Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0553700 | RHN61694.1 | 99.770 | 434 | 1 | 0 | 1 | 434 | 28 | 461 | 0.0 | 906 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0553700 | sp|Q9LTR9|NMT1_ARATH | 79.032 | 434 | 91 | 0 | 1 | 434 | 1 | 434 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0553700 | A0A396IBS8 | 99.770 | 434 | 1 | 0 | 1 | 434 | 28 | 461 | 0.0 | 906 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0106370 | Msa0553700 | 0.816852 | 4.465511e-52 | -8.615850e-47 |
| Msa0260950 | Msa0553700 | 0.805250 | 1.461500e-49 | -8.615850e-47 |
| Msa0553700 | Msa0607750 | 0.903804 | 2.374817e-79 | -8.615850e-47 |
| Msa0553700 | Msa0962190 | 0.806638 | 7.463804e-50 | -8.615850e-47 |
| Msa0553700 | Msa1078580 | 0.814443 | 1.536742e-51 | -8.615850e-47 |
| Msa0553700 | Msa1078750 | 0.807176 | 5.744375e-50 | -8.615850e-47 |
| Msa0553700 | Msa1157930 | 0.802297 | 5.998792e-49 | -8.615850e-47 |
| Msa0553700 | Msa1264540 | 0.803967 | 2.707524e-49 | -8.615850e-47 |
| Msa0553700 | Msa1449250 | 0.802822 | 4.674888e-49 | -8.615850e-47 |
| Msa0553700 | Msa1454910 | 0.836777 | 7.672165e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0553700 | MtrunA17_Chr4g0039421 | 99.770 | 434 | 1 | 0 | 1 | 434 | 28 | 461 | 0.0 | 906 |
| Msa0553700 | MtrunA17_Chr2g0299701 | 80.907 | 419 | 76 | 1 | 20 | 434 | 4 | 422 | 0.0 | 722 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0553700 | AT5G57020.1 | 79.032 | 434 | 91 | 0 | 1 | 434 | 1 | 434 | 0.0 | 738 |
| Msa0553700 | AT2G44175.1 | 42.391 | 92 | 48 | 1 | 28 | 119 | 10 | 96 | 2.52e-18 | 80.9 |
Find 110 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGACCAAAGACATAAATTT+TGG | 0.100981 | 4_1:-50947440 | Msa0553700:CDS |
| GCTTTCAAAGTTGAGTAATT+TGG | 0.173591 | 4_1:+50946529 | None:intergenic |
| TCAGTGACCTCGTGAGTTTC+AGG | 0.204412 | 4_1:+50946595 | None:intergenic |
| TTTCCCAAAATTTATGTCTT+TGG | 0.247451 | 4_1:+50947436 | None:intergenic |
| ACCGACATCAATTAGTTTCT+TGG | 0.257794 | 4_1:+50946855 | None:intergenic |
| CTGCGGTTACAAGGCTAATT+AGG | 0.267951 | 4_1:-50946723 | Msa0553700:CDS |
| CTTTCAAAGTTGAGTAATTT+GGG | 0.299469 | 4_1:+50946530 | None:intergenic |
| TCAGCAGGTGCATTTCCATC+TGG | 0.302312 | 4_1:+50947516 | None:intergenic |
| TATAAAGGCAACCATCTTCT+TGG | 0.307468 | 4_1:+50947107 | None:intergenic |
| TGAAGTAGCCCGGAGGTTGC+AGG | 0.313936 | 4_1:+50947163 | None:intergenic |
| CCGTGATGAGGTTGTTAATA+TGG | 0.329122 | 4_1:-50947058 | Msa0553700:CDS |
| CCTCATCACGGACTCGAATT+CGG | 0.339678 | 4_1:+50947070 | None:intergenic |
| TTCTTGAAGGAACTGAAGTT+TGG | 0.345695 | 4_1:-50946379 | Msa0553700:CDS |
| GCGCTGGGCCCTGCAACCTC+CGG | 0.353029 | 4_1:-50947172 | Msa0553700:CDS |
| AAGATGGTTGCCTTTATAAC+AGG | 0.354888 | 4_1:-50947102 | Msa0553700:CDS |
| CCTGGTGTGACTGTTGATTC+TGG | 0.363701 | 4_1:+50946775 | None:intergenic |
| GAATGTTGTCGATAGTTATC+TGG | 0.365092 | 4_1:-50946626 | Msa0553700:CDS |
| ATTCTCCAAGTGCACCCTTC+TGG | 0.370742 | 4_1:+50946960 | None:intergenic |
| TGGAGCATTGGCTTCTTCCT+AGG | 0.375688 | 4_1:-50946651 | Msa0553700:CDS |
| CTCATCACGGACTCGAATTC+GGG | 0.375743 | 4_1:+50947071 | None:intergenic |
| TACTTCACAGCTTGGCATAT+TGG | 0.377050 | 4_1:-50947147 | Msa0553700:CDS |
| CAGCAGGTGCATTTCCATCT+GGG | 0.382043 | 4_1:+50947517 | None:intergenic |
| CCGACATCAATTAGTTTCTT+GGG | 0.382092 | 4_1:+50946856 | None:intergenic |
| GGGTGCACTTGGAGAATATA+TGG | 0.383844 | 4_1:-50946954 | Msa0553700:CDS |
| AAGATGATGAGAACATGTTT+AGG | 0.387407 | 4_1:-50947218 | Msa0553700:CDS |
| CAGTAGCAACTTGCCAATAC+TGG | 0.390437 | 4_1:-50946894 | Msa0553700:CDS |
| GGTGCATTTCCATCTGGGTT+GGG | 0.393200 | 4_1:+50947522 | None:intergenic |
| GGCAGGGATACCTGTTATAA+AGG | 0.401328 | 4_1:+50947092 | None:intergenic |
| GTTTCTCTCGGCTCGGTGCT+CGG | 0.405888 | 4_1:-50946834 | Msa0553700:CDS |
| GTTGGGCAGTTCAAGGATAT+AGG | 0.408153 | 4_1:-50947405 | Msa0553700:CDS |
| CCCCTTATCTGAGGTAAAAC+AGG | 0.409550 | 4_1:-50947343 | Msa0553700:CDS |
| CGCTGGGCCCTGCAACCTCC+GGG | 0.413953 | 4_1:-50947171 | Msa0553700:CDS |
| GCAAAATGAAAGCTTCTTGA+AGG | 0.425222 | 4_1:-50946392 | Msa0553700:CDS |
| TGTTAAAACTTCCAAGAAGA+TGG | 0.425379 | 4_1:-50947118 | Msa0553700:CDS |
| ACCTTCCTAACCTCTATGAA+TGG | 0.426427 | 4_1:-50947311 | Msa0553700:CDS |
| ATATCCTTGAACTGCCCAAC+AGG | 0.427798 | 4_1:+50947408 | None:intergenic |
| TTGGGCAGTTCAAGGATATA+GGG | 0.438419 | 4_1:-50947404 | Msa0553700:CDS |
| AACATAATTGTTAGCAAGAA+GGG | 0.443843 | 4_1:+50947242 | None:intergenic |
| ATCTCTACAACTACCGAGTA+AGG | 0.445048 | 4_1:-50946330 | Msa0553700:CDS |
| ACACTTCCTTCTAGTATCCT+TGG | 0.449112 | 4_1:-50946556 | Msa0553700:CDS |
| CAACATAATTGTTAGCAAGA+AGG | 0.456558 | 4_1:+50947241 | None:intergenic |
| GGTGGTTCGATAGGACCTTC+AGG | 0.457527 | 4_1:+50947369 | None:intergenic |
| TAGAGGTTAGGAAGGTTGTA+TGG | 0.462978 | 4_1:+50947318 | None:intergenic |
| CATTGAAGTCATCAGAGCTT+GGG | 0.467422 | 4_1:-50946303 | Msa0553700:CDS |
| GTTGATAGCAATCCTTCCTC+TGG | 0.471116 | 4_1:-50947567 | Msa0553700:CDS |
| GGGTTGCCAAGGATACTAGA+AGG | 0.472607 | 4_1:+50946550 | None:intergenic |
| TCAACCTGTTGGGCAGTTCA+AGG | 0.473546 | 4_1:-50947412 | Msa0553700:CDS |
| TTCGAAGGAATTTCTGCGCT+GGG | 0.475576 | 4_1:-50947187 | Msa0553700:CDS |
| CACACCAGGGTTTAGAAAGA+TGG | 0.478975 | 4_1:-50946761 | Msa0553700:CDS |
| AGGTGCATTTCCATCTGGGT+TGG | 0.483616 | 4_1:+50947521 | None:intergenic |
| TTTGGGAAACTCAACCTGTT+GGG | 0.485400 | 4_1:-50947422 | Msa0553700:CDS |
| CAGTATTGGCAAGTTGCTAC+TGG | 0.490516 | 4_1:+50946895 | None:intergenic |
| TCAAAGATCTGTGCCAGTAT+TGG | 0.491976 | 4_1:+50946881 | None:intergenic |
| GTCACCTCTTTGATCATGAC+AGG | 0.495174 | 4_1:+50946982 | None:intergenic |
| GTAACCCATTCATAGAGGTT+AGG | 0.503092 | 4_1:+50947306 | None:intergenic |
| CATTCATCAGCTGAAGCAAA+GGG | 0.503326 | 4_1:+50946473 | None:intergenic |
| GGTGACCAGAAGGGTGCACT+TGG | 0.504257 | 4_1:-50946965 | Msa0553700:CDS |
| TTGAGTAATTTGGGTTGCCA+AGG | 0.505565 | 4_1:+50946539 | None:intergenic |
| ATGATGTTCCTGCGGTTACA+AGG | 0.508314 | 4_1:-50946732 | Msa0553700:CDS |
| CCTTCCTAACCTCTATGAAT+GGG | 0.513056 | 4_1:-50947310 | Msa0553700:CDS |
| GGAGCATTGGCTTCTTCCTA+GGG | 0.513324 | 4_1:-50946650 | Msa0553700:CDS |
| GCATTGAAGTCATCAGAGCT+TGG | 0.516250 | 4_1:-50946304 | Msa0553700:CDS |
| ATTCGAAGGAATTTCTGCGC+TGG | 0.519044 | 4_1:-50947188 | Msa0553700:CDS |
| CTCCGGGCTACTTCACAGCT+TGG | 0.520105 | 4_1:-50947155 | Msa0553700:CDS |
| TCACGGACTCGAATTCGGGC+AGG | 0.527541 | 4_1:+50947075 | None:intergenic |
| CCCATTCATAGAGGTTAGGA+AGG | 0.528278 | 4_1:+50947310 | None:intergenic |
| TGCTGAAAGTGATCTTGCAT+TGG | 0.528701 | 4_1:-50947499 | Msa0553700:CDS |
| ACGAAAATGATGTGGAGCAT+TGG | 0.530628 | 4_1:-50946663 | Msa0553700:CDS |
| TGGCAAGTTGCTACTGGTGT+AGG | 0.531802 | 4_1:+50946901 | None:intergenic |
| CATGACAGGAGCAAGCCTCT+TGG | 0.536419 | 4_1:+50946996 | None:intergenic |
| TAATTGATGTCGGTTTCTCT+CGG | 0.541266 | 4_1:-50946846 | Msa0553700:CDS |
| ACTTCAATGCATGCCTTACT+CGG | 0.542030 | 4_1:+50946317 | None:intergenic |
| GAAGTAGCCCGGAGGTTGCA+GGG | 0.543684 | 4_1:+50947164 | None:intergenic |
| TCATTCATCAGCTGAAGCAA+AGG | 0.547013 | 4_1:+50946472 | None:intergenic |
| ATTTCCATCTTTCTAAACCC+TGG | 0.548222 | 4_1:+50946757 | None:intergenic |
| CACGGACTCGAATTCGGGCA+GGG | 0.550332 | 4_1:+50947076 | None:intergenic |
| AAGAATCACTCCTGCTGTGT+AGG | 0.552278 | 4_1:+50946924 | None:intergenic |
| GATGTCGGTTTCTCTCGGCT+CGG | 0.552576 | 4_1:-50946841 | Msa0553700:CDS |
| TGCCAAGCTGTGAAGTAGCC+CGG | 0.554188 | 4_1:+50947153 | None:intergenic |
| CTAATTAGCCTTGTAACCGC+AGG | 0.559185 | 4_1:+50946724 | None:intergenic |
| CCAGAATCAACAGTCACACC+AGG | 0.560206 | 4_1:-50946775 | Msa0553700:CDS |
| TTGTAACCGCAGGAACATCA+TGG | 0.561294 | 4_1:+50946734 | None:intergenic |
| CCCAAGAAACTAATTGATGT+CGG | 0.561835 | 4_1:-50946856 | Msa0553700:CDS |
| ATAGGACCTTCAGGCAAAGT+GGG | 0.564234 | 4_1:+50947378 | None:intergenic |
| TGGCAGGCTGCCTACACAGC+AGG | 0.566798 | 4_1:-50946934 | Msa0553700:CDS |
| CTATCGACAACATTCTCCCT+AGG | 0.573804 | 4_1:+50946634 | None:intergenic |
| TGATCAAAGAGGTGACCAGA+AGG | 0.575360 | 4_1:-50946975 | Msa0553700:CDS |
| AATGCAAGATCACTTTCAGC+AGG | 0.575390 | 4_1:+50947501 | None:intergenic |
| CACAAGTAACCCATTCATAG+AGG | 0.576099 | 4_1:+50947301 | None:intergenic |
| ACTCAAAATCCCAACCCAGA+TGG | 0.582100 | 4_1:-50947531 | Msa0553700:CDS |
| CTGAAGTTTGGACCAGGTGA+TGG | 0.583002 | 4_1:-50946367 | Msa0553700:CDS |
| GTTTAGGTTTAACTATTCGA+AGG | 0.584434 | 4_1:-50947202 | Msa0553700:CDS |
| GATAGGACCTTCAGGCAAAG+TGG | 0.591235 | 4_1:+50947377 | None:intergenic |
| GCACTTGGAGAATATATGGC+AGG | 0.591925 | 4_1:-50946950 | Msa0553700:CDS |
| GGGAACCCCACTTTGCCTGA+AGG | 0.595352 | 4_1:-50947384 | Msa0553700:CDS |
| AAGGAACTGAAGTTTGGACC+AGG | 0.609351 | 4_1:-50946373 | Msa0553700:CDS |
| TCTTCAGGTGATCCAGAGGA+AGG | 0.613470 | 4_1:+50947555 | None:intergenic |
| TAATGAAGTTTACCATCACC+TGG | 0.622265 | 4_1:+50946355 | None:intergenic |
| CCATATTAACAACCTCATCA+CGG | 0.625479 | 4_1:+50947058 | None:intergenic |
| ACAAGAAGCTTCGAACCAAG+AGG | 0.628890 | 4_1:-50947011 | Msa0553700:CDS |
| GATCAAAGAGGTGACCAGAA+GGG | 0.633175 | 4_1:-50946974 | Msa0553700:CDS |
| CCGAATTCGAGTCCGTGATG+AGG | 0.640464 | 4_1:-50947070 | Msa0553700:CDS |
| AGTCTCTTCAGGTGATCCAG+AGG | 0.644950 | 4_1:+50947551 | None:intergenic |
| TGCTCCTGTCATGATCAAAG+AGG | 0.676350 | 4_1:-50946986 | Msa0553700:CDS |
| GGAAATCCATGATGTTCCTG+CGG | 0.677320 | 4_1:-50946740 | Msa0553700:CDS |
| TAGGACCTTCAGGCAAAGTG+GGG | 0.681811 | 4_1:+50947379 | None:intergenic |
| CAGAATCAACAGTCACACCA+GGG | 0.712272 | 4_1:-50946774 | Msa0553700:CDS |
| ATTCATCAGCTGAAGCAAAG+GGG | 0.718075 | 4_1:+50946474 | None:intergenic |
| TGAAAGTCCTGAAACTCACG+AGG | 0.726533 | 4_1:-50946602 | Msa0553700:CDS |
| CAAGCTGTGAAGTAGCCCGG+AGG | 0.761817 | 4_1:+50947156 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTTCCCAAAATTTATGTCTT+TGG | + | chr4_1:50946425-50946444 | None:intergenic | 25.0% |
| ! | AACATAATTGTTAGCAAGAA+GGG | + | chr4_1:50946619-50946638 | None:intergenic | 25.0% |
| ! | CTTTCAAAGTTGAGTAATTT+GGG | + | chr4_1:50947331-50947350 | None:intergenic | 25.0% |
| ! | TTTCCCAAAATTTATGTCTT+TGG | + | chr4_1:50946425-50946444 | None:intergenic | 25.0% |
| ! | AACATAATTGTTAGCAAGAA+GGG | + | chr4_1:50946619-50946638 | None:intergenic | 25.0% |
| ! | CTTTCAAAGTTGAGTAATTT+GGG | + | chr4_1:50947331-50947350 | None:intergenic | 25.0% |
| ! | TCGACCAAAGACATAAATTT+TGG | - | chr4_1:50946418-50946437 | Msa0553700:CDS | 30.0% |
| ! | CGACCAAAGACATAAATTTT+GGG | - | chr4_1:50946419-50946438 | Msa0553700:CDS | 30.0% |
| CAACATAATTGTTAGCAAGA+AGG | + | chr4_1:50946620-50946639 | None:intergenic | 30.0% | |
| AAGATGATGAGAACATGTTT+AGG | - | chr4_1:50946640-50946659 | Msa0553700:CDS | 30.0% | |
| ! | GTTTAGGTTTAACTATTCGA+AGG | - | chr4_1:50946656-50946675 | Msa0553700:CDS | 30.0% |
| TGTTAAAACTTCCAAGAAGA+TGG | - | chr4_1:50946740-50946759 | Msa0553700:CDS | 30.0% | |
| ! | ACATCATTTTCGTCAAAATC+AGG | + | chr4_1:50947188-50947207 | None:intergenic | 30.0% |
| !! | TGATTTTGACGAAAATGATG+TGG | - | chr4_1:50947187-50947206 | Msa0553700:CDS | 30.0% |
| GCTTTCAAAGTTGAGTAATT+TGG | + | chr4_1:50947332-50947351 | None:intergenic | 30.0% | |
| ! | TTATGATGTTTTCAACGCTT+TGG | - | chr4_1:50947436-50947455 | Msa0553700:CDS | 30.0% |
| ! | TCGACCAAAGACATAAATTT+TGG | - | chr4_1:50946418-50946437 | Msa0553700:CDS | 30.0% |
| ! | CGACCAAAGACATAAATTTT+GGG | - | chr4_1:50946419-50946438 | Msa0553700:CDS | 30.0% |
| CAACATAATTGTTAGCAAGA+AGG | + | chr4_1:50946620-50946639 | None:intergenic | 30.0% | |
| AAGATGATGAGAACATGTTT+AGG | - | chr4_1:50946640-50946659 | Msa0553700:CDS | 30.0% | |
| ! | GTTTAGGTTTAACTATTCGA+AGG | - | chr4_1:50946656-50946675 | Msa0553700:CDS | 30.0% |
| TGTTAAAACTTCCAAGAAGA+TGG | - | chr4_1:50946740-50946759 | Msa0553700:CDS | 30.0% | |
| ! | ACATCATTTTCGTCAAAATC+AGG | + | chr4_1:50947188-50947207 | None:intergenic | 30.0% |
| !! | TGATTTTGACGAAAATGATG+TGG | - | chr4_1:50947187-50947206 | Msa0553700:CDS | 30.0% |
| GCTTTCAAAGTTGAGTAATT+TGG | + | chr4_1:50947332-50947351 | None:intergenic | 30.0% | |
| ! | TTATGATGTTTTCAACGCTT+TGG | - | chr4_1:50947436-50947455 | Msa0553700:CDS | 30.0% |
| ! | TCCTGTTTTACCTCAGATAA+GGG | + | chr4_1:50946519-50946538 | None:intergenic | 35.0% |
| ! | TTCCTGTTTTACCTCAGATA+AGG | + | chr4_1:50946520-50946539 | None:intergenic | 35.0% |
| TATAAAGGCAACCATCTTCT+TGG | + | chr4_1:50946754-50946773 | None:intergenic | 35.0% | |
| AAGATGGTTGCCTTTATAAC+AGG | - | chr4_1:50946756-50946775 | Msa0553700:CDS | 35.0% | |
| CCATATTAACAACCTCATCA+CGG | + | chr4_1:50946803-50946822 | None:intergenic | 35.0% | |
| ! | CCGACATCAATTAGTTTCTT+GGG | + | chr4_1:50947005-50947024 | None:intergenic | 35.0% |
| CCCAAGAAACTAATTGATGT+CGG | - | chr4_1:50947002-50947021 | Msa0553700:CDS | 35.0% | |
| ! | ACCGACATCAATTAGTTTCT+TGG | + | chr4_1:50947006-50947025 | None:intergenic | 35.0% |
| !! | TAATTGATGTCGGTTTCTCT+CGG | - | chr4_1:50947012-50947031 | Msa0553700:CDS | 35.0% |
| ATTTCCATCTTTCTAAACCC+TGG | + | chr4_1:50947104-50947123 | None:intergenic | 35.0% | |
| GAATGTTGTCGATAGTTATC+TGG | - | chr4_1:50947232-50947251 | Msa0553700:CDS | 35.0% | |
| GCAAAATGAAAGCTTCTTGA+AGG | - | chr4_1:50947466-50947485 | Msa0553700:CDS | 35.0% | |
| TTCTTGAAGGAACTGAAGTT+TGG | - | chr4_1:50947479-50947498 | Msa0553700:CDS | 35.0% | |
| TAATGAAGTTTACCATCACC+TGG | + | chr4_1:50947506-50947525 | None:intergenic | 35.0% | |
| ! | TCCTGTTTTACCTCAGATAA+GGG | + | chr4_1:50946519-50946538 | None:intergenic | 35.0% |
| ! | TTCCTGTTTTACCTCAGATA+AGG | + | chr4_1:50946520-50946539 | None:intergenic | 35.0% |
| TATAAAGGCAACCATCTTCT+TGG | + | chr4_1:50946754-50946773 | None:intergenic | 35.0% | |
| AAGATGGTTGCCTTTATAAC+AGG | - | chr4_1:50946756-50946775 | Msa0553700:CDS | 35.0% | |
| CCATATTAACAACCTCATCA+CGG | + | chr4_1:50946803-50946822 | None:intergenic | 35.0% | |
| ! | CCGACATCAATTAGTTTCTT+GGG | + | chr4_1:50947005-50947024 | None:intergenic | 35.0% |
| CCCAAGAAACTAATTGATGT+CGG | - | chr4_1:50947002-50947021 | Msa0553700:CDS | 35.0% | |
| ! | ACCGACATCAATTAGTTTCT+TGG | + | chr4_1:50947006-50947025 | None:intergenic | 35.0% |
| !! | TAATTGATGTCGGTTTCTCT+CGG | - | chr4_1:50947012-50947031 | Msa0553700:CDS | 35.0% |
| ATTTCCATCTTTCTAAACCC+TGG | + | chr4_1:50947104-50947123 | None:intergenic | 35.0% | |
| GAATGTTGTCGATAGTTATC+TGG | - | chr4_1:50947232-50947251 | Msa0553700:CDS | 35.0% | |
| GCAAAATGAAAGCTTCTTGA+AGG | - | chr4_1:50947466-50947485 | Msa0553700:CDS | 35.0% | |
| TTCTTGAAGGAACTGAAGTT+TGG | - | chr4_1:50947479-50947498 | Msa0553700:CDS | 35.0% | |
| TAATGAAGTTTACCATCACC+TGG | + | chr4_1:50947506-50947525 | None:intergenic | 35.0% | |
| !! | TTGGGATTTTGAGTCTCTTC+AGG | + | chr4_1:50946321-50946340 | None:intergenic | 40.0% |
| AATGCAAGATCACTTTCAGC+AGG | + | chr4_1:50946360-50946379 | None:intergenic | 40.0% | |
| TGCTGAAAGTGATCTTGCAT+TGG | - | chr4_1:50946359-50946378 | Msa0553700:CDS | 40.0% | |
| !! | TTTTGGGAAACTCAACCTGT+TGG | - | chr4_1:50946435-50946454 | Msa0553700:CDS | 40.0% |
| TTTGGGAAACTCAACCTGTT+GGG | - | chr4_1:50946436-50946455 | Msa0553700:CDS | 40.0% | |
| TTGGGCAGTTCAAGGATATA+GGG | - | chr4_1:50946454-50946473 | Msa0553700:CDS | 40.0% | |
| ! | CTGTTTTACCTCAGATAAGG+GGG | + | chr4_1:50946517-50946536 | None:intergenic | 40.0% |
| ! | CCTGTTTTACCTCAGATAAG+GGG | + | chr4_1:50946518-50946537 | None:intergenic | 40.0% |
| TAGAGGTTAGGAAGGTTGTA+TGG | + | chr4_1:50946543-50946562 | None:intergenic | 40.0% | |
| ACCTTCCTAACCTCTATGAA+TGG | - | chr4_1:50946547-50946566 | Msa0553700:CDS | 40.0% | |
| CCTTCCTAACCTCTATGAAT+GGG | - | chr4_1:50946548-50946567 | Msa0553700:CDS | 40.0% | |
| GTAACCCATTCATAGAGGTT+AGG | + | chr4_1:50946555-50946574 | None:intergenic | 40.0% | |
| CACAAGTAACCCATTCATAG+AGG | + | chr4_1:50946560-50946579 | None:intergenic | 40.0% | |
| TACTTCACAGCTTGGCATAT+TGG | - | chr4_1:50946711-50946730 | Msa0553700:CDS | 40.0% | |
| CCGTGATGAGGTTGTTAATA+TGG | - | chr4_1:50946800-50946819 | Msa0553700:CDS | 40.0% | |
| TCAAAGATCTGTGCCAGTAT+TGG | + | chr4_1:50946980-50946999 | None:intergenic | 40.0% | |
| ACGAAAATGATGTGGAGCAT+TGG | - | chr4_1:50947195-50947214 | Msa0553700:CDS | 40.0% | |
| ACACTTCCTTCTAGTATCCT+TGG | - | chr4_1:50947302-50947321 | Msa0553700:CDS | 40.0% | |
| !! | TTGAGTAATTTGGGTTGCCA+AGG | + | chr4_1:50947322-50947341 | None:intergenic | 40.0% |
| ATTCATCAGCTGAAGCAAAG+GGG | + | chr4_1:50947387-50947406 | None:intergenic | 40.0% | |
| CATTCATCAGCTGAAGCAAA+GGG | + | chr4_1:50947388-50947407 | None:intergenic | 40.0% | |
| TCATTCATCAGCTGAAGCAA+AGG | + | chr4_1:50947389-50947408 | None:intergenic | 40.0% | |
| ATCTCTACAACTACCGAGTA+AGG | - | chr4_1:50947528-50947547 | Msa0553700:CDS | 40.0% | |
| ACTTCAATGCATGCCTTACT+CGG | + | chr4_1:50947544-50947563 | None:intergenic | 40.0% | |
| CATTGAAGTCATCAGAGCTT+GGG | - | chr4_1:50947555-50947574 | Msa0553700:CDS | 40.0% | |
| !! | TTGGGATTTTGAGTCTCTTC+AGG | + | chr4_1:50946321-50946340 | None:intergenic | 40.0% |
| AATGCAAGATCACTTTCAGC+AGG | + | chr4_1:50946360-50946379 | None:intergenic | 40.0% | |
| TGCTGAAAGTGATCTTGCAT+TGG | - | chr4_1:50946359-50946378 | Msa0553700:CDS | 40.0% | |
| !! | TTTTGGGAAACTCAACCTGT+TGG | - | chr4_1:50946435-50946454 | Msa0553700:CDS | 40.0% |
| TTTGGGAAACTCAACCTGTT+GGG | - | chr4_1:50946436-50946455 | Msa0553700:CDS | 40.0% | |
| TTGGGCAGTTCAAGGATATA+GGG | - | chr4_1:50946454-50946473 | Msa0553700:CDS | 40.0% | |
| ! | CTGTTTTACCTCAGATAAGG+GGG | + | chr4_1:50946517-50946536 | None:intergenic | 40.0% |
| ! | CCTGTTTTACCTCAGATAAG+GGG | + | chr4_1:50946518-50946537 | None:intergenic | 40.0% |
| TAGAGGTTAGGAAGGTTGTA+TGG | + | chr4_1:50946543-50946562 | None:intergenic | 40.0% | |
| ACCTTCCTAACCTCTATGAA+TGG | - | chr4_1:50946547-50946566 | Msa0553700:CDS | 40.0% | |
| CCTTCCTAACCTCTATGAAT+GGG | - | chr4_1:50946548-50946567 | Msa0553700:CDS | 40.0% | |
| GTAACCCATTCATAGAGGTT+AGG | + | chr4_1:50946555-50946574 | None:intergenic | 40.0% | |
| CACAAGTAACCCATTCATAG+AGG | + | chr4_1:50946560-50946579 | None:intergenic | 40.0% | |
| TACTTCACAGCTTGGCATAT+TGG | - | chr4_1:50946711-50946730 | Msa0553700:CDS | 40.0% | |
| CCGTGATGAGGTTGTTAATA+TGG | - | chr4_1:50946800-50946819 | Msa0553700:CDS | 40.0% | |
| TCAAAGATCTGTGCCAGTAT+TGG | + | chr4_1:50946980-50946999 | None:intergenic | 40.0% | |
| ACGAAAATGATGTGGAGCAT+TGG | - | chr4_1:50947195-50947214 | Msa0553700:CDS | 40.0% | |
| ACACTTCCTTCTAGTATCCT+TGG | - | chr4_1:50947302-50947321 | Msa0553700:CDS | 40.0% | |
| !! | TTGAGTAATTTGGGTTGCCA+AGG | + | chr4_1:50947322-50947341 | None:intergenic | 40.0% |
| ATTCATCAGCTGAAGCAAAG+GGG | + | chr4_1:50947387-50947406 | None:intergenic | 40.0% | |
| CATTCATCAGCTGAAGCAAA+GGG | + | chr4_1:50947388-50947407 | None:intergenic | 40.0% | |
| TCATTCATCAGCTGAAGCAA+AGG | + | chr4_1:50947389-50947408 | None:intergenic | 40.0% | |
| ATCTCTACAACTACCGAGTA+AGG | - | chr4_1:50947528-50947547 | Msa0553700:CDS | 40.0% | |
| ACTTCAATGCATGCCTTACT+CGG | + | chr4_1:50947544-50947563 | None:intergenic | 40.0% | |
| CATTGAAGTCATCAGAGCTT+GGG | - | chr4_1:50947555-50947574 | Msa0553700:CDS | 40.0% | |
| !! | GTTGATAGCAATCCTTCCTC+TGG | - | chr4_1:50946291-50946310 | Msa0553700:CDS | 45.0% |
| ACTCAAAATCCCAACCCAGA+TGG | - | chr4_1:50946327-50946346 | Msa0553700:CDS | 45.0% | |
| ATATCCTTGAACTGCCCAAC+AGG | + | chr4_1:50946453-50946472 | None:intergenic | 45.0% | |
| GTTGGGCAGTTCAAGGATAT+AGG | - | chr4_1:50946453-50946472 | Msa0553700:CDS | 45.0% | |
| ATAGGACCTTCAGGCAAAGT+GGG | + | chr4_1:50946483-50946502 | None:intergenic | 45.0% | |
| TTTACCTCAGATAAGGGGGT+TGG | + | chr4_1:50946513-50946532 | None:intergenic | 45.0% | |
| ! | CCCCTTATCTGAGGTAAAAC+AGG | - | chr4_1:50946515-50946534 | Msa0553700:CDS | 45.0% |
| CCCATTCATAGAGGTTAGGA+AGG | + | chr4_1:50946551-50946570 | None:intergenic | 45.0% | |
| ATTCGAAGGAATTTCTGCGC+TGG | - | chr4_1:50946670-50946689 | Msa0553700:CDS | 45.0% | |
| TTCGAAGGAATTTCTGCGCT+GGG | - | chr4_1:50946671-50946690 | Msa0553700:CDS | 45.0% | |
| GGCAGGGATACCTGTTATAA+AGG | + | chr4_1:50946769-50946788 | None:intergenic | 45.0% | |
| ACAAGAAGCTTCGAACCAAG+AGG | - | chr4_1:50946847-50946866 | Msa0553700:CDS | 45.0% | |
| TGCTCCTGTCATGATCAAAG+AGG | - | chr4_1:50946872-50946891 | Msa0553700:CDS | 45.0% | |
| GTCACCTCTTTGATCATGAC+AGG | + | chr4_1:50946879-50946898 | None:intergenic | 45.0% | |
| TGATCAAAGAGGTGACCAGA+AGG | - | chr4_1:50946883-50946902 | Msa0553700:CDS | 45.0% | |
| GATCAAAGAGGTGACCAGAA+GGG | - | chr4_1:50946884-50946903 | Msa0553700:CDS | 45.0% | |
| GGGTGCACTTGGAGAATATA+TGG | - | chr4_1:50946904-50946923 | Msa0553700:CDS | 45.0% | |
| GCACTTGGAGAATATATGGC+AGG | - | chr4_1:50946908-50946927 | Msa0553700:CDS | 45.0% | |
| AAGAATCACTCCTGCTGTGT+AGG | + | chr4_1:50946937-50946956 | None:intergenic | 45.0% | |
| !! | CAGTATTGGCAAGTTGCTAC+TGG | + | chr4_1:50946966-50946985 | None:intergenic | 45.0% |
| CAGTAGCAACTTGCCAATAC+TGG | - | chr4_1:50946964-50946983 | Msa0553700:CDS | 45.0% | |
| CAGAATCAACAGTCACACCA+GGG | - | chr4_1:50947084-50947103 | Msa0553700:CDS | 45.0% | |
| CACACCAGGGTTTAGAAAGA+TGG | - | chr4_1:50947097-50947116 | Msa0553700:CDS | 45.0% | |
| GGAAATCCATGATGTTCCTG+CGG | - | chr4_1:50947118-50947137 | Msa0553700:CDS | 45.0% | |
| TTGTAACCGCAGGAACATCA+TGG | + | chr4_1:50947127-50947146 | None:intergenic | 45.0% | |
| ATGATGTTCCTGCGGTTACA+AGG | - | chr4_1:50947126-50947145 | Msa0553700:CDS | 45.0% | |
| !! | CTAATTAGCCTTGTAACCGC+AGG | + | chr4_1:50947137-50947156 | None:intergenic | 45.0% |
| CTGCGGTTACAAGGCTAATT+AGG | - | chr4_1:50947135-50947154 | Msa0553700:CDS | 45.0% | |
| CTATCGACAACATTCTCCCT+AGG | + | chr4_1:50947227-50947246 | None:intergenic | 45.0% | |
| TGAAAGTCCTGAAACTCACG+AGG | - | chr4_1:50947256-50947275 | Msa0553700:CDS | 45.0% | |
| AAGGAACTGAAGTTTGGACC+AGG | - | chr4_1:50947485-50947504 | Msa0553700:CDS | 45.0% | |
| GCATTGAAGTCATCAGAGCT+TGG | - | chr4_1:50947554-50947573 | Msa0553700:CDS | 45.0% | |
| !! | GTTGATAGCAATCCTTCCTC+TGG | - | chr4_1:50946291-50946310 | Msa0553700:CDS | 45.0% |
| ACTCAAAATCCCAACCCAGA+TGG | - | chr4_1:50946327-50946346 | Msa0553700:CDS | 45.0% | |
| ATATCCTTGAACTGCCCAAC+AGG | + | chr4_1:50946453-50946472 | None:intergenic | 45.0% | |
| GTTGGGCAGTTCAAGGATAT+AGG | - | chr4_1:50946453-50946472 | Msa0553700:CDS | 45.0% | |
| ATAGGACCTTCAGGCAAAGT+GGG | + | chr4_1:50946483-50946502 | None:intergenic | 45.0% | |
| TTTACCTCAGATAAGGGGGT+TGG | + | chr4_1:50946513-50946532 | None:intergenic | 45.0% | |
| ! | CCCCTTATCTGAGGTAAAAC+AGG | - | chr4_1:50946515-50946534 | Msa0553700:CDS | 45.0% |
| CCCATTCATAGAGGTTAGGA+AGG | + | chr4_1:50946551-50946570 | None:intergenic | 45.0% | |
| ATTCGAAGGAATTTCTGCGC+TGG | - | chr4_1:50946670-50946689 | Msa0553700:CDS | 45.0% | |
| TTCGAAGGAATTTCTGCGCT+GGG | - | chr4_1:50946671-50946690 | Msa0553700:CDS | 45.0% | |
| GGCAGGGATACCTGTTATAA+AGG | + | chr4_1:50946769-50946788 | None:intergenic | 45.0% | |
| ACAAGAAGCTTCGAACCAAG+AGG | - | chr4_1:50946847-50946866 | Msa0553700:CDS | 45.0% | |
| TGCTCCTGTCATGATCAAAG+AGG | - | chr4_1:50946872-50946891 | Msa0553700:CDS | 45.0% | |
| GTCACCTCTTTGATCATGAC+AGG | + | chr4_1:50946879-50946898 | None:intergenic | 45.0% | |
| TGATCAAAGAGGTGACCAGA+AGG | - | chr4_1:50946883-50946902 | Msa0553700:CDS | 45.0% | |
| GATCAAAGAGGTGACCAGAA+GGG | - | chr4_1:50946884-50946903 | Msa0553700:CDS | 45.0% | |
| GGGTGCACTTGGAGAATATA+TGG | - | chr4_1:50946904-50946923 | Msa0553700:CDS | 45.0% | |
| GCACTTGGAGAATATATGGC+AGG | - | chr4_1:50946908-50946927 | Msa0553700:CDS | 45.0% | |
| AAGAATCACTCCTGCTGTGT+AGG | + | chr4_1:50946937-50946956 | None:intergenic | 45.0% | |
| !! | CAGTATTGGCAAGTTGCTAC+TGG | + | chr4_1:50946966-50946985 | None:intergenic | 45.0% |
| CAGTAGCAACTTGCCAATAC+TGG | - | chr4_1:50946964-50946983 | Msa0553700:CDS | 45.0% | |
| CAGAATCAACAGTCACACCA+GGG | - | chr4_1:50947084-50947103 | Msa0553700:CDS | 45.0% | |
| CACACCAGGGTTTAGAAAGA+TGG | - | chr4_1:50947097-50947116 | Msa0553700:CDS | 45.0% | |
| GGAAATCCATGATGTTCCTG+CGG | - | chr4_1:50947118-50947137 | Msa0553700:CDS | 45.0% | |
| TTGTAACCGCAGGAACATCA+TGG | + | chr4_1:50947127-50947146 | None:intergenic | 45.0% | |
| ATGATGTTCCTGCGGTTACA+AGG | - | chr4_1:50947126-50947145 | Msa0553700:CDS | 45.0% | |
| !! | CTAATTAGCCTTGTAACCGC+AGG | + | chr4_1:50947137-50947156 | None:intergenic | 45.0% |
| CTGCGGTTACAAGGCTAATT+AGG | - | chr4_1:50947135-50947154 | Msa0553700:CDS | 45.0% | |
| CTATCGACAACATTCTCCCT+AGG | + | chr4_1:50947227-50947246 | None:intergenic | 45.0% | |
| TGAAAGTCCTGAAACTCACG+AGG | - | chr4_1:50947256-50947275 | Msa0553700:CDS | 45.0% | |
| AAGGAACTGAAGTTTGGACC+AGG | - | chr4_1:50947485-50947504 | Msa0553700:CDS | 45.0% | |
| GCATTGAAGTCATCAGAGCT+TGG | - | chr4_1:50947554-50947573 | Msa0553700:CDS | 45.0% | |
| TCTTCAGGTGATCCAGAGGA+AGG | + | chr4_1:50946306-50946325 | None:intergenic | 50.0% | |
| AGTCTCTTCAGGTGATCCAG+AGG | + | chr4_1:50946310-50946329 | None:intergenic | 50.0% | |
| GGTGCATTTCCATCTGGGTT+GGG | + | chr4_1:50946339-50946358 | None:intergenic | 50.0% | |
| AGGTGCATTTCCATCTGGGT+TGG | + | chr4_1:50946340-50946359 | None:intergenic | 50.0% | |
| CAGCAGGTGCATTTCCATCT+GGG | + | chr4_1:50946344-50946363 | None:intergenic | 50.0% | |
| TCAGCAGGTGCATTTCCATC+TGG | + | chr4_1:50946345-50946364 | None:intergenic | 50.0% | |
| TCAACCTGTTGGGCAGTTCA+AGG | - | chr4_1:50946446-50946465 | Msa0553700:CDS | 50.0% | |
| TAGGACCTTCAGGCAAAGTG+GGG | + | chr4_1:50946482-50946501 | None:intergenic | 50.0% | |
| GATAGGACCTTCAGGCAAAG+TGG | + | chr4_1:50946484-50946503 | None:intergenic | 50.0% | |
| CTCATCACGGACTCGAATTC+GGG | + | chr4_1:50946790-50946809 | None:intergenic | 50.0% | |
| CCTCATCACGGACTCGAATT+CGG | + | chr4_1:50946791-50946810 | None:intergenic | 50.0% | |
| ATTCTCCAAGTGCACCCTTC+TGG | + | chr4_1:50946901-50946920 | None:intergenic | 50.0% | |
| TGGCAAGTTGCTACTGGTGT+AGG | + | chr4_1:50946960-50946979 | None:intergenic | 50.0% | |
| !! | CCTGGTGTGACTGTTGATTC+TGG | + | chr4_1:50947086-50947105 | None:intergenic | 50.0% |
| CCAGAATCAACAGTCACACC+AGG | - | chr4_1:50947083-50947102 | Msa0553700:CDS | 50.0% | |
| !! | TGGAGCATTGGCTTCTTCCT+AGG | - | chr4_1:50947207-50947226 | Msa0553700:CDS | 50.0% |
| !! | GGAGCATTGGCTTCTTCCTA+GGG | - | chr4_1:50947208-50947227 | Msa0553700:CDS | 50.0% |
| TCAGTGACCTCGTGAGTTTC+AGG | + | chr4_1:50947266-50947285 | None:intergenic | 50.0% | |
| GGGTTGCCAAGGATACTAGA+AGG | + | chr4_1:50947311-50947330 | None:intergenic | 50.0% | |
| CTGAAGTTTGGACCAGGTGA+TGG | - | chr4_1:50947491-50947510 | Msa0553700:CDS | 50.0% | |
| TCTTCAGGTGATCCAGAGGA+AGG | + | chr4_1:50946306-50946325 | None:intergenic | 50.0% | |
| AGTCTCTTCAGGTGATCCAG+AGG | + | chr4_1:50946310-50946329 | None:intergenic | 50.0% | |
| GGTGCATTTCCATCTGGGTT+GGG | + | chr4_1:50946339-50946358 | None:intergenic | 50.0% | |
| AGGTGCATTTCCATCTGGGT+TGG | + | chr4_1:50946340-50946359 | None:intergenic | 50.0% | |
| CAGCAGGTGCATTTCCATCT+GGG | + | chr4_1:50946344-50946363 | None:intergenic | 50.0% | |
| TCAGCAGGTGCATTTCCATC+TGG | + | chr4_1:50946345-50946364 | None:intergenic | 50.0% | |
| TCAACCTGTTGGGCAGTTCA+AGG | - | chr4_1:50946446-50946465 | Msa0553700:CDS | 50.0% | |
| TAGGACCTTCAGGCAAAGTG+GGG | + | chr4_1:50946482-50946501 | None:intergenic | 50.0% | |
| GATAGGACCTTCAGGCAAAG+TGG | + | chr4_1:50946484-50946503 | None:intergenic | 50.0% | |
| CTCATCACGGACTCGAATTC+GGG | + | chr4_1:50946790-50946809 | None:intergenic | 50.0% | |
| CCTCATCACGGACTCGAATT+CGG | + | chr4_1:50946791-50946810 | None:intergenic | 50.0% | |
| ATTCTCCAAGTGCACCCTTC+TGG | + | chr4_1:50946901-50946920 | None:intergenic | 50.0% | |
| TGGCAAGTTGCTACTGGTGT+AGG | + | chr4_1:50946960-50946979 | None:intergenic | 50.0% | |
| !! | CCTGGTGTGACTGTTGATTC+TGG | + | chr4_1:50947086-50947105 | None:intergenic | 50.0% |
| CCAGAATCAACAGTCACACC+AGG | - | chr4_1:50947083-50947102 | Msa0553700:CDS | 50.0% | |
| !! | TGGAGCATTGGCTTCTTCCT+AGG | - | chr4_1:50947207-50947226 | Msa0553700:CDS | 50.0% |
| !! | GGAGCATTGGCTTCTTCCTA+GGG | - | chr4_1:50947208-50947227 | Msa0553700:CDS | 50.0% |
| TCAGTGACCTCGTGAGTTTC+AGG | + | chr4_1:50947266-50947285 | None:intergenic | 50.0% | |
| GGGTTGCCAAGGATACTAGA+AGG | + | chr4_1:50947311-50947330 | None:intergenic | 50.0% | |
| CTGAAGTTTGGACCAGGTGA+TGG | - | chr4_1:50947491-50947510 | Msa0553700:CDS | 50.0% | |
| GGTGGTTCGATAGGACCTTC+AGG | + | chr4_1:50946492-50946511 | None:intergenic | 55.0% | |
| !! | AAGGGGGTTGGTGGTTCGAT+AGG | + | chr4_1:50946501-50946520 | None:intergenic | 55.0% |
| ACCACCAACCCCCTTATCTG+AGG | - | chr4_1:50946506-50946525 | Msa0553700:CDS | 55.0% | |
| ACCTCAGATAAGGGGGTTGG+TGG | + | chr4_1:50946510-50946529 | None:intergenic | 55.0% | |
| TGCCAAGCTGTGAAGTAGCC+CGG | + | chr4_1:50946708-50946727 | None:intergenic | 55.0% | |
| CCGAATTCGAGTCCGTGATG+AGG | - | chr4_1:50946788-50946807 | Msa0553700:CDS | 55.0% | |
| CATGACAGGAGCAAGCCTCT+TGG | + | chr4_1:50946865-50946884 | None:intergenic | 55.0% | |
| !! | GATGTCGGTTTCTCTCGGCT+CGG | - | chr4_1:50947017-50947036 | Msa0553700:CDS | 55.0% |
| GGTGGTTCGATAGGACCTTC+AGG | + | chr4_1:50946492-50946511 | None:intergenic | 55.0% | |
| !! | AAGGGGGTTGGTGGTTCGAT+AGG | + | chr4_1:50946501-50946520 | None:intergenic | 55.0% |
| ACCACCAACCCCCTTATCTG+AGG | - | chr4_1:50946506-50946525 | Msa0553700:CDS | 55.0% | |
| ACCTCAGATAAGGGGGTTGG+TGG | + | chr4_1:50946510-50946529 | None:intergenic | 55.0% | |
| TGCCAAGCTGTGAAGTAGCC+CGG | + | chr4_1:50946708-50946727 | None:intergenic | 55.0% | |
| CCGAATTCGAGTCCGTGATG+AGG | - | chr4_1:50946788-50946807 | Msa0553700:CDS | 55.0% | |
| CATGACAGGAGCAAGCCTCT+TGG | + | chr4_1:50946865-50946884 | None:intergenic | 55.0% | |
| !! | GATGTCGGTTTCTCTCGGCT+CGG | - | chr4_1:50947017-50947036 | Msa0553700:CDS | 55.0% |
| GGGAACCCCACTTTGCCTGA+AGG | - | chr4_1:50946474-50946493 | Msa0553700:CDS | 60.0% | |
| GAAGTAGCCCGGAGGTTGCA+GGG | + | chr4_1:50946697-50946716 | None:intergenic | 60.0% | |
| TGAAGTAGCCCGGAGGTTGC+AGG | + | chr4_1:50946698-50946717 | None:intergenic | 60.0% | |
| CAAGCTGTGAAGTAGCCCGG+AGG | + | chr4_1:50946705-50946724 | None:intergenic | 60.0% | |
| CTCCGGGCTACTTCACAGCT+TGG | - | chr4_1:50946703-50946722 | Msa0553700:CDS | 60.0% | |
| CACGGACTCGAATTCGGGCA+GGG | + | chr4_1:50946785-50946804 | None:intergenic | 60.0% | |
| TCACGGACTCGAATTCGGGC+AGG | + | chr4_1:50946786-50946805 | None:intergenic | 60.0% | |
| ! | GGTGACCAGAAGGGTGCACT+TGG | - | chr4_1:50946893-50946912 | Msa0553700:CDS | 60.0% |
| !! | GTTTCTCTCGGCTCGGTGCT+CGG | - | chr4_1:50947024-50947043 | Msa0553700:CDS | 60.0% |
| GGGAACCCCACTTTGCCTGA+AGG | - | chr4_1:50946474-50946493 | Msa0553700:CDS | 60.0% | |
| GAAGTAGCCCGGAGGTTGCA+GGG | + | chr4_1:50946697-50946716 | None:intergenic | 60.0% | |
| TGAAGTAGCCCGGAGGTTGC+AGG | + | chr4_1:50946698-50946717 | None:intergenic | 60.0% | |
| CAAGCTGTGAAGTAGCCCGG+AGG | + | chr4_1:50946705-50946724 | None:intergenic | 60.0% | |
| CTCCGGGCTACTTCACAGCT+TGG | - | chr4_1:50946703-50946722 | Msa0553700:CDS | 60.0% | |
| CACGGACTCGAATTCGGGCA+GGG | + | chr4_1:50946785-50946804 | None:intergenic | 60.0% | |
| TCACGGACTCGAATTCGGGC+AGG | + | chr4_1:50946786-50946805 | None:intergenic | 60.0% | |
| ! | GGTGACCAGAAGGGTGCACT+TGG | - | chr4_1:50946893-50946912 | Msa0553700:CDS | 60.0% |
| !! | GTTTCTCTCGGCTCGGTGCT+CGG | - | chr4_1:50947024-50947043 | Msa0553700:CDS | 60.0% |
| TGGCAGGCTGCCTACACAGC+AGG | - | chr4_1:50946924-50946943 | Msa0553700:CDS | 65.0% | |
| TGGCAGGCTGCCTACACAGC+AGG | - | chr4_1:50946924-50946943 | Msa0553700:CDS | 65.0% | |
| GCGCTGGGCCCTGCAACCTC+CGG | - | chr4_1:50946686-50946705 | Msa0553700:CDS | 75.0% | |
| CGCTGGGCCCTGCAACCTCC+GGG | - | chr4_1:50946687-50946706 | Msa0553700:CDS | 75.0% | |
| GCGCTGGGCCCTGCAACCTC+CGG | - | chr4_1:50946686-50946705 | Msa0553700:CDS | 75.0% | |
| CGCTGGGCCCTGCAACCTCC+GGG | - | chr4_1:50946687-50946706 | Msa0553700:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 50946288 | 50947592 | 50946288 | ID=Msa0553700;Name=Msa0553700 |
| chr4_1 | mRNA | 50946288 | 50947592 | 50946288 | ID=Msa0553700-mRNA-1;Parent=Msa0553700;Name=Msa0553700-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|1|1|0|434 |
| chr4_1 | exon | 50946288 | 50947592 | 50946288 | ID=Msa0553700-mRNA-1:exon:14493;Parent=Msa0553700-mRNA-1 |
| chr4_1 | CDS | 50946288 | 50947592 | 50946288 | ID=Msa0553700-mRNA-1:cds;Parent=Msa0553700-mRNA-1 |
| Gene Sequence |
| Protein sequence |