Msa0775660 | 0.828502 | 8.677169e-55 | -8.615850e-47 |
| Msa0143590 | Msa0776640 | 0.859006 | 5.573453e-63 | -8.615850e-47 |
| Msa0143590 | Msa0807100 | -0.813783 | 2.149139e-51 | -8.615850e-47 |
| Msa0143590 | Msa0807870 | -0.831650 | 1.480437e-55 | -8.615850e-47 |
| Msa0143590 | Msa0813160 | 0.837610 | 4.694829e-57 | -8.615850e-47 |
| Msa0143590 | Msa0825920 | 0.862736 | 4.103111e-64 | -8.615850e-47 |
| Msa0143590 | Msa0828960 | 0.810013 | 1.423386e-50 | -8.615850e-47 |
| Msa0143590 | Msa0833030 | -0.801521 | 8.658143e-49 | -8.615850e-47 |
| Msa0143590 | Msa0838620 | -0.822628 | 2.139564e-53 | -8.615850e-47 |
| Msa0143590 | Msa0840520 | 0.803045 | 4.203363e-49 | -8.615850e-47 |
| Msa0143590 | Msa0842750 | 0.816233 | 6.146203e-52 | -8.615850e-47 |
| Msa0143590 | Msa0853590 | 0.819425 | 1.169220e-52 | -8.615850e-47 |
| Msa0143590 | Msa0865420 | 0.853422 | 2.415274e-61 | -8.615850e-47 |
| Msa0143590 | Msa0865450 | 0.806710 | 7.205744e-50 | -8.615850e-47 |
| Msa0143590 | Msa0868050 | -0.829584 | 4.743310e-55 | -8.615850e-47 |
| Msa0143590 | Msa0880910 | 0.851881 | 6.647114e-61 | -8.615850e-47 |
| Msa0143590 | Msa0882780 | 0.800121 | 1.671717e-48 | -8.615850e-47 |
| Msa0143590 | Msa0908270 | -0.804002 | 2.662202e-49 | -8.615850e-47 |
| Msa0143590 | Msa0908500 | -0.804133 | 2.500330e-49 | -8.615850e-47 |
| Msa0143590 | Msa0909260 | 0.800309 | 1.531241e-48 | -8.615850e-47 |
| Msa0143590 | Msa0910170 | 0.812607 | 3.892836e-51 | -8.615850e-47 |
| Msa0143590 | Msa0930210 | 0.829689 | 4.473549e-55 | -8.615850e-47 |
| Msa0143590 | Msa0930770 | 0.855346 | 6.708716e-62 | -8.615850e-47 |
| Msa0143590 | Msa0931680 | 0.832616 | 8.541421e-56 | -8.615850e-47 |
| Msa0143590 | Msa0932140 | 0.808117 | 3.625510e-50 | -8.615850e-47 |
| Msa0143590 | Msa0945030 | 0.810575 | 1.076771e-50 | -8.615850e-47 |
| Msa0143590 | Msa0964400 | -0.822146 | 2.769185e-53 | -8.615850e-47 |
| Msa0143590 | Msa0967780 | 0.865068 | 7.719297e-65 | -8.615850e-47 |
| Msa0143590 | Msa0967900 | -0.819373 | 1.201485e-52 | -8.615850e-47 |
| Msa0143590 | Msa0970270 | 0.821707 | 3.499710e-53 | -8.615850e-47 |
| Msa0143590 | Msa0998660 | -0.809864 | 1.532879e-50 | -8.615850e-47 |
| Msa0143590 | Msa1002820 | 0.824083 | 9.781925e-54 | -8.615850e-47 |
| Msa0143590 | Msa1013190 | 0.995912 | 2.936030e-221 | -8.615850e-47 |
| Msa0143590 | Msa1014550 | -0.801567 | 8.472581e-49 | -8.615850e-47 |
| Msa0143590 | Msa1019200 | 0.804489 | 2.107456e-49 | -8.615850e-47 |
| Msa0143590 | Msa1022420 | 0.827393 | 1.603385e-54 | -8.615850e-47 |
| Msa0143590 | Msa1024570 | 0.802190 | 6.310996e-49 | -8.615850e-47 |
| Msa0143590 | Msa1029820 | 0.829062 | 6.351664e-55 | -8.615850e-47 |
| Msa0143590 | Msa1029840 | 0.815113 | 1.091946e-51 | -8.615850e-47 |
| Msa0143590 | Msa1029860 | 0.803637 | 3.170058e-49 | -8.615850e-47 |
| Msa0143590 | Msa1036260 | -0.801171 | 1.021238e-48 | -8.615850e-47 |
| Msa0143590 | Msa1041060 | 0.813468 | 2.520764e-51 | -8.615850e-47 |
| Msa0143590 | Msa1044250 | 0.824472 | 7.922799e-54 | -8.615850e-47 |
| Msa0143590 | Msa1045230 | 0.923234 | 3.475332e-89 | -8.615850e-47 |
| Msa0143590 | Msa1045280 | 0.928326 | 3.384327e-92 | -8.615850e-47 |
| Msa0143590 | Msa1051530 | 0.826722 | 2.320804e-54 | -8.615850e-47 |
| Msa0143590 | Msa1052000 | 0.837413 | 5.275310e-57 | -8.615850e-47 |
| Msa0143590 | Msa1055520 | -0.809135 | 2.197276e-50 | -8.615850e-47 |
| Msa0143590 | Msa1056890 | 0.809028 | 2.316241e-50 | -8.615850e-47 |
| Msa0143590 | Msa1066150 | 0.814859 | 1.243291e-51 | -8.615850e-47 |
| Msa0143590 | Msa1068710 | 0.810161 | 1.322824e-50 | -8.615850e-47 |
| Msa0143590 | Msa1068730 | 0.822727 | 2.029311e-53 | -8.615850e-47 |
| Msa0143590 | Msa1068940 | 0.840288 | 9.517798e-58 | -8.615850e-47 |
| Msa0143590 | Msa1068950 | 0.832723 | 8.033457e-56 | -8.615850e-47 |
| Msa0143590 | Msa1078590 | -0.812183 | 4.818184e-51 | -8.615850e-47 |
| Msa0143590 | Msa1078760 | -0.819354 | 1.214021e-52 | -8.615850e-47 |
| Msa0143590 | Msa1078830 | 0.810255 | 1.262210e-50 | -8.615850e-47 |
| Msa0143590 | Msa1082410 | 0.809781 | 1.597232e-50 | -8.615850e-47 |
| Msa0143590 | Msa1088320 | 0.812033 | 5.197516e-51 | -8.615850e-47 |
| Msa0143590 | Msa1088740 | -0.800214 | 1.601066e-48 | -8.615850e-47 |
| Msa0143590 | Msa1096760 | 0.805398 | 1.361213e-49 | -8.615850e-47 |
| Msa0143590 | Msa1106590 | 0.831804 | 1.356200e-55 | -8.615850e-47 |
| Msa0143590 | Msa1108560 | 0.821335 | 4.265721e-53 | -8.615850e-47 |
| Msa0143590 | Msa1119440 | 0.811679 | 6.206781e-51 | -8.615850e-47 |
| Msa0143590 | Msa1129120 | -0.813729 | 2.209000e-51 | -8.615850e-47 |
| Msa0143590 | Msa1132990 | 0.813600 | 2.357541e-51 | -8.615850e-47 |
| Msa0143590 | Msa1140410 | 0.825532 | 4.452112e-54 | -8.615850e-47 |
| Msa0143590 | Msa1147010 | 0.815222 | 1.032302e-51 | -8.615850e-47 |
| Msa0143590 | Msa1149910 | 0.839462 | 1.561746e-57 | -8.615850e-47 |
| Msa0143590 | Msa1156710 | 0.828209 | 1.020884e-54 | -8.615850e-47 |
| Msa0143590 | Msa1156720 | 0.820736 | 5.859806e-53 | -8.615850e-47 |
| Msa0143590 | Msa1156730 | 0.804830 | 1.789552e-49 | -8.615850e-47 |
| Msa0143590 | Msa1165460 | 0.825509 | 4.510023e-54 | -8.615850e-47 |
| Msa0143590 | Msa1169590 | -0.800913 | 1.153223e-48 | -8.615850e-47 |
| Msa0143590 | Msa1181090 | 0.808744 | 2.664565e-50 | -8.615850e-47 |
| Msa0143590 | Msa1190350 | -0.803190 | 3.924151e-49 | -8.615850e-47 |
| Msa0143590 | Msa1191530 | -0.810737 | 9.935361e-51 | -8.615850e-47 |
| Msa0143590 | Msa1192180 | 0.803056 | 4.181793e-49 | -8.615850e-47 |
| Msa0143590 | Msa1192360 | 0.810021 | 1.417811e-50 | -8.615850e-47 |
| Msa0143590 | Msa1199540 | -0.808482 | 3.030924e-50 | -8.615850e-47 |
| Msa0143590 | Msa1203650 | 0.802131 | 6.490073e-49 | -8.615850e-47 |
| Msa0143590 | Msa1205270 | -0.830856 | 2.319844e-55 | -8.615850e-47 |
| Msa0143590 | Msa1206920 | 0.805300 | 1.426538e-49 | -8.615850e-47 |
| Msa0143590 | Msa1207330 | 0.812036 | 5.188195e-51 | -8.615850e-47 |
| Msa0143590 | Msa1215390 | 0.809828 | 1.559893e-50 | -8.615850e-47 |
| Msa0143590 | Msa1217890 | 0.819466 | 1.144469e-52 | -8.615850e-47 |
| Msa0143590 | Msa1240490 | 0.812446 | 4.221964e-51 | -8.615850e-47 |
| Msa0143590 | Msa1250660 | 0.807474 | 4.965768e-50 | -8.615850e-47 |
| Msa0143590 | Msa1253520 | 0.809274 | 2.051687e-50 | -8.615850e-47 |
| Msa0143590 | Msa1257200 | 0.812945 | 3.284375e-51 | -8.615850e-47 |
| Msa0143590 | Msa1257570 | 0.830386 | 3.023254e-55 | -8.615850e-47 |
| Msa0143590 | Msa1263110 | 0.837577 | 4.789815e-57 | -8.615850e-47 |
| Msa0143590 | Msa1266120 | -0.844806 | 6.017923e-59 | -8.615850e-47 |
| Msa0143590 | Msa1273320 | 0.808995 | 2.355073e-50 | -8.615850e-47 |
| Msa0143590 | Msa1279200 | -0.808222 | 3.443367e-50 | -8.615850e-47 |
| Msa0143590 | Msa1281780 | 0.823552 | 1.302699e-53 | -8.615850e-47 |
| Msa0143590 | Msa1283600 | 0.800038 | 1.738290e-48 | -8.615850e-47 |
| Msa0143590 | Msa1284020 | 0.832726 | 8.017519e-56 | -8.615850e-47 |
| Msa0143590 | Msa1286860 | -0.827900 | 1.211904e-54 | -8.615850e-47 |
| Msa0143590 | Msa1295210 | -0.822579 | 2.196281e-53 | -8.615850e-47 |
| Msa0143590 | Msa1297220 | -0.819618 | 1.056581e-52 | -8.615850e-47 |
| Msa0143590 | Msa1311370 | 0.812072 | 5.096100e-51 | -8.615850e-47 |
| Msa0143590 | Msa1313250 | 0.805545 | 1.267810e-49 | -8.615850e-47 |
| Msa0143590 | Msa1322960 | 0.802127 | 6.501661e-49 | -8.615850e-47 |
| Msa0143590 | Msa1322980 | 0.810741 | 9.911292e-51 | -8.615850e-47 |
| Msa0143590 | Msa1323070 | 0.807404 | 5.138357e-50 | -8.615850e-47 |
| Msa0143590 | Msa1323260 | -0.829818 | 4.159789e-55 | -8.615850e-47 |
| Msa0143590 | Msa1326180 | 0.802367 | 5.801495e-49 | -8.615850e-47 |
| Msa0143590 | Msa1342360 | -0.840638 | 7.708644e-58 | -8.615850e-47 |
| Msa0143590 | Msa1354370 | -0.803671 | 3.119209e-49 | -8.615850e-47 |
| Msa0143590 | Msa1360260 | 0.810555 | 1.087574e-50 | -8.615850e-47 |
| Msa0143590 | Msa1361980 | 0.840363 | 9.096576e-58 | -8.615850e-47 |
| Msa0143590 | Msa1365820 | 0.858678 | 6.987794e-63 | -8.615850e-47 |
| Msa0143590 | Msa1366140 | -0.804947 | 1.691644e-49 | -8.615850e-47 |
| Msa0143590 | Msa1368390 | 0.854052 | 1.591443e-61 | -8.615850e-47 |
| Msa0143590 | Msa1368420 | 0.811991 | 5.308135e-51 | -8.615850e-47 |
| Msa0143590 | Msa1375130 | 0.823899 | 1.080556e-53 | -8.615850e-47 |
| Msa0143590 | Msa1383220 | 0.808895 | 2.473175e-50 | -8.615850e-47 |
| Msa0143590 | Msa1383820 | 0.811157 | 8.056167e-51 | -8.615850e-47 |
| Msa0143590 | Msa1384970 | -0.820789 | 5.695923e-53 | -8.615850e-47 |
| Msa0143590 | Msa1388720 | -0.814200 | 1.738968e-51 | -8.615850e-47 |
| Msa0143590 | Msa1400300 | 0.805097 | 1.573788e-49 | -8.615850e-47 |
| Msa0143590 | Msa1405830 | 0.865225 | 6.890044e-65 | -8.615850e-47 |
| Msa0143590 | Msa1407810 | 0.851859 | 6.744334e-61 | -8.615850e-47 |
| Msa0143590 | Msa1408860 | -0.813170 | 2.930809e-51 | -8.615850e-47 |
| Msa0143590 | Msa1413130 | 0.810807 | 9.591795e-51 | -8.615850e-47 |
| Msa0143590 | Msa1413150 | 0.803180 | 3.942468e-49 | -8.615850e-47 |
| Msa0143590 | Msa1414780 | -0.816612 | 5.056088e-52 | -8.615850e-47 |
| Msa0143590 | Msa1422860 | 0.811296 | 7.516326e-51 | -8.615850e-47 |
| Msa0143590 | Msa1429470 | 0.802968 | 4.361657e-49 | -8.615850e-47 |
| Msa0143590 | Msa1433360 | 0.846758 | 1.776202e-59 | -8.615850e-47 |
| Msa0143590 | Msa1437780 | 0.852082 | 5.829665e-61 | -8.615850e-47 |
| Msa0143590 | Msa1445530 | 0.800656 | 1.300921e-48 | -8.615850e-47 |
| Msa0143590 | Msa1447100 | 0.801083 | 1.064359e-48 | -8.615850e-47 |
| Msa0143590 | Msa1455360 | 0.823133 | 1.631574e-53 | -8.615850e-47 |
| Msa0143590 | Msa1457770 | 0.862489 | 4.888970e-64 | -8.615850e-47 |
| Msa0143590 | Msa1464880 | 0.805225 | 1.479359e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143590 | MtrunA17_Chr7g0225191 | 91.511 | 589 | 16 | 1 | 1 | 555 | 1 | 589 | 0.0 | 1033 |
| Msa0143590 | MtrunA17_Chr3g0132161 | 47.138 | 594 | 233 | 7 | 1 | 548 | 1 | 559 | 1.45e-174 | 505 |
| Msa0143590 | MtrunA17_Chr2g0304561 | 33.566 | 572 | 323 | 9 | 16 | 552 | 13 | 562 | 3.36e-96 | 304 |
| Msa0143590 | MtrunA17_Chr4g0064981 | 33.105 | 583 | 324 | 10 | 13 | 552 | 9 | 568 | 4.82e-94 | 298 |
| Msa0143590 | MtrunA17_Chr1g0210274 | 32.474 | 582 | 313 | 10 | 1 | 542 | 15 | 556 | 2.55e-87 | 281 |
| Msa0143590 | MtrunA17_Chr4g0037301 | 31.690 | 568 | 309 | 8 | 14 | 546 | 14 | 537 | 1.55e-86 | 278 |
| Msa0143590 | MtrunA17_Chr1g0171591 | 32.021 | 584 | 310 | 10 | 15 | 548 | 24 | 570 | 1.81e-86 | 279 |
| Msa0143590 | MtrunA17_Chr5g0405621 | 32.230 | 574 | 296 | 8 | 15 | 551 | 13 | 530 | 1.92e-85 | 275 |
| Msa0143590 | MtrunA17_Chr1g0210284 | 31.724 | 580 | 320 | 9 | 1 | 542 | 15 | 556 | 1.62e-83 | 271 |
| Msa0143590 | MtrunA17_Chr1g0210291 | 31.803 | 588 | 311 | 13 | 1 | 542 | 11 | 554 | 4.22e-82 | 268 |
| Msa0143590 | MtrunA17_Chr1g0174101 | 31.810 | 591 | 313 | 11 | 5 | 548 | 14 | 561 | 7.15e-82 | 267 |
| Msa0143590 | MtrunA17_Chr7g0264861 | 31.196 | 577 | 319 | 7 | 11 | 542 | 25 | 568 | 4.64e-81 | 265 |
| Msa0143590 | MtrunA17_Chr5g0442481 | 29.932 | 588 | 307 | 12 | 11 | 555 | 7 | 532 | 3.34e-73 | 243 |
| Msa0143590 | MtrunA17_Chr2g0330551 | 29.402 | 585 | 295 | 12 | 14 | 542 | 6 | 528 | 4.22e-73 | 243 |
| Msa0143590 | MtrunA17_Chr2g0333371 | 32.258 | 341 | 166 | 9 | 231 | 552 | 4 | 298 | 4.60e-43 | 156 |
| Msa0143590 | MtrunA17_Chr7g0251871 | 23.260 | 589 | 367 | 15 | 15 | 553 | 7 | 560 | 6.45e-36 | 141 |
| Msa0143590 | MtrunA17_Chr5g0408921 | 24.433 | 573 | 367 | 13 | 15 | 542 | 7 | 558 | 3.08e-33 | 134 |
| Msa0143590 | MtrunA17_Chr3g0106801 | 23.374 | 569 | 336 | 12 | 15 | 544 | 7 | 514 | 2.73e-32 | 130 |
| Msa0143590 | MtrunA17_Chr3g0106821 | 25.575 | 391 | 251 | 6 | 15 | 402 | 7 | 360 | 1.11e-24 | 105 |
| Msa0143590 | MtrunA17_Chr8g0369621 | 29.944 | 177 | 121 | 3 | 15 | 190 | 48 | 222 | 4.22e-16 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143590 | AT5G14120.1 | 65.188 | 586 | 155 | 5 | 2 | 549 | 3 | 577 | 0.0 | 739 |
| Msa0143590 | AT3G01930.2 | 64.286 | 588 | 156 | 5 | 5 | 549 | 6 | 582 | 0.0 | 733 |
| Msa0143590 | AT3G01930.1 | 61.875 | 480 | 129 | 5 | 113 | 549 | 1 | 469 | 0.0 | 565 |
| Msa0143590 | AT3G01930.3 | 69.797 | 394 | 110 | 3 | 5 | 389 | 6 | 399 | 0.0 | 536 |
| Msa0143590 | AT5G50630.1 | 44.048 | 588 | 240 | 8 | 1 | 550 | 2 | 538 | 1.84e-164 | 479 |
| Msa0143590 | AT5G50520.1 | 44.048 | 588 | 240 | 8 | 1 | 550 | 2 | 538 | 1.84e-164 | 479 |
| Msa0143590 | AT2G39210.1 | 32.881 | 590 | 316 | 8 | 3 | 548 | 9 | 562 | 3.50e-96 | 305 |
| Msa0143590 | AT1G80530.1 | 33.277 | 589 | 320 | 8 | 1 | 552 | 1 | 553 | 7.31e-93 | 295 |
| Msa0143590 | AT2G28120.1 | 32.594 | 586 | 308 | 13 | 8 | 548 | 10 | 553 | 4.48e-89 | 286 |
| Msa0143590 | AT4G34950.1 | 30.809 | 581 | 323 | 8 | 15 | 552 | 16 | 560 | 3.89e-88 | 283 |
| Msa0143590 | AT2G16660.1 | 31.634 | 569 | 303 | 8 | 15 | 546 | 14 | 533 | 7.02e-81 | 263 |
| Msa0143590 | AT1G74780.1 | 29.110 | 584 | 294 | 9 | 13 | 542 | 5 | 522 | 7.30e-72 | 239 |
| Msa0143590 | AT1G18940.1 | 27.304 | 586 | 305 | 7 | 13 | 548 | 7 | 521 | 1.25e-68 | 231 |
| Msa0143590 | AT2G34350.1 | 27.551 | 588 | 311 | 10 | 13 | 552 | 5 | 525 | 2.17e-68 | 230 |
| Msa0143590 | AT2G34350.2 | 27.551 | 588 | 311 | 10 | 13 | 552 | 5 | 525 | 2.17e-68 | 230 |
| Msa0143590 | AT2G34355.1 | 27.041 | 588 | 312 | 11 | 13 | 552 | 5 | 523 | 1.56e-62 | 214 |
| Msa0143590 | AT2G16660.2 | 33.333 | 372 | 214 | 6 | 15 | 383 | 14 | 354 | 7.04e-52 | 182 |
| Msa0143590 | AT2G34355.2 | 26.531 | 441 | 215 | 10 | 152 | 552 | 2 | 373 | 2.45e-36 | 139 |
| Msa0143590 | AT4G19450.1 | 25.000 | 548 | 342 | 17 | 15 | 516 | 7 | 531 | 7.77e-32 | 130 |
| Msa0143590 | AT3G01630.1 | 24.055 | 582 | 333 | 15 | 15 | 545 | 23 | 546 | 2.29e-29 | 122 |
| Msa0143590 | AT3G01630.2 | 24.055 | 582 | 333 | 15 | 15 | 545 | 41 | 564 | 3.64e-29 | 122 |
| Msa0143590 | AT1G31470.1 | 22.145 | 578 | 348 | 14 | 15 | 545 | 43 | 565 | 8.81e-28 | 118 |
| Msa0143590 | AT4G19450.2 | 26.178 | 382 | 263 | 9 | 15 | 385 | 7 | 380 | 2.67e-26 | 111 |
| Msa0143590 | AT2G30300.1 | 24.211 | 570 | 310 | 13 | 16 | 543 | 8 | 497 | 2.96e-26 | 112 |
| Msa0143590 | AT5G45275.1 | 31.429 | 175 | 115 | 2 | 15 | 187 | 7 | 178 | 2.64e-21 | 98.2 |
Find 152 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGATTGTCCTTCTGTTTC+TGG | 0.103789 | 1_4:-2584193 | None:intergenic |
| AAGTTCCTGTTCTTCCTTTA+TGG | 0.160040 | 1_4:+2581105 | Msa0143590:CDS |
| AAATCTTTCACGTTGGTTTA+TGG | 0.174292 | 1_4:+2583983 | Msa0143590:CDS |
| GCTACAGCCTCTGAATTATT+TGG | 0.203666 | 1_4:+2585341 | Msa0143590:CDS |
| TCAGTGTTCATAGTAATAAA+AGG | 0.218491 | 1_4:-2585987 | None:intergenic |
| ATCAATATAACACAAATATT+TGG | 0.228300 | 1_4:-2585880 | None:intergenic |
| ATGGTCTTAGGTTCTGGATC+TGG | 0.228794 | 1_4:+2584451 | Msa0143590:CDS |
| AGTTCCTGTTCTTCCTTTAT+GGG | 0.235007 | 1_4:+2581106 | Msa0143590:CDS |
| CTACTTCAACACAGTTTCTT+TGG | 0.254430 | 1_4:+2583730 | Msa0143590:CDS |
| TCTTTGAATCTTGTTGGTTA+TGG | 0.275308 | 1_4:+2581056 | Msa0143590:CDS |
| ATGATGCTATATTCAGGTTT+TGG | 0.278330 | 1_4:-2585490 | None:intergenic |
| TGAATCTTGTTGGTTATGGC+TGG | 0.301515 | 1_4:+2581060 | Msa0143590:CDS |
| GGTTTCTCCACTTGTTCTAT+AGG | 0.305624 | 1_4:+2585945 | Msa0143590:three_prime_UTR |
| CTTGTTGGCTGCTTATTTGA+TGG | 0.308655 | 1_4:+2584015 | Msa0143590:CDS |
| GCTGGTATAGGATATTTATT+TGG | 0.314259 | 1_4:+2580879 | Msa0143590:CDS |
| ATTGTTTATGCTAGCTTGTA+TGG | 0.317743 | 1_4:+2585650 | Msa0143590:CDS |
| ATTTCCATGGTCTTAGGTTC+TGG | 0.350122 | 1_4:+2584445 | Msa0143590:CDS |
| GGGAGGGAGGGGCAGAAAAG+AGG | 0.351177 | 1_4:-2580655 | None:intergenic |
| TACTTTCTAAAGTATAATAA+TGG | 0.356005 | 1_4:-2585732 | None:intergenic |
| GTTTCTCCACTTGTTCTATA+GGG | 0.356234 | 1_4:+2585946 | Msa0143590:three_prime_UTR |
| GACTTGGTTACGGTGCTCAT+TGG | 0.360347 | 1_4:+2585306 | Msa0143590:CDS |
| TCATGCATCGTTAATATTCA+TGG | 0.366980 | 1_4:+2583871 | Msa0143590:CDS |
| ACAAGTAACGCAGCCCAAAT+AGG | 0.367045 | 1_4:-2581026 | None:intergenic |
| ATTTGGGCTGCGTTACTTGT+TGG | 0.369726 | 1_4:+2581029 | Msa0143590:CDS |
| GCAGCTAATGCAGCTGGTCT+TGG | 0.373732 | 1_4:-2585200 | None:intergenic |
| TTCAAAATTTCCCGAAAAGC+CGG | 0.380401 | 1_4:+2583762 | Msa0143590:CDS |
| TGCTAGCTGGTAAATCCATT+TGG | 0.381290 | 1_4:-2585829 | None:intergenic |
| CTTATATTTGTGGGAACAAA+TGG | 0.381637 | 1_4:+2583701 | Msa0143590:CDS |
| TGCTTATTTGATGGGAGTTA+TGG | 0.383685 | 1_4:+2584024 | Msa0143590:CDS |
| ATACGAATGATGCTATATTC+AGG | 0.390473 | 1_4:-2585496 | None:intergenic |
| TGGTCTTAGGTTCTGGATCT+GGG | 0.391749 | 1_4:+2584452 | Msa0143590:CDS |
| GGAGCTTCTTTGAATCTTGT+TGG | 0.392765 | 1_4:+2581050 | Msa0143590:CDS |
| TTATGGTGTATGTCTCTTGT+TGG | 0.401325 | 1_4:+2584000 | Msa0143590:CDS |
| GTTGTTGATGAGGGAGGGAG+GGG | 0.408260 | 1_4:-2580666 | None:intergenic |
| TAACCCTATACAAAAGTAGA+TGG | 0.411527 | 1_4:+2580820 | Msa0143590:CDS |
| TACGTTGGCACTTTACTAGT+TGG | 0.411740 | 1_4:+2585284 | Msa0143590:CDS |
| AATATTAACGATGCATGATC+CGG | 0.416556 | 1_4:-2583866 | None:intergenic |
| TTCATTGGCATGGGATGGCC+AGG | 0.416629 | 1_4:+2585254 | Msa0143590:CDS |
| TTACTAGTTGGACTTGGTTA+CGG | 0.418091 | 1_4:+2585296 | Msa0143590:CDS |
| GGAGGGAGGGGCAGAAAAGA+GGG | 0.422753 | 1_4:-2580654 | None:intergenic |
| TTATTTGGTTTAAGAAACTT+TGG | 0.428476 | 1_4:+2585356 | Msa0143590:CDS |
| ATGTGTATTCTTATATTTGT+GGG | 0.431347 | 1_4:+2583692 | Msa0143590:CDS |
| TCAAAATTTCCCGAAAAGCC+GGG | 0.432516 | 1_4:+2583763 | Msa0143590:CDS |
| GAGAAGACAAGAGTTCCAAC+AGG | 0.434937 | 1_4:-2585410 | None:intergenic |
| GGGAGCAAGTCCACTTCCTT+AGG | 0.435147 | 1_4:-2584262 | None:intergenic |
| TTGTTGGCTGCTTATTTGAT+GGG | 0.435499 | 1_4:+2584016 | Msa0143590:CDS |
| ATGTTGTTGATGAGGGAGGG+AGG | 0.436558 | 1_4:-2580668 | None:intergenic |
| AATGACAAAGGAATTATAAT+CGG | 0.440338 | 1_4:-2584124 | None:intergenic |
| CATATGGAACCTTCGCACTT+TGG | 0.443970 | 1_4:-2585545 | None:intergenic |
| ATTCCTTTGTCATTAACCTT+CGG | 0.444957 | 1_4:+2584133 | Msa0143590:CDS |
| TGAAGTAATATTAAGTGAGT+TGG | 0.445671 | 1_4:+2584228 | Msa0143590:CDS |
| AAGGAGCTGTGAGGGTTAAG+AGG | 0.447202 | 1_4:+2584347 | Msa0143590:CDS |
| TGAATCTGTAATAAAAGGGT+TGG | 0.452575 | 1_4:-2580691 | None:intergenic |
| TTGTTGGTTATGGCTGGGTT+TGG | 0.455424 | 1_4:+2581066 | Msa0143590:CDS |
| TTACAATCATGGGCTGGTAT+AGG | 0.458468 | 1_4:+2580867 | Msa0143590:CDS |
| GGATTATGCATTGTTGCGGC+AGG | 0.460540 | 1_4:+2585596 | Msa0143590:CDS |
| ACTTGGTTACGGTGCTCATT+GGG | 0.463235 | 1_4:+2585307 | Msa0143590:CDS |
| GAGCAATGTGGTTACAATCA+TGG | 0.466460 | 1_4:+2580856 | Msa0143590:CDS |
| CTGCCATGATAGTGGATGTC+AGG | 0.467856 | 1_4:-2585574 | None:intergenic |
| CAGTGTTCATAGTAATAAAA+GGG | 0.472193 | 1_4:-2585986 | None:intergenic |
| CTTTAGAAAGTATTTGTAGC+TGG | 0.473608 | 1_4:+2585743 | Msa0143590:three_prime_UTR |
| GCATAATCCTGCCATGATAG+TGG | 0.474193 | 1_4:-2585582 | None:intergenic |
| CAAAGAAACTGTGTTGAAGT+AGG | 0.476111 | 1_4:-2583729 | None:intergenic |
| CGTTTCTGCCTTTCCGACGC+AGG | 0.478111 | 1_4:-2584283 | None:intergenic |
| ACAGCCCATAAAGGAAGAAC+AGG | 0.480902 | 1_4:-2581110 | None:intergenic |
| TAGCATAAACAATCCTTGTT+CGG | 0.485537 | 1_4:-2585640 | None:intergenic |
| TTTGAGTGTGGAAAACCAAA+TGG | 0.486104 | 1_4:+2585814 | Msa0143590:three_prime_UTR |
| TCTCTAGTCTCATTGCTAGT+AGG | 0.486798 | 1_4:+2585429 | Msa0143590:CDS |
| TTGGATGTTGTTGATGAGGG+AGG | 0.489262 | 1_4:-2580672 | None:intergenic |
| AATAATTCAGAGGCTGTAGC+TGG | 0.491533 | 1_4:-2585338 | None:intergenic |
| GGTCCAGCATTGGTAGGAAT+AGG | 0.493698 | 1_4:+2583902 | Msa0143590:CDS |
| ATGTTCATTGTTAGACCTGT+CGG | 0.494988 | 1_4:+2583929 | Msa0143590:CDS |
| CTGCTGCAAGCTGCTGCAGA+AGG | 0.495751 | 1_4:+2584328 | Msa0143590:CDS |
| TTAATATTCATGGTTGCTGT+TGG | 0.497023 | 1_4:+2583881 | Msa0143590:CDS |
| TGTTGTTGATGAGGGAGGGA+GGG | 0.498329 | 1_4:-2580667 | None:intergenic |
| TGGATGTTGTTGATGAGGGA+GGG | 0.502162 | 1_4:-2580671 | None:intergenic |
| AGACCTATTCCTACCAATGC+TGG | 0.505924 | 1_4:-2583905 | None:intergenic |
| GGATGTCAGGAAGAAGCATA+TGG | 0.506273 | 1_4:-2585561 | None:intergenic |
| CCCGAAAAGCCGGGGTCCCG+TGG | 0.506898 | 1_4:+2583772 | Msa0143590:CDS |
| GAATCTTGTTGGTTATGGCT+GGG | 0.508667 | 1_4:+2581061 | Msa0143590:CDS |
| ACTTGTTTGTGACCTCCGAC+AGG | 0.514273 | 1_4:-2583944 | None:intergenic |
| AAAAGCCGGGGTCCCGTGGT+TGG | 0.515273 | 1_4:+2583776 | Msa0143590:CDS |
| AGATGAGAAGCCTAAGGAAG+TGG | 0.515527 | 1_4:+2584252 | Msa0143590:CDS |
| TGTTTCTCGTGTTCCGAACA+AGG | 0.516891 | 1_4:+2585627 | Msa0143590:CDS |
| AGCAATGTGGTTACAATCAT+GGG | 0.517938 | 1_4:+2580857 | Msa0143590:CDS |
| ACGATGCATGATCCGGGGAA+TGG | 0.519353 | 1_4:-2583859 | None:intergenic |
| GGGTTGGATGTTGTTGATGA+GGG | 0.520850 | 1_4:-2580675 | None:intergenic |
| CTGAAATTTGTCCTTATCAG+TGG | 0.522059 | 1_4:+2586006 | Msa0143590:three_prime_UTR |
| ACCGCGTGGAAGCTGCTAGC+TGG | 0.525236 | 1_4:-2585842 | None:intergenic |
| CCCTTTAAAATTCCAACCAC+GGG | 0.526339 | 1_4:-2583788 | None:intergenic |
| CTTCCTGACATCCACTATCA+TGG | 0.528499 | 1_4:+2585571 | Msa0143590:CDS |
| ATCACTCTAGCAAACCCTGT+TGG | 0.532002 | 1_4:+2585395 | Msa0143590:CDS |
| GGTTGCTGTTGGTCCAGCAT+TGG | 0.533114 | 1_4:+2583892 | Msa0143590:CDS |
| AAACAAGTGCGGCCGTCGGA+TGG | 0.533967 | 1_4:+2583959 | Msa0143590:CDS |
| ATAATGGACACCAAAATACT+TGG | 0.535780 | 1_4:-2585716 | None:intergenic |
| GTATCTAGTGCGCTTAATGT+TGG | 0.537346 | 1_4:+2585515 | Msa0143590:CDS |
| ATATTAACGATGCATGATCC+GGG | 0.537574 | 1_4:-2583865 | None:intergenic |
| GCTGTTGGTCCAGCATTGGT+AGG | 0.539156 | 1_4:+2583896 | Msa0143590:CDS |
| GGCACTTTACTAGTTGGACT+TGG | 0.541785 | 1_4:+2585290 | Msa0143590:CDS |
| TGAAATGCAGCTAATGCAGC+TGG | 0.548805 | 1_4:-2585206 | None:intergenic |
| AGAAGTGCTTCTTCCTCTAG+AGG | 0.550119 | 1_4:-2584169 | None:intergenic |
| GTTTCTGCCTTTCCGACGCA+GGG | 0.551610 | 1_4:-2584282 | None:intergenic |
| ACTTGCTCCCTGCGTCGGAA+AGG | 0.554542 | 1_4:+2584275 | Msa0143590:CDS |
| TGCTGCAGAAGGAGCTGTGA+GGG | 0.559996 | 1_4:+2584339 | Msa0143590:CDS |
| AGAGGGATTTGTATATGAGC+TGG | 0.560613 | 1_4:-2580637 | None:intergenic |
| GAATTTCCCTATAGAACAAG+TGG | 0.560916 | 1_4:-2585952 | None:intergenic |
| AAGGGCTTTGCTGGATTGAG+TGG | 0.565910 | 1_4:+2583806 | Msa0143590:CDS |
| CTGACATCCACTATCATGGC+AGG | 0.565999 | 1_4:+2585575 | Msa0143590:CDS |
| GAGCTGTGAGGGTTAAGAGG+AGG | 0.567528 | 1_4:+2584350 | Msa0143590:CDS |
| CAAAATTTCCCGAAAAGCCG+GGG | 0.569217 | 1_4:+2583764 | Msa0143590:CDS |
| GAACAAGTGGAGAAACCTCC+TGG | 0.569328 | 1_4:-2585939 | None:intergenic |
| AAATTCCAACCACGGGACCC+CGG | 0.570142 | 1_4:-2583781 | None:intergenic |
| AGTGGACTTGCTCCCTGCGT+CGG | 0.572578 | 1_4:+2584270 | Msa0143590:CDS |
| GGCAGGATTATGCATTGTTG+CGG | 0.574036 | 1_4:+2585592 | Msa0143590:CDS |
| AAAGACCTTGGTGATTGTGT+TGG | 0.574197 | 1_4:+2580972 | Msa0143590:CDS |
| TTTCAACTAGCTATGACTGT+TGG | 0.574245 | 1_4:+2585224 | Msa0143590:CDS |
| GTTGGAAGATGAGAAGCCTA+AGG | 0.577142 | 1_4:+2584246 | Msa0143590:CDS |
| GTCATTAACCTTCGGCCCTG+CGG | 0.579108 | 1_4:+2584141 | Msa0143590:CDS |
| ATACGCAGTTATCCATTCCC+CGG | 0.581249 | 1_4:+2583847 | Msa0143590:CDS |
| GTGAGGGTTAAGAGGAGGAG+AGG | 0.584228 | 1_4:+2584355 | Msa0143590:CDS |
| TCTTAAACCAAATAATTCAG+AGG | 0.585066 | 1_4:-2585348 | None:intergenic |
| GCCCTTTAAAATTCCAACCA+CGG | 0.585494 | 1_4:-2583789 | None:intergenic |
| GAGCAATGAGGATCAGAAAG+AGG | 0.588717 | 1_4:-2584102 | None:intergenic |
| GTAAAATCTTCTCCTCTATG+TGG | 0.590594 | 1_4:-2584379 | None:intergenic |
| AGGGTTGGATGTTGTTGATG+AGG | 0.591128 | 1_4:-2580676 | None:intergenic |
| AGCAAGGCAAATTTGACACC+AGG | 0.593011 | 1_4:+2585921 | Msa0143590:three_prime_UTR |
| ATGTGGTTACAATCATGGGC+TGG | 0.593494 | 1_4:+2580861 | Msa0143590:CDS |
| AGATCCAGAACCTAAGACCA+TGG | 0.600742 | 1_4:-2584449 | None:intergenic |
| GTGCCAACGTACATTGAACC+TGG | 0.605966 | 1_4:-2585272 | None:intergenic |
| AGGAGGAGAGGACCACATAG+AGG | 0.606447 | 1_4:+2584367 | Msa0143590:CDS |
| TTGACTGTAATTGACAATCT+CGG | 0.606676 | 1_4:+2584475 | Msa0143590:CDS |
| GGTGACGCGCCAAAGTGCGA+AGG | 0.621883 | 1_4:+2585536 | Msa0143590:CDS |
| GATGTGTATTCTTATATTTG+TGG | 0.622481 | 1_4:+2583691 | Msa0143590:intron |
| GATTATGCATTGTTGCGGCA+GGG | 0.630180 | 1_4:+2585597 | Msa0143590:CDS |
| GGGCCGAAGGTTAATGACAA+AGG | 0.631796 | 1_4:-2584136 | None:intergenic |
| AAGGCAAATTTGACACCAGG+AGG | 0.635920 | 1_4:+2585924 | Msa0143590:three_prime_UTR |
| TTAGGTGTTGCAAAAGACCT+TGG | 0.637244 | 1_4:+2580960 | Msa0143590:CDS |
| TTTAATCAAAGCTTGCGTCA+AGG | 0.639178 | 1_4:-2584401 | None:intergenic |
| GAAGCAGAGAAACAAGCTCA+TGG | 0.639621 | 1_4:+2585464 | Msa0143590:CDS |
| TCACAAACAAGTGCGGCCGT+CGG | 0.640280 | 1_4:+2583955 | Msa0143590:CDS |
| GCACTTCTTCCAGAAACAGA+AGG | 0.653183 | 1_4:+2584184 | Msa0143590:CDS |
| AAAGAATTCGCAAAACCGCG+TGG | 0.653563 | 1_4:-2585856 | None:intergenic |
| TTCATTGTTAGACCTGTCGG+AGG | 0.667965 | 1_4:+2583932 | Msa0143590:CDS |
| AGAAGACAAGAGTTCCAACA+GGG | 0.668994 | 1_4:-2585409 | None:intergenic |
| TATTAACGATGCATGATCCG+GGG | 0.678287 | 1_4:-2583864 | None:intergenic |
| GGATGGAAAATCTTTCACGT+TGG | 0.680385 | 1_4:+2583976 | Msa0143590:CDS |
| GAATTATAATCGGAGCAATG+AGG | 0.685023 | 1_4:-2584114 | None:intergenic |
| ACCAGCTAGCAGCTTCCACG+CGG | 0.698218 | 1_4:+2585841 | Msa0143590:three_prime_UTR |
| CTGCTGCAGAAGGAGCTGTG+AGG | 0.702176 | 1_4:+2584338 | Msa0143590:CDS |
| TCGGAGGTCACAAACAAGTG+CGG | 0.705441 | 1_4:+2583948 | Msa0143590:CDS |
| TGGCCAGGTTCAATGTACGT+TGG | 0.706240 | 1_4:+2585269 | Msa0143590:CDS |
| GCAGAGAAACAAGCTCATGG+TGG | 0.726436 | 1_4:+2585467 | Msa0143590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTTATTTTGAAACAT+GGG | - | chr1_4:2582873-2582892 | None:intergenic | 10.0% |
| !!! | TAATCAAACTTTTTTTATAT+AGG | - | chr1_4:2585025-2585044 | None:intergenic | 10.0% |
| !!! | ATTTTGAATCTGTAATAAAA+GGG | - | chr1_4:2580698-2580717 | None:intergenic | 15.0% |
| !!! | TTTAATGAACTTTTTATAAC+TGG | - | chr1_4:2580915-2580934 | None:intergenic | 15.0% |
| !!! | TTGACTTTTTACTTTTTTTT+TGG | + | chr1_4:2581139-2581158 | Msa0143590:intron | 15.0% |
| !!! | TTTATTTGTCATGTTTTTTT+TGG | + | chr1_4:2581173-2581192 | Msa0143590:intron | 15.0% |
| !!! | TTTAATGCTACAAATTTTTT+TGG | + | chr1_4:2581623-2581642 | Msa0143590:intron | 15.0% |
| !!! | TTTTCATATATAGTAGATTT+AGG | - | chr1_4:2581675-2581694 | None:intergenic | 15.0% |
| !!! | TTTTTCATTAAAGAAACTTT+AGG | + | chr1_4:2581701-2581720 | Msa0143590:intron | 15.0% |
| !!! | AAATCTTTATTTTGAAACAA+GGG | - | chr1_4:2582714-2582733 | None:intergenic | 15.0% |
| !!! | AAAATCTTTATTTTGAAACA+AGG | - | chr1_4:2582715-2582734 | None:intergenic | 15.0% |
| !!! | CAAAAATTTATTTTGAAACA+TGG | - | chr1_4:2582874-2582893 | None:intergenic | 15.0% |
| !!! | AAATCTTTATTTTGAAACAT+GGG | - | chr1_4:2583032-2583051 | None:intergenic | 15.0% |
| !!! | AAAATCTTTATTTTGAAACA+TGG | - | chr1_4:2582715-2582734 | None:intergenic | 15.0% |
| !! | TAATGTAATAAAGATGTATA+CGG | - | chr1_4:2583602-2583621 | None:intergenic | 15.0% |
| !! | AAGCTATAAATATTTAATCA+GGG | - | chr1_4:2584636-2584655 | None:intergenic | 15.0% |
| !!! | TTAAATATTTATAGCTTGTT+TGG | + | chr1_4:2584639-2584658 | Msa0143590:intron | 15.0% |
| !!! | TTATTTTCACTTTTTTTTCT+TGG | - | chr1_4:2584801-2584820 | None:intergenic | 15.0% |
| !!! | TACTTTCTAAAGTATAATAA+TGG | - | chr1_4:2585735-2585754 | None:intergenic | 15.0% |
| !! | ATCAATATAACACAAATATT+TGG | - | chr1_4:2585883-2585902 | None:intergenic | 15.0% |
| !!! | GATTTTGAATCTGTAATAAA+AGG | - | chr1_4:2580699-2580718 | None:intergenic | 20.0% |
| !! | TTTGTAGTAATTATTTCATG+TGG | + | chr1_4:2581379-2581398 | Msa0143590:intron | 20.0% |
| !! | AATCAGTTACACAAAAAATT+TGG | - | chr1_4:2581407-2581426 | None:intergenic | 20.0% |
| !! | TTTGTAGCATTAAAAAAAAC+TGG | - | chr1_4:2581617-2581636 | None:intergenic | 20.0% |
| !!! | GTTGTTTTGTTTCTTTAATA+TGG | + | chr1_4:2581746-2581765 | Msa0143590:intron | 20.0% |
| !! | TTCTTTAATATGGAAAAACA+AGG | + | chr1_4:2581756-2581775 | Msa0143590:intron | 20.0% |
| !! | TCTTTAATATGGAAAAACAA+GGG | + | chr1_4:2581757-2581776 | Msa0143590:intron | 20.0% |
| !! | AAATGGAATATTCATTTAAG+TGG | - | chr1_4:2581827-2581846 | None:intergenic | 20.0% |
| !!! | GATTTTAACTTTACTCAATT+TGG | + | chr1_4:2582142-2582161 | Msa0143590:intron | 20.0% |
| !! | ATTAAATCAAAACTTTCTCA+AGG | - | chr1_4:2582362-2582381 | None:intergenic | 20.0% |
| !! | TGGACAAAATATTCAAAATA+AGG | + | chr1_4:2582545-2582564 | Msa0143590:intron | 20.0% |
| !! | TACATCTTTATTACATTAAG+AGG | + | chr1_4:2583604-2583623 | Msa0143590:intron | 20.0% |
| !! | ATGTGTATTCTTATATTTGT+GGG | + | chr1_4:2583692-2583711 | Msa0143590:CDS | 20.0% |
| !! | AATGACAAAGGAATTATAAT+CGG | - | chr1_4:2584127-2584146 | None:intergenic | 20.0% |
| !! | CAAGCTATAAATATTTAATC+AGG | - | chr1_4:2584637-2584656 | None:intergenic | 20.0% |
| !!! | TTATTTGGTTTAAGAAACTT+TGG | + | chr1_4:2585356-2585375 | Msa0143590:CDS | 20.0% |
| !!! | CTTGCTTTATTAGAAAAAAA+AGG | - | chr1_4:2585907-2585926 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTCTAATAAAGCA+AGG | + | chr1_4:2585905-2585924 | Msa0143590:three_prime_UTR | 20.0% |
| !! | AAAGATGATGAAGATTTTGA+TGG | - | chr1_4:2580721-2580740 | None:intergenic | 25.0% |
| !!! | AAACCATCTACTTTTGTATA+GGG | - | chr1_4:2580826-2580845 | None:intergenic | 25.0% |
| !! | TGTGTGAAATTTTACCTATT+TGG | + | chr1_4:2581012-2581031 | Msa0143590:CDS | 25.0% |
| !! | GTGTGAAATTTTACCTATTT+GGG | + | chr1_4:2581013-2581032 | Msa0143590:CDS | 25.0% |
| !!! | AAGTTTGACTCTTTTTTTGT+TGG | + | chr1_4:2581220-2581239 | Msa0143590:intron | 25.0% |
| !!! | AGTTTGACTCTTTTTTTGTT+GGG | + | chr1_4:2581221-2581240 | Msa0143590:intron | 25.0% |
| !!! | TGTTACTTTCAATCATAAGA+TGG | + | chr1_4:2581253-2581272 | Msa0143590:intron | 25.0% |
| !!! | ACTGATTTTTTGAGTATGTT+TGG | + | chr1_4:2581420-2581439 | Msa0143590:intron | 25.0% |
| ! | GATTATGTTATGTGCTTATT+TGG | - | chr1_4:2581566-2581585 | None:intergenic | 25.0% |
| !!! | TTTTTTTGGTTGATCATTCA+TGG | + | chr1_4:2581637-2581656 | Msa0143590:intron | 25.0% |
| !!! | TTTTTTGGTTGATCATTCAT+GGG | + | chr1_4:2581638-2581657 | Msa0143590:intron | 25.0% |
| !! | ACCATAATATCTGGAATAAA+GGG | + | chr1_4:2581724-2581743 | Msa0143590:intron | 25.0% |
| !! | AAACAGTCAAAAGCATAAAA+AGG | - | chr1_4:2581927-2581946 | None:intergenic | 25.0% |
| ! | ACAGCATGCTTAAAAAAAAA+AGG | + | chr1_4:2581998-2582017 | Msa0143590:intron | 25.0% |
| ! | AACATGTATACCATTATATC+TGG | - | chr1_4:2582074-2582093 | None:intergenic | 25.0% |
| !! | TTACAGAACTAATCTTCTTT+TGG | + | chr1_4:2582233-2582252 | Msa0143590:intron | 25.0% |
| ! | TTGATTTAATATGTCACACT+TGG | + | chr1_4:2582372-2582391 | Msa0143590:intron | 25.0% |
| !!! | TTTTGGTTTTAGATGTAGTT+TGG | + | chr1_4:2582518-2582537 | Msa0143590:intron | 25.0% |
| !! | AATGTTGTGTTACTAAATAG+AGG | + | chr1_4:2582598-2582617 | Msa0143590:intron | 25.0% |
| !! | AATGTAGTGTTGTTAAATAG+TGG | + | chr1_4:2582917-2582936 | Msa0143590:intron | 25.0% |
| !!! | TTTATTTTGAAACATGGGAT+TGG | - | chr1_4:2582868-2582887 | None:intergenic | 25.0% |
| ! | TAATCCTAATACAAGAAAGT+TGG | + | chr1_4:2583240-2583259 | Msa0143590:intron | 25.0% |
| ! | AATCCTAATACAAGAAAGTT+GGG | + | chr1_4:2583241-2583260 | Msa0143590:intron | 25.0% |
| ! | ACTATAAGAAATCAGTACTA+GGG | - | chr1_4:2583471-2583490 | None:intergenic | 25.0% |
| ! | AACTATAAGAAATCAGTACT+AGG | - | chr1_4:2583472-2583491 | None:intergenic | 25.0% |
| ! | ATCATATAACTTGAACAACA+AGG | - | chr1_4:2583652-2583671 | None:intergenic | 25.0% |
| ! | GATGTGTATTCTTATATTTG+TGG | + | chr1_4:2583691-2583710 | Msa0143590:intron | 25.0% |
| ! | TGAAGTAATATTAAGTGAGT+TGG | + | chr1_4:2584228-2584247 | Msa0143590:CDS | 25.0% |
| !! | CTTTGATTAAAGCAGATTTT+TGG | + | chr1_4:2584413-2584432 | Msa0143590:CDS | 25.0% |
| !! | CAATACAAAGAAAGTTTTCA+TGG | - | chr1_4:2584748-2584767 | None:intergenic | 25.0% |
| ! | AATTAAGCTGTTTATCCAAA+AGG | + | chr1_4:2585103-2585122 | Msa0143590:intron | 25.0% |
| ! | TCTTGTCAAAATTTCTAACA+TGG | + | chr1_4:2585132-2585151 | Msa0143590:intron | 25.0% |
| ! | TCTTAAACCAAATAATTCAG+AGG | - | chr1_4:2585351-2585370 | None:intergenic | 25.0% |
| !!! | ATATGAATATGTTTTGAGTG+TGG | + | chr1_4:2585802-2585821 | Msa0143590:three_prime_UTR | 25.0% |
| ! | CAGTGTTCATAGTAATAAAA+GGG | - | chr1_4:2585989-2586008 | None:intergenic | 25.0% |
| ! | TCAGTGTTCATAGTAATAAA+AGG | - | chr1_4:2585990-2586009 | None:intergenic | 25.0% |
| TGAATCTGTAATAAAAGGGT+TGG | - | chr1_4:2580694-2580713 | None:intergenic | 30.0% | |
| TAACCCTATACAAAAGTAGA+TGG | + | chr1_4:2580820-2580839 | Msa0143590:CDS | 30.0% | |
| !! | CAAACCATCTACTTTTGTAT+AGG | - | chr1_4:2580827-2580846 | None:intergenic | 30.0% |
| !!! | AGTAGATGGTTTGTTTTTGT+AGG | + | chr1_4:2580834-2580853 | Msa0143590:CDS | 30.0% |
| GCTGGTATAGGATATTTATT+TGG | + | chr1_4:2580879-2580898 | Msa0143590:CDS | 30.0% | |
| !! | CAAAAACAACTTGCTATGTT+AGG | + | chr1_4:2580942-2580961 | Msa0143590:CDS | 30.0% |
| !!! | GATTGTGTTGGTTTTTTAAC+TGG | + | chr1_4:2580984-2581003 | Msa0143590:CDS | 30.0% |
| ! | TCTTTGAATCTTGTTGGTTA+TGG | + | chr1_4:2581056-2581075 | Msa0143590:CDS | 30.0% |
| !!! | GTTTGACTCTTTTTTTGTTG+GGG | + | chr1_4:2581222-2581241 | Msa0143590:intron | 30.0% |
| ATGAATTTCGTGTGAAATCA+CGG | + | chr1_4:2581450-2581469 | Msa0143590:intron | 30.0% | |
| !! | AACTTTAGGACCATAATATC+TGG | + | chr1_4:2581715-2581734 | Msa0143590:intron | 30.0% |
| ! | GACCATAATATCTGGAATAA+AGG | + | chr1_4:2581723-2581742 | Msa0143590:intron | 30.0% |
| ACCCTTTATTCCAGATATTA+TGG | - | chr1_4:2581728-2581747 | None:intergenic | 30.0% | |
| ACTTTAAATCTAACAGTGAC+AGG | + | chr1_4:2581780-2581799 | Msa0143590:intron | 30.0% | |
| CAAGATTGAGAAAAGAGAAA+TGG | - | chr1_4:2581844-2581863 | None:intergenic | 30.0% | |
| ! | CATTTCTCTTTTCTCAATCT+TGG | + | chr1_4:2581842-2581861 | Msa0143590:intron | 30.0% |
| AAAAGGAGAATGTGAAAGAA+TGG | + | chr1_4:2582015-2582034 | Msa0143590:intron | 30.0% | |
| ! | AATTTTCCCTCCAGATATAA+TGG | + | chr1_4:2582061-2582080 | Msa0143590:intron | 30.0% |
| TGTATACCATTATATCTGGA+GGG | - | chr1_4:2582070-2582089 | None:intergenic | 30.0% | |
| ATGTATACCATTATATCTGG+AGG | - | chr1_4:2582071-2582090 | None:intergenic | 30.0% | |
| ACTTTACTCAATTTGGTTGT+TGG | + | chr1_4:2582149-2582168 | Msa0143590:intron | 30.0% | |
| TGTGACATGATACTAAATCT+TGG | + | chr1_4:2582203-2582222 | Msa0143590:intron | 30.0% | |
| ! | AGAACCAAGATACAACTTTT+AGG | - | chr1_4:2582408-2582427 | None:intergenic | 30.0% |
| !! | TCTTGGTTCTACTTTATGTT+TGG | + | chr1_4:2582418-2582437 | Msa0143590:intron | 30.0% |
| ATGCTAATAAATTTAGGGGA+AGG | + | chr1_4:2582473-2582492 | Msa0143590:intron | 30.0% | |
| TTGTTAAATAACAGCCATGA+TGG | + | chr1_4:2583086-2583105 | Msa0143590:intron | 30.0% | |
| AACACTACACAAATTGCATA+TGG | - | chr1_4:2583140-2583159 | None:intergenic | 30.0% | |
| CACAATCCATGTTTATATTG+TGG | + | chr1_4:2583166-2583185 | Msa0143590:intron | 30.0% | |
| GAAAGTCCACAATATAAACA+TGG | - | chr1_4:2583175-2583194 | None:intergenic | 30.0% | |
| ATTACCTACAATGTTGTCAT+TGG | - | chr1_4:2583224-2583243 | None:intergenic | 30.0% | |
| ATGTTGCAAGTGTATATTTG+AGG | + | chr1_4:2583550-2583569 | Msa0143590:intron | 30.0% | |
| CTTATATTTGTGGGAACAAA+TGG | + | chr1_4:2583701-2583720 | Msa0143590:CDS | 30.0% | |
| AATATTAACGATGCATGATC+CGG | - | chr1_4:2583869-2583888 | None:intergenic | 30.0% | |
| TCATGCATCGTTAATATTCA+TGG | + | chr1_4:2583871-2583890 | Msa0143590:CDS | 30.0% | |
| TTAATATTCATGGTTGCTGT+TGG | + | chr1_4:2583881-2583900 | Msa0143590:CDS | 30.0% | |
| !! | AAATCTTTCACGTTGGTTTA+TGG | + | chr1_4:2583983-2584002 | Msa0143590:CDS | 30.0% |
| ATTCCTTTGTCATTAACCTT+CGG | + | chr1_4:2584133-2584152 | Msa0143590:CDS | 30.0% | |
| TTGACTGTAATTGACAATCT+CGG | + | chr1_4:2584475-2584494 | Msa0143590:CDS | 30.0% | |
| ! | ATCAGTATTTGGAACTTTCT+TGG | + | chr1_4:2584550-2584569 | Msa0143590:intron | 30.0% |
| TGGTTTCCTATATAGAACTT+CGG | - | chr1_4:2584728-2584747 | None:intergenic | 30.0% | |
| !! | CTTGGTTCAAAGTTTTGTAT+AGG | - | chr1_4:2584783-2584802 | None:intergenic | 30.0% |
| !! | ATGATGCTATATTCAGGTTT+TGG | - | chr1_4:2585493-2585512 | None:intergenic | 30.0% |
| ATACGAATGATGCTATATTC+AGG | - | chr1_4:2585499-2585518 | None:intergenic | 30.0% | |
| TAGCATAAACAATCCTTGTT+CGG | - | chr1_4:2585643-2585662 | None:intergenic | 30.0% | |
| ! | ATTGTTTATGCTAGCTTGTA+TGG | + | chr1_4:2585650-2585669 | Msa0143590:CDS | 30.0% |
| !! | GATTTTTGGACCAAGTATTT+TGG | + | chr1_4:2585706-2585725 | Msa0143590:three_prime_UTR | 30.0% |
| !! | ATAATGGACACCAAAATACT+TGG | - | chr1_4:2585719-2585738 | None:intergenic | 30.0% |
| !! | CTTTAGAAAGTATTTGTAGC+TGG | + | chr1_4:2585743-2585762 | Msa0143590:three_prime_UTR | 30.0% |
| ! | TTTTAGCATAACCACTGATA+AGG | - | chr1_4:2586020-2586039 | None:intergenic | 30.0% |
| !!! | TTGTTTTTGTAGGAGCAATG+TGG | + | chr1_4:2580844-2580863 | Msa0143590:CDS | 35.0% |
| AGCAATGTGGTTACAATCAT+GGG | + | chr1_4:2580857-2580876 | Msa0143590:CDS | 35.0% | |
| AAAAACCAACACAATCACCA+AGG | - | chr1_4:2580980-2580999 | None:intergenic | 35.0% | |
| AAGTTCCTGTTCTTCCTTTA+TGG | + | chr1_4:2581105-2581124 | Msa0143590:CDS | 35.0% | |
| AGTTCCTGTTCTTCCTTTAT+GGG | + | chr1_4:2581106-2581125 | Msa0143590:CDS | 35.0% | |
| CAAAAACTTACAGCCCATAA+AGG | - | chr1_4:2581122-2581141 | None:intergenic | 35.0% | |
| ! | AACTTTTGCCAAAATCACGA+TGG | + | chr1_4:2581499-2581518 | Msa0143590:intron | 35.0% |
| TAAATCTAACAGTGACAGGA+AGG | + | chr1_4:2581784-2581803 | Msa0143590:intron | 35.0% | |
| !! | TCACTTATTTTTCCACGTGA+TGG | + | chr1_4:2581882-2581901 | Msa0143590:intron | 35.0% |
| ! | ATCTATTTGTTACCATCACG+TGG | - | chr1_4:2581897-2581916 | None:intergenic | 35.0% |
| CATGCTGTAAATCATTACAC+TGG | - | chr1_4:2581986-2582005 | None:intergenic | 35.0% | |
| !!! | AGCATCCGCCATTTTTAAAA+GGG | - | chr1_4:2582458-2582477 | None:intergenic | 35.0% |
| !!! | TAGCATCCGCCATTTTTAAA+AGG | - | chr1_4:2582459-2582478 | None:intergenic | 35.0% |
| ! | TGGCGGATGCTAATAAATTT+AGG | + | chr1_4:2582467-2582486 | Msa0143590:intron | 35.0% |
| GGCGGATGCTAATAAATTTA+GGG | + | chr1_4:2582468-2582487 | Msa0143590:intron | 35.0% | |
| GCGGATGCTAATAAATTTAG+GGG | + | chr1_4:2582469-2582488 | Msa0143590:intron | 35.0% | |
| !!! | TGGTTTTAGATGTAGTTTGG+TGG | + | chr1_4:2582521-2582540 | Msa0143590:intron | 35.0% |
| ! | TTTAGATGTAGTTTGGTGGT+TGG | + | chr1_4:2582525-2582544 | Msa0143590:intron | 35.0% |
| AACACAACATTCATGTGATC+AGG | - | chr1_4:2582589-2582608 | None:intergenic | 35.0% | |
| ! | GTGTTGTTAAATAGTAGCCA+TGG | + | chr1_4:2582765-2582784 | Msa0143590:intron | 35.0% |
| AAATAGTAGCCATGGTAGAA+TGG | + | chr1_4:2582773-2582792 | Msa0143590:intron | 35.0% | |
| AAACATGGGATTGTGACTTA+TGG | - | chr1_4:2582859-2582878 | None:intergenic | 35.0% | |
| GAAACATGGGATTGGAATTA+TGG | - | chr1_4:2583019-2583038 | None:intergenic | 35.0% | |
| ! | AAATAACAGCCATGATGGAA+TGG | + | chr1_4:2583091-2583110 | Msa0143590:intron | 35.0% |
| ACTACACAAATTGCATATGG+AGG | - | chr1_4:2583137-2583156 | None:intergenic | 35.0% | |
| CTACCCAACTTTCTTGTATT+AGG | - | chr1_4:2583247-2583266 | None:intergenic | 35.0% | |
| CGAAAGGAATAACTGGATAA+GGG | - | chr1_4:2583273-2583292 | None:intergenic | 35.0% | |
| TCGAAAGGAATAACTGGATA+AGG | - | chr1_4:2583274-2583293 | None:intergenic | 35.0% | |
| ACTGTTTCGAAAGGAATAAC+TGG | - | chr1_4:2583280-2583299 | None:intergenic | 35.0% | |
| CAAAGAAACTGTGTTGAAGT+AGG | - | chr1_4:2583732-2583751 | None:intergenic | 35.0% | |
| CTACTTCAACACAGTTTCTT+TGG | + | chr1_4:2583730-2583749 | Msa0143590:CDS | 35.0% | |
| TTCAAAATTTCCCGAAAAGC+CGG | + | chr1_4:2583762-2583781 | Msa0143590:CDS | 35.0% | |
| ATATTAACGATGCATGATCC+GGG | - | chr1_4:2583868-2583887 | None:intergenic | 35.0% | |
| ATGTTCATTGTTAGACCTGT+CGG | + | chr1_4:2583929-2583948 | Msa0143590:CDS | 35.0% | |
| TTATGGTGTATGTCTCTTGT+TGG | + | chr1_4:2584000-2584019 | Msa0143590:CDS | 35.0% | |
| ! | TTGTTGGCTGCTTATTTGAT+GGG | + | chr1_4:2584016-2584035 | Msa0143590:CDS | 35.0% |
| TGCTTATTTGATGGGAGTTA+TGG | + | chr1_4:2584024-2584043 | Msa0143590:CDS | 35.0% | |
| GAATTATAATCGGAGCAATG+AGG | - | chr1_4:2584117-2584136 | None:intergenic | 35.0% | |
| GTAAAATCTTCTCCTCTATG+TGG | - | chr1_4:2584382-2584401 | None:intergenic | 35.0% | |
| TTTAATCAAAGCTTGCGTCA+AGG | - | chr1_4:2584404-2584423 | None:intergenic | 35.0% | |
| ! | TTGGCTTCTTTTCATTTCCA+TGG | + | chr1_4:2584432-2584451 | Msa0143590:CDS | 35.0% |
| ! | CTTTTCATTTCCATGGTCTT+AGG | + | chr1_4:2584439-2584458 | Msa0143590:CDS | 35.0% |
| TCGTCTCTATGATCAGTATT+TGG | + | chr1_4:2584539-2584558 | Msa0143590:intron | 35.0% | |
| CTATATAGAACTTCGGAAAC+AGG | - | chr1_4:2584721-2584740 | None:intergenic | 35.0% | |
| CTGTTTCCGAAGTTCTATAT+AGG | + | chr1_4:2584719-2584738 | Msa0143590:intron | 35.0% | |
| TAAACACTTGTGAGGTTGTT+TGG | + | chr1_4:2584906-2584925 | Msa0143590:intron | 35.0% | |
| AAACACTTGTGAGGTTGTTT+GGG | + | chr1_4:2584907-2584926 | Msa0143590:intron | 35.0% | |
| CTTATTTCCTTAAGCTCTCT+AGG | + | chr1_4:2584975-2584994 | Msa0143590:intron | 35.0% | |
| ! | TTGACAAGATTATCGCCTTT+TGG | - | chr1_4:2585121-2585140 | None:intergenic | 35.0% |
| TTTCAACTAGCTATGACTGT+TGG | + | chr1_4:2585224-2585243 | Msa0143590:CDS | 35.0% | |
| ! | ACTGTTGGTCATCTTTTCAT+TGG | + | chr1_4:2585239-2585258 | Msa0143590:CDS | 35.0% |
| ! | TTACTAGTTGGACTTGGTTA+CGG | + | chr1_4:2585296-2585315 | Msa0143590:CDS | 35.0% |
| CAAAAATCACAGATCATCGA+AGG | - | chr1_4:2585694-2585713 | None:intergenic | 35.0% | |
| ! | CTTCGATGATCTGTGATTTT+TGG | + | chr1_4:2585692-2585711 | Msa0143590:exon | 35.0% |
| TTTGAGTGTGGAAAACCAAA+TGG | + | chr1_4:2585814-2585833 | Msa0143590:three_prime_UTR | 35.0% | |
| GTTTCTCCACTTGTTCTATA+GGG | + | chr1_4:2585946-2585965 | Msa0143590:three_prime_UTR | 35.0% | |
| GAATTTCCCTATAGAACAAG+TGG | - | chr1_4:2585955-2585974 | None:intergenic | 35.0% | |
| CTGAAATTTGTCCTTATCAG+TGG | + | chr1_4:2586006-2586025 | Msa0143590:three_prime_UTR | 35.0% | |
| AGAGGGATTTGTATATGAGC+TGG | - | chr1_4:2580640-2580659 | None:intergenic | 40.0% | |
| GAGCAATGTGGTTACAATCA+TGG | + | chr1_4:2580856-2580875 | Msa0143590:CDS | 40.0% | |
| !! | TTACAATCATGGGCTGGTAT+AGG | + | chr1_4:2580867-2580886 | Msa0143590:CDS | 40.0% |
| ! | TTAGGTGTTGCAAAAGACCT+TGG | + | chr1_4:2580960-2580979 | Msa0143590:CDS | 40.0% |
| ! | AAAGACCTTGGTGATTGTGT+TGG | + | chr1_4:2580972-2580991 | Msa0143590:CDS | 40.0% |
| GGAGCTTCTTTGAATCTTGT+TGG | + | chr1_4:2581050-2581069 | Msa0143590:CDS | 40.0% | |
| ! | TGAATCTTGTTGGTTATGGC+TGG | + | chr1_4:2581060-2581079 | Msa0143590:CDS | 40.0% |
| ! | GAATCTTGTTGGTTATGGCT+GGG | + | chr1_4:2581061-2581080 | Msa0143590:CDS | 40.0% |
| ! | TACCATCACCATCGTGATTT+TGG | - | chr1_4:2581510-2581529 | None:intergenic | 40.0% |
| ATCATGTCACATGCTCACAT+GGG | - | chr1_4:2582194-2582213 | None:intergenic | 40.0% | |
| TATCATGTCACATGCTCACA+TGG | - | chr1_4:2582195-2582214 | None:intergenic | 40.0% | |
| ATATGTCACACTTGGCAACA+TGG | + | chr1_4:2582380-2582399 | Msa0143590:intron | 40.0% | |
| GGCACCTAAAAGTTGTATCT+TGG | + | chr1_4:2582401-2582420 | Msa0143590:intron | 40.0% | |
| !!! | CATCCGCCATTTTTAAAAGG+GGG | - | chr1_4:2582456-2582475 | None:intergenic | 40.0% |
| !!! | GCATCCGCCATTTTTAAAAG+GGG | - | chr1_4:2582457-2582476 | None:intergenic | 40.0% |
| AAATAGAGGCCATAGCAGAA+TGG | + | chr1_4:2582612-2582631 | Msa0143590:intron | 40.0% | |
| ! | TTGTTAAGCGTCACTTTCCT+TGG | + | chr1_4:2582669-2582688 | Msa0143590:intron | 40.0% |
| ! | TTTGACTTATAGCACAGCCA+AGG | - | chr1_4:2582689-2582708 | None:intergenic | 40.0% |
| ! | AGTTTGTTTGACGTGAGCAA+AGG | + | chr1_4:2582894-2582913 | Msa0143590:intron | 40.0% |
| ! | GTGTTGTTAAATAGTGGCCA+TGG | + | chr1_4:2582923-2582942 | Msa0143590:intron | 40.0% |
| TTGGAATTATGGTGCCTCTA+CGG | - | chr1_4:2583008-2583027 | None:intergenic | 40.0% | |
| AACACTACTTTCATGTGCTC+AGG | - | chr1_4:2583068-2583087 | None:intergenic | 40.0% | |
| ACAATGTTGTCATTGGCAGA+TGG | - | chr1_4:2583217-2583236 | None:intergenic | 40.0% | |
| TCTGCCAATGACAACATTGT+AGG | + | chr1_4:2583217-2583236 | Msa0143590:intron | 40.0% | |
| GTCTAAGTCACTGTTTCGAA+AGG | - | chr1_4:2583289-2583308 | None:intergenic | 40.0% | |
| TGACACAACACTGATACATG+TGG | - | chr1_4:2583384-2583403 | None:intergenic | 40.0% | |
| TGACACATCAATGAGAGTGA+TGG | - | chr1_4:2583528-2583547 | None:intergenic | 40.0% | |
| TCAAAATTTCCCGAAAAGCC+GGG | + | chr1_4:2583763-2583782 | Msa0143590:CDS | 40.0% | |
| ! | TCCCGTGGTTGGAATTTTAA+AGG | + | chr1_4:2583787-2583806 | Msa0143590:CDS | 40.0% |
| !! | CCCTTTAAAATTCCAACCAC+GGG | - | chr1_4:2583791-2583810 | None:intergenic | 40.0% |
| ! | CCCGTGGTTGGAATTTTAAA+GGG | + | chr1_4:2583788-2583807 | Msa0143590:CDS | 40.0% |
| !! | GCCCTTTAAAATTCCAACCA+CGG | - | chr1_4:2583792-2583811 | None:intergenic | 40.0% |
| !! | GGAATTTTAAAGGGCTTTGC+TGG | + | chr1_4:2583797-2583816 | Msa0143590:CDS | 40.0% |
| TATTAACGATGCATGATCCG+GGG | - | chr1_4:2583867-2583886 | None:intergenic | 40.0% | |
| ! | GTGAAAGATTTTCCATCCGA+CGG | - | chr1_4:2583974-2583993 | None:intergenic | 40.0% |
| GGATGGAAAATCTTTCACGT+TGG | + | chr1_4:2583976-2583995 | Msa0143590:CDS | 40.0% | |
| ! | CTTGTTGGCTGCTTATTTGA+TGG | + | chr1_4:2584015-2584034 | Msa0143590:CDS | 40.0% |
| TGAGATTGTCCTTCTGTTTC+TGG | - | chr1_4:2584196-2584215 | None:intergenic | 40.0% | |
| ! | ATTTCCATGGTCTTAGGTTC+TGG | + | chr1_4:2584445-2584464 | Msa0143590:CDS | 40.0% |
| CATTGTCATATCCCAAAGAC+TGG | - | chr1_4:2584510-2584529 | None:intergenic | 40.0% | |
| AGAAAATCGATTGAGCCCTT+AGG | + | chr1_4:2584855-2584874 | Msa0143590:intron | 40.0% | |
| GCTCAAATAAGCCAACCTAA+GGG | - | chr1_4:2584873-2584892 | None:intergenic | 40.0% | |
| AGCTCAAATAAGCCAACCTA+AGG | - | chr1_4:2584874-2584893 | None:intergenic | 40.0% | |
| TACGAGCATAAACACTTGTG+AGG | + | chr1_4:2584898-2584917 | Msa0143590:intron | 40.0% | |
| ATTTCCTTAAGCTCTCTAGG+AGG | + | chr1_4:2584978-2584997 | Msa0143590:intron | 40.0% | |
| ! | TTTCCTTAAGCTCTCTAGGA+GGG | + | chr1_4:2584979-2584998 | Msa0143590:intron | 40.0% |
| ! | TGGTCATCTTTTCATTGGCA+TGG | + | chr1_4:2585244-2585263 | Msa0143590:CDS | 40.0% |
| ! | GGTCATCTTTTCATTGGCAT+GGG | + | chr1_4:2585245-2585264 | Msa0143590:CDS | 40.0% |
| ! | ATCTTTTCATTGGCATGGGA+TGG | + | chr1_4:2585249-2585268 | Msa0143590:CDS | 40.0% |
| TACGTTGGCACTTTACTAGT+TGG | + | chr1_4:2585284-2585303 | Msa0143590:CDS | 40.0% | |
| AATAATTCAGAGGCTGTAGC+TGG | - | chr1_4:2585341-2585360 | None:intergenic | 40.0% | |
| GCTACAGCCTCTGAATTATT+TGG | + | chr1_4:2585341-2585360 | Msa0143590:CDS | 40.0% | |
| AGAAGACAAGAGTTCCAACA+GGG | - | chr1_4:2585412-2585431 | None:intergenic | 40.0% | |
| TCTCTAGTCTCATTGCTAGT+AGG | + | chr1_4:2585429-2585448 | Msa0143590:CDS | 40.0% | |
| GTATCTAGTGCGCTTAATGT+TGG | + | chr1_4:2585515-2585534 | Msa0143590:CDS | 40.0% | |
| TGCTAGCTGGTAAATCCATT+TGG | - | chr1_4:2585832-2585851 | None:intergenic | 40.0% | |
| GGTTTCTCCACTTGTTCTAT+AGG | + | chr1_4:2585945-2585964 | Msa0143590:three_prime_UTR | 40.0% | |
| ! | TGGATGTTGTTGATGAGGGA+GGG | - | chr1_4:2580674-2580693 | None:intergenic | 45.0% |
| ! | TTGGATGTTGTTGATGAGGG+AGG | - | chr1_4:2580675-2580694 | None:intergenic | 45.0% |
| ! | GGGTTGGATGTTGTTGATGA+GGG | - | chr1_4:2580678-2580697 | None:intergenic | 45.0% |
| AGGGTTGGATGTTGTTGATG+AGG | - | chr1_4:2580679-2580698 | None:intergenic | 45.0% | |
| ATGTGGTTACAATCATGGGC+TGG | + | chr1_4:2580861-2580880 | Msa0143590:CDS | 45.0% | |
| ACAAGTAACGCAGCCCAAAT+AGG | - | chr1_4:2581029-2581048 | None:intergenic | 45.0% | |
| ATTTGGGCTGCGTTACTTGT+TGG | + | chr1_4:2581029-2581048 | Msa0143590:CDS | 45.0% | |
| ! | TTGTTGGTTATGGCTGGGTT+TGG | + | chr1_4:2581066-2581085 | Msa0143590:CDS | 45.0% |
| ACAGCCCATAAAGGAAGAAC+AGG | - | chr1_4:2581113-2581132 | None:intergenic | 45.0% | |
| TGCCAAAATCACGATGGTGA+TGG | + | chr1_4:2581505-2581524 | Msa0143590:intron | 45.0% | |
| !! | GCAGTGCCCCCTTTTAAAAA+TGG | + | chr1_4:2582447-2582466 | Msa0143590:intron | 45.0% |
| !! | GTGCCCCCTTTTAAAAATGG+CGG | + | chr1_4:2582450-2582469 | Msa0143590:intron | 45.0% |
| !!! | GATCTAGGCGGTTTTGGTTT+TGG | + | chr1_4:2582501-2582520 | Msa0143590:intron | 45.0% |
| GCTTAACAAATTGCCTGTGG+TGG | - | chr1_4:2582658-2582677 | None:intergenic | 45.0% | |
| GACGCTTAACAAATTGCCTG+TGG | - | chr1_4:2582661-2582680 | None:intergenic | 45.0% | |
| AAATAGTGGCCATGGCGAAA+TGG | + | chr1_4:2582931-2582950 | Msa0143590:intron | 45.0% | |
| ! | AGATTTTCTGCTAGCCGTTG+TGG | + | chr1_4:2582960-2582979 | Msa0143590:intron | 45.0% |
| ! | GATTTTCTGCTAGCCGTTGT+GGG | + | chr1_4:2582961-2582980 | Msa0143590:intron | 45.0% |
| CACAAATTGCATATGGAGGC+TGG | - | chr1_4:2583133-2583152 | None:intergenic | 45.0% | |
| ATGTTGTCATTGGCAGATGG+CGG | - | chr1_4:2583214-2583233 | None:intergenic | 45.0% | |
| TGTCAAACACTGACACGTGT+CGG | + | chr1_4:2583399-2583418 | Msa0143590:intron | 45.0% | |
| ATCAGTACTAGGGACAACCT+GGG | - | chr1_4:2583461-2583480 | None:intergenic | 45.0% | |
| AATCAGTACTAGGGACAACC+TGG | - | chr1_4:2583462-2583481 | None:intergenic | 45.0% | |
| CAAAATTTCCCGAAAAGCCG+GGG | + | chr1_4:2583764-2583783 | Msa0143590:CDS | 45.0% | |
| ATACGCAGTTATCCATTCCC+CGG | + | chr1_4:2583847-2583866 | Msa0143590:CDS | 45.0% | |
| AGACCTATTCCTACCAATGC+TGG | - | chr1_4:2583908-2583927 | None:intergenic | 45.0% | |
| TTCATTGTTAGACCTGTCGG+AGG | + | chr1_4:2583932-2583951 | Msa0143590:CDS | 45.0% | |
| GAGCAATGAGGATCAGAAAG+AGG | - | chr1_4:2584105-2584124 | None:intergenic | 45.0% | |
| !! | AGAAGTGCTTCTTCCTCTAG+AGG | - | chr1_4:2584172-2584191 | None:intergenic | 45.0% |
| GCACTTCTTCCAGAAACAGA+AGG | + | chr1_4:2584184-2584203 | Msa0143590:CDS | 45.0% | |
| GTTGGAAGATGAGAAGCCTA+AGG | + | chr1_4:2584246-2584265 | Msa0143590:CDS | 45.0% | |
| AGATGAGAAGCCTAAGGAAG+TGG | + | chr1_4:2584252-2584271 | Msa0143590:CDS | 45.0% | |
| AGATCCAGAACCTAAGACCA+TGG | - | chr1_4:2584452-2584471 | None:intergenic | 45.0% | |
| !! | ATGGTCTTAGGTTCTGGATC+TGG | + | chr1_4:2584451-2584470 | Msa0143590:CDS | 45.0% |
| !! | TGGTCTTAGGTTCTGGATCT+GGG | + | chr1_4:2584452-2584471 | Msa0143590:CDS | 45.0% |
| ! | GGTCAGATTAGCCAGTCTTT+GGG | + | chr1_4:2584496-2584515 | Msa0143590:intron | 45.0% |
| TGGAACTTTCTTGGACGTGT+TGG | + | chr1_4:2584559-2584578 | Msa0143590:intron | 45.0% | |
| AACTTTCTTGGACGTGTTGG+AGG | + | chr1_4:2584562-2584581 | Msa0143590:intron | 45.0% | |
| AATCGATTGAGCCCTTAGGT+TGG | + | chr1_4:2584859-2584878 | Msa0143590:intron | 45.0% | |
| ! | TCCGATGTGTTTTACTGAGC+AGG | + | chr1_4:2585165-2585184 | Msa0143590:intron | 45.0% |
| CCCTGCTCAGTAAAACACAT+CGG | - | chr1_4:2585169-2585188 | None:intergenic | 45.0% | |
| ! | CCGATGTGTTTTACTGAGCA+GGG | + | chr1_4:2585166-2585185 | Msa0143590:intron | 45.0% |
| TGAAATGCAGCTAATGCAGC+TGG | - | chr1_4:2585209-2585228 | None:intergenic | 45.0% | |
| GGCACTTTACTAGTTGGACT+TGG | + | chr1_4:2585290-2585309 | Msa0143590:CDS | 45.0% | |
| ACTTGGTTACGGTGCTCATT+GGG | + | chr1_4:2585307-2585326 | Msa0143590:CDS | 45.0% | |
| ATCACTCTAGCAAACCCTGT+TGG | + | chr1_4:2585395-2585414 | Msa0143590:CDS | 45.0% | |
| GAGAAGACAAGAGTTCCAAC+AGG | - | chr1_4:2585413-2585432 | None:intergenic | 45.0% | |
| GAAGCAGAGAAACAAGCTCA+TGG | + | chr1_4:2585464-2585483 | Msa0143590:CDS | 45.0% | |
| CATATGGAACCTTCGCACTT+TGG | - | chr1_4:2585548-2585567 | None:intergenic | 45.0% | |
| ! | GGATGTCAGGAAGAAGCATA+TGG | - | chr1_4:2585564-2585583 | None:intergenic | 45.0% |
| CTTCCTGACATCCACTATCA+TGG | + | chr1_4:2585571-2585590 | Msa0143590:CDS | 45.0% | |
| GCATAATCCTGCCATGATAG+TGG | - | chr1_4:2585585-2585604 | None:intergenic | 45.0% | |
| GGCAGGATTATGCATTGTTG+CGG | + | chr1_4:2585592-2585611 | Msa0143590:CDS | 45.0% | |
| GATTATGCATTGTTGCGGCA+GGG | + | chr1_4:2585597-2585616 | Msa0143590:CDS | 45.0% | |
| TGTTTCTCGTGTTCCGAACA+AGG | + | chr1_4:2585627-2585646 | Msa0143590:CDS | 45.0% | |
| AAAGAATTCGCAAAACCGCG+TGG | - | chr1_4:2585859-2585878 | None:intergenic | 45.0% | |
| AGCAAGGCAAATTTGACACC+AGG | + | chr1_4:2585921-2585940 | Msa0143590:three_prime_UTR | 45.0% | |
| AAGGCAAATTTGACACCAGG+AGG | + | chr1_4:2585924-2585943 | Msa0143590:three_prime_UTR | 45.0% | |
| ! | TGTTGTTGATGAGGGAGGGA+GGG | - | chr1_4:2580670-2580689 | None:intergenic | 50.0% |
| ! | ATGTTGTTGATGAGGGAGGG+AGG | - | chr1_4:2580671-2580690 | None:intergenic | 50.0% |
| TAGGGGAAGGCTTCTGATCT+AGG | + | chr1_4:2582486-2582505 | Msa0143590:intron | 50.0% | |
| ! | GCTTCTGATCTAGGCGGTTT+TGG | + | chr1_4:2582495-2582514 | Msa0143590:intron | 50.0% |
| GATTTCGTTACAGCCACCAC+AGG | + | chr1_4:2582642-2582661 | Msa0143590:intron | 50.0% | |
| GTAGCCATGGTAGAATGGTG+TGG | + | chr1_4:2582778-2582797 | Msa0143590:intron | 50.0% | |
| GCTTCACAAACTGCCTATGG+CGG | - | chr1_4:2582818-2582837 | None:intergenic | 50.0% | |
| ! | TCTGTCATGCCATTTCGCCA+TGG | - | chr1_4:2582943-2582962 | None:intergenic | 50.0% |
| ! | GCTTCACAAAGTGCCCACAA+CGG | - | chr1_4:2582977-2582996 | None:intergenic | 50.0% |
| TATGCCACGCCATTCCATCA+TGG | - | chr1_4:2583103-2583122 | None:intergenic | 50.0% | |
| ! | AGATGGCGGTTTATCGAGGA+TGG | - | chr1_4:2583200-2583219 | None:intergenic | 50.0% |
| ACTCCTTCAATCCGAGGACT+TGG | + | chr1_4:2583430-2583449 | Msa0143590:intron | 50.0% | |
| AAGGGCTTTGCTGGATTGAG+TGG | + | chr1_4:2583806-2583825 | Msa0143590:CDS | 50.0% | |
| !! | GGTCCAGCATTGGTAGGAAT+AGG | + | chr1_4:2583902-2583921 | Msa0143590:CDS | 50.0% |
| ACTTGTTTGTGACCTCCGAC+AGG | - | chr1_4:2583947-2583966 | None:intergenic | 50.0% | |
| TCGGAGGTCACAAACAAGTG+CGG | + | chr1_4:2583948-2583967 | Msa0143590:CDS | 50.0% | |
| GGGCCGAAGGTTAATGACAA+AGG | - | chr1_4:2584139-2584158 | None:intergenic | 50.0% | |
| !! | CCTCTAGAGGTTTTTCCGCA+GGG | - | chr1_4:2584159-2584178 | None:intergenic | 50.0% |
| !! | TCCTCTAGAGGTTTTTCCGC+AGG | - | chr1_4:2584160-2584179 | None:intergenic | 50.0% |
| AAGGAGCTGTGAGGGTTAAG+AGG | + | chr1_4:2584347-2584366 | Msa0143590:CDS | 50.0% | |
| ! | CGGTCAGATTAGCCAGTCTT+TGG | + | chr1_4:2584495-2584514 | Msa0143590:intron | 50.0% |
| TTTCTTGGACGTGTTGGAGG+CGG | + | chr1_4:2584565-2584584 | Msa0143590:intron | 50.0% | |
| AAGCCCTCCTAGAGAGCTTA+AGG | - | chr1_4:2584985-2585004 | None:intergenic | 50.0% | |
| TGGCCAGGTTCAATGTACGT+TGG | + | chr1_4:2585269-2585288 | Msa0143590:CDS | 50.0% | |
| GTGCCAACGTACATTGAACC+TGG | - | chr1_4:2585275-2585294 | None:intergenic | 50.0% | |
| ! | GACTTGGTTACGGTGCTCAT+TGG | + | chr1_4:2585306-2585325 | Msa0143590:CDS | 50.0% |
| GCAGAGAAACAAGCTCATGG+TGG | + | chr1_4:2585467-2585486 | Msa0143590:CDS | 50.0% | |
| !! | CTGCCATGATAGTGGATGTC+AGG | - | chr1_4:2585577-2585596 | None:intergenic | 50.0% |
| CTGACATCCACTATCATGGC+AGG | + | chr1_4:2585575-2585594 | Msa0143590:CDS | 50.0% | |
| GGATTATGCATTGTTGCGGC+AGG | + | chr1_4:2585596-2585615 | Msa0143590:CDS | 50.0% | |
| GAACAAGTGGAGAAACCTCC+TGG | - | chr1_4:2585942-2585961 | None:intergenic | 50.0% | |
| ! | GTTGTTGATGAGGGAGGGAG+GGG | - | chr1_4:2580669-2580688 | None:intergenic | 55.0% |
| GGGAAGGCTTCTGATCTAGG+CGG | + | chr1_4:2582489-2582508 | Msa0143590:intron | 55.0% | |
| GCCATGGTAGAATGGTGTGG+CGG | + | chr1_4:2582781-2582800 | Msa0143590:intron | 55.0% | |
| TCCGCCACACCATTCTACCA+TGG | - | chr1_4:2582785-2582804 | None:intergenic | 55.0% | |
| !! | ATGGTGTGGCGGATTTGTGC+TGG | + | chr1_4:2582792-2582811 | Msa0143590:intron | 55.0% |
| GGCGCTTCACAAACTGCCTA+TGG | - | chr1_4:2582821-2582840 | None:intergenic | 55.0% | |
| ! | TTGTGAAGCGCCACTTGCCA+TGG | + | chr1_4:2582829-2582848 | Msa0143590:intron | 55.0% |
| ! | TGTGAAGCGCCACTTGCCAT+GGG | + | chr1_4:2582830-2582849 | Msa0143590:intron | 55.0% |
| TTGTGACTTATGGCGCCCCA+TGG | - | chr1_4:2582849-2582868 | None:intergenic | 55.0% | |
| TATGGTGCCTCTACGGCAAG+TGG | - | chr1_4:2583001-2583020 | None:intergenic | 55.0% | |
| ! | ACAGCCATGATGGAATGGCG+TGG | + | chr1_4:2583096-2583115 | Msa0143590:intron | 55.0% |
| ! | TGGCAGATGGCGGTTTATCG+AGG | - | chr1_4:2583204-2583223 | None:intergenic | 55.0% |
| ACTGGCACTCCTTCAATCCG+AGG | + | chr1_4:2583424-2583443 | Msa0143590:intron | 55.0% | |
| GCACCAAGTCCTCGGATTGA+AGG | - | chr1_4:2583436-2583455 | None:intergenic | 55.0% | |
| AAATTCCAACCACGGGACCC+CGG | - | chr1_4:2583784-2583803 | None:intergenic | 55.0% | |
| ACGATGCATGATCCGGGGAA+TGG | - | chr1_4:2583862-2583881 | None:intergenic | 55.0% | |
| ! | GGTTGCTGTTGGTCCAGCAT+TGG | + | chr1_4:2583892-2583911 | Msa0143590:CDS | 55.0% |
| !! | GCTGTTGGTCCAGCATTGGT+AGG | + | chr1_4:2583896-2583915 | Msa0143590:CDS | 55.0% |
| TCACAAACAAGTGCGGCCGT+CGG | + | chr1_4:2583955-2583974 | Msa0143590:CDS | 55.0% | |
| GTCATTAACCTTCGGCCCTG+CGG | + | chr1_4:2584141-2584160 | Msa0143590:CDS | 55.0% | |
| CCCTGCGGAAAAACCTCTAG+AGG | + | chr1_4:2584156-2584175 | Msa0143590:CDS | 55.0% | |
| GGGAGCAAGTCCACTTCCTT+AGG | - | chr1_4:2584265-2584284 | None:intergenic | 55.0% | |
| GTTTCTGCCTTTCCGACGCA+GGG | - | chr1_4:2584285-2584304 | None:intergenic | 55.0% | |
| TGCTGCAGAAGGAGCTGTGA+GGG | + | chr1_4:2584339-2584358 | Msa0143590:CDS | 55.0% | |
| GAGCTGTGAGGGTTAAGAGG+AGG | + | chr1_4:2584350-2584369 | Msa0143590:CDS | 55.0% | |
| GTGAGGGTTAAGAGGAGGAG+AGG | + | chr1_4:2584355-2584374 | Msa0143590:CDS | 55.0% | |
| AGGAGGAGAGGACCACATAG+AGG | + | chr1_4:2584367-2584386 | Msa0143590:CDS | 55.0% | |
| ! | GCAGCTAATGCAGCTGGTCT+TGG | - | chr1_4:2585203-2585222 | None:intergenic | 55.0% |
| TTCATTGGCATGGGATGGCC+AGG | + | chr1_4:2585254-2585273 | Msa0143590:CDS | 55.0% | |
| GGAGGGAGGGGCAGAAAAGA+GGG | - | chr1_4:2580657-2580676 | None:intergenic | 60.0% | |
| GAGGCCATAGCAGAATGGCG+TGG | + | chr1_4:2582617-2582636 | Msa0143590:intron | 60.0% | |
| GCCATAGCAGAATGGCGTGG+CGG | + | chr1_4:2582620-2582639 | Msa0143590:intron | 60.0% | |
| TCCGCCACGCCATTCTGCTA+TGG | - | chr1_4:2582624-2582643 | None:intergenic | 60.0% | |
| ! | GGATTTGTGCTGGCCGCCAT+AGG | + | chr1_4:2582802-2582821 | Msa0143590:intron | 60.0% |
| ! | GTGAAGCGCCACTTGCCATG+GGG | + | chr1_4:2582831-2582850 | Msa0143590:intron | 60.0% |
| TTATGGCGCCCCATGGCAAG+TGG | - | chr1_4:2582842-2582861 | None:intergenic | 60.0% | |
| ! | TGAAGCGCCACTTGCCGTAG+AGG | + | chr1_4:2582991-2583010 | Msa0143590:intron | 60.0% |
| CACTGACACGTGTCGGACAC+TGG | + | chr1_4:2583406-2583425 | Msa0143590:intron | 60.0% | |
| AAACAAGTGCGGCCGTCGGA+TGG | + | chr1_4:2583959-2583978 | Msa0143590:CDS | 60.0% | |
| ! | AGGTTTTTCCGCAGGGCCGA+AGG | - | chr1_4:2584152-2584171 | None:intergenic | 60.0% |
| ! | AGTGGACTTGCTCCCTGCGT+CGG | + | chr1_4:2584270-2584289 | Msa0143590:CDS | 60.0% |
| ACTTGCTCCCTGCGTCGGAA+AGG | + | chr1_4:2584275-2584294 | Msa0143590:CDS | 60.0% | |
| CGTTTCTGCCTTTCCGACGC+AGG | - | chr1_4:2584286-2584305 | None:intergenic | 60.0% | |
| CTGCTGCAAGCTGCTGCAGA+AGG | + | chr1_4:2584328-2584347 | Msa0143590:CDS | 60.0% | |
| CTGCTGCAGAAGGAGCTGTG+AGG | + | chr1_4:2584338-2584357 | Msa0143590:CDS | 60.0% | |
| ACCAGCTAGCAGCTTCCACG+CGG | + | chr1_4:2585841-2585860 | Msa0143590:three_prime_UTR | 60.0% | |
| GGGAGGGAGGGGCAGAAAAG+AGG | - | chr1_4:2580658-2580677 | None:intergenic | 65.0% | |
| CCTGGGCAGCACCAAGTCCT+CGG | - | chr1_4:2583444-2583463 | None:intergenic | 65.0% | |
| ! | ACCACGGGACCCCGGCTTTT+CGG | - | chr1_4:2583776-2583795 | None:intergenic | 65.0% |
| AAAAGCCGGGGTCCCGTGGT+TGG | + | chr1_4:2583776-2583795 | Msa0143590:CDS | 65.0% | |
| GGTGACGCGCCAAAGTGCGA+AGG | + | chr1_4:2585536-2585555 | Msa0143590:CDS | 65.0% | |
| ACCGCGTGGAAGCTGCTAGC+TGG | - | chr1_4:2585845-2585864 | None:intergenic | 65.0% | |
| !! | CCGAGGACTTGGTGCTGCCC+AGG | + | chr1_4:2583441-2583460 | Msa0143590:intron | 70.0% |
| ! | CCACGGGACCCCGGCTTTTC+GGG | - | chr1_4:2583775-2583794 | None:intergenic | 70.0% |
| CCCGAAAAGCCGGGGTCCCG+TGG | + | chr1_4:2583772-2583791 | Msa0143590:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 2580621 | 2586190 | 2580621 | ID=Msa0143590;Name=Msa0143590 |
| chr1_4 | mRNA | 2580621 | 2586190 | 2580621 | ID=Msa0143590-mRNA-1;Parent=Msa0143590;Name=Msa0143590-mRNA-1;_AED=0.03;_eAED=0.03;_QI=174|0.5|0.66|1|1|1|3|490|555 |
| chr1_4 | exon | 2580621 | 2581130 | 2580621 | ID=Msa0143590-mRNA-1:exon:1131;Parent=Msa0143590-mRNA-1 |
| chr1_4 | exon | 2583692 | 2584509 | 2583692 | ID=Msa0143590-mRNA-1:exon:1132;Parent=Msa0143590-mRNA-1 |
| chr1_4 | exon | 2585187 | 2586190 | 2585187 | ID=Msa0143590-mRNA-1:exon:1133;Parent=Msa0143590-mRNA-1 |
| chr1_4 | five_prime_UTR | 2580621 | 2580794 | 2580621 | ID=Msa0143590-mRNA-1:five_prime_utr;Parent=Msa0143590-mRNA-1 |
| chr1_4 | CDS | 2580795 | 2581130 | 2580795 | ID=Msa0143590-mRNA-1:cds;Parent=Msa0143590-mRNA-1 |
| chr1_4 | CDS | 2583692 | 2584509 | 2583692 | ID=Msa0143590-mRNA-1:cds;Parent=Msa0143590-mRNA-1 |
| chr1_4 | CDS | 2585187 | 2585700 | 2585187 | ID=Msa0143590-mRNA-1:cds;Parent=Msa0143590-mRNA-1 |
| chr1_4 | three_prime_UTR | 2585701 | 2586190 | 2585701 | ID=Msa0143590-mRNA-1:three_prime_utr;Parent=Msa0143590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
