Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962190 | XP_003620150.1 | 88.920 | 361 | 2 | 1 | 1 | 361 | 1 | 323 | 0.0 | 632 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962190 | sp|Q8LAD2|SUCA2_ARATH | 76.880 | 359 | 40 | 3 | 5 | 361 | 24 | 341 | 0.0 | 539 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042980 | Msa0962190 | 0.818927 | 1.518437e-52 | -8.615850e-47 |
| Msa0054730 | Msa0962190 | 0.881892 | 1.644825e-70 | -8.615850e-47 |
| Msa0078140 | Msa0962190 | 0.801419 | 9.085422e-49 | -8.615850e-47 |
| Msa0090770 | Msa0962190 | 0.801566 | 8.475120e-49 | -8.615850e-47 |
| Msa0094940 | Msa0962190 | 0.842460 | 2.551997e-58 | -8.615850e-47 |
| Msa0106370 | Msa0962190 | 0.861094 | 1.305508e-63 | -8.615850e-47 |
| Msa0605170 | Msa0962190 | -0.803681 | 3.104227e-49 | -8.615850e-47 |
| Msa0607540 | Msa0962190 | -0.805018 | 1.634697e-49 | -8.615850e-47 |
| Msa0607750 | Msa0962190 | 0.804225 | 2.392555e-49 | -8.615850e-47 |
| Msa0640380 | Msa0962190 | -0.839630 | 1.412618e-57 | -8.615850e-47 |
| Msa0647450 | Msa0962190 | 0.808831 | 2.552959e-50 | -8.615850e-47 |
| Msa0661190 | Msa0962190 | 0.842774 | 2.105145e-58 | -8.615850e-47 |
| Msa0678820 | Msa0962190 | -0.829395 | 5.273020e-55 | -8.615850e-47 |
| Msa0695430 | Msa0962190 | -0.800954 | 1.131230e-48 | -8.615850e-47 |
| Msa0704470 | Msa0962190 | 0.813652 | 2.296656e-51 | -8.615850e-47 |
| Msa0722930 | Msa0962190 | -0.800167 | 1.636398e-48 | -8.615850e-47 |
| Msa0723140 | Msa0962190 | -0.802277 | 6.056371e-49 | -8.615850e-47 |
| Msa0777460 | Msa0962190 | 0.818725 | 1.687214e-52 | -8.615850e-47 |
| Msa0825240 | Msa0962190 | 0.805453 | 1.325283e-49 | -8.615850e-47 |
| Msa0128320 | Msa0962190 | 0.811108 | 8.256141e-51 | -8.615850e-47 |
| Msa0136890 | Msa0962190 | 0.825291 | 5.079381e-54 | -8.615850e-47 |
| Msa0153000 | Msa0962190 | 0.806302 | 8.787911e-50 | -8.615850e-47 |
| Msa0178350 | Msa0962190 | -0.808633 | 2.814622e-50 | -8.615850e-47 |
| Msa0185640 | Msa0962190 | 0.823529 | 1.319098e-53 | -8.615850e-47 |
| Msa0226620 | Msa0962190 | 0.851278 | 9.847055e-61 | -8.615850e-47 |
| Msa0231290 | Msa0962190 | 0.844043 | 9.653301e-59 | -8.615850e-47 |
| Msa0373930 | Msa0962190 | -0.843851 | 1.086375e-58 | -8.615850e-47 |
| Msa0409080 | Msa0962190 | -0.806993 | 6.280981e-50 | -8.615850e-47 |
| Msa0465670 | Msa0962190 | 0.807833 | 4.166178e-50 | -8.615850e-47 |
| Msa0482190 | Msa0962190 | 0.808963 | 2.391948e-50 | -8.615850e-47 |
| Msa0260230 | Msa0962190 | 0.813252 | 2.812794e-51 | -8.615850e-47 |
| Msa0260270 | Msa0962190 | 0.865645 | 5.083116e-65 | -8.615850e-47 |
| Msa0260950 | Msa0962190 | 0.841381 | 4.917403e-58 | -8.615850e-47 |
| Msa0304270 | Msa0962190 | 0.811369 | 7.248058e-51 | -8.615850e-47 |
| Msa0306210 | Msa0962190 | 0.801028 | 1.092037e-48 | -8.615850e-47 |
| Msa0323420 | Msa0962190 | 0.829335 | 5.453487e-55 | -8.615850e-47 |
| Msa0342340 | Msa0962190 | 0.813400 | 2.609114e-51 | -8.615850e-47 |
| Msa0485500 | Msa0962190 | 0.805445 | 1.330127e-49 | -8.615850e-47 |
| Msa0494620 | Msa0962190 | 0.843418 | 1.418513e-58 | -8.615850e-47 |
| Msa0502100 | Msa0962190 | -0.802762 | 4.810262e-49 | -8.615850e-47 |
| Msa0531970 | Msa0962190 | 0.809117 | 2.217438e-50 | -8.615850e-47 |
| Msa0532790 | Msa0962190 | 0.862553 | 4.671460e-64 | -8.615850e-47 |
| Msa0540070 | Msa0962190 | -0.825398 | 4.791583e-54 | -8.615850e-47 |
| Msa0543900 | Msa0962190 | -0.843646 | 1.233193e-58 | -8.615850e-47 |
| Msa0553700 | Msa0962190 | 0.806638 | 7.463804e-50 | -8.615850e-47 |
| Msa0564510 | Msa0962190 | -0.828806 | 7.324922e-55 | -8.615850e-47 |
| Msa0585000 | Msa0962190 | 0.829252 | 5.712814e-55 | -8.615850e-47 |
| Msa0599770 | Msa0962190 | -0.849734 | 2.672918e-60 | -8.615850e-47 |
| Msa0876850 | Msa0962190 | 0.819320 | 1.235876e-52 | -8.615850e-47 |
| Msa0923260 | Msa0962190 | 0.912126 | 2.781044e-83 | -8.615850e-47 |
| Msa0929740 | Msa0962190 | -0.811338 | 7.359273e-51 | -8.615850e-47 |
| Msa0942080 | Msa0962190 | 0.841104 | 5.815707e-58 | -8.615850e-47 |
| Msa0962190 | Msa0987560 | 0.832993 | 6.881396e-56 | -8.615850e-47 |
| Msa0962190 | Msa0992490 | 0.808481 | 3.032800e-50 | -8.615850e-47 |
| Msa0962190 | Msa0996830 | 0.882093 | 1.390064e-70 | -8.615850e-47 |
| Msa0962190 | Msa0997450 | 0.814888 | 1.225039e-51 | -8.615850e-47 |
| Msa0962190 | Msa1004810 | -0.818223 | 2.193157e-52 | -8.615850e-47 |
| Msa0962190 | Msa1019840 | 0.841244 | 5.343865e-58 | -8.615850e-47 |
| Msa0962190 | Msa1030880 | 0.822398 | 2.420442e-53 | -8.615850e-47 |
| Msa0962190 | Msa1041730 | -0.802497 | 5.455202e-49 | -8.615850e-47 |
| Msa0962190 | Msa1044420 | -0.808149 | 3.568541e-50 | -8.615850e-47 |
| Msa0962190 | Msa1054410 | -0.828050 | 1.114987e-54 | -8.615850e-47 |
| Msa0962190 | Msa1075080 | 0.823376 | 1.431883e-53 | -8.615850e-47 |
| Msa0962190 | Msa1075220 | 0.821992 | 3.005838e-53 | -8.615850e-47 |
| Msa0962190 | Msa1116130 | 0.819735 | 9.934747e-53 | -8.615850e-47 |
| Msa0962190 | Msa1124540 | 0.809065 | 2.274633e-50 | -8.615850e-47 |
| Msa0962190 | Msa1131350 | 0.803005 | 4.285869e-49 | -8.615850e-47 |
| Msa0962190 | Msa1131940 | 0.805192 | 1.502899e-49 | -8.615850e-47 |
| Msa0962190 | Msa1139000 | 0.807002 | 6.252212e-50 | -8.615850e-47 |
| Msa0962190 | Msa1141250 | 0.805649 | 1.205287e-49 | -8.615850e-47 |
| Msa0962190 | Msa1157930 | 0.819167 | 1.338691e-52 | -8.615850e-47 |
| Msa0962190 | Msa1167220 | -0.808336 | 3.256426e-50 | -8.615850e-47 |
| Msa0962190 | Msa1190710 | 0.838546 | 2.696255e-57 | -8.615850e-47 |
| Msa0962190 | Msa1204980 | 0.820836 | 5.557094e-53 | -8.615850e-47 |
| Msa0962190 | Msa1205010 | 0.818218 | 2.198922e-52 | -8.615850e-47 |
| Msa0962190 | Msa1244720 | 0.813971 | 1.953881e-51 | -8.615850e-47 |
| Msa0962190 | Msa1245170 | 0.811954 | 5.405746e-51 | -8.615850e-47 |
| Msa0962190 | Msa1256540 | 0.818933 | 1.513441e-52 | -8.615850e-47 |
| Msa0962190 | Msa1258380 | 0.809117 | 2.217438e-50 | -8.615850e-47 |
| Msa0962190 | Msa1264540 | 0.844276 | 8.358733e-59 | -8.615850e-47 |
| Msa0962190 | Msa1265340 | 0.834827 | 2.392512e-56 | -8.615850e-47 |
| Msa0962190 | Msa1271300 | -0.802516 | 5.404975e-49 | -8.615850e-47 |
| Msa0962190 | Msa1296880 | -0.855384 | 6.539705e-62 | -8.615850e-47 |
| Msa0962190 | Msa1296960 | 0.824718 | 6.936135e-54 | -8.615850e-47 |
| Msa0962190 | Msa1357530 | -0.844186 | 8.833904e-59 | -8.615850e-47 |
| Msa0962190 | Msa1364330 | 0.834846 | 2.366454e-56 | -8.615850e-47 |
| Msa0962190 | Msa1390390 | 0.841321 | 5.100890e-58 | -8.615850e-47 |
| Msa0962190 | Msa1444060 | 0.810733 | 9.954993e-51 | -8.615850e-47 |
| Msa0962190 | Msa1449250 | 0.839227 | 1.797976e-57 | -8.615850e-47 |
| Msa0962190 | Msa1451620 | 0.818211 | 2.206149e-52 | -8.615850e-47 |
| Msa0962190 | Msa1453780 | 0.829267 | 5.664773e-55 | -8.615850e-47 |
| Msa0962190 | Msa1454910 | 0.867827 | 1.026800e-65 | -8.615850e-47 |
| Msa0962190 | Msa1464940 | -0.804045 | 2.607401e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962190 | MtrunA17_Chr6g0481761 | 88.920 | 361 | 2 | 1 | 1 | 361 | 1 | 323 | 0.0 | 632 |
| Msa0962190 | MtrunA17_Chr2g0294381 | 27.778 | 252 | 132 | 4 | 116 | 356 | 104 | 316 | 3.65e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962190 | AT5G23250.1 | 76.880 | 359 | 40 | 3 | 5 | 361 | 24 | 341 | 0.0 | 539 |
| Msa0962190 | AT5G08300.1 | 77.391 | 345 | 38 | 2 | 19 | 361 | 40 | 346 | 0.0 | 533 |
| Msa0962190 | AT5G23250.2 | 76.997 | 313 | 29 | 3 | 5 | 315 | 24 | 295 | 1.14e-166 | 467 |
| Msa0962190 | AT5G23250.3 | 86.026 | 229 | 27 | 2 | 5 | 231 | 24 | 249 | 1.75e-140 | 399 |
| Msa0962190 | AT3G06650.1 | 26.984 | 252 | 134 | 4 | 116 | 356 | 104 | 316 | 1.41e-15 | 78.6 |
| Msa0962190 | AT3G06650.2 | 26.984 | 252 | 134 | 4 | 116 | 356 | 104 | 316 | 1.41e-15 | 78.6 |
| Msa0962190 | AT5G49460.2 | 27.381 | 252 | 133 | 4 | 116 | 356 | 104 | 316 | 4.08e-15 | 77.0 |
| Msa0962190 | AT5G49460.1 | 27.381 | 252 | 133 | 4 | 116 | 356 | 104 | 316 | 4.08e-15 | 77.0 |
Find 131 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACCCTGTGCCTCCTTTC+TGG | 0.145644 | 6_3:-85089781 | None:intergenic |
| ATTGGAATGTATCGAATTTC+CGG | 0.233070 | 6_3:-85094422 | None:intergenic |
| ACCGAACAAGCGATCGAATA+TGG | 0.237150 | 6_3:+85090036 | Msa0962190:CDS |
| AATTCAGGTATTATTCTTAT+TGG | 0.247983 | 6_3:+85092777 | Msa0962190:intron |
| GTTTGCTGGTAGTGGGGTTA+TGG | 0.251968 | 6_3:+85093174 | Msa0962190:CDS |
| AAAGGTCCCAACTTTAGTTC+TGG | 0.269047 | 6_3:+85093151 | Msa0962190:CDS |
| GATACATGTACTATGATAAT+TGG | 0.276090 | 6_3:+85094600 | Msa0962190:three_prime_UTR |
| AACTTTAGTTCTGGGTTTGC+TGG | 0.277028 | 6_3:+85093160 | Msa0962190:CDS |
| ATTGCAAGTGTGCCTGTTAA+AGG | 0.278946 | 6_3:+85093133 | Msa0962190:intron |
| ATTATTCTTATTGGAGAGAT+AGG | 0.288969 | 6_3:+85092786 | Msa0962190:CDS |
| CAGAAGTGAAAGTGTGATTT+GGG | 0.301303 | 6_3:-85089835 | None:intergenic |
| AAAGGCGGAACGGAACATTT+AGG | 0.302614 | 6_3:+85090090 | Msa0962190:CDS |
| CCTGTTGTTGCATTTATTGC+TGG | 0.315893 | 6_3:+85093465 | Msa0962190:CDS |
| GATCGAATATGGAACGAATA+TGG | 0.316829 | 6_3:+85090047 | Msa0962190:CDS |
| TGGTCCTATCAAACGAGTTT+TGG | 0.319821 | 6_3:-85091852 | None:intergenic |
| AAGCCCGGGGAATGTAAAAT+TGG | 0.326008 | 6_3:+85091893 | Msa0962190:CDS |
| AAGGCGGAACGGAACATTTA+GGG | 0.329459 | 6_3:+85090091 | Msa0962190:CDS |
| TGATTCCCATTGATAGTAAT+GGG | 0.330770 | 6_3:+85094326 | Msa0962190:three_prime_UTR |
| CTTCCATGTAAGACAACTTC+AGG | 0.333347 | 6_3:-85092977 | None:intergenic |
| GTGGAGTCCCCAGCTAAAAT+TGG | 0.338774 | 6_3:+85094189 | Msa0962190:CDS |
| AACGGAACATTTAGGGCTTC+CGG | 0.344291 | 6_3:+85090098 | Msa0962190:CDS |
| CTAAAGTTGGGACCTTTAAC+AGG | 0.347134 | 6_3:-85093145 | None:intergenic |
| TCAGAAGTGAAAGTGTGATT+TGG | 0.350427 | 6_3:-85089836 | None:intergenic |
| AAATATCCCATTACTATCAA+TGG | 0.358936 | 6_3:-85094332 | None:intergenic |
| AGTTCTGGGTTTGCTGGTAG+TGG | 0.360938 | 6_3:+85093166 | Msa0962190:CDS |
| AAGGTCCCAACTTTAGTTCT+GGG | 0.362872 | 6_3:+85093152 | Msa0962190:CDS |
| TCCATATTCGATCGCTTGTT+CGG | 0.380007 | 6_3:-85090037 | None:intergenic |
| TGAGAAGTTGCGGCGGTTGT+TGG | 0.383047 | 6_3:-85089929 | None:intergenic |
| ATTGGAATTGTTTCTCGTTC+TGG | 0.384214 | 6_3:+85091950 | Msa0962190:CDS |
| AAAGATGTACCTTCTGTTTG+AGG | 0.393263 | 6_3:-85092599 | None:intergenic |
| CAAACAACTGCTGTTGGCCT+TGG | 0.397173 | 6_3:+85092494 | Msa0962190:CDS |
| TGAGCTCCAGCTTGTGGCGC+TGG | 0.399183 | 6_3:+85094445 | Msa0962190:three_prime_UTR |
| TGTTCCGTTCCGCCTTTCTT+CGG | 0.405095 | 6_3:-85090084 | None:intergenic |
| GTTCTGGGTTTGCTGGTAGT+GGG | 0.406242 | 6_3:+85093167 | Msa0962190:CDS |
| AACAAAGTTTGTTCCATTGA+AGG | 0.409176 | 6_3:-85092549 | None:intergenic |
| GGACGCTGCTGCTCTAATTA+AGG | 0.414347 | 6_3:+85092824 | Msa0962190:CDS |
| CAATCCAAAACTCGTTTGAT+AGG | 0.420569 | 6_3:+85091848 | Msa0962190:CDS |
| TTGATTCCCATTGATAGTAA+TGG | 0.425140 | 6_3:+85094325 | Msa0962190:three_prime_UTR |
| AAGACAAAATCAGCACCCTT+AGG | 0.428915 | 6_3:+85094148 | Msa0962190:CDS |
| CAAGGCCAACAGCAGTTGTT+TGG | 0.431303 | 6_3:-85092493 | None:intergenic |
| AGGGATTCCTCAGCATGATA+TGG | 0.435715 | 6_3:+85090257 | Msa0962190:CDS |
| ATCAGCACCCTTAGGGAAGC+TGG | 0.437867 | 6_3:+85094156 | Msa0962190:CDS |
| GCCACAAGCTGGAGCTCAAT+TGG | 0.438732 | 6_3:-85094440 | None:intergenic |
| TTGATGATACCAGGGCAGTT+TGG | 0.446440 | 6_3:-85091872 | None:intergenic |
| TCCACATGTGTGGGCATTGG+AGG | 0.447053 | 6_3:+85092521 | Msa0962190:CDS |
| CCGGGTTACATTCACAAACC+TGG | 0.447993 | 6_3:+85091923 | Msa0962190:CDS |
| AGCTATTGTGTCGGGTGGCA+AGG | 0.452187 | 6_3:+85094116 | Msa0962190:intron |
| ACAAAGTTTGTTCCATTGAA+GGG | 0.461996 | 6_3:-85092548 | None:intergenic |
| AGGCTTAGTGCAATAGTTTG+AGG | 0.468890 | 6_3:+85094242 | Msa0962190:exon |
| AATATCCCATTACTATCAAT+GGG | 0.468894 | 6_3:-85094331 | None:intergenic |
| TCAGTCCAGAAAGGAGGCAC+AGG | 0.472249 | 6_3:+85089776 | Msa0962190:five_prime_UTR |
| GTGATCTGTCAAGGAATAAC+CGG | 0.473606 | 6_3:+85089994 | Msa0962190:CDS |
| TGCCCTGGTATCATCAAGCC+CGG | 0.475481 | 6_3:+85091878 | Msa0962190:CDS |
| GAAGTTGCGGCGGTTGTTGG+AGG | 0.479532 | 6_3:-85089926 | None:intergenic |
| ATTCACAAACCTGGGCGCAT+TGG | 0.479565 | 6_3:+85091932 | Msa0962190:CDS |
| CCAGCAATAAATGCAACAAC+AGG | 0.479962 | 6_3:-85093465 | None:intergenic |
| TTCTTGTGCAGCTATTGTGT+CGG | 0.483534 | 6_3:+85094107 | Msa0962190:intron |
| CTTGTTGTTTGTATTACTGA+AGG | 0.486594 | 6_3:+85090237 | Msa0962190:CDS |
| GGAAGCGGTTGAAGCGGAGT+TGG | 0.489889 | 6_3:+85090212 | Msa0962190:CDS |
| TACAAACCAGCGCCACAAGC+TGG | 0.490129 | 6_3:-85094451 | None:intergenic |
| CTGTGACTCCAGCTTCCCTA+AGG | 0.494628 | 6_3:-85094164 | None:intergenic |
| TGCTGCTGCTATTATGGAAG+CGG | 0.495050 | 6_3:+85090197 | Msa0962190:CDS |
| TCTTGTGCAGCTATTGTGTC+GGG | 0.495233 | 6_3:+85094108 | Msa0962190:intron |
| AGCAAACCCAGAACTAAAGT+TGG | 0.496109 | 6_3:-85093158 | None:intergenic |
| TCCCCGGGCTTGATGATACC+AGG | 0.502694 | 6_3:-85091881 | None:intergenic |
| AAAAGTTTGTCTTGTGGGGA+AGG | 0.508177 | 6_3:+85092948 | Msa0962190:intron |
| ATCCCTGAAGTTGTCTTACA+TGG | 0.509990 | 6_3:+85092974 | Msa0962190:CDS |
| CAATCCACATGTGTGGGCAT+TGG | 0.513242 | 6_3:+85092518 | Msa0962190:CDS |
| TGTAAAATTGGAATCATGCC+GGG | 0.516403 | 6_3:+85091905 | Msa0962190:CDS |
| TCCGCAACAGAATTGAAAAC+CGG | 0.517721 | 6_3:-85090117 | None:intergenic |
| GATCTGCTAGGAACTTTGTA+AGG | 0.517985 | 6_3:-85092577 | None:intergenic |
| AGACAAAATCAGCACCCTTA+GGG | 0.519396 | 6_3:+85094149 | Msa0962190:CDS |
| AAAGTTTGTCTTGTGGGGAA+GGG | 0.520481 | 6_3:+85092949 | Msa0962190:intron |
| GGCGGTGTTACTCCGAAGAA+AGG | 0.520851 | 6_3:+85090072 | Msa0962190:CDS |
| TCCTCCAATGCCCACACATG+TGG | 0.524542 | 6_3:-85092522 | None:intergenic |
| ATAATAGCAGCAGCAGCAAA+AGG | 0.524930 | 6_3:-85090189 | None:intergenic |
| TCCAATTGAGCTCCAGCTTG+TGG | 0.528907 | 6_3:+85094439 | Msa0962190:three_prime_UTR |
| TTCTGGGTTTGCTGGTAGTG+GGG | 0.529426 | 6_3:+85093168 | Msa0962190:CDS |
| GCTATTGTGTCGGGTGGCAA+GGG | 0.534414 | 6_3:+85094117 | Msa0962190:intron |
| GCAGCAGCAGCAAAAGGAGG+AGG | 0.535843 | 6_3:-85090183 | None:intergenic |
| TGGGGTTATGGACATGCAAA+AGG | 0.536838 | 6_3:+85093186 | Msa0962190:CDS |
| GCAAACCCAGAACTAAAGTT+GGG | 0.538409 | 6_3:-85093157 | None:intergenic |
| ATGTAAAATTGGAATCATGC+CGG | 0.544331 | 6_3:+85091904 | Msa0962190:CDS |
| TTCCATGTAAGACAACTTCA+GGG | 0.544755 | 6_3:-85092976 | None:intergenic |
| CTGCTTGAAAATATCAAACA+TGG | 0.547001 | 6_3:-85094217 | None:intergenic |
| ATTGGAGGAGACCCCTTCAA+TGG | 0.551942 | 6_3:+85092536 | Msa0962190:CDS |
| TTGTTGTTTGTATTACTGAA+GGG | 0.552535 | 6_3:+85090238 | Msa0962190:CDS |
| CAAAGTTTGTTCCATTGAAG+GGG | 0.558465 | 6_3:-85092547 | None:intergenic |
| TGTGTTTCCGTTGATTGCTA+CGG | 0.558738 | 6_3:+85094578 | Msa0962190:three_prime_UTR |
| GAATGACTATTCAGGAAAGC+GGG | 0.558880 | 6_3:+85093433 | Msa0962190:intron |
| GAAACAATTCCAATGCGCCC+AGG | 0.559949 | 6_3:-85091941 | None:intergenic |
| ACGGAAACACAAACACTGGC+AGG | 0.563800 | 6_3:-85094566 | None:intergenic |
| CGTGTCCCATACGACGGCCA+GGG | 0.564279 | 6_3:-85093500 | None:intergenic |
| ATTCTTATTGGAGAGATAGG+AGG | 0.566079 | 6_3:+85092789 | Msa0962190:CDS |
| AAGGGGTTGTTGAGAAGTTG+CGG | 0.568258 | 6_3:-85089939 | None:intergenic |
| GAATATGGAACGAATATGGT+TGG | 0.570512 | 6_3:+85090051 | Msa0962190:CDS |
| GATAGGAGGAACTGCAGAAG+AGG | 0.574249 | 6_3:+85092803 | Msa0962190:CDS |
| AAAGAATAGTCAGTCCAGAA+AGG | 0.575032 | 6_3:+85089767 | Msa0962190:five_prime_UTR |
| GTTTACCAAACAACTGCTGT+TGG | 0.576485 | 6_3:+85092488 | Msa0962190:CDS |
| AGCACACGCGTGATCTGTCA+AGG | 0.576838 | 6_3:+85089985 | Msa0962190:CDS |
| TTGATAGGACCAAACTGCCC+TGG | 0.579975 | 6_3:+85091863 | Msa0962190:CDS |
| CGGGTTACATTCACAAACCT+GGG | 0.586223 | 6_3:+85091924 | Msa0962190:CDS |
| CCAGGTTTGTGAATGTAACC+CGG | 0.592655 | 6_3:-85091923 | None:intergenic |
| CTGAAGTTGTCTTACATGGA+AGG | 0.594214 | 6_3:+85092978 | Msa0962190:CDS |
| GGAAGCTGGAGTCACAGTTG+TGG | 0.594495 | 6_3:+85094170 | Msa0962190:CDS |
| CAGTCCAGAAAGGAGGCACA+GGG | 0.603456 | 6_3:+85089777 | Msa0962190:five_prime_UTR |
| GGCCGTCGTATGGGACACGC+TGG | 0.604310 | 6_3:+85093504 | Msa0962190:CDS |
| ATCAACGGAAACACAAACAC+TGG | 0.604639 | 6_3:-85094570 | None:intergenic |
| CCACACATGTGGATTGTCCA+AGG | 0.608972 | 6_3:-85092511 | None:intergenic |
| CATGTATCCGTAGCAATCAA+CGG | 0.610168 | 6_3:-85094585 | None:intergenic |
| CTTCTGTTTGAGGATCTGCT+AGG | 0.613418 | 6_3:-85092589 | None:intergenic |
| TGTGACTCCAGCTTCCCTAA+GGG | 0.620490 | 6_3:-85094163 | None:intergenic |
| CTAGCAGATCCTCAAACAGA+AGG | 0.626606 | 6_3:+85092590 | Msa0962190:CDS |
| TGGAACTTTGACATATGAAG+CGG | 0.628520 | 6_3:+85091970 | Msa0962190:CDS |
| TATGGAACGAATATGGTTGG+CGG | 0.631678 | 6_3:+85090054 | Msa0962190:CDS |
| GAATAGTCAGTCCAGAAAGG+AGG | 0.635752 | 6_3:+85089770 | Msa0962190:five_prime_UTR |
| CGTCGTATGGGACACGCTGG+AGG | 0.636732 | 6_3:+85093507 | Msa0962190:CDS |
| TGAATGACTATTCAGGAAAG+CGG | 0.638917 | 6_3:+85093432 | Msa0962190:intron |
| TATTATGGAAGCGGTTGAAG+CGG | 0.641435 | 6_3:+85090206 | Msa0962190:CDS |
| CCCTGGTATCATCAAGCCCG+GGG | 0.644773 | 6_3:+85091880 | Msa0962190:CDS |
| CTTGGACAATCCACATGTGT+GGG | 0.646091 | 6_3:+85092512 | Msa0962190:CDS |
| TACTCCGAAGAAAGGCGGAA+CGG | 0.647259 | 6_3:+85090080 | Msa0962190:CDS |
| TGTGCAGCTATTGTGTCGGG+TGG | 0.647703 | 6_3:+85094111 | Msa0962190:intron |
| CCTTGGACAATCCACATGTG+TGG | 0.655816 | 6_3:+85092511 | Msa0962190:CDS |
| ATAGCTACCATATCATGCTG+AGG | 0.659147 | 6_3:-85090264 | None:intergenic |
| GTGTCCCATACGACGGCCAG+GGG | 0.661520 | 6_3:-85093499 | None:intergenic |
| CCCCGGGCTTGATGATACCA+GGG | 0.670275 | 6_3:-85091880 | None:intergenic |
| ATAGCAGCAGCAGCAAAAGG+AGG | 0.675861 | 6_3:-85090186 | None:intergenic |
| GGTGTTACTCCGAAGAAAGG+CGG | 0.696917 | 6_3:+85090075 | Msa0962190:CDS |
| GGGTTGTTGAGAAGTTGCGG+CGG | 0.716294 | 6_3:-85089936 | None:intergenic |
| TTTGTCGACGAACACCGCGG+GGG | 0.744903 | 6_3:-85089962 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTATTTATAAAGTTTTTAA+CGG | + | chr6_3:85093395-85093414 | Msa0962190:intron | 10.0% |
| !!! | ATTTTAATTTTCTAAAGTTT+TGG | + | chr6_3:85093533-85093552 | Msa0962190:intron | 10.0% |
| !!! | TGATTTTCTCAAATTATTAA+CGG | - | chr6_3:85090592-85090611 | None:intergenic | 15.0% |
| !!! | ATTATAATTGTTATTGTCAT+AGG | + | chr6_3:85090848-85090867 | Msa0962190:intron | 15.0% |
| !!! | ATTATAATTGTTATTGTCAT+AGG | + | chr6_3:85090848-85090867 | Msa0962190:intron | 15.0% |
| !! | GGTATTAATATTTGAAAAAA+CGG | + | chr6_3:85091153-85091172 | Msa0962190:intron | 15.0% |
| !! | TTTATATAGATGAATGAAAA+CGG | - | chr6_3:85092307-85092326 | None:intergenic | 15.0% |
| !! | AATAGTTATAAACAAATAGA+TGG | - | chr6_3:85092465-85092484 | None:intergenic | 15.0% |
| !!! | ATAAATTTTTGTCTTTTACT+TGG | + | chr6_3:85092870-85092889 | Msa0962190:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr6_3:85093664-85093683 | None:intergenic | 15.0% |
| !!! | CTTGAATTAATTTTATTCTA+AGG | - | chr6_3:85094393-85094412 | None:intergenic | 15.0% |
| !!! | ACAATTTTAGAAAATAGAAG+TGG | + | chr6_3:85090495-85090514 | Msa0962190:intron | 20.0% |
| !! | AATGTAAACCAAATATATGT+TGG | + | chr6_3:85091185-85091204 | Msa0962190:intron | 20.0% |
| !!! | TTTAGTTTTGAGTTTAATGA+TGG | + | chr6_3:85091383-85091402 | Msa0962190:intron | 20.0% |
| !!! | TTTATGGCTTTTGATAAAAT+TGG | + | chr6_3:85091647-85091666 | Msa0962190:intron | 20.0% |
| !!! | TTATGGCTTTTGATAAAATT+GGG | + | chr6_3:85091648-85091667 | Msa0962190:intron | 20.0% |
| !!! | AAGTTAAGATTTTTTATGTC+AGG | + | chr6_3:85091799-85091818 | Msa0962190:intron | 20.0% |
| !! | AAAGAACTTCAAATTTCAAA+TGG | - | chr6_3:85092407-85092426 | None:intergenic | 20.0% |
| !! | CTATTTGTTTATAACTATTC+AGG | + | chr6_3:85092466-85092485 | Msa0962190:intron | 20.0% |
| !! | CTAATAAAATAATATAGGTG+AGG | - | chr6_3:85092644-85092663 | None:intergenic | 20.0% |
| !! | AATTCAGGTATTATTCTTAT+TGG | + | chr6_3:85092777-85092796 | Msa0962190:intron | 20.0% |
| !! | TATATTATGAATGACTATTC+AGG | + | chr6_3:85093425-85093444 | Msa0962190:intron | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | + | chr6_3:85093673-85093692 | Msa0962190:intron | 20.0% |
| !! | TATATATTTGACCATGTTTA+CGG | + | chr6_3:85093741-85093760 | Msa0962190:intron | 20.0% |
| !!! | TTAATTTTATCAAGTCACTT+CGG | + | chr6_3:85094270-85094289 | Msa0962190:three_prime_UTR | 20.0% |
| !!! | TTGTTGTTTGTATTACTGAA+GGG | + | chr6_3:85090238-85090257 | Msa0962190:CDS | 25.0% |
| !! | AGTGTAATTGTTGTTGTTAT+AGG | + | chr6_3:85090370-85090389 | Msa0962190:intron | 25.0% |
| ! | TAATTGATCTAGTGAAAGAT+AGG | + | chr6_3:85090404-85090423 | Msa0962190:intron | 25.0% |
| ! | AATTGATCTAGTGAAAGATA+GGG | + | chr6_3:85090405-85090424 | Msa0962190:intron | 25.0% |
| ! | GTGGTAATTATTATCGTTAT+AGG | + | chr6_3:85090514-85090533 | Msa0962190:intron | 25.0% |
| ! | ATAGGTTAATATGTGATGTA+AGG | + | chr6_3:85090866-85090885 | Msa0962190:intron | 25.0% |
| ! | ATAGGTTAATATGTGATGTA+AGG | + | chr6_3:85090866-85090885 | Msa0962190:intron | 25.0% |
| !!! | TATAAAAGACCTGCTTTTTT+TGG | + | chr6_3:85091552-85091571 | Msa0962190:intron | 25.0% |
| !!! | ATAAAAGACCTGCTTTTTTT+GGG | + | chr6_3:85091553-85091572 | Msa0962190:intron | 25.0% |
| ! | TGCTTCTTATATCAATGTAT+CGG | + | chr6_3:85091773-85091792 | Msa0962190:intron | 25.0% |
| !! | TCTTTTCAACATCAAAAACA+AGG | - | chr6_3:85092001-85092020 | None:intergenic | 25.0% |
| !!! | TATGATACAGTTTTGTTACA+TGG | + | chr6_3:85092044-85092063 | Msa0962190:intron | 25.0% |
| ! | AACAACAGTAAATTGAGAAA+GGG | - | chr6_3:85092262-85092281 | None:intergenic | 25.0% |
| ! | TAACAACAGTAAATTGAGAA+AGG | - | chr6_3:85092263-85092282 | None:intergenic | 25.0% |
| ! | ATTTATTCCTGTTGGATTAA+TGG | + | chr6_3:85092722-85092741 | Msa0962190:intron | 25.0% |
| ! | TTTATTCCTGTTGGATTAAT+GGG | + | chr6_3:85092723-85092742 | Msa0962190:intron | 25.0% |
| ! | ATTATTCTTATTGGAGAGAT+AGG | + | chr6_3:85092786-85092805 | Msa0962190:CDS | 25.0% |
| ! | TTTGAAAAAGTTTGTCTTGT+CGG | + | chr6_3:85092910-85092929 | Msa0962190:intron | 25.0% |
| ! | ATTTGAAAAAGTTTGTCTTG+TGG | + | chr6_3:85092909-85092928 | Msa0962190:intron | 25.0% |
| ! | TTTGAAAAAGTTTGTCTTGT+GGG | + | chr6_3:85092910-85092929 | Msa0962190:intron | 25.0% |
| !!! | GAAGGTACTTAAATAGAAAT+TGG | + | chr6_3:85092996-85093015 | Msa0962190:intron | 25.0% |
| !!! | TTCTAAAGTTTTGGAAATGA+TGG | + | chr6_3:85093542-85093561 | Msa0962190:intron | 25.0% |
| !!! | ATTGATCTTGAATTTTAGCA+TGG | + | chr6_3:85093618-85093637 | Msa0962190:intron | 25.0% |
| !!! | TTGATCTTGAATTTTAGCAT+GGG | + | chr6_3:85093619-85093638 | Msa0962190:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr6_3:85093698-85093717 | Msa0962190:intron | 25.0% |
| ! | ATATATTTGACCATGTTTAC+GGG | + | chr6_3:85093742-85093761 | Msa0962190:intron | 25.0% |
| !! | TTTTACAATCAAGGATGATA+TGG | + | chr6_3:85093834-85093853 | Msa0962190:intron | 25.0% |
| ! | TTTACAATCAAGGATGATAT+GGG | + | chr6_3:85093835-85093854 | Msa0962190:intron | 25.0% |
| ! | ATGAATATGTACATGATCTA+GGG | - | chr6_3:85094053-85094072 | None:intergenic | 25.0% |
| ! | AATGAATATGTACATGATCT+AGG | - | chr6_3:85094054-85094073 | None:intergenic | 25.0% |
| !! | ACATATTCATTTTACTTCAG+TGG | + | chr6_3:85094063-85094082 | Msa0962190:intron | 25.0% |
| !!! | TTTGATATTTTCAAGCAGAA+AGG | + | chr6_3:85094222-85094241 | Msa0962190:CDS | 25.0% |
| ! | AATATCCCATTACTATCAAT+GGG | - | chr6_3:85094334-85094353 | None:intergenic | 25.0% |
| ! | AAATATCCCATTACTATCAA+TGG | - | chr6_3:85094335-85094354 | None:intergenic | 25.0% |
| !!! | TTAATTCAAGATGCTTTTTC+CGG | + | chr6_3:85094403-85094422 | Msa0962190:three_prime_UTR | 25.0% |
| ! | GATACATGTACTATGATAAT+TGG | + | chr6_3:85094600-85094619 | Msa0962190:three_prime_UTR | 25.0% |
| !!! | GTGATTTGGGTTTGTTTTTA+GGG | - | chr6_3:85089825-85089844 | None:intergenic | 30.0% |
| !! | TGTGATTTGGGTTTGTTTTT+AGG | - | chr6_3:85089826-85089845 | None:intergenic | 30.0% |
| !! | CTTGTTGTTTGTATTACTGA+AGG | + | chr6_3:85090237-85090256 | Msa0962190:CDS | 30.0% |
| CGTTATAGGTTAATATGTGT+TGG | + | chr6_3:85090528-85090547 | Msa0962190:intron | 30.0% | |
| TCTCAAATTATTAACGGTGT+TGG | - | chr6_3:85090586-85090605 | None:intergenic | 30.0% | |
| TGATTGATCTGGTAAAAGAT+AGG | + | chr6_3:85090699-85090718 | Msa0962190:intron | 30.0% | |
| GATTGATCTGGTAAAAGATA+GGG | + | chr6_3:85090700-85090719 | Msa0962190:intron | 30.0% | |
| TGTAAGGTCTAGTTAAAGAA+AGG | + | chr6_3:85090882-85090901 | Msa0962190:intron | 30.0% | |
| GTAAGGTCTAGTTAAAGAAA+GGG | + | chr6_3:85090883-85090902 | Msa0962190:intron | 30.0% | |
| TCTAGTTAAAGAAAGGGTTT+GGG | + | chr6_3:85090889-85090908 | Msa0962190:intron | 30.0% | |
| TGTAAGGTCTAGTTAAAGAA+AGG | + | chr6_3:85090882-85090901 | Msa0962190:intron | 30.0% | |
| GTAAGGTCTAGTTAAAGAAA+GGG | + | chr6_3:85090883-85090902 | Msa0962190:intron | 30.0% | |
| TCTAGTTAAAGAAAGGGTTT+GGG | + | chr6_3:85090889-85090908 | Msa0962190:intron | 30.0% | |
| TAATACCATTTAAGAGTCAG+TGG | - | chr6_3:85091140-85091159 | None:intergenic | 30.0% | |
| !! | GAGTGTAAAAAAGTTCTAAG+AGG | + | chr6_3:85091433-85091452 | Msa0962190:intron | 30.0% |
| AAAGTCTACACAAATTTGCA+TGG | - | chr6_3:85091511-85091530 | None:intergenic | 30.0% | |
| ATATCAAACCCAAAAAAAGC+AGG | - | chr6_3:85091564-85091583 | None:intergenic | 30.0% | |
| TTTGTCTGTTTGTCTATTAG+TGG | + | chr6_3:85091583-85091602 | Msa0962190:intron | 30.0% | |
| TTGTCTATTAGTGGTAAACT+TGG | + | chr6_3:85091592-85091611 | Msa0962190:intron | 30.0% | |
| AAAAGCCATAAACAAACCAA+AGG | - | chr6_3:85091639-85091658 | None:intergenic | 30.0% | |
| !!! | TTTCCTTGTGTTTTGAGTTT+GGG | + | chr6_3:85091695-85091714 | Msa0962190:intron | 30.0% |
| ATGTAAAATTGGAATCATGC+CGG | + | chr6_3:85091904-85091923 | Msa0962190:CDS | 30.0% | |
| TATGGTATTATTATCTGTCG+TGG | + | chr6_3:85092183-85092202 | Msa0962190:intron | 30.0% | |
| TTATGTTTCAACTCTGCTAT+GGG | - | chr6_3:85092216-85092235 | None:intergenic | 30.0% | |
| ATTATGTTTCAACTCTGCTA+TGG | - | chr6_3:85092217-85092236 | None:intergenic | 30.0% | |
| GGGCAAAAAAATAAGAAAGT+TGG | - | chr6_3:85092242-85092261 | None:intergenic | 30.0% | |
| ! | ACAAAGTTTGTTCCATTGAA+GGG | - | chr6_3:85092551-85092570 | None:intergenic | 30.0% |
| ! | AACAAAGTTTGTTCCATTGA+AGG | - | chr6_3:85092552-85092571 | None:intergenic | 30.0% |
| TCCTAATGATTTATTCCTGT+TGG | + | chr6_3:85092714-85092733 | Msa0962190:intron | 30.0% | |
| TCCAACAGGAATAAATCATT+AGG | - | chr6_3:85092718-85092737 | None:intergenic | 30.0% | |
| ACTGTTTGTTTGTGTAATTC+AGG | + | chr6_3:85092762-85092781 | Msa0962190:intron | 30.0% | |
| TTGAAAAAGTTTGTCTTGTG+GGG | + | chr6_3:85092944-85092963 | Msa0962190:intron | 30.0% | |
| ! | CTTTTCATGAAACAGAGAAA+AGG | + | chr6_3:85093027-85093046 | Msa0962190:intron | 30.0% |
| ATCACAGTTAATGAGCATTA+TGG | - | chr6_3:85093111-85093130 | None:intergenic | 30.0% | |
| ! | CGTAGATGTAAATCTTCTTT+TGG | + | chr6_3:85093231-85093250 | Msa0962190:intron | 30.0% |
| GAGTTAAATTTAAGTCCGTT+AGG | + | chr6_3:85093262-85093281 | Msa0962190:intron | 30.0% | |
| ATGGTGATATTTATTTGTGC+TGG | + | chr6_3:85093301-85093320 | Msa0962190:intron | 30.0% | |
| ! | TATTTTCTGTTCTACACGAA+AGG | + | chr6_3:85093325-85093344 | Msa0962190:intron | 30.0% |
| AAAGAACAAACATATGCTCA+TGG | + | chr6_3:85093348-85093367 | Msa0962190:intron | 30.0% | |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr6_3:85093660-85093679 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr6_3:85093661-85093680 | None:intergenic | 30.0% |
| !!! | TGTATGTGGTTATTTTGACA+CGG | + | chr6_3:85093712-85093731 | Msa0962190:intron | 30.0% |
| !!! | ATGAGCTGTTTTTACAATCA+AGG | + | chr6_3:85093825-85093844 | Msa0962190:intron | 30.0% |
| TTACAATCAAGGATGATATG+GGG | + | chr6_3:85093836-85093855 | Msa0962190:intron | 30.0% | |
| CTCCAAAGAACTAATAGAAA+CGG | - | chr6_3:85093889-85093908 | None:intergenic | 30.0% | |
| ! | GTTTCTATTAGTTCTTTGGA+GGG | + | chr6_3:85093888-85093907 | Msa0962190:intron | 30.0% |
| AATAGCTGCACAAGAAAATA+AGG | - | chr6_3:85094103-85094122 | None:intergenic | 30.0% | |
| CTGCTTGAAAATATCAAACA+TGG | - | chr6_3:85094220-85094239 | None:intergenic | 30.0% | |
| !!! | GTTTTGATTTGACTACAACA+TGG | + | chr6_3:85094292-85094311 | Msa0962190:three_prime_UTR | 30.0% |
| ! | TTGATTCCCATTGATAGTAA+TGG | + | chr6_3:85094325-85094344 | Msa0962190:three_prime_UTR | 30.0% |
| ! | TGATTCCCATTGATAGTAAT+GGG | + | chr6_3:85094326-85094345 | Msa0962190:three_prime_UTR | 30.0% |
| ATTGGAATGTATCGAATTTC+CGG | - | chr6_3:85094425-85094444 | None:intergenic | 30.0% | |
| !!! | TTCAATTTTTAGTGTCTGCA+AGG | + | chr6_3:85094511-85094530 | Msa0962190:three_prime_UTR | 30.0% |
| AAAGAATAGTCAGTCCAGAA+AGG | + | chr6_3:85089767-85089786 | Msa0962190:five_prime_UTR | 35.0% | |
| ! | CAGAAGTGAAAGTGTGATTT+GGG | - | chr6_3:85089838-85089857 | None:intergenic | 35.0% |
| ! | TCAGAAGTGAAAGTGTGATT+TGG | - | chr6_3:85089839-85089858 | None:intergenic | 35.0% |
| !!! | ATGAGAAGAGTTTTGTTACG+CGG | - | chr6_3:85089900-85089919 | None:intergenic | 35.0% |
| GATCGAATATGGAACGAATA+TGG | + | chr6_3:85090047-85090066 | Msa0962190:CDS | 35.0% | |
| GAATATGGAACGAATATGGT+TGG | + | chr6_3:85090051-85090070 | Msa0962190:CDS | 35.0% | |
| ATCTAGTGAAAGATAGGGTT+AGG | + | chr6_3:85090410-85090429 | Msa0962190:intron | 35.0% | |
| TCTAGTGAAAGATAGGGTTA+GGG | + | chr6_3:85090411-85090430 | Msa0962190:intron | 35.0% | |
| !! | TTCATAGGTGTTGATTGATC+TGG | + | chr6_3:85090688-85090707 | Msa0962190:intron | 35.0% |
| ATCTGGTAAAAGATAGGGTT+GGG | + | chr6_3:85090705-85090724 | Msa0962190:intron | 35.0% | |
| ! | CCATTTTCCCAAATTACAAC+CGG | - | chr6_3:85090778-85090797 | None:intergenic | 35.0% |
| GTCTAGTTAAAGAAAGGGTT+TGG | + | chr6_3:85090888-85090907 | Msa0962190:intron | 35.0% | |
| GTCTAGTTAAAGAAAGGGTT+TGG | + | chr6_3:85090888-85090907 | Msa0962190:intron | 35.0% | |
| !! | ATATGCCACTGACTCTTAAA+TGG | + | chr6_3:85091132-85091151 | Msa0962190:intron | 35.0% |
| AGCTGACACCAACATATATT+TGG | - | chr6_3:85091196-85091215 | None:intergenic | 35.0% | |
| TGTCAATGTGTGACATATGT+CGG | - | chr6_3:85091237-85091256 | None:intergenic | 35.0% | |
| !! | AAGTTCTAAGAGGTGAGTTA+TGG | + | chr6_3:85091443-85091462 | Msa0962190:intron | 35.0% |
| !!! | GTTTCCTTGTGTTTTGAGTT+TGG | + | chr6_3:85091694-85091713 | Msa0962190:intron | 35.0% |
| ACTAAATTGCACAATCCATG+AGG | - | chr6_3:85091750-85091769 | None:intergenic | 35.0% | |
| CAATCCAAAACTCGTTTGAT+AGG | + | chr6_3:85091848-85091867 | Msa0962190:CDS | 35.0% | |
| ! | ATTCCAATTTTACATTCCCC+GGG | - | chr6_3:85091899-85091918 | None:intergenic | 35.0% |
| ! | GATTCCAATTTTACATTCCC+CGG | - | chr6_3:85091900-85091919 | None:intergenic | 35.0% |
| TGTAAAATTGGAATCATGCC+GGG | + | chr6_3:85091905-85091924 | Msa0962190:CDS | 35.0% | |
| ! | ATTGGAATTGTTTCTCGTTC+TGG | + | chr6_3:85091950-85091969 | Msa0962190:CDS | 35.0% |
| TGGAACTTTGACATATGAAG+CGG | + | chr6_3:85091970-85091989 | Msa0962190:CDS | 35.0% | |
| ! | ACTGTTGAGTTTGTTCTAGT+AGG | + | chr6_3:85092020-85092039 | Msa0962190:intron | 35.0% |
| ! | CTGTTGAGTTTGTTCTAGTA+GGG | + | chr6_3:85092021-85092040 | Msa0962190:intron | 35.0% |
| TATGTTTCAACTCTGCTATG+GGG | - | chr6_3:85092215-85092234 | None:intergenic | 35.0% | |
| ! | GTTGTCTTTTATTGAGTACC+AGG | + | chr6_3:85092362-85092381 | Msa0962190:intron | 35.0% |
| ! | TTTTGATGCATACAGTACGA+TGG | + | chr6_3:85092424-85092443 | Msa0962190:intron | 35.0% |
| CAAATAGATGGCTTATCCAT+GGG | - | chr6_3:85092453-85092472 | None:intergenic | 35.0% | |
| ACAAATAGATGGCTTATCCA+TGG | - | chr6_3:85092454-85092473 | None:intergenic | 35.0% | |
| ! | CAAAGTTTGTTCCATTGAAG+GGG | - | chr6_3:85092550-85092569 | None:intergenic | 35.0% |
| AAAGATGTACCTTCTGTTTG+AGG | - | chr6_3:85092602-85092621 | None:intergenic | 35.0% | |
| ATTCTTATTGGAGAGATAGG+AGG | + | chr6_3:85092789-85092808 | Msa0962190:CDS | 35.0% | |
| TGCACAGCTAACAATTAAGA+GGG | - | chr6_3:85092851-85092870 | None:intergenic | 35.0% | |
| ATGCACAGCTAACAATTAAG+AGG | - | chr6_3:85092852-85092871 | None:intergenic | 35.0% | |
| TTCCATGTAAGACAACTTCA+GGG | - | chr6_3:85092979-85092998 | None:intergenic | 35.0% | |
| ! | AAATCTTCTTTTGGTGAACG+AGG | + | chr6_3:85093240-85093259 | Msa0962190:intron | 35.0% |
| CACCAGTTAATAACACCTAA+CGG | - | chr6_3:85093280-85093299 | None:intergenic | 35.0% | |
| !! | AGGTGTTATTAACTGGTGAA+TGG | + | chr6_3:85093282-85093301 | Msa0962190:intron | 35.0% |
| TGAATGACTATTCAGGAAAG+CGG | + | chr6_3:85093432-85093451 | Msa0962190:intron | 35.0% | |
| TATTCAAACACCCGTAAACA+TGG | - | chr6_3:85093755-85093774 | None:intergenic | 35.0% | |
| CCTATAAGACAAGTGCTAAT+TGG | - | chr6_3:85093800-85093819 | None:intergenic | 35.0% | |
| CCAATTAGCACTTGTCTTAT+AGG | + | chr6_3:85093797-85093816 | Msa0962190:intron | 35.0% | |
| TACAATCAAGGATGATATGG+GGG | + | chr6_3:85093837-85093856 | Msa0962190:intron | 35.0% | |
| ! | TGCCGTTTCTATTAGTTCTT+TGG | + | chr6_3:85093884-85093903 | Msa0962190:intron | 35.0% |
| ! | CGTTTCTATTAGTTCTTTGG+AGG | + | chr6_3:85093887-85093906 | Msa0962190:intron | 35.0% |
| ! | TGCTTTATTGTCATCACTGA+AGG | - | chr6_3:85094007-85094026 | None:intergenic | 35.0% |
| !!! | ATTTTTAGTGTCTGCAAGGT+TGG | + | chr6_3:85094515-85094534 | Msa0962190:three_prime_UTR | 35.0% |
| GTGATCTGTCAAGGAATAAC+CGG | + | chr6_3:85089994-85090013 | Msa0962190:CDS | 40.0% | |
| CAAGGAATAACCGGCAAAAA+CGG | + | chr6_3:85090003-85090022 | Msa0962190:CDS | 40.0% | |
| TCCATATTCGATCGCTTGTT+CGG | - | chr6_3:85090040-85090059 | None:intergenic | 40.0% | |
| TATGGAACGAATATGGTTGG+CGG | + | chr6_3:85090054-85090073 | Msa0962190:CDS | 40.0% | |
| ! | TCCGGTTTTCAATTCTGTTG+CGG | + | chr6_3:85090116-85090135 | Msa0962190:CDS | 40.0% |
| TCCGCAACAGAATTGAAAAC+CGG | - | chr6_3:85090120-85090139 | None:intergenic | 40.0% | |
| ATAATAGCAGCAGCAGCAAA+AGG | - | chr6_3:85090192-85090211 | None:intergenic | 40.0% | |
| ! | TTTTGCTGCTGCTGCTATTA+TGG | + | chr6_3:85090191-85090210 | Msa0962190:CDS | 40.0% |
| TATTATGGAAGCGGTTGAAG+CGG | + | chr6_3:85090206-85090225 | Msa0962190:CDS | 40.0% | |
| ATAGCTACCATATCATGCTG+AGG | - | chr6_3:85090267-85090286 | None:intergenic | 40.0% | |
| ! | ATGTGTTGGTCTATGAAGCA+CGG | + | chr6_3:85090542-85090561 | Msa0962190:intron | 40.0% |
| GCACAAACACTCTTCAGATT+AGG | - | chr6_3:85090668-85090687 | None:intergenic | 40.0% | |
| !! | GAAGAGTGTTTGTGCTTCAT+AGG | + | chr6_3:85090673-85090692 | Msa0962190:intron | 40.0% |
| GATCTGGTAAAAGATAGGGT+TGG | + | chr6_3:85090704-85090723 | Msa0962190:intron | 40.0% | |
| TCTGGTAAAAGATAGGGTTG+GGG | + | chr6_3:85090706-85090725 | Msa0962190:intron | 40.0% | |
| ! | TGTAGACACCGGTTGTAATT+TGG | + | chr6_3:85090767-85090786 | Msa0962190:intron | 40.0% |
| ! | GTAGACACCGGTTGTAATTT+GGG | + | chr6_3:85090768-85090787 | Msa0962190:intron | 40.0% |
| CCGGTTGTAATTTGGGAAAA+TGG | + | chr6_3:85090775-85090794 | Msa0962190:intron | 40.0% | |
| ACACCTTTGATGTGACATGT+AGG | + | chr6_3:85091256-85091275 | Msa0962190:intron | 40.0% | |
| ! | TAGGTGCTACATGCAAACTA+GGG | + | chr6_3:85091275-85091294 | Msa0962190:intron | 40.0% |
| !! | GTGAGCCTTTGGTTTGTTTA+TGG | + | chr6_3:85091631-85091650 | Msa0962190:intron | 40.0% |
| ATGCCCAAACTCAAAACACA+AGG | - | chr6_3:85091701-85091720 | None:intergenic | 40.0% | |
| ! | TGGTCCTATCAAACGAGTTT+TGG | - | chr6_3:85091855-85091874 | None:intergenic | 40.0% |
| !!! | GGATTTTTTTCAGCCACCAT+AGG | + | chr6_3:85092090-85092109 | Msa0962190:intron | 40.0% |
| CACCATAGGCAATTTGTGAA+GGG | + | chr6_3:85092104-85092123 | Msa0962190:intron | 40.0% | |
| ! | ACAACATTGCGGATTATGGA+AGG | - | chr6_3:85092133-85092152 | None:intergenic | 40.0% |
| ! | AGTCACAACATTGCGGATTA+TGG | - | chr6_3:85092137-85092156 | None:intergenic | 40.0% |
| ATAAGTGCACAAGATTCGCA+GGG | - | chr6_3:85092166-85092185 | None:intergenic | 40.0% | |
| ATGTTTCAACTCTGCTATGG+GGG | - | chr6_3:85092214-85092233 | None:intergenic | 40.0% | |
| ATTGAGTACCAGGCTTATCT+TGG | + | chr6_3:85092372-85092391 | Msa0962190:intron | 40.0% | |
| TTGAGTACCAGGCTTATCTT+GGG | + | chr6_3:85092373-85092392 | Msa0962190:intron | 40.0% | |
| ATTAACTCCCAAGATAAGCC+TGG | - | chr6_3:85092383-85092402 | None:intergenic | 40.0% | |
| GTTTACCAAACAACTGCTGT+TGG | + | chr6_3:85092488-85092507 | Msa0962190:CDS | 40.0% | |
| GATCTGCTAGGAACTTTGTA+AGG | - | chr6_3:85092580-85092599 | None:intergenic | 40.0% | |
| TTCCTGTTGGATTAATGGGA+TGG | + | chr6_3:85092727-85092746 | Msa0962190:intron | 40.0% | |
| AAAAGTTTGTCTTGTGGGGA+AGG | + | chr6_3:85092948-85092967 | Msa0962190:intron | 40.0% | |
| AAAGTTTGTCTTGTGGGGAA+GGG | + | chr6_3:85092949-85092968 | Msa0962190:intron | 40.0% | |
| ATCCCTGAAGTTGTCTTACA+TGG | + | chr6_3:85092974-85092993 | Msa0962190:CDS | 40.0% | |
| CTTCCATGTAAGACAACTTC+AGG | - | chr6_3:85092980-85092999 | None:intergenic | 40.0% | |
| CTGAAGTTGTCTTACATGGA+AGG | + | chr6_3:85092978-85092997 | Msa0962190:CDS | 40.0% | |
| TTTAACAGGCACACTTGCAA+TGG | - | chr6_3:85093134-85093153 | None:intergenic | 40.0% | |
| ATTGCAAGTGTGCCTGTTAA+AGG | + | chr6_3:85093133-85093152 | Msa0962190:intron | 40.0% | |
| CTAAAGTTGGGACCTTTAAC+AGG | - | chr6_3:85093148-85093167 | None:intergenic | 40.0% | |
| ! | AAAGGTCCCAACTTTAGTTC+TGG | + | chr6_3:85093151-85093170 | Msa0962190:CDS | 40.0% |
| !! | AAGGTCCCAACTTTAGTTCT+GGG | + | chr6_3:85093152-85093171 | Msa0962190:CDS | 40.0% |
| GCAAACCCAGAACTAAAGTT+GGG | - | chr6_3:85093160-85093179 | None:intergenic | 40.0% | |
| AGCAAACCCAGAACTAAAGT+TGG | - | chr6_3:85093161-85093180 | None:intergenic | 40.0% | |
| !! | AACTTTAGTTCTGGGTTTGC+TGG | + | chr6_3:85093160-85093179 | Msa0962190:CDS | 40.0% |
| !! | GTCCGTTAGGTGTTATTAAC+TGG | + | chr6_3:85093275-85093294 | Msa0962190:intron | 40.0% |
| GAATGACTATTCAGGAAAGC+GGG | + | chr6_3:85093433-85093452 | Msa0962190:intron | 40.0% | |
| CCAGCAATAAATGCAACAAC+AGG | - | chr6_3:85093468-85093487 | None:intergenic | 40.0% | |
| CCTGTTGTTGCATTTATTGC+TGG | + | chr6_3:85093465-85093484 | Msa0962190:CDS | 40.0% | |
| !!! | ATGTGGTTATTTTGACACGG+AGG | + | chr6_3:85093715-85093734 | Msa0962190:intron | 40.0% |
| !!! | TGTGGTTATTTTGACACGGA+GGG | + | chr6_3:85093716-85093735 | Msa0962190:intron | 40.0% |
| TGGAGGGTGAGAACAATTTA+TGG | + | chr6_3:85093904-85093923 | Msa0962190:intron | 40.0% | |
| GGAGGGTGAGAACAATTTAT+GGG | + | chr6_3:85093905-85093924 | Msa0962190:intron | 40.0% | |
| TTCTTGTGCAGCTATTGTGT+CGG | + | chr6_3:85094107-85094126 | Msa0962190:intron | 40.0% | |
| AAGACAAAATCAGCACCCTT+AGG | + | chr6_3:85094148-85094167 | Msa0962190:CDS | 40.0% | |
| AGACAAAATCAGCACCCTTA+GGG | + | chr6_3:85094149-85094168 | Msa0962190:CDS | 40.0% | |
| AGGCTTAGTGCAATAGTTTG+AGG | + | chr6_3:85094242-85094261 | Msa0962190:exon | 40.0% | |
| CTGGCAGGACAAAAATATGT+AGG | - | chr6_3:85094554-85094573 | None:intergenic | 40.0% | |
| ATCAACGGAAACACAAACAC+TGG | - | chr6_3:85094573-85094592 | None:intergenic | 40.0% | |
| ! | TGTGTTTCCGTTGATTGCTA+CGG | + | chr6_3:85094578-85094597 | Msa0962190:three_prime_UTR | 40.0% |
| CATGTATCCGTAGCAATCAA+CGG | - | chr6_3:85094588-85094607 | None:intergenic | 40.0% | |
| GAATAGTCAGTCCAGAAAGG+AGG | + | chr6_3:85089770-85089789 | Msa0962190:five_prime_UTR | 45.0% | |
| !!! | AGAAGAGTTTTGTTACGCGG+TGG | - | chr6_3:85089897-85089916 | None:intergenic | 45.0% |
| AAGGGGTTGTTGAGAAGTTG+CGG | - | chr6_3:85089942-85089961 | None:intergenic | 45.0% | |
| !! | GTGAAACGTTCCGTTTTTGC+CGG | - | chr6_3:85090016-85090035 | None:intergenic | 45.0% |
| ACCGAACAAGCGATCGAATA+TGG | + | chr6_3:85090036-85090055 | Msa0962190:CDS | 45.0% | |
| AAAGGCGGAACGGAACATTT+AGG | + | chr6_3:85090090-85090109 | Msa0962190:CDS | 45.0% | |
| AAGGCGGAACGGAACATTTA+GGG | + | chr6_3:85090091-85090110 | Msa0962190:CDS | 45.0% | |
| ! | AACGGAACATTTAGGGCTTC+CGG | + | chr6_3:85090098-85090117 | Msa0962190:CDS | 45.0% |
| TGCTGCTGCTATTATGGAAG+CGG | + | chr6_3:85090197-85090216 | Msa0962190:CDS | 45.0% | |
| AGGGATTCCTCAGCATGATA+TGG | + | chr6_3:85090257-85090276 | Msa0962190:CDS | 45.0% | |
| ! | TGTGTTGGTCTATGAAGCAC+GGG | + | chr6_3:85090543-85090562 | Msa0962190:intron | 45.0% |
| GATTAGGCATGAACACGTGT+CGG | - | chr6_3:85090652-85090671 | None:intergenic | 45.0% | |
| CACGTGACACTTGATATGCA+TGG | + | chr6_3:85090947-85090966 | Msa0962190:intron | 45.0% | |
| GCACCTACATGTCACATCAA+AGG | - | chr6_3:85091262-85091281 | None:intergenic | 45.0% | |
| ! | GTAGGTGCTACATGCAAACT+AGG | + | chr6_3:85091274-85091293 | Msa0962190:intron | 45.0% |
| ATTGCTCATGTGTGAGCCTT+TGG | + | chr6_3:85091620-85091639 | Msa0962190:intron | 45.0% | |
| ! | TTGATGATACCAGGGCAGTT+TGG | - | chr6_3:85091875-85091894 | None:intergenic | 45.0% |
| AAGCCCGGGGAATGTAAAAT+TGG | + | chr6_3:85091893-85091912 | Msa0962190:CDS | 45.0% | |
| CCAGGTTTGTGAATGTAACC+CGG | - | chr6_3:85091926-85091945 | None:intergenic | 45.0% | |
| CGGGTTACATTCACAAACCT+GGG | + | chr6_3:85091924-85091943 | Msa0962190:CDS | 45.0% | |
| TCCAACACAACATTCTGTCG+TGG | - | chr6_3:85092073-85092092 | None:intergenic | 45.0% | |
| CCTTCACAAATTGCCTATGG+TGG | - | chr6_3:85092106-85092125 | None:intergenic | 45.0% | |
| CCACCATAGGCAATTTGTGA+AGG | + | chr6_3:85092103-85092122 | Msa0962190:intron | 45.0% | |
| CTCCCTTCACAAATTGCCTA+TGG | - | chr6_3:85092109-85092128 | None:intergenic | 45.0% | |
| CATAGGCAATTTGTGAAGGG+AGG | + | chr6_3:85092107-85092126 | Msa0962190:intron | 45.0% | |
| GATGTGCAGTCACAACATTG+CGG | - | chr6_3:85092144-85092163 | None:intergenic | 45.0% | |
| CATAAGTGCACAAGATTCGC+AGG | - | chr6_3:85092167-85092186 | None:intergenic | 45.0% | |
| CTGCGAATCTTGTGCACTTA+TGG | + | chr6_3:85092165-85092184 | Msa0962190:intron | 45.0% | |
| TACAGTACGATGGTTTCCCA+TGG | + | chr6_3:85092434-85092453 | Msa0962190:intron | 45.0% | |
| CTTGGACAATCCACATGTGT+GGG | + | chr6_3:85092512-85092531 | Msa0962190:CDS | 45.0% | |
| CTTCTGTTTGAGGATCTGCT+AGG | - | chr6_3:85092592-85092611 | None:intergenic | 45.0% | |
| CTAGCAGATCCTCAAACAGA+AGG | + | chr6_3:85092590-85092609 | Msa0962190:CDS | 45.0% | |
| GACCATCCCATTAATCCAAC+AGG | - | chr6_3:85092732-85092751 | None:intergenic | 45.0% | |
| TGGGGTTATGGACATGCAAA+AGG | + | chr6_3:85093186-85093205 | Msa0962190:CDS | 45.0% | |
| TCTTGTGCAGCTATTGTGTC+GGG | + | chr6_3:85094108-85094127 | Msa0962190:intron | 45.0% | |
| !!! | TGGCAGCTCCAATTTTAGCT+GGG | - | chr6_3:85094200-85094219 | None:intergenic | 45.0% |
| !! | ATGGCAGCTCCAATTTTAGC+TGG | - | chr6_3:85094201-85094220 | None:intergenic | 45.0% |
| !! | ATAAACTAATAAAATAATAT+AGG | - | chr6_3:85092649-85092668 | None:intergenic | 5.0% |
| !! | GGTGTTACTCCGAAGAAAGG+CGG | + | chr6_3:85090075-85090094 | Msa0962190:CDS | 50.0% |
| TACTCCGAAGAAAGGCGGAA+CGG | + | chr6_3:85090080-85090099 | Msa0962190:CDS | 50.0% | |
| TGTTCCGTTCCGCCTTTCTT+CGG | - | chr6_3:85090087-85090106 | None:intergenic | 50.0% | |
| ATAGCAGCAGCAGCAAAAGG+AGG | - | chr6_3:85090189-85090208 | None:intergenic | 50.0% | |
| GCACATACACGTGTAGACAC+CGG | + | chr6_3:85090756-85090775 | Msa0962190:intron | 50.0% | |
| GTGCTACATGCAAACTAGGG+TGG | + | chr6_3:85091278-85091297 | Msa0962190:intron | 50.0% | |
| AACACTAGCCAGTTGCCTCA+TGG | + | chr6_3:85091732-85091751 | Msa0962190:intron | 50.0% | |
| TGCACAATCCATGAGGCAAC+TGG | - | chr6_3:85091743-85091762 | None:intergenic | 50.0% | |
| TTGATAGGACCAAACTGCCC+TGG | + | chr6_3:85091863-85091882 | Msa0962190:CDS | 50.0% | |
| CCGGGTTACATTCACAAACC+TGG | + | chr6_3:85091923-85091942 | Msa0962190:CDS | 50.0% | |
| ATTCACAAACCTGGGCGCAT+TGG | + | chr6_3:85091932-85091951 | Msa0962190:CDS | 50.0% | |
| GAAACAATTCCAATGCGCCC+AGG | - | chr6_3:85091944-85091963 | None:intergenic | 50.0% | |
| GCCACGACAGAATGTTGTGT+TGG | + | chr6_3:85092069-85092088 | Msa0962190:intron | 50.0% | |
| CAAGGCCAACAGCAGTTGTT+TGG | - | chr6_3:85092496-85092515 | None:intergenic | 50.0% | |
| ! | CAAACAACTGCTGTTGGCCT+TGG | + | chr6_3:85092494-85092513 | Msa0962190:CDS | 50.0% |
| ! | CCACACATGTGGATTGTCCA+AGG | - | chr6_3:85092514-85092533 | None:intergenic | 50.0% |
| CCTTGGACAATCCACATGTG+TGG | + | chr6_3:85092511-85092530 | Msa0962190:CDS | 50.0% | |
| CAATCCACATGTGTGGGCAT+TGG | + | chr6_3:85092518-85092537 | Msa0962190:CDS | 50.0% | |
| ATTGGAGGAGACCCCTTCAA+TGG | + | chr6_3:85092536-85092555 | Msa0962190:CDS | 50.0% | |
| GATAGGAGGAACTGCAGAAG+AGG | + | chr6_3:85092803-85092822 | Msa0962190:CDS | 50.0% | |
| GGACGCTGCTGCTCTAATTA+AGG | + | chr6_3:85092824-85092843 | Msa0962190:CDS | 50.0% | |
| !! | AGTTCTGGGTTTGCTGGTAG+TGG | + | chr6_3:85093166-85093185 | Msa0962190:CDS | 50.0% |
| !! | GTTCTGGGTTTGCTGGTAGT+GGG | + | chr6_3:85093167-85093186 | Msa0962190:CDS | 50.0% |
| !! | TTCTGGGTTTGCTGGTAGTG+GGG | + | chr6_3:85093168-85093187 | Msa0962190:CDS | 50.0% |
| !! | GTTTGCTGGTAGTGGGGTTA+TGG | + | chr6_3:85093174-85093193 | Msa0962190:CDS | 50.0% |
| TGTGACTCCAGCTTCCCTAA+GGG | - | chr6_3:85094166-85094185 | None:intergenic | 50.0% | |
| GTGGAGTCCCCAGCTAAAAT+TGG | + | chr6_3:85094189-85094208 | Msa0962190:CDS | 50.0% | |
| !!! | GGCAGCTCCAATTTTAGCTG+GGG | - | chr6_3:85094199-85094218 | None:intergenic | 50.0% |
| TCCAATTGAGCTCCAGCTTG+TGG | + | chr6_3:85094439-85094458 | Msa0962190:three_prime_UTR | 50.0% | |
| ACGGAAACACAAACACTGGC+AGG | - | chr6_3:85094569-85094588 | None:intergenic | 50.0% | |
| ! | TCAGTCCAGAAAGGAGGCAC+AGG | + | chr6_3:85089776-85089795 | Msa0962190:five_prime_UTR | 55.0% |
| ! | CAGTCCAGAAAGGAGGCACA+GGG | + | chr6_3:85089777-85089796 | Msa0962190:five_prime_UTR | 55.0% |
| GAAACCCTGTGCCTCCTTTC+TGG | - | chr6_3:85089784-85089803 | None:intergenic | 55.0% | |
| TGAGAAGTTGCGGCGGTTGT+TGG | - | chr6_3:85089932-85089951 | None:intergenic | 55.0% | |
| GGGTTGTTGAGAAGTTGCGG+CGG | - | chr6_3:85089939-85089958 | None:intergenic | 55.0% | |
| ! | TTTTGTCGACGAACACCGCG+GGG | - | chr6_3:85089966-85089985 | None:intergenic | 55.0% |
| ! | CTTTTGTCGACGAACACCGC+GGG | - | chr6_3:85089967-85089986 | None:intergenic | 55.0% |
| ! | GCTTTTGTCGACGAACACCG+CGG | - | chr6_3:85089968-85089987 | None:intergenic | 55.0% |
| AGCACACGCGTGATCTGTCA+AGG | + | chr6_3:85089985-85090004 | Msa0962190:CDS | 55.0% | |
| !! | GGCGGTGTTACTCCGAAGAA+AGG | + | chr6_3:85090072-85090091 | Msa0962190:CDS | 55.0% |
| TAGGGTTGGGGTGACTACGA+TGG | + | chr6_3:85090718-85090737 | Msa0962190:intron | 55.0% | |
| TGCCCTGGTATCATCAAGCC+CGG | + | chr6_3:85091878-85091897 | Msa0962190:CDS | 55.0% | |
| !! | TCCACATGTGTGGGCATTGG+AGG | + | chr6_3:85092521-85092540 | Msa0962190:CDS | 55.0% |
| TCCTCCAATGCCCACACATG+TGG | - | chr6_3:85092525-85092544 | None:intergenic | 55.0% | |
| TGTGCAGCTATTGTGTCGGG+TGG | + | chr6_3:85094111-85094130 | Msa0962190:intron | 55.0% | |
| AGCTATTGTGTCGGGTGGCA+AGG | + | chr6_3:85094116-85094135 | Msa0962190:intron | 55.0% | |
| GCTATTGTGTCGGGTGGCAA+GGG | + | chr6_3:85094117-85094136 | Msa0962190:intron | 55.0% | |
| ATCAGCACCCTTAGGGAAGC+TGG | + | chr6_3:85094156-85094175 | Msa0962190:CDS | 55.0% | |
| CTGTGACTCCAGCTTCCCTA+AGG | - | chr6_3:85094167-85094186 | None:intergenic | 55.0% | |
| GGAAGCTGGAGTCACAGTTG+TGG | + | chr6_3:85094170-85094189 | Msa0962190:CDS | 55.0% | |
| GCCACAAGCTGGAGCTCAAT+TGG | - | chr6_3:85094443-85094462 | None:intergenic | 55.0% | |
| TACAAACCAGCGCCACAAGC+TGG | - | chr6_3:85094454-85094473 | None:intergenic | 55.0% | |
| GAAGTTGCGGCGGTTGTTGG+AGG | - | chr6_3:85089929-85089948 | None:intergenic | 60.0% | |
| TTTGTCGACGAACACCGCGG+GGG | - | chr6_3:85089965-85089984 | None:intergenic | 60.0% | |
| GCAGCAGCAGCAAAAGGAGG+AGG | - | chr6_3:85090186-85090205 | None:intergenic | 60.0% | |
| GGAAGCGGTTGAAGCGGAGT+TGG | + | chr6_3:85090212-85090231 | Msa0962190:CDS | 60.0% | |
| GCCCTGGTATCATCAAGCCC+GGG | + | chr6_3:85091879-85091898 | Msa0962190:CDS | 60.0% | |
| ! | CCCCGGGCTTGATGATACCA+GGG | - | chr6_3:85091883-85091902 | None:intergenic | 60.0% |
| CCCTGGTATCATCAAGCCCG+GGG | + | chr6_3:85091880-85091899 | Msa0962190:CDS | 60.0% | |
| ! | TCCCCGGGCTTGATGATACC+AGG | - | chr6_3:85091884-85091903 | None:intergenic | 60.0% |
| GCTGGATTAACTGCTCCCCC+TGG | + | chr6_3:85093483-85093502 | Msa0962190:CDS | 60.0% | |
| CTCCAGCGTGTCCCATACGA+CGG | - | chr6_3:85093509-85093528 | None:intergenic | 60.0% | |
| CTCAACAACCCCTTCCCCCG+CGG | + | chr6_3:85089948-85089967 | Msa0962190:CDS | 65.0% | |
| TGTCCCATACGACGGCCAGG+GGG | - | chr6_3:85093501-85093520 | None:intergenic | 65.0% | |
| GTGTCCCATACGACGGCCAG+GGG | - | chr6_3:85093502-85093521 | None:intergenic | 65.0% | |
| CGTGTCCCATACGACGGCCA+GGG | - | chr6_3:85093503-85093522 | None:intergenic | 65.0% | |
| CGTCGTATGGGACACGCTGG+AGG | + | chr6_3:85093507-85093526 | Msa0962190:CDS | 65.0% | |
| TGAGCTCCAGCTTGTGGCGC+TGG | + | chr6_3:85094445-85094464 | Msa0962190:three_prime_UTR | 65.0% | |
| GACGAACACCGCGGGGGAAG+GGG | - | chr6_3:85089959-85089978 | None:intergenic | 70.0% | |
| CGACGAACACCGCGGGGGAA+GGG | - | chr6_3:85089960-85089979 | None:intergenic | 70.0% | |
| TCGACGAACACCGCGGGGGA+AGG | - | chr6_3:85089961-85089980 | None:intergenic | 70.0% | |
| TGCTCCCCCTGGCCGTCGTA+TGG | + | chr6_3:85093494-85093513 | Msa0962190:CDS | 70.0% | |
| GCTCCCCCTGGCCGTCGTAT+GGG | + | chr6_3:85093495-85093514 | Msa0962190:CDS | 70.0% | |
| GCGTGTCCCATACGACGGCC+AGG | - | chr6_3:85093504-85093523 | None:intergenic | 70.0% | |
| GGCCGTCGTATGGGACACGC+TGG | + | chr6_3:85093504-85093523 | Msa0962190:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 85089763 | 85094633 | 85089763 | ID=Msa0962190;Name=Msa0962190 |
| chr6_3 | mRNA | 85089763 | 85094633 | 85089763 | ID=Msa0962190-mRNA-1;Parent=Msa0962190;Name=Msa0962190-mRNA-1;_AED=0.06;_eAED=0.06;_QI=123|0.57|0.75|0.75|1|1|8|376|361 |
| chr6_3 | exon | 85089763 | 85090278 | 85089763 | ID=Msa0962190-mRNA-1:exon:15291;Parent=Msa0962190-mRNA-1 |
| chr6_3 | exon | 85091821 | 85091991 | 85091821 | ID=Msa0962190-mRNA-1:exon:15292;Parent=Msa0962190-mRNA-1 |
| chr6_3 | exon | 85092488 | 85092611 | 85092488 | ID=Msa0962190-mRNA-1:exon:15293;Parent=Msa0962190-mRNA-1 |
| chr6_3 | exon | 85092784 | 85092845 | 85092784 | ID=Msa0962190-mRNA-1:exon:15294;Parent=Msa0962190-mRNA-1 |
| chr6_3 | exon | 85092953 | 85092999 | 85092953 | ID=Msa0962190-mRNA-1:exon:15295;Parent=Msa0962190-mRNA-1 |
| chr6_3 | exon | 85093141 | 85093207 | 85093141 | ID=Msa0962190-mRNA-1:exon:15296;Parent=Msa0962190-mRNA-1 |
| chr6_3 | exon | 85093447 | 85093528 | 85093447 | ID=Msa0962190-mRNA-1:exon:15297;Parent=Msa0962190-mRNA-1 |
| chr6_3 | exon | 85094118 | 85094633 | 85094118 | ID=Msa0962190-mRNA-1:exon:15298;Parent=Msa0962190-mRNA-1 |
| chr6_3 | five_prime_UTR | 85089763 | 85089885 | 85089763 | ID=Msa0962190-mRNA-1:five_prime_utr;Parent=Msa0962190-mRNA-1 |
| chr6_3 | CDS | 85089886 | 85090278 | 85089886 | ID=Msa0962190-mRNA-1:cds;Parent=Msa0962190-mRNA-1 |
| chr6_3 | CDS | 85091821 | 85091991 | 85091821 | ID=Msa0962190-mRNA-1:cds;Parent=Msa0962190-mRNA-1 |
| chr6_3 | CDS | 85092488 | 85092611 | 85092488 | ID=Msa0962190-mRNA-1:cds;Parent=Msa0962190-mRNA-1 |
| chr6_3 | CDS | 85092784 | 85092845 | 85092784 | ID=Msa0962190-mRNA-1:cds;Parent=Msa0962190-mRNA-1 |
| chr6_3 | CDS | 85092953 | 85092999 | 85092953 | ID=Msa0962190-mRNA-1:cds;Parent=Msa0962190-mRNA-1 |
| chr6_3 | CDS | 85093141 | 85093207 | 85093141 | ID=Msa0962190-mRNA-1:cds;Parent=Msa0962190-mRNA-1 |
| chr6_3 | CDS | 85093447 | 85093528 | 85093447 | ID=Msa0962190-mRNA-1:cds;Parent=Msa0962190-mRNA-1 |
| chr6_3 | CDS | 85094118 | 85094257 | 85094118 | ID=Msa0962190-mRNA-1:cds;Parent=Msa0962190-mRNA-1 |
| chr6_3 | three_prime_UTR | 85094258 | 85094633 | 85094258 | ID=Msa0962190-mRNA-1:three_prime_utr;Parent=Msa0962190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
