Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559830 | XP_024636490.1 | 72.576 | 361 | 39 | 4 | 1 | 301 | 1 | 361 | 4.82e-170 | 492 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559830 | sp|Q9SV82|FBD40_ARATH | 26.290 | 407 | 205 | 16 | 18 | 359 | 2 | 378 | 1.10e-13 | 75.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559830 | A0A396IEG6 | 66.923 | 390 | 33 | 5 | 1 | 294 | 1 | 390 | 1.15e-162 | 472 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0142220 | Msa0559830 | 0.800461 | 1.425556e-48 | -8.615850e-47 |
| Msa0537500 | Msa0559830 | 0.812656 | 3.797967e-51 | -8.615850e-47 |
| Msa0559830 | Msa0613960 | 0.881119 | 3.127450e-70 | -8.615850e-47 |
| Msa0559830 | Msa0697120 | 0.828391 | 9.227434e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559830 | MtrunA17_Chr4g0049751 | 66.923 | 390 | 33 | 5 | 1 | 294 | 1 | 390 | 2.21e-166 | 472 |
| Msa0559830 | MtrunA17_Chr4g0027431 | 50.547 | 457 | 144 | 8 | 10 | 404 | 1 | 437 | 5.26e-127 | 374 |
| Msa0559830 | MtrunA17_Chr4g0027441 | 47.702 | 457 | 157 | 8 | 10 | 404 | 1 | 437 | 2.47e-115 | 344 |
| Msa0559830 | MtrunA17_Chr4g0027411 | 45.892 | 499 | 146 | 10 | 10 | 404 | 1 | 479 | 7.92e-115 | 344 |
| Msa0559830 | MtrunA17_Chr4g0027231 | 52.835 | 388 | 129 | 7 | 51 | 404 | 197 | 564 | 1.32e-105 | 323 |
| Msa0559830 | MtrunA17_Chr4g0027471 | 56.748 | 326 | 105 | 6 | 55 | 345 | 113 | 437 | 3.25e-101 | 307 |
| Msa0559830 | MtrunA17_Chr4g0027421 | 54.114 | 316 | 100 | 6 | 55 | 360 | 48 | 328 | 3.59e-93 | 283 |
| Msa0559830 | MtrunA17_Chr1g0197661 | 45.876 | 388 | 111 | 12 | 1 | 294 | 1 | 383 | 8.20e-78 | 246 |
| Msa0559830 | MtrunA17_Chr1g0164901 | 46.459 | 353 | 120 | 9 | 10 | 294 | 1 | 352 | 6.45e-74 | 235 |
| Msa0559830 | MtrunA17_Chr4g0027461 | 41.945 | 329 | 98 | 8 | 10 | 246 | 1 | 328 | 2.25e-55 | 186 |
| Msa0559830 | MtrunA17_Chr7g0270951 | 50.847 | 177 | 74 | 4 | 130 | 294 | 7 | 182 | 1.98e-39 | 140 |
| Msa0559830 | MtrunA17_Chr4g0027451 | 56.693 | 127 | 36 | 1 | 278 | 404 | 1 | 108 | 6.95e-38 | 132 |
| Msa0559830 | MtrunA17_Chr1g0197671 | 50.307 | 163 | 48 | 4 | 2 | 131 | 3 | 165 | 1.28e-36 | 132 |
| Msa0559830 | MtrunA17_Chr3g0138371 | 27.820 | 399 | 207 | 16 | 15 | 373 | 17 | 374 | 1.78e-18 | 86.7 |
| Msa0559830 | MtrunA17_Chr8g0358771 | 31.722 | 331 | 172 | 15 | 82 | 377 | 23 | 334 | 3.51e-18 | 85.1 |
| Msa0559830 | MtrunA17_Chr8g0360061 | 26.889 | 450 | 227 | 18 | 2 | 359 | 3 | 442 | 5.57e-16 | 79.7 |
| Msa0559830 | MtrunA17_Chr8g0362491 | 27.400 | 427 | 226 | 17 | 18 | 370 | 25 | 441 | 3.77e-15 | 77.0 |
| Msa0559830 | MtrunA17_Chr5g0438191 | 26.241 | 423 | 222 | 17 | 14 | 371 | 9 | 406 | 3.95e-15 | 76.6 |
| Msa0559830 | MtrunA17_Chr5g0431681 | 25.722 | 381 | 190 | 16 | 18 | 361 | 8 | 332 | 3.56e-14 | 73.6 |
| Msa0559830 | MtrunA17_Chr7g0227851 | 23.869 | 398 | 192 | 13 | 18 | 359 | 11 | 353 | 2.44e-13 | 70.9 |
| Msa0559830 | MtrunA17_Chr5g0419431 | 22.872 | 376 | 219 | 12 | 21 | 359 | 17 | 358 | 2.54e-13 | 70.9 |
| Msa0559830 | MtrunA17_Chr3g0132631 | 25.130 | 386 | 209 | 17 | 18 | 367 | 12 | 353 | 8.05e-13 | 69.3 |
| Msa0559830 | MtrunA17_Chr7g0227651 | 25.189 | 397 | 186 | 14 | 18 | 359 | 11 | 351 | 1.47e-12 | 68.6 |
| Msa0559830 | MtrunA17_Chr7g0236211 | 24.010 | 404 | 218 | 18 | 18 | 373 | 12 | 374 | 4.46e-11 | 63.9 |
| Msa0559830 | MtrunA17_Chr6g0471031 | 24.812 | 399 | 197 | 15 | 18 | 359 | 61 | 413 | 5.51e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559830 | AT4G10400.2 | 26.290 | 407 | 205 | 16 | 18 | 359 | 2 | 378 | 1.12e-14 | 75.9 |
| Msa0559830 | AT4G10400.3 | 26.290 | 407 | 205 | 16 | 18 | 359 | 2 | 378 | 1.12e-14 | 75.9 |
| Msa0559830 | AT4G10400.1 | 26.290 | 407 | 205 | 16 | 18 | 359 | 2 | 378 | 1.12e-14 | 75.9 |
| Msa0559830 | AT4G26350.1 | 23.445 | 418 | 232 | 15 | 18 | 365 | 2 | 401 | 3.89e-14 | 74.3 |
| Msa0559830 | AT2G26860.1 | 28.293 | 410 | 211 | 20 | 18 | 359 | 2 | 396 | 3.77e-13 | 70.9 |
| Msa0559830 | AT2G26860.2 | 28.293 | 410 | 211 | 20 | 18 | 359 | 2 | 396 | 3.77e-13 | 70.9 |
| Msa0559830 | AT3G59200.1 | 25.261 | 479 | 237 | 18 | 18 | 392 | 7 | 468 | 6.28e-13 | 70.9 |
| Msa0559830 | AT5G56370.1 | 25.000 | 400 | 236 | 13 | 18 | 367 | 2 | 387 | 1.27e-12 | 69.3 |
| Msa0559830 | AT5G56370.2 | 25.000 | 400 | 236 | 13 | 18 | 367 | 2 | 387 | 1.27e-12 | 69.3 |
| Msa0559830 | AT5G56380.2 | 25.114 | 438 | 233 | 16 | 18 | 377 | 2 | 422 | 3.80e-12 | 68.2 |
| Msa0559830 | AT5G56380.1 | 25.114 | 438 | 233 | 16 | 18 | 377 | 2 | 422 | 3.80e-12 | 68.2 |
| Msa0559830 | AT3G50710.1 | 25.248 | 404 | 220 | 15 | 18 | 355 | 2 | 389 | 1.21e-11 | 66.6 |
| Msa0559830 | AT3G52680.1 | 24.700 | 417 | 237 | 15 | 1 | 357 | 6 | 405 | 7.70e-11 | 63.9 |
Find 67 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAACTACGTTTGAATTTAA+AGG | 0.180670 | 4_1:-59013000 | Msa0559830:CDS |
| GTTTATCAACTCGTATTCTT+TGG | 0.236454 | 4_1:+59019513 | None:intergenic |
| AGTTTACATATACTCTTAAA+AGG | 0.252196 | 4_1:-59019436 | Msa0559830:CDS |
| AGAAATCATCAACACTAGTA+TGG | 0.260203 | 4_1:-59012786 | Msa0559830:CDS |
| CAGGAACTTCACTTGGAGTT+TGG | 0.267226 | 4_1:-59019931 | Msa0559830:CDS |
| AATAGCCTTAGCGGCAATAT+AGG | 0.286870 | 4_1:+59019895 | None:intergenic |
| CCTCACTTCTGAAACAATTA+AGG | 0.291254 | 4_1:-59019389 | Msa0559830:intron |
| GATCTTCTTGAATTACTATC+TGG | 0.333607 | 4_1:-59019721 | Msa0559830:CDS |
| CCCGTCATCACTCGAAGTTT+TGG | 0.336360 | 4_1:-59019554 | Msa0559830:CDS |
| AGGAACTTCACTTGGAGTTT+GGG | 0.343096 | 4_1:-59019930 | Msa0559830:CDS |
| TTTATCAACTCGTATTCTTT+GGG | 0.348547 | 4_1:+59019514 | None:intergenic |
| TCAAAATGCTCCTAAGCTTA+AGG | 0.349799 | 4_1:-59019152 | Msa0559830:CDS |
| TCATGAATTATTGTCTTTGT+CGG | 0.354616 | 4_1:-59019221 | Msa0559830:CDS |
| CACATTCCAATTGCAATTCT+CGG | 0.360549 | 4_1:+59019189 | None:intergenic |
| CCTTCTCTAATTTACTTGAA+TGG | 0.398004 | 4_1:+59012929 | None:intergenic |
| TCTGATAGTGGTTCTCCCAT+TGG | 0.400426 | 4_1:-59019595 | Msa0559830:CDS |
| TAGCGATCTCTCAGACGAAT+TGG | 0.410984 | 4_1:-59020223 | Msa0559830:CDS |
| GAATTATTGTCTTTGTCGGT+TGG | 0.412480 | 4_1:-59019217 | Msa0559830:CDS |
| ATAGCCTTAGCGGCAATATA+GGG | 0.419309 | 4_1:+59019896 | None:intergenic |
| CGTCTGAGAGATCGCTAAAC+CGG | 0.439027 | 4_1:+59020229 | None:intergenic |
| TGCAATTGGAATGTGCTTGT+TGG | 0.447677 | 4_1:-59019181 | Msa0559830:CDS |
| CGTACACTTGTGGGTTTCAA+AGG | 0.450086 | 4_1:-59019971 | Msa0559830:CDS |
| AAGGGAAAAGAGATATTGAT+AGG | 0.453862 | 4_1:+59019652 | None:intergenic |
| ATTAATTTGCAAGGTTCCAA+TGG | 0.458800 | 4_1:+59019579 | None:intergenic |
| GAATATCCGAGAATTGCAAT+TGG | 0.461307 | 4_1:-59019195 | Msa0559830:CDS |
| CTTAGCGGCAATATAGGGTT+AGG | 0.466079 | 4_1:+59019901 | None:intergenic |
| ACCATGTGACGTACACTTGT+GGG | 0.473340 | 4_1:-59019980 | Msa0559830:CDS |
| GGCATTAGATCTCAAGGTAC+AGG | 0.492910 | 4_1:-59019950 | Msa0559830:CDS |
| CAAGGTACAGGAACTTCACT+TGG | 0.494897 | 4_1:-59019938 | Msa0559830:CDS |
| ATGACAAGATCCTTAAGCTT+AGG | 0.497543 | 4_1:+59019142 | None:intergenic |
| GGAGGTTGGAAACTCGCGTT+GGG | 0.500783 | 4_1:-59013061 | Msa0559830:CDS |
| TTAATTTGCAAGGTTCCAAT+GGG | 0.510576 | 4_1:+59019580 | None:intergenic |
| CTTAATTGTTTCAGAAGTGA+GGG | 0.517383 | 4_1:+59019390 | None:intergenic |
| GTTGGAAACTCGCGTTGGGT+GGG | 0.517855 | 4_1:-59013057 | Msa0559830:CDS |
| ACAATAATTCATGAAAGGTA+AGG | 0.520337 | 4_1:+59019230 | None:intergenic |
| GGTTGGAAACTCGCGTTGGG+TGG | 0.520506 | 4_1:-59013058 | Msa0559830:CDS |
| TCAAAATATAAAAGCTGAGG+TGG | 0.521005 | 4_1:-59012974 | Msa0559830:CDS |
| ATCTGGTTGCCCACGTCTTG+AGG | 0.522358 | 4_1:-59019704 | Msa0559830:CDS |
| AACTCTCAAAGAAAGGAGGT+TGG | 0.527053 | 4_1:-59013075 | Msa0559830:CDS |
| GAAATCATCAACACTAGTAT+GGG | 0.529099 | 4_1:-59012785 | Msa0559830:CDS |
| CTACGTCTACATAATTATGA+TGG | 0.530026 | 4_1:-59020009 | Msa0559830:CDS |
| CCTTAATTGTTTCAGAAGTG+AGG | 0.531772 | 4_1:+59019389 | None:intergenic |
| TTCAAAGGCATTAGATCTCA+AGG | 0.534537 | 4_1:-59019956 | Msa0559830:CDS |
| TCCAAAACTTCGAGTGATGA+CGG | 0.542313 | 4_1:+59019553 | None:intergenic |
| AGACATGTCGGAGTCGTCGA+TGG | 0.543212 | 4_1:+59013033 | None:intergenic |
| TCGGATCTAAATAGCCTTAG+CGG | 0.552381 | 4_1:+59019886 | None:intergenic |
| AACCATGTGACGTACACTTG+TGG | 0.556597 | 4_1:-59019981 | Msa0559830:CDS |
| GTAGAAAGAAATTTACTCAA+GGG | 0.561818 | 4_1:-59012814 | Msa0559830:CDS |
| CTAACCCTATATTGCCGCTA+AGG | 0.563447 | 4_1:-59019900 | Msa0559830:CDS |
| ATATACAGATTTAATTTCTG+TGG | 0.565214 | 4_1:+59020068 | None:intergenic |
| CCAAAACTTCGAGTGATGAC+GGG | 0.570090 | 4_1:+59019554 | None:intergenic |
| TGACGGGACATTAATTTGCA+AGG | 0.576167 | 4_1:+59019570 | None:intergenic |
| GGTAGAAAGAAATTTACTCA+AGG | 0.579259 | 4_1:-59012815 | Msa0559830:CDS |
| ACCCACAAGTGTACGTCACA+TGG | 0.580936 | 4_1:+59019979 | None:intergenic |
| CAAAGACAATAATTCATGAA+AGG | 0.584106 | 4_1:+59019225 | None:intergenic |
| TAGAAAGAAATTTACTCAAG+GGG | 0.588300 | 4_1:-59012813 | Msa0559830:CDS |
| GGTAGAAAGAAAATTAGAGA+AGG | 0.591202 | 4_1:-59012872 | Msa0559830:CDS |
| AAACTAATTGAAAGACATGT+CGG | 0.600608 | 4_1:+59013021 | None:intergenic |
| GCTATGATGAAGAGTGTGAC+CGG | 0.614264 | 4_1:-59020248 | Msa0559830:CDS |
| GCTTAAGGATCTTGTCATTG+CGG | 0.614702 | 4_1:-59019137 | Msa0559830:intron |
| AGGAGGTTGGAAACTCGCGT+TGG | 0.618232 | 4_1:-59013062 | Msa0559830:CDS |
| ATTTAGATCCGAGTCACTCG+TGG | 0.620095 | 4_1:-59019875 | Msa0559830:intron |
| CCATTCAAGTAAATTAGAGA+AGG | 0.623380 | 4_1:-59012929 | Msa0559830:CDS |
| AAAAGAAATTCCTCAAGACG+TGG | 0.635871 | 4_1:+59019694 | None:intergenic |
| AATTCAAAATATAAAAGCTG+AGG | 0.652556 | 4_1:-59012977 | Msa0559830:CDS |
| AAAGAAATTCCTCAAGACGT+GGG | 0.667148 | 4_1:+59019695 | None:intergenic |
| AGCCAAGAAACTCAAAACAG+TGG | 0.691660 | 4_1:-59020274 | Msa0559830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAACAAAAATAACATAT+AGG | + | chr4_1:59013764-59013783 | None:intergenic | 10.0% |
| !!! | TTTTATGATAAAAAGTATTT+AGG | - | chr4_1:59014004-59014023 | Msa0559830:intron | 10.0% |
| !!! | TTTATGATAAAAAGTATTTA+GGG | - | chr4_1:59014005-59014024 | Msa0559830:intron | 10.0% |
| !!! | ATTTTGAATAAAATATCATA+AGG | + | chr4_1:59014413-59014432 | None:intergenic | 10.0% |
| !!! | CTATTTCTTTAATTTTATTT+TGG | - | chr4_1:59017197-59017216 | Msa0559830:intron | 10.0% |
| !! | TATACTTGAAAAATAAATTA+TGG | - | chr4_1:59017310-59017329 | Msa0559830:intron | 10.0% |
| !!! | ATACATTTTTTTTTTTTGGA+AGG | - | chr4_1:59013716-59013735 | Msa0559830:intron | 15.0% |
| !! | TTAGTTATTGAAAAATAAGA+AGG | + | chr4_1:59014065-59014084 | None:intergenic | 15.0% |
| !!! | CTTTTATATATATATAACTC+GGG | + | chr4_1:59014142-59014161 | None:intergenic | 15.0% |
| !!! | CCTTTTATATATATATAACT+CGG | + | chr4_1:59014143-59014162 | None:intergenic | 15.0% |
| !! | AGGTTTGTATTATTAAAAAT+GGG | + | chr4_1:59014393-59014412 | None:intergenic | 15.0% |
| !! | AAGGTTTGTATTATTAAAAA+TGG | + | chr4_1:59014394-59014413 | None:intergenic | 15.0% |
| !!! | TATCAAGAAAAAATATTTTC+AGG | + | chr4_1:59015538-59015557 | None:intergenic | 15.0% |
| !!! | ATATTTTAATTATTGTTACC+TGG | + | chr4_1:59016194-59016213 | None:intergenic | 15.0% |
| !!! | TCACTACTTTTATAATTTAA+AGG | + | chr4_1:59016804-59016823 | None:intergenic | 15.0% |
| !! | TATTATACTTATATTCTTTG+AGG | - | chr4_1:59017259-59017278 | Msa0559830:intron | 15.0% |
| !! | TATGTATAGATTTATTATAC+AGG | + | chr4_1:59017458-59017477 | None:intergenic | 15.0% |
| !! | TATTTGTAGATTTATTATAC+AGG | + | chr4_1:59017718-59017737 | None:intergenic | 15.0% |
| !! | TAAACTTTGATAAATATATG+AGG | - | chr4_1:59017823-59017842 | Msa0559830:intron | 15.0% |
| !!! | AAATTCATTAAAAGCTTTAT+AGG | + | chr4_1:59018184-59018203 | None:intergenic | 15.0% |
| !!! | TTTTAAACTTTTGAAATATG+TGG | - | chr4_1:59018565-59018584 | Msa0559830:intron | 15.0% |
| !!! | TTTAAACTTTTGAAATATGT+GGG | - | chr4_1:59018566-59018585 | Msa0559830:intron | 15.0% |
| !!! | TATCAAGAAAAAATATTTTC+AGG | + | chr4_1:59015538-59015557 | None:intergenic | 15.0% |
| !!! | ATATACAGATTTAATTTCTG+TGG | + | chr4_1:59012997-59013016 | None:intergenic | 20.0% |
| !! | AGTTTACATATACTCTTAAA+AGG | - | chr4_1:59013626-59013645 | Msa0559830:intron | 20.0% |
| !! | AACATATAGGTAACAAAATA+TGG | + | chr4_1:59013751-59013770 | None:intergenic | 20.0% |
| !! | ATTATGTTGTCAAAAAACAT+GGG | + | chr4_1:59014034-59014053 | None:intergenic | 20.0% |
| !! | TATTATGTTGTCAAAAAACA+TGG | + | chr4_1:59014035-59014054 | None:intergenic | 20.0% |
| !!! | TTTTTTGACAACATAATATG+TGG | - | chr4_1:59014037-59014056 | Msa0559830:intron | 20.0% |
| !! | CCGAGTTATATATATATAAA+AGG | - | chr4_1:59014140-59014159 | Msa0559830:intron | 20.0% |
| !!! | ATACCATACATACAAAATTT+TGG | + | chr4_1:59014170-59014189 | None:intergenic | 20.0% |
| !! | TTAAGATATTTGTTCCATAT+CGG | + | chr4_1:59014216-59014235 | None:intergenic | 20.0% |
| !! | TTTGTGCATCTATTAATTTA+CGG | + | chr4_1:59014282-59014301 | None:intergenic | 20.0% |
| !! | CTAAATTCAGTTAATTTCAT+TGG | + | chr4_1:59014305-59014324 | None:intergenic | 20.0% |
| !!! | TGTATTATTAAAAATGGGTT+CGG | + | chr4_1:59014388-59014407 | None:intergenic | 20.0% |
| !! | TTGATAAATGTTTATTTGAG+AGG | - | chr4_1:59014507-59014526 | Msa0559830:intron | 20.0% |
| !! | ATTTATAGTAAGAATTACAG+AGG | + | chr4_1:59014630-59014649 | None:intergenic | 20.0% |
| !! | AAATTTCAAGAATGATTGAA+GGG | + | chr4_1:59014699-59014718 | None:intergenic | 20.0% |
| !!! | TCTCATTTGAAACAATAAAT+TGG | - | chr4_1:59015221-59015240 | Msa0559830:intron | 20.0% |
| !!! | CTCATTTGAAACAATAAATT+GGG | - | chr4_1:59015222-59015241 | Msa0559830:intron | 20.0% |
| !! | ATTACTTTACAACAATCTTA+AGG | - | chr4_1:59015863-59015882 | Msa0559830:intron | 20.0% |
| !! | ACAAATAGATTTCATTAGAA+AGG | + | chr4_1:59015895-59015914 | None:intergenic | 20.0% |
| !!! | AAAATCACATTTTAATCACA+TGG | + | chr4_1:59016375-59016394 | None:intergenic | 20.0% |
| !! | TGCATAATTACTATCTTAAA+AGG | - | chr4_1:59016561-59016580 | Msa0559830:intron | 20.0% |
| !!! | TTCCATTTTTTGGATTAATT+GGG | - | chr4_1:59016646-59016665 | Msa0559830:intron | 20.0% |
| !! | ATTGCATTATTTGAATACAA+TGG | + | chr4_1:59017341-59017360 | None:intergenic | 20.0% |
| !!! | AGAATTATATTTTCTCAATG+TGG | - | chr4_1:59017477-59017496 | Msa0559830:intron | 20.0% |
| !!! | GAATTATATTTTCTCAATGT+GGG | - | chr4_1:59017478-59017497 | Msa0559830:intron | 20.0% |
| !!! | AATTATATTTTCTCAATGTG+GGG | - | chr4_1:59017479-59017498 | Msa0559830:intron | 20.0% |
| !!! | ACATTTTGATTTATTCTCAT+TGG | + | chr4_1:59017642-59017661 | None:intergenic | 20.0% |
| !! | TACAATTACTTTACTTATTG+TGG | - | chr4_1:59017661-59017680 | Msa0559830:intron | 20.0% |
| !! | ACAATTACTTTACTTATTGT+GGG | - | chr4_1:59017662-59017681 | Msa0559830:intron | 20.0% |
| !! | AATGAATTTCATATTCCTTA+TGG | - | chr4_1:59018195-59018214 | Msa0559830:intron | 20.0% |
| !! | ATGAATTTCATATTCCTTAT+GGG | - | chr4_1:59018196-59018215 | Msa0559830:intron | 20.0% |
| !! | TGTTAAGTATTATCATTCTA+GGG | - | chr4_1:59018461-59018480 | Msa0559830:intron | 20.0% |
| !! | TAGAAAAAAAAAAACTTCCT+GGG | + | chr4_1:59018540-59018559 | None:intergenic | 20.0% |
| !! | TTAGAAAAAAAAAAACTTCC+TGG | + | chr4_1:59018541-59018560 | None:intergenic | 20.0% |
| !!! | TTAAACTTTTGAAATATGTG+GGG | - | chr4_1:59018567-59018586 | Msa0559830:intron | 20.0% |
| !!! | TCTCATTTGAAACAATAAAT+TGG | - | chr4_1:59015221-59015240 | Msa0559830:intron | 20.0% |
| !!! | CTCATTTGAAACAATAAATT+GGG | - | chr4_1:59015222-59015241 | Msa0559830:intron | 20.0% |
| !!! | AAAAGCCTAACTTTAATTTT+TGG | - | chr4_1:59019933-59019952 | Msa0559830:CDS | 20.0% |
| !! | CAATACCAAAAATTAAAGTT+AGG | + | chr4_1:59019941-59019960 | None:intergenic | 20.0% |
| !! | TTAACTACGTTTGAATTTAA+AGG | - | chr4_1:59020062-59020081 | Msa0559830:CDS | 20.0% |
| !! | AATTCAAAATATAAAAGCTG+AGG | - | chr4_1:59020085-59020104 | Msa0559830:intron | 20.0% |
| !! | ACAGAAAAATTCAAAGAAAT+CGG | - | chr4_1:59020169-59020188 | Msa0559830:intron | 20.0% |
| !! | ACAGAAAAATTCAAAGAAAT+CGG | - | chr4_1:59020169-59020188 | Msa0559830:intron | 20.0% |
| ! | AAGTGTTCTATCTAAAAGAT+GGG | - | chr4_1:59012908-59012927 | Msa0559830:CDS | 25.0% |
| !!! | ATCTAAGCTTGATTTTAATG+AGG | - | chr4_1:59013304-59013323 | Msa0559830:intron | 25.0% |
| ! | TTTATCAACTCGTATTCTTT+GGG | + | chr4_1:59013551-59013570 | None:intergenic | 25.0% |
| ! | ACAATAATTCATGAAAGGTA+AGG | + | chr4_1:59013835-59013854 | None:intergenic | 25.0% |
| ! | CAAAGACAATAATTCATGAA+AGG | + | chr4_1:59013840-59013859 | None:intergenic | 25.0% |
| ! | TCATGAATTATTGTCTTTGT+CGG | - | chr4_1:59013841-59013860 | Msa0559830:intron | 25.0% |
| ! | TTTAAACTAGTGTATTTACC+CGG | - | chr4_1:59014111-59014130 | Msa0559830:intron | 25.0% |
| !! | TGACCAAAATTTTGTATGTA+TGG | - | chr4_1:59014164-59014183 | Msa0559830:intron | 25.0% |
| ! | TTCACAAACAAAATTTACCA+CGG | - | chr4_1:59014189-59014208 | Msa0559830:intron | 25.0% |
| ! | TTGTGCATCTATTAATTTAC+GGG | + | chr4_1:59014281-59014300 | None:intergenic | 25.0% |
| ! | ATAAATGTTTATTTGAGAGG+TGG | - | chr4_1:59014510-59014529 | Msa0559830:intron | 25.0% |
| ! | AGATCAAGATATGTACAAAA+GGG | + | chr4_1:59014604-59014623 | None:intergenic | 25.0% |
| ! | AAGATCAAGATATGTACAAA+AGG | + | chr4_1:59014605-59014624 | None:intergenic | 25.0% |
| ! | TTACTATAAATACTACGATC+CGG | - | chr4_1:59014639-59014658 | Msa0559830:intron | 25.0% |
| ! | CAAATTTCAAGAATGATTGA+AGG | + | chr4_1:59014700-59014719 | None:intergenic | 25.0% |
| !!! | GTGAGTTTTGTGTTTTTAAA+TGG | - | chr4_1:59014767-59014786 | Msa0559830:intron | 25.0% |
| !!! | ACATGGTATTTATTTTGCAA+CGG | - | chr4_1:59015246-59015265 | Msa0559830:intron | 25.0% |
| ! | CGTAAAAACCATATGTAAAT+TGG | + | chr4_1:59015362-59015381 | None:intergenic | 25.0% |
| !!! | AGGAAAACGATTTTTTCTTT+TGG | - | chr4_1:59015401-59015420 | Msa0559830:intron | 25.0% |
| !!! | CAAGAAAAAATATTTTCAGG+AGG | + | chr4_1:59015535-59015554 | None:intergenic | 25.0% |
| ! | TCTTTGATTAAAATCTATCG+CGG | + | chr4_1:59015940-59015959 | None:intergenic | 25.0% |
| ! | TCAAAGAACACAAAATTAGA+TGG | - | chr4_1:59015953-59015972 | Msa0559830:intron | 25.0% |
| ! | GATAACATTACCAAAAACAT+TGG | + | chr4_1:59016408-59016427 | None:intergenic | 25.0% |
| ! | ACATGAATATTGTAGAATTG+TGG | - | chr4_1:59016431-59016450 | Msa0559830:intron | 25.0% |
| !! | TTTTCATGATGTAATCTTTG+TGG | - | chr4_1:59016508-59016527 | Msa0559830:intron | 25.0% |
| ! | TAACGTTGAAATATCAAATG+AGG | - | chr4_1:59016585-59016604 | Msa0559830:intron | 25.0% |
| !!! | GTTCCATTTTTTGGATTAAT+TGG | - | chr4_1:59016645-59016664 | Msa0559830:intron | 25.0% |
| ! | TAATTGGGCCATTATTATTA+CGG | - | chr4_1:59016661-59016680 | Msa0559830:intron | 25.0% |
| !!! | TACCTTTTGACTTTTAAATG+AGG | - | chr4_1:59016918-59016937 | Msa0559830:intron | 25.0% |
| ! | ATCCTCATTTAAAAGTCAAA+AGG | + | chr4_1:59016923-59016942 | None:intergenic | 25.0% |
| ! | AAATAGTATCATTAGAGAGA+AGG | + | chr4_1:59017136-59017155 | None:intergenic | 25.0% |
| ! | TTCAATAAAAGAGTTAGTTG+AGG | - | chr4_1:59017221-59017240 | Msa0559830:intron | 25.0% |
| !!! | TCGAATTTATTTTCCATTGT+TGG | - | chr4_1:59017401-59017420 | Msa0559830:intron | 25.0% |
| !! | ATTATATTTTCTCAATGTGG+GGG | - | chr4_1:59017480-59017499 | Msa0559830:intron | 25.0% |
| !!! | ATTGCATTATTTTGATGCAA+TGG | + | chr4_1:59017598-59017617 | None:intergenic | 25.0% |
| ! | CAATTACTTTACTTATTGTG+GGG | - | chr4_1:59017663-59017682 | Msa0559830:intron | 25.0% |
| ! | TAGTCAATCTTATATGATGA+AGG | - | chr4_1:59017867-59017886 | Msa0559830:intron | 25.0% |
| ! | ACAAATTTATTTCATCCCAA+GGG | + | chr4_1:59017939-59017958 | None:intergenic | 25.0% |
| ! | AAATAAATTTGTGTACATCG+AGG | - | chr4_1:59017947-59017966 | Msa0559830:intron | 25.0% |
| ! | AATAAATTTGTGTACATCGA+GGG | - | chr4_1:59017948-59017967 | Msa0559830:intron | 25.0% |
| ! | ACTCGAAATTAATAAGTGAT+GGG | - | chr4_1:59017987-59018006 | Msa0559830:intron | 25.0% |
| ! | GTGTTAAGTATTATCATTCT+AGG | - | chr4_1:59018460-59018479 | Msa0559830:intron | 25.0% |
| !!! | TAAACTTTTGAAATATGTGG+GGG | - | chr4_1:59018568-59018587 | Msa0559830:intron | 25.0% |
| !!! | ACATGGTATTTATTTTGCAA+CGG | - | chr4_1:59015246-59015265 | Msa0559830:intron | 25.0% |
| ! | CGTAAAAACCATATGTAAAT+TGG | + | chr4_1:59015362-59015381 | None:intergenic | 25.0% |
| !!! | AGGAAAACGATTTTTTCTTT+TGG | - | chr4_1:59015401-59015420 | Msa0559830:intron | 25.0% |
| !!! | CAAGAAAAAATATTTTCAGG+AGG | + | chr4_1:59015535-59015554 | None:intergenic | 25.0% |
| ! | TAACAAAAACTCTCAAAGAA+AGG | - | chr4_1:59019980-59019999 | Msa0559830:CDS | 25.0% |
| ! | AAACTAATTGAAAGACATGT+CGG | + | chr4_1:59020044-59020063 | None:intergenic | 25.0% |
| ! | GTAGAAAGAAATTTACTCAA+GGG | - | chr4_1:59020248-59020267 | Msa0559830:CDS | 25.0% |
| ! | TAGAAAGAAATTTACTCAAG+GGG | - | chr4_1:59020249-59020268 | Msa0559830:CDS | 25.0% |
| CAAGTGTTCTATCTAAAAGA+TGG | - | chr4_1:59012907-59012926 | Msa0559830:CDS | 30.0% | |
| CTTCTGGTATTTCAAAGTTA+AGG | + | chr4_1:59012959-59012978 | None:intergenic | 30.0% | |
| CTACGTCTACATAATTATGA+TGG | - | chr4_1:59013053-59013072 | Msa0559830:CDS | 30.0% | |
| TCAAAAGAAGAATCAAGTGT+TGG | + | chr4_1:59013245-59013264 | None:intergenic | 30.0% | |
| !! | AAGCTTGATTTTAATGAGGA+TGG | - | chr4_1:59013308-59013327 | Msa0559830:intron | 30.0% |
| GATCTTCTTGAATTACTATC+TGG | - | chr4_1:59013341-59013360 | Msa0559830:intron | 30.0% | |
| !! | CTTGAGGAATTTCTTTTTCA+TGG | - | chr4_1:59013374-59013393 | Msa0559830:intron | 30.0% |
| AAGGGAAAAGAGATATTGAT+AGG | + | chr4_1:59013413-59013432 | None:intergenic | 30.0% | |
| CAGAAAACTTCCAAAAATTG+AGG | + | chr4_1:59013451-59013470 | None:intergenic | 30.0% | |
| !! | TTTTGGAAGTTTTCTGATAG+TGG | - | chr4_1:59013455-59013474 | Msa0559830:intron | 30.0% |
| !! | TTAATTTGCAAGGTTCCAAT+GGG | + | chr4_1:59013485-59013504 | None:intergenic | 30.0% |
| !! | ATTAATTTGCAAGGTTCCAA+TGG | + | chr4_1:59013486-59013505 | None:intergenic | 30.0% |
| GTTTATCAACTCGTATTCTT+TGG | + | chr4_1:59013552-59013571 | None:intergenic | 30.0% | |
| CTTAATTGTTTCAGAAGTGA+GGG | + | chr4_1:59013675-59013694 | None:intergenic | 30.0% | |
| !! | TGTTATGCAGTTTTTAAGCA+TGG | - | chr4_1:59013784-59013803 | Msa0559830:intron | 30.0% |
| GATCAAGATATGTACAAAAG+GGG | + | chr4_1:59014603-59014622 | None:intergenic | 30.0% | |
| !! | AAAACTCACTGCAGTTTTAA+AGG | + | chr4_1:59014756-59014775 | None:intergenic | 30.0% |
| !! | AGTTGTTGCTTGCTATAATT+AGG | - | chr4_1:59014899-59014918 | Msa0559830:intron | 30.0% |
| TTAGGATGACATCATTACTT+TGG | - | chr4_1:59014917-59014936 | Msa0559830:intron | 30.0% | |
| ! | AGACAAAATTGTGCTTTTGT+TGG | - | chr4_1:59014968-59014987 | Msa0559830:intron | 30.0% |
| !! | TTAGCTTTTTGAGCATAACT+AGG | + | chr4_1:59015336-59015355 | None:intergenic | 30.0% |
| ! | GTTCTTTTACTTTCAAGATC+AGG | - | chr4_1:59015381-59015400 | Msa0559830:intron | 30.0% |
| TGAAGCATAAAAAGGAAAGA+GGG | + | chr4_1:59015460-59015479 | None:intergenic | 30.0% | |
| TTGAAGCATAAAAAGGAAAG+AGG | + | chr4_1:59015461-59015480 | None:intergenic | 30.0% | |
| GTATAGCTTGAAGCATAAAA+AGG | + | chr4_1:59015468-59015487 | None:intergenic | 30.0% | |
| ATGAGTCTGACATATAATTC+TGG | - | chr4_1:59015502-59015521 | Msa0559830:intron | 30.0% | |
| TGAGTCTGACATATAATTCT+GGG | - | chr4_1:59015503-59015522 | Msa0559830:intron | 30.0% | |
| GGTTTCATATGAATTGTTGA+AGG | - | chr4_1:59015690-59015709 | Msa0559830:intron | 30.0% | |
| TTCATATGAATTGTTGAAGG+AGG | - | chr4_1:59015693-59015712 | Msa0559830:intron | 30.0% | |
| CTTAATATTGTAGTACGACT+TGG | + | chr4_1:59015745-59015764 | None:intergenic | 30.0% | |
| ATTAGATGGTGTGAGATTAT+TGG | - | chr4_1:59015967-59015986 | Msa0559830:intron | 30.0% | |
| !! | CTTTGAGACATGAAAGATAA+TGG | - | chr4_1:59016075-59016094 | Msa0559830:intron | 30.0% |
| GCAACCTAATCAATTTCATT+GGG | + | chr4_1:59016108-59016127 | None:intergenic | 30.0% | |
| AGCAACCTAATCAATTTCAT+TGG | + | chr4_1:59016109-59016128 | None:intergenic | 30.0% | |
| ! | GGTAAGCTTATACTGAATTT+TGG | - | chr4_1:59016155-59016174 | Msa0559830:intron | 30.0% |
| !! | ACTGAATTTTGGTAGATAAC+CGG | - | chr4_1:59016166-59016185 | Msa0559830:intron | 30.0% |
| TAATTATTGTTACCTGGTTC+CGG | + | chr4_1:59016188-59016207 | None:intergenic | 30.0% | |
| GATACGTAAGTCACAAATAA+AGG | + | chr4_1:59016251-59016270 | None:intergenic | 30.0% | |
| ! | AGAAGGTTTAGCACAATTTT+TGG | + | chr4_1:59016286-59016305 | None:intergenic | 30.0% |
| ATAGAAACATTTGTGACAGT+GGG | + | chr4_1:59016312-59016331 | None:intergenic | 30.0% | |
| TTTGTTTGTCGTACGTATAT+CGG | - | chr4_1:59016338-59016357 | Msa0559830:intron | 30.0% | |
| !!! | TTATCCACTGTTCCATTTTT+TGG | - | chr4_1:59016636-59016655 | Msa0559830:intron | 30.0% |
| TAATCCAAAAAATGGAACAG+TGG | + | chr4_1:59016643-59016662 | None:intergenic | 30.0% | |
| ACAAGCAACCGTAATAATAA+TGG | + | chr4_1:59016672-59016691 | None:intergenic | 30.0% | |
| ! | TTATGACAGCTCTTTTCAAA+AGG | - | chr4_1:59016862-59016881 | Msa0559830:intron | 30.0% |
| TCATGAGATATCATATGTGA+AGG | - | chr4_1:59016885-59016904 | Msa0559830:intron | 30.0% | |
| ! | TAGTTTGAATGTGCATGTTT+TGG | - | chr4_1:59017006-59017025 | Msa0559830:intron | 30.0% |
| ! | CTATGAGATTTTGTGCATAT+TGG | - | chr4_1:59017086-59017105 | Msa0559830:intron | 30.0% |
| ATAGAAGTAATCAAACTGTG+AGG | + | chr4_1:59017181-59017200 | None:intergenic | 30.0% | |
| CATTCTTGATATACTTCATC+AGG | + | chr4_1:59017534-59017553 | None:intergenic | 30.0% | |
| !! | ATTGATAGTGATGTCACTTA+AGG | - | chr4_1:59017755-59017774 | Msa0559830:intron | 30.0% |
| CAAATTTATTTCATCCCAAG+GGG | + | chr4_1:59017938-59017957 | None:intergenic | 30.0% | |
| CACAAATTTATTTCATCCCA+AGG | + | chr4_1:59017940-59017959 | None:intergenic | 30.0% | |
| ATAAATTTGTGTACATCGAG+GGG | - | chr4_1:59017949-59017968 | Msa0559830:intron | 30.0% | |
| ! | TTATTAATTTCGAGTGGCTT+AGG | + | chr4_1:59017982-59018001 | None:intergenic | 30.0% |
| CATCACTTATTAATTTCGAG+TGG | + | chr4_1:59017988-59018007 | None:intergenic | 30.0% | |
| CACTCGAAATTAATAAGTGA+TGG | - | chr4_1:59017986-59018005 | Msa0559830:intron | 30.0% | |
| AATTTCATATTCCTTATGGG+TGG | - | chr4_1:59018199-59018218 | Msa0559830:intron | 30.0% | |
| ! | TAACATACACCAAGTGATTT+TGG | - | chr4_1:59018406-59018425 | Msa0559830:intron | 30.0% |
| CTATATGAACCAAAATCACT+TGG | + | chr4_1:59018418-59018437 | None:intergenic | 30.0% | |
| !! | TTAGCTTTTTGAGCATAACT+AGG | + | chr4_1:59015336-59015355 | None:intergenic | 30.0% |
| ! | GTTCTTTTACTTTCAAGATC+AGG | - | chr4_1:59015381-59015400 | Msa0559830:intron | 30.0% |
| TGAAGCATAAAAAGGAAAGA+GGG | + | chr4_1:59015460-59015479 | None:intergenic | 30.0% | |
| TTGAAGCATAAAAAGGAAAG+AGG | + | chr4_1:59015461-59015480 | None:intergenic | 30.0% | |
| GTATAGCTTGAAGCATAAAA+AGG | + | chr4_1:59015468-59015487 | None:intergenic | 30.0% | |
| ATGAGTCTGACATATAATTC+TGG | - | chr4_1:59015502-59015521 | Msa0559830:intron | 30.0% | |
| TGAGTCTGACATATAATTCT+GGG | - | chr4_1:59015503-59015522 | Msa0559830:intron | 30.0% | |
| GGTTTCATATGAATTGTTGA+AGG | - | chr4_1:59015690-59015709 | Msa0559830:intron | 30.0% | |
| TTCATATGAATTGTTGAAGG+AGG | - | chr4_1:59015693-59015712 | Msa0559830:intron | 30.0% | |
| CTTAATATTGTAGTACGACT+TGG | + | chr4_1:59015745-59015764 | None:intergenic | 30.0% | |
| !! | AGACAAAATTGTGTTTTTGC+TGG | - | chr4_1:59019476-59019495 | Msa0559830:CDS | 30.0% |
| TTCGTGTATATAGTCTACAT+GGG | + | chr4_1:59019883-59019902 | None:intergenic | 30.0% | |
| TCAAAATATAAAAGCTGAGG+TGG | - | chr4_1:59020088-59020107 | Msa0559830:intron | 30.0% | |
| CCTTCTCTAATTTACTTGAA+TGG | + | chr4_1:59020136-59020155 | None:intergenic | 30.0% | |
| CCATTCAAGTAAATTAGAGA+AGG | - | chr4_1:59020133-59020152 | Msa0559830:intron | 30.0% | |
| GGTAGAAAGAAAATTAGAGA+AGG | - | chr4_1:59020190-59020209 | Msa0559830:CDS | 30.0% | |
| GGTAGAAAGAAATTTACTCA+AGG | - | chr4_1:59020247-59020266 | Msa0559830:CDS | 30.0% | |
| AGAAATCATCAACACTAGTA+TGG | - | chr4_1:59020276-59020295 | Msa0559830:CDS | 30.0% | |
| GAAATCATCAACACTAGTAT+GGG | - | chr4_1:59020277-59020296 | Msa0559830:CDS | 30.0% | |
| !!! | ATCTGTATGCTGCTTTTGTT+GGG | + | chr4_1:59012887-59012906 | None:intergenic | 35.0% |
| GTATTTCAAAGTTAAGGTCG+AGG | + | chr4_1:59012953-59012972 | None:intergenic | 35.0% | |
| GAAATACCAGAAGTAGTTTC+AGG | - | chr4_1:59012966-59012985 | Msa0559830:CDS | 35.0% | |
| !! | TTCAAAGGCATTAGATCTCA+AGG | - | chr4_1:59013106-59013125 | Msa0559830:intron | 35.0% |
| AGATGAAGAATCTTTAGCGA+TGG | + | chr4_1:59013278-59013297 | None:intergenic | 35.0% | |
| AAAGAAATTCCTCAAGACGT+GGG | + | chr4_1:59013370-59013389 | None:intergenic | 35.0% | |
| AAAAGAAATTCCTCAAGACG+TGG | + | chr4_1:59013371-59013390 | None:intergenic | 35.0% | |
| ! | TCTCTTTTCCCTTGTTAACA+AGG | - | chr4_1:59013420-59013439 | Msa0559830:intron | 35.0% |
| AGGTCTAACCTTGTTAACAA+GGG | + | chr4_1:59013431-59013450 | None:intergenic | 35.0% | |
| ! | CAAGGTTAGACCTCAATTTT+TGG | - | chr4_1:59013438-59013457 | Msa0559830:intron | 35.0% |
| CCTTAATTGTTTCAGAAGTG+AGG | + | chr4_1:59013676-59013695 | None:intergenic | 35.0% | |
| !! | CCTCACTTCTGAAACAATTA+AGG | - | chr4_1:59013673-59013692 | Msa0559830:intron | 35.0% |
| !! | TATGCAGTTTTTAAGCATGG+AGG | - | chr4_1:59013787-59013806 | Msa0559830:intron | 35.0% |
| GAATTATTGTCTTTGTCGGT+TGG | - | chr4_1:59013845-59013864 | Msa0559830:intron | 35.0% | |
| GAATATCCGAGAATTGCAAT+TGG | - | chr4_1:59013867-59013886 | Msa0559830:intron | 35.0% | |
| CACATTCCAATTGCAATTCT+CGG | + | chr4_1:59013876-59013895 | None:intergenic | 35.0% | |
| TCAAAATGCTCCTAAGCTTA+AGG | - | chr4_1:59013910-59013929 | Msa0559830:intron | 35.0% | |
| ATGACAAGATCCTTAAGCTT+AGG | + | chr4_1:59013923-59013942 | None:intergenic | 35.0% | |
| TCTCATCAAACTATCCATTC+CGG | - | chr4_1:59014560-59014579 | Msa0559830:intron | 35.0% | |
| ATATGTACAAAAGGGGATTG+AGG | + | chr4_1:59014596-59014615 | None:intergenic | 35.0% | |
| GATGGGTATTCGATAAGTAT+TGG | + | chr4_1:59014677-59014696 | None:intergenic | 35.0% | |
| TCAAGAATGATTGAAGGGAT+GGG | + | chr4_1:59014694-59014713 | None:intergenic | 35.0% | |
| TTCAAGAATGATTGAAGGGA+TGG | + | chr4_1:59014695-59014714 | None:intergenic | 35.0% | |
| GTTACTGTAGTGACAAAAAG+AGG | - | chr4_1:59014728-59014747 | Msa0559830:intron | 35.0% | |
| CTTCTATCATGTCGTTCTTT+CGG | - | chr4_1:59014798-59014817 | Msa0559830:intron | 35.0% | |
| !!! | TTGTTTTTGTAGCTATAGCG+TGG | - | chr4_1:59014841-59014860 | Msa0559830:intron | 35.0% |
| !! | GATTCTGAGACATAGCTAAT+TGG | + | chr4_1:59014946-59014965 | None:intergenic | 35.0% |
| !! | TTTAGCCACATCATTTTGAC+TGG | - | chr4_1:59015187-59015206 | Msa0559830:intron | 35.0% |
| TTAGTCCAGTCAAAATGATG+TGG | + | chr4_1:59015195-59015214 | None:intergenic | 35.0% | |
| GAAACAATAAATTGGGCACA+TGG | - | chr4_1:59015229-59015248 | Msa0559830:intron | 35.0% | |
| GCTAACTGCCAATTTACATA+TGG | - | chr4_1:59015351-59015370 | Msa0559830:intron | 35.0% | |
| !! | TATACCGGTTTACTATTGTG+TGG | - | chr4_1:59015668-59015687 | Msa0559830:intron | 35.0% |
| !! | ATACCGGTTTACTATTGTGT+GGG | - | chr4_1:59015669-59015688 | Msa0559830:intron | 35.0% |
| AAACCCACACAATAGTAAAC+CGG | + | chr4_1:59015675-59015694 | None:intergenic | 35.0% | |
| TTGATTAAAATCTATCGCGG+TGG | + | chr4_1:59015937-59015956 | None:intergenic | 35.0% | |
| ! | TGGTGTGAGATTATTGGTTA+TGG | - | chr4_1:59015973-59015992 | Msa0559830:intron | 35.0% |
| GCTTCCCAATGAAATTGATT+AGG | - | chr4_1:59016101-59016120 | Msa0559830:intron | 35.0% | |
| !! | AAGCCATTGATGATGACAAT+AGG | - | chr4_1:59016130-59016149 | Msa0559830:intron | 35.0% |
| CTTCCTATTGTCATCATCAA+TGG | + | chr4_1:59016136-59016155 | None:intergenic | 35.0% | |
| !! | CATTGATGATGACAATAGGA+AGG | - | chr4_1:59016134-59016153 | Msa0559830:intron | 35.0% |
| !!! | CAATTTTTGGCAATGAGGAA+TGG | + | chr4_1:59016273-59016292 | None:intergenic | 35.0% |
| !!! | TAGCACAATTTTTGGCAATG+AGG | + | chr4_1:59016278-59016297 | None:intergenic | 35.0% |
| CATAGAAACATTTGTGACAG+TGG | + | chr4_1:59016313-59016332 | None:intergenic | 35.0% | |
| AATTGTGGCTATACTTGCAT+TGG | - | chr4_1:59016446-59016465 | Msa0559830:intron | 35.0% | |
| GGCCCAATTAATCCAAAAAA+TGG | + | chr4_1:59016651-59016670 | None:intergenic | 35.0% | |
| AAGTGACATCACTATCAATG+TGG | + | chr4_1:59017754-59017773 | None:intergenic | 35.0% | |
| TCCCATGAATAAGGTTCATA+TGG | - | chr4_1:59018033-59018052 | Msa0559830:intron | 35.0% | |
| CCCATATGAACCTTATTCAT+GGG | + | chr4_1:59018037-59018056 | None:intergenic | 35.0% | |
| CCCATGAATAAGGTTCATAT+GGG | - | chr4_1:59018034-59018053 | Msa0559830:intron | 35.0% | |
| ACCCATATGAACCTTATTCA+TGG | + | chr4_1:59018038-59018057 | None:intergenic | 35.0% | |
| !! | AATCACTTGGTGTATGTTAG+CGG | + | chr4_1:59018405-59018424 | None:intergenic | 35.0% |
| TACTTAACACACAGTGAAGT+TGG | + | chr4_1:59018450-59018469 | None:intergenic | 35.0% | |
| !! | AAGTATTATCATTCTAGGGC+TGG | - | chr4_1:59018465-59018484 | Msa0559830:intron | 35.0% |
| !! | TTTAGCCACATCATTTTGAC+TGG | - | chr4_1:59015187-59015206 | Msa0559830:intron | 35.0% |
| TTAGTCCAGTCAAAATGATG+TGG | + | chr4_1:59015195-59015214 | None:intergenic | 35.0% | |
| GAAACAATAAATTGGGCACA+TGG | - | chr4_1:59015229-59015248 | Msa0559830:intron | 35.0% | |
| GCTAACTGCCAATTTACATA+TGG | - | chr4_1:59015351-59015370 | Msa0559830:intron | 35.0% | |
| !! | TATACCGGTTTACTATTGTG+TGG | - | chr4_1:59015668-59015687 | Msa0559830:intron | 35.0% |
| !! | ATACCGGTTTACTATTGTGT+GGG | - | chr4_1:59015669-59015688 | Msa0559830:intron | 35.0% |
| AAACCCACACAATAGTAAAC+CGG | + | chr4_1:59015675-59015694 | None:intergenic | 35.0% | |
| ! | CTTTACAACAGTGCTTTTGT+TGG | - | chr4_1:59019410-59019429 | Msa0559830:CDS | 35.0% |
| AGATAGATCACTGATCGATA+CGG | - | chr4_1:59019527-59019546 | Msa0559830:CDS | 35.0% | |
| CTTCGTGTATATAGTCTACA+TGG | + | chr4_1:59019884-59019903 | None:intergenic | 35.0% | |
| CAAAAACTCTCAAAGAAAGG+AGG | - | chr4_1:59019983-59020002 | Msa0559830:CDS | 35.0% | |
| AGCCAAGAAACTCAAAACAG+TGG | - | chr4_1:59012788-59012807 | Msa0559830:CDS | 40.0% | |
| !!! | AGCCACTGTTTTGAGTTTCT+TGG | + | chr4_1:59012793-59012812 | None:intergenic | 40.0% |
| !!! | GATCTGTATGCTGCTTTTGT+TGG | + | chr4_1:59012888-59012907 | None:intergenic | 40.0% |
| AGGAACTTCACTTGGAGTTT+GGG | - | chr4_1:59013132-59013151 | Msa0559830:intron | 40.0% | |
| ! | ATAGCCTTAGCGGCAATATA+GGG | + | chr4_1:59013169-59013188 | None:intergenic | 40.0% |
| ! | AATAGCCTTAGCGGCAATAT+AGG | + | chr4_1:59013170-59013189 | None:intergenic | 40.0% |
| ! | TCGGATCTAAATAGCCTTAG+CGG | + | chr4_1:59013179-59013198 | None:intergenic | 40.0% |
| !!! | TTTTAAGACCACGAGTGACT+CGG | + | chr4_1:59013198-59013217 | None:intergenic | 40.0% |
| GAGGTCTAACCTTGTTAACA+AGG | + | chr4_1:59013432-59013451 | None:intergenic | 40.0% | |
| !! | TGACGGGACATTAATTTGCA+AGG | + | chr4_1:59013495-59013514 | None:intergenic | 40.0% |
| TCCAAAACTTCGAGTGATGA+CGG | + | chr4_1:59013512-59013531 | None:intergenic | 40.0% | |
| TGCAATTGGAATGTGCTTGT+TGG | - | chr4_1:59013881-59013900 | Msa0559830:intron | 40.0% | |
| GCTTAAGGATCTTGTCATTG+CGG | - | chr4_1:59013925-59013944 | Msa0559830:intron | 40.0% | |
| AAATTTACCACGGACCGATA+TGG | - | chr4_1:59014199-59014218 | Msa0559830:intron | 40.0% | |
| TAGTTTGATGAGAGGTTGAG+AGG | + | chr4_1:59014553-59014572 | None:intergenic | 40.0% | |
| GGAATGGATAGTTTGATGAG+AGG | + | chr4_1:59014561-59014580 | None:intergenic | 40.0% | |
| TTTCGGATTGCGCATCAAAT+GGG | - | chr4_1:59014815-59014834 | Msa0559830:intron | 40.0% | |
| AGCTATAGCGTGGATACTTT+CGG | - | chr4_1:59014851-59014870 | Msa0559830:intron | 40.0% | |
| ! | TCTTGATAGTTCTGCATCCT+TGG | - | chr4_1:59015550-59015569 | Msa0559830:intron | 40.0% |
| ! | CTCTTCTTGGTTTGAAACCA+AGG | + | chr4_1:59015570-59015589 | None:intergenic | 40.0% |
| ATGAGGCGGATAAATCCTTA+AGG | - | chr4_1:59015618-59015637 | Msa0559830:intron | 40.0% | |
| GTAAACCGGTATATAACCTG+AGG | + | chr4_1:59015661-59015680 | None:intergenic | 40.0% | |
| ACGTTGTGATAGAGATGTGT+CGG | - | chr4_1:59015716-59015735 | Msa0559830:intron | 40.0% | |
| ATTAAAATCTATCGCGGTGG+TGG | + | chr4_1:59015934-59015953 | None:intergenic | 40.0% | |
| CGATCAAATTCTGCCTTGAT+TGG | + | chr4_1:59016048-59016067 | None:intergenic | 40.0% | |
| TCAAGGCAGAATTTGATCGA+TGG | - | chr4_1:59016049-59016068 | Msa0559830:intron | 40.0% | |
| ! | TCTTGTGCTGCCAATGTTTT+TGG | - | chr4_1:59016395-59016414 | Msa0559830:intron | 40.0% |
| AAGTGACAACACTCCAACAA+TGG | + | chr4_1:59017417-59017436 | None:intergenic | 40.0% | |
| GATCTCCAATCACAAAGGTT+GGG | + | chr4_1:59018015-59018034 | None:intergenic | 40.0% | |
| GATTGGAGATCCCATGAATA+AGG | - | chr4_1:59018024-59018043 | Msa0559830:intron | 40.0% | |
| ! | TTGTTTTCGTCCCTTTCCTA+TGG | - | chr4_1:59018115-59018134 | Msa0559830:intron | 40.0% |
| CAAATCATACACCACCCATA+AGG | + | chr4_1:59018213-59018232 | None:intergenic | 40.0% | |
| TTGCCAAGATCTCATACAAG+CGG | + | chr4_1:59018280-59018299 | None:intergenic | 40.0% | |
| TGAGATCTTGGCAAAATCTC+TGG | - | chr4_1:59018286-59018305 | Msa0559830:intron | 40.0% | |
| GAGCACTCATGAAATAATCC+AGG | - | chr4_1:59018308-59018327 | Msa0559830:intron | 40.0% | |
| CTAGATGTGATGCATCAAAC+TGG | + | chr4_1:59018509-59018528 | None:intergenic | 40.0% | |
| CAGTTTGATGCATCACATCT+AGG | - | chr4_1:59018507-59018526 | Msa0559830:intron | 40.0% | |
| ! | TCTTGATAGTTCTGCATCCT+TGG | - | chr4_1:59015550-59015569 | Msa0559830:intron | 40.0% |
| ! | CTCTTCTTGGTTTGAAACCA+AGG | + | chr4_1:59015570-59015589 | None:intergenic | 40.0% |
| ATGAGGCGGATAAATCCTTA+AGG | - | chr4_1:59015618-59015637 | Msa0559830:intron | 40.0% | |
| GTAAACCGGTATATAACCTG+AGG | + | chr4_1:59015661-59015680 | None:intergenic | 40.0% | |
| TTGTGATAGAGATGTGTCGT+TGG | - | chr4_1:59019262-59019281 | Msa0559830:CDS | 40.0% | |
| ! | TATGTCACATGTCGCTTCTA+CGG | + | chr4_1:59019750-59019769 | None:intergenic | 40.0% |
| AACTCTCAAAGAAAGGAGGT+TGG | - | chr4_1:59019987-59020006 | Msa0559830:CDS | 40.0% | |
| ! | GCTATGATGAAGAGTGTGAC+CGG | - | chr4_1:59012814-59012833 | Msa0559830:CDS | 45.0% |
| TAGCGATCTCTCAGACGAAT+TGG | - | chr4_1:59012839-59012858 | Msa0559830:CDS | 45.0% | |
| !!! | TGTATGCTGCTTTTGTTGGG+AGG | + | chr4_1:59012884-59012903 | None:intergenic | 45.0% |
| AAAGTTAAGGTCGAGGATCG+TGG | + | chr4_1:59012946-59012965 | None:intergenic | 45.0% | |
| GACGAACCTGAAACTACTTC+TGG | + | chr4_1:59012975-59012994 | None:intergenic | 45.0% | |
| AACCATGTGACGTACACTTG+TGG | - | chr4_1:59013081-59013100 | Msa0559830:CDS | 45.0% | |
| ACCATGTGACGTACACTTGT+GGG | - | chr4_1:59013082-59013101 | Msa0559830:CDS | 45.0% | |
| CGTACACTTGTGGGTTTCAA+AGG | - | chr4_1:59013091-59013110 | Msa0559830:CDS | 45.0% | |
| GGCATTAGATCTCAAGGTAC+AGG | - | chr4_1:59013112-59013131 | Msa0559830:intron | 45.0% | |
| CAAGGTACAGGAACTTCACT+TGG | - | chr4_1:59013124-59013143 | Msa0559830:intron | 45.0% | |
| CAGGAACTTCACTTGGAGTT+TGG | - | chr4_1:59013131-59013150 | Msa0559830:intron | 45.0% | |
| CTTAGCGGCAATATAGGGTT+AGG | + | chr4_1:59013164-59013183 | None:intergenic | 45.0% | |
| CTAACCCTATATTGCCGCTA+AGG | - | chr4_1:59013162-59013181 | Msa0559830:intron | 45.0% | |
| ATTTAGATCCGAGTCACTCG+TGG | - | chr4_1:59013187-59013206 | Msa0559830:intron | 45.0% | |
| ! | CTCGTGGTCTTAAAATTGCG+TGG | - | chr4_1:59013203-59013222 | Msa0559830:intron | 45.0% |
| !! | TCTGATAGTGGTTCTCCCAT+TGG | - | chr4_1:59013467-59013486 | Msa0559830:intron | 45.0% |
| CCAAAACTTCGAGTGATGAC+GGG | + | chr4_1:59013511-59013530 | None:intergenic | 45.0% | |
| ATATATAACTCGGGCAACGC+CGG | + | chr4_1:59014133-59014152 | None:intergenic | 45.0% | |
| ATTTGTTCCATATCGGTCCG+TGG | + | chr4_1:59014209-59014228 | None:intergenic | 45.0% | |
| GTTCGGAATTCTGCGAGTTT+GGG | + | chr4_1:59014371-59014390 | None:intergenic | 45.0% | |
| TTTGATGAGAGGTTGAGAGG+TGG | + | chr4_1:59014550-59014569 | None:intergenic | 45.0% | |
| TGTACAAAAGGGGATTGAGG+AGG | + | chr4_1:59014593-59014612 | None:intergenic | 45.0% | |
| ! | GTATTGGCGATGATGTAGTC+CGG | + | chr4_1:59014661-59014680 | None:intergenic | 45.0% |
| CTTTCGGATTGCGCATCAAA+TGG | - | chr4_1:59014814-59014833 | Msa0559830:intron | 45.0% | |
| CGTGGATACTTTCGGTTGAA+GGG | - | chr4_1:59014859-59014878 | Msa0559830:intron | 45.0% | |
| TTGTGATAGAGATGTGTCGG+TGG | - | chr4_1:59015719-59015738 | Msa0559830:intron | 45.0% | |
| !! | GGTGGTGGATCTGAGAATTA+GGG | + | chr4_1:59015919-59015938 | None:intergenic | 45.0% |
| TATGGTGTCCACGAAGTGAT+TGG | - | chr4_1:59015991-59016010 | Msa0559830:intron | 45.0% | |
| AAATGCGACCAATCACTTCG+TGG | + | chr4_1:59016002-59016021 | None:intergenic | 45.0% | |
| TGGTCGCATTTGTCATGTCT+TGG | - | chr4_1:59016011-59016030 | Msa0559830:intron | 45.0% | |
| TTTGGTAGATAACCGGAACC+AGG | - | chr4_1:59016173-59016192 | Msa0559830:intron | 45.0% | |
| TTTGTGACAGTGGGATCAGA+AGG | + | chr4_1:59016303-59016322 | None:intergenic | 45.0% | |
| AGCTACTAAACAAAGCCCCT+TGG | - | chr4_1:59017920-59017939 | Msa0559830:intron | 45.0% | |
| GCTACTAAACAAAGCCCCTT+GGG | - | chr4_1:59017921-59017940 | Msa0559830:intron | 45.0% | |
| TTTGTGTACATCGAGGGGAT+TGG | - | chr4_1:59017954-59017973 | Msa0559830:intron | 45.0% | |
| TTGTGTACATCGAGGGGATT+GGG | - | chr4_1:59017955-59017974 | Msa0559830:intron | 45.0% | |
| GGATCTCCAATCACAAAGGT+TGG | + | chr4_1:59018016-59018035 | None:intergenic | 45.0% | |
| CATGGGATCTCCAATCACAA+AGG | + | chr4_1:59018020-59018039 | None:intergenic | 45.0% | |
| CTCACACACACCATAGGAAA+GGG | + | chr4_1:59018128-59018147 | None:intergenic | 45.0% | |
| TCTCACACACACCATAGGAA+AGG | + | chr4_1:59018129-59018148 | None:intergenic | 45.0% | |
| CTAGACACTGCATTACTGAG+AGG | - | chr4_1:59018153-59018172 | Msa0559830:intron | 45.0% | |
| TCACCTATGTGAGTGTCAAG+TGG | - | chr4_1:59018252-59018271 | Msa0559830:intron | 45.0% | |
| CACCTATGTGAGTGTCAAGT+GGG | - | chr4_1:59018253-59018272 | Msa0559830:intron | 45.0% | |
| ACCTATGTGAGTGTCAAGTG+GGG | - | chr4_1:59018254-59018273 | Msa0559830:intron | 45.0% | |
| AATTCTTGATGTTGGCGCTG+TGG | + | chr4_1:59018357-59018376 | None:intergenic | 45.0% | |
| AGCGCCAACATCAAGAATTG+TGG | - | chr4_1:59018358-59018377 | Msa0559830:intron | 45.0% | |
| GCGCCAACATCAAGAATTGT+GGG | - | chr4_1:59018359-59018378 | Msa0559830:intron | 45.0% | |
| CGCCAACATCAAGAATTGTG+GGG | - | chr4_1:59018360-59018379 | Msa0559830:intron | 45.0% | |
| GCCAACATCAAGAATTGTGG+GGG | - | chr4_1:59018361-59018380 | Msa0559830:intron | 45.0% | |
| ACCCCCACAATTCTTGATGT+TGG | + | chr4_1:59018365-59018384 | None:intergenic | 45.0% | |
| ! | CACATCTAGGATGTTAACCC+AGG | - | chr4_1:59018520-59018539 | Msa0559830:intron | 45.0% |
| AGATCACTGATCGATACGGT+TGG | - | chr4_1:59019531-59019550 | Msa0559830:CDS | 45.0% | |
| !!! | TATTATACATTTTTTTTTTT+TGG | - | chr4_1:59013712-59013731 | Msa0559830:intron | 5.0% |
| !!! | ATTAATTATAATATTTTACT+TGG | - | chr4_1:59015155-59015174 | Msa0559830:intron | 5.0% |
| !!! | TTAATTAATTAACTAATTTT+TGG | + | chr4_1:59018092-59018111 | None:intergenic | 5.0% |
| !!! | ATTAATTATAATATTTTACT+TGG | - | chr4_1:59015155-59015174 | Msa0559830:intron | 5.0% |
| CGTCTGAGAGATCGCTAAAC+CGG | + | chr4_1:59012836-59012855 | None:intergenic | 50.0% | |
| ACCCACAAGTGTACGTCACA+TGG | + | chr4_1:59013086-59013105 | None:intergenic | 50.0% | |
| ! | CCCGTCATCACTCGAAGTTT+TGG | - | chr4_1:59013508-59013527 | Msa0559830:intron | 50.0% |
| TATATAACTCGGGCAACGCC+GGG | + | chr4_1:59014132-59014151 | None:intergenic | 50.0% | |
| GGTTCGGAATTCTGCGAGTT+TGG | + | chr4_1:59014372-59014391 | None:intergenic | 50.0% | |
| GGATTGAGGAGGAGTTTCTC+CGG | + | chr4_1:59014582-59014601 | None:intergenic | 50.0% | |
| GCGTGGATACTTTCGGTTGA+AGG | - | chr4_1:59014858-59014877 | Msa0559830:intron | 50.0% | |
| AGGATTCAGCAGGCTCTTCT+TGG | + | chr4_1:59015583-59015602 | None:intergenic | 50.0% | |
| AAGAAGAGCCTGCTGAATCC+TGG | - | chr4_1:59015582-59015601 | Msa0559830:intron | 50.0% | |
| AGAAGAGCCTGCTGAATCCT+GGG | - | chr4_1:59015583-59015602 | Msa0559830:intron | 50.0% | |
| TGCTGATCGCACTGTCCTTA+AGG | + | chr4_1:59015636-59015655 | None:intergenic | 50.0% | |
| GCACGCCTCAGGTTATATAC+CGG | - | chr4_1:59015653-59015672 | Msa0559830:intron | 50.0% | |
| !! | CGGTGGTGGATCTGAGAATT+AGG | + | chr4_1:59015920-59015939 | None:intergenic | 50.0% |
| GGAGTGACGTGTTCCAATCA+AGG | - | chr4_1:59016032-59016051 | Msa0559830:intron | 50.0% | |
| GGGAACCCAACCTTTGTGAT+TGG | - | chr4_1:59018007-59018026 | Msa0559830:intron | 50.0% | |
| GCACTTCTCACACACACCAT+AGG | + | chr4_1:59018134-59018153 | None:intergenic | 50.0% | |
| AAATAATCCAGGCACGCGCA+TGG | - | chr4_1:59018319-59018338 | Msa0559830:intron | 50.0% | |
| AGGATTCAGCAGGCTCTTCT+TGG | + | chr4_1:59015583-59015602 | None:intergenic | 50.0% | |
| AAGAAGAGCCTGCTGAATCC+TGG | - | chr4_1:59015582-59015601 | Msa0559830:intron | 50.0% | |
| AGAAGAGCCTGCTGAATCCT+GGG | - | chr4_1:59015583-59015602 | Msa0559830:intron | 50.0% | |
| TGCTGATCGCACTGTCCTTA+AGG | + | chr4_1:59015636-59015655 | None:intergenic | 50.0% | |
| GCACGCCTCAGGTTATATAC+CGG | - | chr4_1:59015653-59015672 | Msa0559830:intron | 50.0% | |
| ATCTGGTTGCCCACGTCTTG+AGG | - | chr4_1:59013358-59013377 | Msa0559830:intron | 55.0% | |
| GATGAGAGGTTGAGAGGTGG+AGG | + | chr4_1:59014547-59014566 | None:intergenic | 55.0% | |
| GAGGAGGAGTTTCTCCGGAA+TGG | + | chr4_1:59014577-59014596 | None:intergenic | 55.0% | |
| GAAGAGCCTGCTGAATCCTG+GGG | - | chr4_1:59015584-59015603 | Msa0559830:intron | 55.0% | |
| AAGAGCCTGCTGAATCCTGG+GGG | - | chr4_1:59015585-59015604 | Msa0559830:intron | 55.0% | |
| CAAATCCCCCAGGATTCAGC+AGG | + | chr4_1:59015593-59015612 | None:intergenic | 55.0% | |
| CTCATAAGCGCAAATCCCCC+AGG | + | chr4_1:59015603-59015622 | None:intergenic | 55.0% | |
| CTGGGGGATTTGCGCTTATG+AGG | - | chr4_1:59015601-59015620 | Msa0559830:intron | 55.0% | |
| GGGGATTTGCGCTTATGAGG+CGG | - | chr4_1:59015604-59015623 | Msa0559830:intron | 55.0% | |
| GCCCCACTTGACACTCACAT+AGG | + | chr4_1:59018258-59018277 | None:intergenic | 55.0% | |
| GGGCCGCTTGTATGAGATCT+TGG | - | chr4_1:59018274-59018293 | Msa0559830:intron | 55.0% | |
| GAAGAGCCTGCTGAATCCTG+GGG | - | chr4_1:59015584-59015603 | Msa0559830:intron | 55.0% | |
| AAGAGCCTGCTGAATCCTGG+GGG | - | chr4_1:59015585-59015604 | Msa0559830:intron | 55.0% | |
| CAAATCCCCCAGGATTCAGC+AGG | + | chr4_1:59015593-59015612 | None:intergenic | 55.0% | |
| CTCATAAGCGCAAATCCCCC+AGG | + | chr4_1:59015603-59015622 | None:intergenic | 55.0% | |
| CTGGGGGATTTGCGCTTATG+AGG | - | chr4_1:59015601-59015620 | Msa0559830:intron | 55.0% | |
| GGGGATTTGCGCTTATGAGG+CGG | - | chr4_1:59015604-59015623 | Msa0559830:intron | 55.0% | |
| AGGAGGTTGGAAACTCGCGT+TGG | - | chr4_1:59020000-59020019 | Msa0559830:CDS | 55.0% | |
| GGAGGTTGGAAACTCGCGTT+GGG | - | chr4_1:59020001-59020020 | Msa0559830:CDS | 55.0% | |
| GTTGGAAACTCGCGTTGGGT+GGG | - | chr4_1:59020005-59020024 | Msa0559830:CDS | 55.0% | |
| AGACATGTCGGAGTCGTCGA+TGG | + | chr4_1:59020032-59020051 | None:intergenic | 55.0% | |
| AGGTTGAGAGGTGGAGGTGG+AGG | + | chr4_1:59014541-59014560 | None:intergenic | 60.0% | |
| GAGAGGTTGAGAGGTGGAGG+TGG | + | chr4_1:59014544-59014563 | None:intergenic | 60.0% | |
| ! | TTGTGGGGGTGTGATGCGAG+TGG | - | chr4_1:59018375-59018394 | Msa0559830:intron | 60.0% |
| GGTTGGAAACTCGCGTTGGG+TGG | - | chr4_1:59020004-59020023 | Msa0559830:CDS | 60.0% | |
| CAGTGCGATCAGCACGCCTC+AGG | - | chr4_1:59015642-59015661 | Msa0559830:intron | 65.0% | |
| GAATAGGCCATGCGCGTGCC+TGG | + | chr4_1:59018329-59018348 | None:intergenic | 65.0% | |
| TGGCGCTGTGGTGCGCGAAT+AGG | + | chr4_1:59018345-59018364 | None:intergenic | 65.0% | |
| CAGTGCGATCAGCACGCCTC+AGG | - | chr4_1:59015642-59015661 | Msa0559830:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 59012780 | 59020304 | 59012780 | ID=Msa0559830;Name=Msa0559830 |
| chr4_1 | mRNA | 59012780 | 59020304 | 59012780 | ID=Msa0559830-mRNA-1;Parent=Msa0559830;Name=Msa0559830-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|0.16|0.28|7|0|405 |
| chr4_1 | exon | 59020175 | 59020304 | 59020175 | ID=Msa0559830-mRNA-1:exon:18187;Parent=Msa0559830-mRNA-1 |
| chr4_1 | exon | 59019876 | 59020096 | 59019876 | ID=Msa0559830-mRNA-1:exon:18186;Parent=Msa0559830-mRNA-1 |
| chr4_1 | exon | 59019652 | 59019797 | 59019652 | ID=Msa0559830-mRNA-1:exon:18185;Parent=Msa0559830-mRNA-1 |
| chr4_1 | exon | 59019475 | 59019642 | 59019475 | ID=Msa0559830-mRNA-1:exon:18184;Parent=Msa0559830-mRNA-1 |
| chr4_1 | exon | 59019390 | 59019456 | 59019390 | ID=Msa0559830-mRNA-1:exon:18183;Parent=Msa0559830-mRNA-1 |
| chr4_1 | exon | 59019138 | 59019290 | 59019138 | ID=Msa0559830-mRNA-1:exon:18182;Parent=Msa0559830-mRNA-1 |
| chr4_1 | exon | 59012780 | 59013112 | 59012780 | ID=Msa0559830-mRNA-1:exon:18181;Parent=Msa0559830-mRNA-1 |
| chr4_1 | CDS | 59020175 | 59020304 | 59020175 | ID=Msa0559830-mRNA-1:cds;Parent=Msa0559830-mRNA-1 |
| chr4_1 | CDS | 59019876 | 59020096 | 59019876 | ID=Msa0559830-mRNA-1:cds;Parent=Msa0559830-mRNA-1 |
| chr4_1 | CDS | 59019652 | 59019797 | 59019652 | ID=Msa0559830-mRNA-1:cds;Parent=Msa0559830-mRNA-1 |
| chr4_1 | CDS | 59019475 | 59019642 | 59019475 | ID=Msa0559830-mRNA-1:cds;Parent=Msa0559830-mRNA-1 |
| chr4_1 | CDS | 59019390 | 59019456 | 59019390 | ID=Msa0559830-mRNA-1:cds;Parent=Msa0559830-mRNA-1 |
| chr4_1 | CDS | 59019138 | 59019290 | 59019138 | ID=Msa0559830-mRNA-1:cds;Parent=Msa0559830-mRNA-1 |
| chr4_1 | CDS | 59012780 | 59013112 | 59012780 | ID=Msa0559830-mRNA-1:cds;Parent=Msa0559830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
