AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0564740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0564740 MtrunA17_Chr8g0377301 98.750 160 2 0 2 161 14 173 8.59e-118 330
Msa0564740 MtrunA17_Chr3g0122641 95.000 160 8 0 2 161 14 173 3.86e-115 323
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0564740 AT1G27400.1 87.500 160 20 0 2 161 14 173 2.15e-105 299
Msa0564740 AT1G67430.1 86.875 160 21 0 2 161 14 173 4.57e-105 298
Msa0564740 AT1G67430.2 61.875 160 17 1 2 161 14 129 5.04e-62 187

Find 54 sgRNAs with CRISPR-Local

Find 870 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTAGAGTGTCTATTCT+TGG 0.210303 4_1:-65470295 None:intergenic
TCTTCTTGCTTGCTGCCAAC+TGG 0.224595 4_1:-65470875 None:intergenic
ATCATTAAATAGATATTTCT+TGG 0.256668 4_1:+65471111 Msa0564740:three_prime_UTR
TATTGCTGCCTTGTACTCTT+AGG 0.257568 4_1:+65470920 Msa0564740:three_prime_UTR
TGCCCTTGACCAAGGCTAAA+AGG 0.311470 4_1:+65470193 Msa0564740:CDS
TATAAAATAGAACATAGTTT+TGG 0.317872 4_1:-65470995 None:intergenic
TAGAGTGTCTATTCTTGGCC+TGG 0.328430 4_1:-65470290 None:intergenic
GACGTTTCTGTCGTGGTGTT+GGG 0.366723 4_1:+65470259 Msa0564740:CDS
TACTTTCTAGGTCAAAGGTT+TGG 0.377018 4_1:+65470482 Msa0564740:intron
CTTCTTGCTTGCTGCCAACT+GGG 0.392921 4_1:-65470874 None:intergenic
CTTGCTGCCAACTGGGACTC+CGG 0.394551 4_1:-65470867 None:intergenic
GCTTCTGTGCTTGATTGACT+TGG 0.407265 4_1:-65470533 None:intergenic
AGAGTGTCTATTCTTGGCCT+GGG 0.411697 4_1:-65470289 None:intergenic
ATAAACTTTGCTGACTTGAC+TGG 0.421082 4_1:-65470330 None:intergenic
AGACGTTTCTGTCGTGGTGT+TGG 0.422500 4_1:+65470258 Msa0564740:CDS
GGGAAACCGCCTTTGCCATC+AGG 0.436420 4_1:+65470166 Msa0564740:CDS
AGACGTTCTTGCACACAAAC+AGG 0.445626 4_1:+65470224 Msa0564740:CDS
GAGGTCAGCACCACGAGCCT+TGG 0.456110 4_1:-65467222 None:intergenic
GTCAGCACCACGAGCCTTGG+TGG 0.461811 4_1:-65467219 None:intergenic
TGGTGTTGGGAGGACAGCCC+AGG 0.463667 4_1:+65470272 Msa0564740:CDS
CAAGTCAGCAAAGTTTATCC+TGG 0.469769 4_1:+65470335 Msa0564740:CDS
GCCAAGAATAGACACTCTAA+TGG 0.473513 4_1:+65470294 Msa0564740:CDS
AATTGTACTTGCAGAACACT+AGG 0.474152 4_1:+65470145 Msa0564740:intron
AATTGTCAAACATGATTCTC+CGG 0.475762 4_1:+65471066 Msa0564740:three_prime_UTR
AAGAAGAGGGCTTAAACTCT+AGG 0.479337 4_1:+65470891 Msa0564740:exon
CCATTCAGACGTTTCTGTCG+TGG 0.491424 4_1:+65470252 Msa0564740:CDS
TGACCTCAGAGTTCATTTCA+AGG 0.493325 4_1:+65467238 Msa0564740:CDS
CCACGACAGAAACGTCTGAA+TGG 0.493513 4_1:-65470252 None:intergenic
ATTACTACTTTCTAGGTCAA+AGG 0.496618 4_1:+65470477 Msa0564740:intron
GACCAAGGCTAAAAGGTACT+TGG 0.501746 4_1:+65470200 Msa0564740:CDS
GGAAGAGGCAGTTCAGAAAG+AGG 0.522419 4_1:+65470744 Msa0564740:CDS
ACATACGGTTGATTCTTCCA+TGG 0.528331 4_1:-65470578 None:intergenic
CTGCATTCTTCAGCAAATCC+AGG 0.531822 4_1:-65470353 None:intergenic
ATTAAATAGATATTTCTTGG+TGG 0.542034 4_1:+65471114 Msa0564740:three_prime_UTR
CATACGGTTGATTCTTCCAT+GGG 0.548316 4_1:-65470577 None:intergenic
CGCAGAACATACAGAGCCCA+TGG 0.557011 4_1:+65470561 Msa0564740:CDS
GTTGGCAGCAAGCAAGAAGA+GGG 0.565267 4_1:+65470878 Msa0564740:CDS
GGGCAACTTCCTGATGGCAA+AGG 0.587242 4_1:-65470175 None:intergenic
TGACAAGACCTAAGAGTACA+AGG 0.589889 4_1:-65470928 None:intergenic
GGTCAAGGGCAACTTCCTGA+TGG 0.590928 4_1:-65470181 None:intergenic
CAACTTCCTGATGGCAAAGG+CGG 0.594171 4_1:-65470172 None:intergenic
AGTTGGCAGCAAGCAAGAAG+AGG 0.597913 4_1:+65470877 Msa0564740:CDS
ATTGTACTTGCAGAACACTA+GGG 0.598625 4_1:+65470146 Msa0564740:intron
GTTTCTGTCGTGGTGTTGGG+AGG 0.609236 4_1:+65470262 Msa0564740:CDS
AAAATCAACTCAATGTGGCA+AGG 0.612514 4_1:-65470712 None:intergenic
TTTCCAGCCGGAGTCCCAGT+TGG 0.613767 4_1:+65470860 Msa0564740:intron
ACAGAAACGTCTGAATGGAA+TGG 0.621533 4_1:-65470247 None:intergenic
CAGATAAAATCAACTCAATG+TGG 0.623662 4_1:-65470717 None:intergenic
CAGGAAGTTGCCCTTGACCA+AGG 0.624452 4_1:+65470185 Msa0564740:CDS
GACACTCTAATGGACAAGGA+AGG 0.649233 4_1:+65470304 Msa0564740:CDS
TTACCTTGAAATGAACTCTG+AGG 0.651324 4_1:-65467241 None:intergenic
ACTCTAATGGACAAGGAAGG+TGG 0.651493 4_1:+65470307 Msa0564740:CDS
TATGCAGCCACCAAGGCTCG+TGG 0.654672 4_1:+65467212 Msa0564740:intron
AATAGACACTCTAATGGACA+AGG 0.667364 4_1:+65470300 Msa0564740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGACAAATAAAAAAT+GGG - chr4_1:65464562-65464581 None:intergenic 10.0%
!!! TGTTTTATTATTATAGATTA+TGG + chr4_1:65469182-65469201 Msa0564740:intron 10.0%
!! ATCATTAATAAAACATAATT+GGG - chr4_1:65470050-65470069 None:intergenic 10.0%
!! AATCATTAATAAAACATAAT+TGG - chr4_1:65470051-65470070 None:intergenic 10.0%
!! TTCATAAAAAAATCATATAA+AGG - chr4_1:65470106-65470125 None:intergenic 10.0%
!! AGAATTTGAAAAATTAAATG+AGG + chr4_1:65463404-65463423 Msa0564740:intron 15.0%
!! CAAAAAAGACAAATAAAAAA+TGG - chr4_1:65464563-65464582 None:intergenic 15.0%
!! GTAATAAAATATATACTAGT+TGG + chr4_1:65466870-65466889 Msa0564740:intron 15.0%
!!! ATATTTTAAGTACTTGAAAT+TGG + chr4_1:65466913-65466932 Msa0564740:intron 15.0%
!!! CATGTTTAAGTATTTTTAAT+TGG + chr4_1:65466972-65466991 Msa0564740:intron 15.0%
!!! ATTTTATAAGGTAATAGATA+AGG + chr4_1:65467510-65467529 Msa0564740:intron 15.0%
!! TATATTAATTGAAATGAATG+AGG - chr4_1:65468362-65468381 None:intergenic 15.0%
!!! ATTTAGTTTATAGATGAAAA+AGG + chr4_1:65469220-65469239 Msa0564740:intron 15.0%
!!! TAATAACCATGATTTTTTTA+AGG + chr4_1:65469292-65469311 Msa0564740:intron 15.0%
!!! ATATAAAACTCATTGTTATT+GGG + chr4_1:65469488-65469507 Msa0564740:intron 15.0%
!! TATATAATCAAGTAATAATG+AGG - chr4_1:65469735-65469754 None:intergenic 15.0%
!!! TTAATTGATTATATTTGTTG+TGG + chr4_1:65470621-65470640 Msa0564740:intron 15.0%
!! TATTGCTTATTTAATTGTTT+CGG + chr4_1:65470795-65470814 Msa0564740:intron 15.0%
!!! TATAAAATAGAACATAGTTT+TGG - chr4_1:65470998-65471017 None:intergenic 15.0%
!!! TCTATTTAATGATTTTATCA+CGG - chr4_1:65471104-65471123 None:intergenic 15.0%
!! ATCATTAAATAGATATTTCT+TGG + chr4_1:65471111-65471130 Msa0564740:three_prime_UTR 15.0%
!! AAACATCAAATAAAAAGGAA+TGG - chr4_1:65462089-65462108 None:intergenic 20.0%
!! AGCTAAAACATCAAATAAAA+AGG - chr4_1:65462084-65462103 None:intergenic 20.0%
!! AATGAAAATAGTTGTAGATT+TGG + chr4_1:65461756-65461775 Msa0564740:intron 20.0%
!!! ACAATTTTTAAATGAGACTT+AGG + chr4_1:65461901-65461920 Msa0564740:intron 20.0%
!!! CAATTTTTAAATGAGACTTA+GGG + chr4_1:65461902-65461921 Msa0564740:intron 20.0%
!! TTATCACAATTGTCAAAAAT+TGG - chr4_1:65461967-65461986 None:intergenic 20.0%
!!! ATTTGATGTTTTAGAATTGT+TGG - chr4_1:65462044-65462063 None:intergenic 20.0%
!! AGCTAAAACATCAAATAAAA+AGG + chr4_1:65462084-65462103 Msa0564740:intron 20.0%
!! AAACATCAAATAAAAAGGAA+TGG + chr4_1:65462089-65462108 Msa0564740:intron 20.0%
!! AAAAACAGAAACAACATTAA+TGG - chr4_1:65462201-65462220 None:intergenic 20.0%
!!! TTAATGTTGTTTCTGTTTTT+TGG + chr4_1:65462201-65462220 Msa0564740:intron 20.0%
!!! TTGGAGAAAAAATTTAAAGT+TGG + chr4_1:65462226-65462245 Msa0564740:intron 20.0%
!!! AGTTAACAAAGTTTAGAATT+GGG - chr4_1:65462253-65462272 None:intergenic 20.0%
!!! AAGTTAACAAAGTTTAGAAT+TGG - chr4_1:65462254-65462273 None:intergenic 20.0%
!! CAAAAATTATTAAAGCGAAA+AGG - chr4_1:65462871-65462890 None:intergenic 20.0%
!!! CTTTTCGCTTTAATAATTTT+TGG + chr4_1:65462869-65462888 Msa0564740:intron 20.0%
!!! TTCAACATCAAGATTTTAAA+AGG + chr4_1:65462893-65462912 Msa0564740:intron 20.0%
!!! TCAACATCAAGATTTTAAAA+GGG + chr4_1:65462894-65462913 Msa0564740:intron 20.0%
!! AAATTAAATGAGGATGATAA+TGG + chr4_1:65463414-65463433 Msa0564740:intron 20.0%
!!! TTGCTTTTATCAAAGAATTT+TGG + chr4_1:65463529-65463548 Msa0564740:intron 20.0%
!! TCTTTATAAATTACTAGCTA+AGG + chr4_1:65463707-65463726 Msa0564740:intron 20.0%
!!! TAATTTTTTGAATTGTAGTG+AGG + chr4_1:65464366-65464385 Msa0564740:intron 20.0%
!!! AATTTTTTGAATTGTAGTGA+GGG + chr4_1:65464367-65464386 Msa0564740:intron 20.0%
!!! AGATTCAAAGAGAATTTTTA+TGG + chr4_1:65464617-65464636 Msa0564740:intron 20.0%
!!! GATTCAAAGAGAATTTTTAT+GGG + chr4_1:65464618-65464637 Msa0564740:intron 20.0%
!!! ATTCAAAGAGAATTTTTATG+GGG + chr4_1:65464619-65464638 Msa0564740:intron 20.0%
!! TTTGTCAAAGTAAAAGAAAT+GGG + chr4_1:65464689-65464708 Msa0564740:intron 20.0%
!! AGAAAAAAAATTACAACAAG+GGG - chr4_1:65466402-65466421 None:intergenic 20.0%
!! GAGAAAAAAAATTACAACAA+GGG - chr4_1:65466403-65466422 None:intergenic 20.0%
!!! TGAATTTTTTTTCTCGAAAA+TGG - chr4_1:65466538-65466557 None:intergenic 20.0%
!!! ATATTTTCCGAATGAAATTT+TGG + chr4_1:65466583-65466602 Msa0564740:intron 20.0%
!! TCAATTTCCAAAATTTCATT+CGG - chr4_1:65466593-65466612 None:intergenic 20.0%
!!! GAAATTTTGGAAATTGAAAA+TGG + chr4_1:65466596-65466615 Msa0564740:intron 20.0%
!! AACTAATTCAACAAAAAATG+AGG + chr4_1:65466625-65466644 Msa0564740:intron 20.0%
!!! TATATTCAAATTGACTCAAA+AGG + chr4_1:65466649-65466668 Msa0564740:intron 20.0%
!!! ATATTCAAATTGACTCAAAA+GGG + chr4_1:65466650-65466669 Msa0564740:intron 20.0%
!!! TTATTACTTCTTTTAAACGT+GGG - chr4_1:65466857-65466876 None:intergenic 20.0%
!!! TTTATTACTTCTTTTAAACG+TGG - chr4_1:65466858-65466877 None:intergenic 20.0%
!!! ATATTACTTCTTTTACAAGT+GGG - chr4_1:65466897-65466916 None:intergenic 20.0%
!!! AATATTACTTCTTTTACAAG+TGG - chr4_1:65466898-65466917 None:intergenic 20.0%
!! TACAACAAAAAATGAGTATT+AGG - chr4_1:65467329-65467348 None:intergenic 20.0%
!! AGAAATGTAGTTTGAAAATT+TGG + chr4_1:65467630-65467649 Msa0564740:intron 20.0%
!!! TAAAACTTTTCTATGTAATG+GGG - chr4_1:65467808-65467827 None:intergenic 20.0%
!!! CTAAAACTTTTCTATGTAAT+GGG - chr4_1:65467809-65467828 None:intergenic 20.0%
!!! ACTAAAACTTTTCTATGTAA+TGG - chr4_1:65467810-65467829 None:intergenic 20.0%
!! TACTAATTATTGATCATTGA+TGG + chr4_1:65468258-65468277 Msa0564740:intron 20.0%
!! TTGAAGTTAATTGATATACT+TGG + chr4_1:65468384-65468403 Msa0564740:intron 20.0%
!!! ATATAAAACCCATTGTTATT+GGG + chr4_1:65468481-65468500 Msa0564740:intron 20.0%
!! GAAACCTATAATCATAAAAA+GGG - chr4_1:65468682-65468701 None:intergenic 20.0%
!! TGAAACCTATAATCATAAAA+AGG - chr4_1:65468683-65468702 None:intergenic 20.0%
!! ATGATTATAGGTTTCATAAA+TGG + chr4_1:65468687-65468706 Msa0564740:intron 20.0%
!!! ATATATAACCCATTGTTATT+GGG + chr4_1:65469091-65469110 Msa0564740:intron 20.0%
!! AGAACCTTAAATCATAAAAA+GGG - chr4_1:65469327-65469346 None:intergenic 20.0%
!! GATATAAAACTCATTGTTAT+TGG + chr4_1:65469487-65469506 Msa0564740:intron 20.0%
!! TACTTGATTATATAAGACAT+AGG + chr4_1:65469741-65469760 Msa0564740:intron 20.0%
!! TGAGCATTAAAAAAAAAAAG+AGG - chr4_1:65470446-65470465 None:intergenic 20.0%
!! AACATTAATTACTACTTTCT+AGG + chr4_1:65470470-65470489 Msa0564740:intron 20.0%
!!! ATCATAAGATTTGAAACATA+CGG - chr4_1:65470596-65470615 None:intergenic 20.0%
!!! GTTCTATTTTATACTGAATT+TGG + chr4_1:65471005-65471024 Msa0564740:three_prime_UTR 20.0%
!! ATTAAATAGATATTTCTTGG+TGG + chr4_1:65471114-65471133 Msa0564740:three_prime_UTR 20.0%
! ATCAAATAAAAAGGAATGGA+GGG - chr4_1:65462093-65462112 None:intergenic 25.0%
!!! ACTACAATACCCTTATTTTT+TGG + chr4_1:65461779-65461798 Msa0564740:intron 25.0%
!!! ATTTTGAGAAGAAAAAAGCA+AGG - chr4_1:65461819-65461838 None:intergenic 25.0%
! TCCAAATCTTCTTAAATGAA+CGG + chr4_1:65461839-65461858 Msa0564740:intron 25.0%
! TAACGTAATTAATTGTGACA+AGG + chr4_1:65461998-65462017 Msa0564740:intron 25.0%
! AACGTAATTAATTGTGACAA+GGG + chr4_1:65461999-65462018 Msa0564740:intron 25.0%
! ATCAAATAAAAAGGAATGGA+GGG + chr4_1:65462093-65462112 Msa0564740:intron 25.0%
! AGTACTATGCTATATAAAAG+AGG + chr4_1:65462116-65462135 Msa0564740:intron 25.0%
!! GTTAACAAAGTTTAGAATTG+GGG - chr4_1:65462252-65462271 None:intergenic 25.0%
!!! ACTATTCTTATTTTTTGCTC+TGG - chr4_1:65462290-65462309 None:intergenic 25.0%
!! TTACTCAAAATGTGATTTGT+CGG + chr4_1:65462459-65462478 Msa0564740:intron 25.0%
! GCTCTTAAAACTATCATTAA+GGG + chr4_1:65462988-65463007 Msa0564740:intron 25.0%
! CTCTTAAAACTATCATTAAG+GGG + chr4_1:65462989-65463008 Msa0564740:intron 25.0%
!!! ATAAAAAGCATCGATGAAAA+GGG + chr4_1:65463069-65463088 Msa0564740:intron 25.0%
! AGATCTCATTAGCATAAAAT+TGG - chr4_1:65463590-65463609 None:intergenic 25.0%
! TTTAGACCAATATCTTTACT+AGG + chr4_1:65463681-65463700 Msa0564740:intron 25.0%
! TAAATTACTAGCTAAGGTAT+TGG + chr4_1:65463713-65463732 Msa0564740:intron 25.0%
!! TATTATTTCTCCTTCTCAAT+CGG + chr4_1:65463764-65463783 Msa0564740:intron 25.0%
!!! ATTTTTGTTTTTGTTGGTAG+CGG + chr4_1:65464085-65464104 Msa0564740:intron 25.0%
!!! ATTTTTTGAATTGTAGTGAG+GGG + chr4_1:65464368-65464387 Msa0564740:intron 25.0%
!! GGTCATAAATATATTAGCTT+TGG + chr4_1:65464496-65464515 Msa0564740:intron 25.0%
!!! CATAAATATATTAGCTTTGG+AGG + chr4_1:65464499-65464518 Msa0564740:intron 25.0%
! TAGAATTGTTCTCTTGAATT+CGG + chr4_1:65464522-65464541 Msa0564740:intron 25.0%
! GTTTGTCAAAGTAAAAGAAA+TGG + chr4_1:65464688-65464707 Msa0564740:intron 25.0%
! TTGTCAAAGTAAAAGAAATG+GGG + chr4_1:65464690-65464709 Msa0564740:intron 25.0%
!!! ATAGGCTTAATTCTAGTTTT+TGG + chr4_1:65464968-65464987 Msa0564740:intron 25.0%
!!! TAGGCTTAATTCTAGTTTTT+GGG + chr4_1:65464969-65464988 Msa0564740:intron 25.0%
! TGAATAATTAAGAGGATAAG+TGG + chr4_1:65465196-65465215 Msa0564740:intron 25.0%
! CAACATCACAATGTATAAAA+AGG - chr4_1:65465500-65465519 None:intergenic 25.0%
! GGAGAAAAAAAATTACAACA+AGG - chr4_1:65466404-65466423 None:intergenic 25.0%
!! GTTAGAAGACTTTTCAATTT+GGG + chr4_1:65466697-65466716 Msa0564740:intron 25.0%
!!! TTTTCTTAGAGCATTTTCAA+TGG + chr4_1:65466720-65466739 Msa0564740:intron 25.0%
!!! TTTCTTAGAGCATTTTCAAT+GGG + chr4_1:65466721-65466740 Msa0564740:intron 25.0%
! GAAGTAATTCTTGTTAATGA+AGG - chr4_1:65466749-65466768 None:intergenic 25.0%
!!! TTTTTTCTTTCTCCAATGAA+AGG - chr4_1:65466782-65466801 None:intergenic 25.0%
! TAAGACTTATCTAAGTTAGT+GGG + chr4_1:65466948-65466967 Msa0564740:intron 25.0%
!!! TATTGTGTTTTAAGCCTAAT+TGG + chr4_1:65467134-65467153 Msa0564740:intron 25.0%
! TTCATCTCAAAAAACCAATT+AGG - chr4_1:65467151-65467170 None:intergenic 25.0%
! AACAAAATTGACAATGACTA+GGG - chr4_1:65467548-65467567 None:intergenic 25.0%
!! TAGTCATTGTCAATTTTGTT+GGG + chr4_1:65467548-65467567 Msa0564740:intron 25.0%
! ATGTAGTTTGAAAATTTGGA+AGG + chr4_1:65467634-65467653 Msa0564740:intron 25.0%
! TTGAAAATTTGGAAGGAAAA+AGG + chr4_1:65467641-65467660 Msa0564740:intron 25.0%
! CAATAGATATAGTGAAAACT+TGG + chr4_1:65467850-65467869 Msa0564740:intron 25.0%
!! ATGTTATTTGAATGACAAAC+TGG - chr4_1:65467946-65467965 None:intergenic 25.0%
!!! GGTTTTCTCTATATTTTAAC+TGG - chr4_1:65468033-65468052 None:intergenic 25.0%
! TGAACCTTAAATCATTACAT+GGG - chr4_1:65468188-65468207 None:intergenic 25.0%
!! ATTTAAGGTTCACTAAATGA+GGG + chr4_1:65468196-65468215 Msa0564740:intron 25.0%
! CCAAACAATCTAAGTAATAA+GGG - chr4_1:65468327-65468346 None:intergenic 25.0%
! ACCAAACAATCTAAGTAATA+AGG - chr4_1:65468328-65468347 None:intergenic 25.0%
! GATATAAAACCCATTGTTAT+TGG + chr4_1:65468480-65468499 Msa0564740:intron 25.0%
!! AGTTCCCTTTTTATGATTAT+AGG + chr4_1:65468675-65468694 Msa0564740:intron 25.0%
! GATATATAACCCATTGTTAT+TGG + chr4_1:65469090-65469109 Msa0564740:intron 25.0%
! CAGAACCTTAAATCATAAAA+AGG - chr4_1:65469328-65469347 None:intergenic 25.0%
!! TTTTATATCCCTGAATGTTA+CGG - chr4_1:65469476-65469495 None:intergenic 25.0%
! GTTGACATGTATTCAATTAT+TGG + chr4_1:65469637-65469656 Msa0564740:intron 25.0%
! ATGTAATATTGAACTGGAAA+AGG - chr4_1:65469782-65469801 None:intergenic 25.0%
!! TTTTCCAGTTCAATATTACA+TGG + chr4_1:65469781-65469800 Msa0564740:intron 25.0%
!! TTTTCCATGTAATATTGAAC+TGG - chr4_1:65469788-65469807 None:intergenic 25.0%
! CTCTCTAAACAATTATTGTT+TGG + chr4_1:65470002-65470021 Msa0564740:intron 25.0%
!!! TGAGTTGATTTTATCTGAAA+AGG + chr4_1:65470723-65470742 Msa0564740:CDS 25.0%
CATCAAATAAAAAGGAATGG+AGG - chr4_1:65462092-65462111 None:intergenic 30.0%
AGCTGATTACACACATATTA+AGG + chr4_1:65461722-65461741 Msa0564740:intron 30.0%
AAAAAAGCAAGGAGTAATCA+TGG - chr4_1:65461808-65461827 None:intergenic 30.0%
ACCGTTCATTTAAGAAGATT+TGG - chr4_1:65461843-65461862 None:intergenic 30.0%
AAATCTTCTTAAATGAACGG+TGG + chr4_1:65461842-65461861 Msa0564740:intron 30.0%
AATCTTCTTAAATGAACGGT+GGG + chr4_1:65461843-65461862 Msa0564740:intron 30.0%
AATTGTGACAAGGGTAAAAT+TGG + chr4_1:65462008-65462027 Msa0564740:intron 30.0%
CATCAAATAAAAAGGAATGG+AGG + chr4_1:65462092-65462111 Msa0564740:intron 30.0%
!! CATTCTTGGAGATTTTAATG+CGG + chr4_1:65462546-65462565 Msa0564740:intron 30.0%
!! ATTTTAATGCGGTTTGTAGA+AGG + chr4_1:65462557-65462576 Msa0564740:intron 30.0%
! TTTTAATGCGGTTTGTAGAA+GGG + chr4_1:65462558-65462577 Msa0564740:intron 30.0%
!! TTCCTTTTTAACTCCTTTCT+AGG + chr4_1:65462634-65462653 Msa0564740:intron 30.0%
TTAAAAATGGTGGTTGGAAT+TGG + chr4_1:65462836-65462855 Msa0564740:intron 30.0%
TAAAAATGGTGGTTGGAATT+GGG + chr4_1:65462837-65462856 Msa0564740:intron 30.0%
!! ACATCAAGATTTTAAAAGGG+TGG + chr4_1:65462897-65462916 Msa0564740:intron 30.0%
CGTTCTTAAAGAGAAATTGA+AGG + chr4_1:65462966-65462985 Msa0564740:intron 30.0%
GGCTCTTAAAACTATCATTA+AGG + chr4_1:65462987-65463006 Msa0564740:intron 30.0%
TTAAAACTATCATTAAGGGG+TGG + chr4_1:65462992-65463011 Msa0564740:intron 30.0%
!! GATAAAAAGCATCGATGAAA+AGG + chr4_1:65463068-65463087 Msa0564740:intron 30.0%
!! TAAAAAGCATCGATGAAAAG+GGG + chr4_1:65463070-65463089 Msa0564740:intron 30.0%
TCCACAAATGTATCAAGTTA+CGG + chr4_1:65463241-65463260 Msa0564740:intron 30.0%
!!! TGAGGATGATAATGGTATTT+TGG + chr4_1:65463422-65463441 Msa0564740:intron 30.0%
AAAGCAAAGTTAAAGTCATC+CGG - chr4_1:65463516-65463535 None:intergenic 30.0%
TTGGTACTTGATTAAGAATG+AGG + chr4_1:65463548-65463567 Msa0564740:intron 30.0%
AAGAAAACCAACATACCTTT+CGG - chr4_1:65463615-65463634 None:intergenic 30.0%
CTAAAATCATTCAACTCCAA+CGG - chr4_1:65463666-65463685 None:intergenic 30.0%
AGACTTCCTAGTAAAGATAT+TGG - chr4_1:65463690-65463709 None:intergenic 30.0%
! CAAAGAATGTCTCATTTTCA+AGG + chr4_1:65463863-65463882 Msa0564740:intron 30.0%
!!! TTTTGGAGTATATGATGAGA+AGG + chr4_1:65463925-65463944 Msa0564740:intron 30.0%
! TTTGGAGTATATGATGAGAA+GGG + chr4_1:65463926-65463945 Msa0564740:intron 30.0%
AAAAACAAAAATGGAGCAAG+CGG - chr4_1:65464077-65464096 None:intergenic 30.0%
!!! TGCTCCATTTTTGTTTTTGT+TGG + chr4_1:65464079-65464098 Msa0564740:intron 30.0%
GCTACCAACAAAAACAAAAA+TGG - chr4_1:65464086-65464105 None:intergenic 30.0%
AGCCAACAGTTAATAATCTT+TGG + chr4_1:65464230-65464249 Msa0564740:intron 30.0%
GCCAACAGTTAATAATCTTT+GGG + chr4_1:65464231-65464250 Msa0564740:intron 30.0%
! TTCTTTAAAAGCTCGTTGAT+AGG + chr4_1:65464307-65464326 Msa0564740:intron 30.0%
! TCTTTAAAAGCTCGTTGATA+GGG + chr4_1:65464308-65464327 Msa0564740:intron 30.0%
TTAGTGGGAAGTTAAATTCA+TGG + chr4_1:65464473-65464492 Msa0564740:intron 30.0%
TAGTGGGAAGTTAAATTCAT+GGG + chr4_1:65464474-65464493 Msa0564740:intron 30.0%
!!! TTTGTCTTTTTTGAAGCTTC+CGG + chr4_1:65464570-65464589 Msa0564740:intron 30.0%
TGTCAAAGTAAAAGAAATGG+GGG + chr4_1:65464691-65464710 Msa0564740:intron 30.0%
AAAGACTAACATTCATCACT+CGG - chr4_1:65464735-65464754 None:intergenic 30.0%
!!! AGTGATGAATGTTAGTCTTT+TGG + chr4_1:65464735-65464754 Msa0564740:intron 30.0%
TTTATGGAAAGATGTGTTGT+TGG + chr4_1:65464795-65464814 Msa0564740:intron 30.0%
!! CTAACTAAGATTGGTGATTT+TGG + chr4_1:65464901-65464920 Msa0564740:intron 30.0%
!! GTGATTTTGGTGAACTTAAT+TGG + chr4_1:65464914-65464933 Msa0564740:intron 30.0%
! AACTTAATTGGTTCAACTCT+GGG + chr4_1:65464926-65464945 Msa0564740:intron 30.0%
!!! CTAGTTTTTGGGATGATAAT+TGG + chr4_1:65464980-65464999 Msa0564740:intron 30.0%
! GAGAAGACATCTTTTTATGT+GGG + chr4_1:65465125-65465144 Msa0564740:intron 30.0%
!!! AGAAGATTCTGGAACTTTTT+CGG + chr4_1:65465230-65465249 Msa0564740:intron 30.0%
TCCGAATCTCTTTATTCATT+GGG + chr4_1:65465575-65465594 Msa0564740:intron 30.0%
TCCCAATGAATAAAGAGATT+CGG - chr4_1:65465579-65465598 None:intergenic 30.0%
TAGAGATAAGAAGGTCAAAA+AGG + chr4_1:65465617-65465636 Msa0564740:intron 30.0%
AGAGATAAGAAGGTCAAAAA+GGG + chr4_1:65465618-65465637 Msa0564740:intron 30.0%
TTATTTGGCTAGCAACAATT+TGG + chr4_1:65465649-65465668 Msa0564740:intron 30.0%
TATTTGGCTAGCAACAATTT+GGG + chr4_1:65465650-65465669 Msa0564740:intron 30.0%
!!! TTTCAACGATGCTATTTTTG+AGG + chr4_1:65465701-65465720 Msa0564740:intron 30.0%
!!! TTCTGTTTTGGCATATGTAT+AGG + chr4_1:65466217-65466236 Msa0564740:intron 30.0%
!!! TTGTTTTGGGTGGTTTTTTA+AGG + chr4_1:65466337-65466356 Msa0564740:intron 30.0%
!! TGTTTTGGGTGGTTTTTTAA+GGG + chr4_1:65466338-65466357 Msa0564740:intron 30.0%
AAATTACAACAAGGGGAAAT+CGG - chr4_1:65466395-65466414 None:intergenic 30.0%
TTCTCGAAAATGGAAAATTC+TGG - chr4_1:65466528-65466547 None:intergenic 30.0%
CATTAAACCTCTTACTTCTT+GGG - chr4_1:65466677-65466696 None:intergenic 30.0%
! GGTTAGAAGACTTTTCAATT+TGG + chr4_1:65466696-65466715 Msa0564740:intron 30.0%
!! TTCTTAGAGCATTTTCAATG+GGG + chr4_1:65466722-65466741 Msa0564740:intron 30.0%
GTAAGACTTATCTAAGTTAG+TGG + chr4_1:65466947-65466966 Msa0564740:intron 30.0%
TTAGGTAACACAAATTGAAC+TGG - chr4_1:65467311-65467330 None:intergenic 30.0%
GAACTTATGTATTTCTCTGA+TGG + chr4_1:65467374-65467393 Msa0564740:intron 30.0%
AAGCTAAAAACAAGCTTGTA+AGG + chr4_1:65467411-65467430 Msa0564740:intron 30.0%
AATAGATAAGGCAATCCAAA+CGG + chr4_1:65467522-65467541 Msa0564740:intron 30.0%
CAACAAAATTGACAATGACT+AGG - chr4_1:65467549-65467568 None:intergenic 30.0%
! CTAGTCATTGTCAATTTTGT+TGG + chr4_1:65467547-65467566 Msa0564740:intron 30.0%
!! TTGTTGTTTATGTTGTACTG+AGG + chr4_1:65467916-65467935 Msa0564740:intron 30.0%
GAAACTAGTGTCTAATAGAT+GGG - chr4_1:65468054-65468073 None:intergenic 30.0%
! CATCTATTAGACACTAGTTT+CGG + chr4_1:65468053-65468072 Msa0564740:intron 30.0%
AGGTCTATTCACAAAATAAC+AGG - chr4_1:65468114-65468133 None:intergenic 30.0%
! AGATAATAGCCATGGTTTTT+GGG + chr4_1:65468150-65468169 Msa0564740:intron 30.0%
AACTCCCATGTAATGATTTA+AGG + chr4_1:65468181-65468200 Msa0564740:intron 30.0%
GTGAACCTTAAATCATTACA+TGG - chr4_1:65468189-65468208 None:intergenic 30.0%
! GATTTAAGGTTCACTAAATG+AGG + chr4_1:65468195-65468214 Msa0564740:intron 30.0%
TGTTTCATTTAGCATCTTAG+TGG + chr4_1:65468286-65468305 Msa0564740:intron 30.0%
CCCTTATTACTTAGATTGTT+TGG + chr4_1:65468324-65468343 Msa0564740:intron 30.0%
! TTTTATATCCCTGAAGGTTA+CGG - chr4_1:65468469-65468488 None:intergenic 30.0%
ATATCACAAAGACAAGACAT+AGG - chr4_1:65468511-65468530 None:intergenic 30.0%
AATGTACCTCGTTAAATTCA+GGG + chr4_1:65468648-65468667 Msa0564740:intron 30.0%
ACCTCATTACTTAGATTGTT+TGG + chr4_1:65468829-65468848 Msa0564740:intron 30.0%
ACCAAACAATCTAAGTAATG+AGG - chr4_1:65468833-65468852 None:intergenic 30.0%
ACCTCATTACTTAGATTGTT+TGG + chr4_1:65468829-65468848 Msa0564740:intron 30.0%
ACCAAACAATCTAAGTAATG+AGG - chr4_1:65468833-65468852 None:intergenic 30.0%
ATTGAAAAAAAGCAGTGGTT+TGG + chr4_1:65469033-65469052 Msa0564740:intron 30.0%
TTATATATCCCTGAAGGTTA+CGG - chr4_1:65469079-65469098 None:intergenic 30.0%
TTTATAGATGAAAAAGGCAG+TGG + chr4_1:65469226-65469245 Msa0564740:intron 30.0%
GGTTCACCTTAAAAAAATCA+TGG - chr4_1:65469301-65469320 None:intergenic 30.0%
CTTAAATCATAAAAAGGGAG+AGG - chr4_1:65469322-65469341 None:intergenic 30.0%
! CTCTCCCTTTTTATGATTTA+AGG + chr4_1:65469320-65469339 Msa0564740:intron 30.0%
TTTATATCCCTGAATGTTAC+GGG - chr4_1:65469475-65469494 None:intergenic 30.0%
ATTACATGGAAAAGACGTAT+AGG + chr4_1:65469795-65469814 Msa0564740:intron 30.0%
TCCTGATGTAAAAAGAAAAC+AGG + chr4_1:65469828-65469847 Msa0564740:intron 30.0%
! ACCTGTTTTCTTTTTACATC+AGG - chr4_1:65469832-65469851 None:intergenic 30.0%
!! ATGCATTCAAGAAGCATTAA+AGG + chr4_1:65469939-65469958 Msa0564740:intron 30.0%
ATTACTACTTTCTAGGTCAA+AGG + chr4_1:65470477-65470496 Msa0564740:intron 30.0%
!!! TGTGGTTTTTTTTGAAAGTG+TGG + chr4_1:65470639-65470658 Msa0564740:intron 30.0%
CAGATAAAATCAACTCAATG+TGG - chr4_1:65470720-65470739 None:intergenic 30.0%
! GATTTTATCTGAAAAGGAAG+AGG + chr4_1:65470729-65470748 Msa0564740:CDS 30.0%
! TAATTGTTTCGGCAAGATTT+TGG + chr4_1:65470806-65470825 Msa0564740:intron 30.0%
!!! ATTCTGATATTTTTTCCAGC+CGG + chr4_1:65470848-65470867 Msa0564740:intron 30.0%
AATTGTCAAACATGATTCTC+CGG + chr4_1:65471066-65471085 Msa0564740:three_prime_UTR 30.0%
TCATGGCAGCCAAAAAATAA+GGG - chr4_1:65461791-65461810 None:intergenic 35.0%
ATCATGGCAGCCAAAAAATA+AGG - chr4_1:65461792-65461811 None:intergenic 35.0%
ATTACCAATTGTCCTTACCT+AGG - chr4_1:65461937-65461956 None:intergenic 35.0%
CAAAGAAAGGATTACTGTCT+TGG - chr4_1:65462167-65462186 None:intergenic 35.0%
!!! TTGTTTCTGTTTTTTGGCGT+TGG + chr4_1:65462207-65462226 Msa0564740:intron 35.0%
AGAATAGTAAATCTTGTGCG+AGG + chr4_1:65462302-65462321 Msa0564740:intron 35.0%
CACCTAGAAAGGAGTTAAAA+AGG - chr4_1:65462639-65462658 None:intergenic 35.0%
TAACTCCTTTCTAGGTGATA+TGG + chr4_1:65462642-65462661 Msa0564740:intron 35.0%
TTGGAGGATTTAAATGTGGT+GGG + chr4_1:65462667-65462686 Msa0564740:intron 35.0%
GATTGATAGGATGCTTGTTT+CGG + chr4_1:65462735-65462754 Msa0564740:intron 35.0%
! TGTCTGTTGGTGCTTAAAAA+TGG + chr4_1:65462823-65462842 Msa0564740:intron 35.0%
AAAAATGGTGGTTGGAATTG+GGG + chr4_1:65462838-65462857 Msa0564740:intron 35.0%
!! TCAAGATTTTAAAAGGGTGG+TGG + chr4_1:65462900-65462919 Msa0564740:intron 35.0%
TATCATTAAGGGGTGGAATA+AGG + chr4_1:65462999-65463018 Msa0564740:intron 35.0%
!! AAAAAGCATCGATGAAAAGG+GGG + chr4_1:65463071-65463090 Msa0564740:intron 35.0%
TATCCGGAAAGTTAAGTTTG+AGG + chr4_1:65463125-65463144 Msa0564740:intron 35.0%
ACTCCTCAAACTTAACTTTC+CGG - chr4_1:65463131-65463150 None:intergenic 35.0%
AAGTTAAGTTTGAGGAGTTG+TGG + chr4_1:65463133-65463152 Msa0564740:intron 35.0%
!! TCAATGCATCTTTAGCCTTA+AGG - chr4_1:65463164-65463183 None:intergenic 35.0%
TCCGTAACTTGATACATTTG+TGG - chr4_1:65463245-65463264 None:intergenic 35.0%
GAAGAGTAGAAATTCGATCA+AGG + chr4_1:65463263-65463282 Msa0564740:intron 35.0%
CTATTTCACTACTCATGTAG+CGG + chr4_1:65463347-65463366 Msa0564740:intron 35.0%
!!! GGATGATAATGGTATTTTGG+TGG + chr4_1:65463425-65463444 Msa0564740:intron 35.0%
TCCTTTCTCCTTATTGGAAA+TGG + chr4_1:65463449-65463468 Msa0564740:intron 35.0%
TCCATTTCCAATAAGGAGAA+AGG - chr4_1:65463453-65463472 None:intergenic 35.0%
TTTCTCCTTATTGGAAATGG+AGG + chr4_1:65463452-65463471 Msa0564740:intron 35.0%
!! AGAATGTCTCATTTTCAAGG+TGG + chr4_1:65463866-65463885 Msa0564740:intron 35.0%
!! TTTCAAGGTGGATTTTGAGA+AGG + chr4_1:65463878-65463897 Msa0564740:intron 35.0%
!! TTTTGAGAAGGCGTATGATT+CGG + chr4_1:65463890-65463909 Msa0564740:intron 35.0%
AGCATGTCTATTCTTGTCAA+TGG + chr4_1:65464002-65464021 Msa0564740:intron 35.0%
GCATGTCTATTCTTGTCAAT+GGG + chr4_1:65464003-65464022 Msa0564740:intron 35.0%
!! CCCAATACAAAGAGTATCAT+CGG - chr4_1:65464209-65464228 None:intergenic 35.0%
CCGATGATACTCTTTGTATT+GGG + chr4_1:65464206-65464225 Msa0564740:intron 35.0%
GCCCAAAGATTATTAACTGT+TGG - chr4_1:65464235-65464254 None:intergenic 35.0%
! CATCTCAAAACCTCTAAGAA+GGG - chr4_1:65464266-65464285 None:intergenic 35.0%
! CTTTAAAAGCTCGTTGATAG+GGG + chr4_1:65464309-65464328 Msa0564740:intron 35.0%
! GAACGTTCCAAGTGATTTTA+TGG + chr4_1:65464333-65464352 Msa0564740:intron 35.0%
! TCCAAGTGATTTTATGGAGA+TGG + chr4_1:65464339-65464358 Msa0564740:intron 35.0%
! TGCATTCCTTTCAAGTACTT+GGG + chr4_1:65464391-65464410 Msa0564740:intron 35.0%
AGTGGGAAGTTAAATTCATG+GGG + chr4_1:65464475-65464494 Msa0564740:intron 35.0%
ATCTTCTTCCAAACTTGTAC+CGG - chr4_1:65464592-65464611 None:intergenic 35.0%
! CAAAGAGAATTTTTATGGGG+AGG + chr4_1:65464622-65464641 Msa0564740:intron 35.0%
AAGGGGGAAAGAAAATTTGT+TGG + chr4_1:65464650-65464669 Msa0564740:intron 35.0%
! AGGGGGAAAGAAAATTTGTT+GGG + chr4_1:65464651-65464670 Msa0564740:intron 35.0%
!! AGAAAATTTGTTGGGTGAAG+TGG + chr4_1:65464659-65464678 Msa0564740:intron 35.0%
!! GAAAATTTGTTGGGTGAAGT+GGG + chr4_1:65464660-65464679 Msa0564740:intron 35.0%
AAGTAAAAGAAATGGGGGTT+TGG + chr4_1:65464696-65464715 Msa0564740:intron 35.0%
AGTAAAAGAAATGGGGGTTT+GGG + chr4_1:65464697-65464716 Msa0564740:intron 35.0%
AAATATGGTACTAGTGTGGA+GGG + chr4_1:65464820-65464839 Msa0564740:intron 35.0%
! GAACTTAATTGGTTCAACTC+TGG + chr4_1:65464925-65464944 Msa0564740:intron 35.0%
! GGAGAAGACATCTTTTTATG+TGG + chr4_1:65465124-65465143 Msa0564740:intron 35.0%
! ACATCTTTTTATGTGGGAAG+AGG + chr4_1:65465131-65465150 Msa0564740:intron 35.0%
AGTGCGGTTGAATAATTAAG+AGG + chr4_1:65465188-65465207 Msa0564740:intron 35.0%
ATTAAGAGGATAAGTGGAAG+TGG + chr4_1:65465202-65465221 Msa0564740:intron 35.0%
TTATTCTTAGTGAGGTGACT+TGG + chr4_1:65465283-65465302 Msa0564740:intron 35.0%
!! AATGCGTTTTTGAGAAGCTT+TGG + chr4_1:65465319-65465338 Msa0564740:intron 35.0%
CTTGAGAAATGTTCTAGTGT+CGG + chr4_1:65465422-65465441 Msa0564740:intron 35.0%
TTGAGAAATGTTCTAGTGTC+GGG + chr4_1:65465423-65465442 Msa0564740:intron 35.0%
CTATTACATAACCCACACAA+AGG - chr4_1:65465456-65465475 None:intergenic 35.0%
! CTTTGTGTGGGTTATGTAAT+AGG + chr4_1:65465454-65465473 Msa0564740:intron 35.0%
ATGTATAAAAAGGTGATGCG+CGG - chr4_1:65465490-65465509 None:intergenic 35.0%
CAATGAATAAAGAGATTCGG+AGG - chr4_1:65465576-65465595 None:intergenic 35.0%
CTCCGAATCTCTTTATTCAT+TGG + chr4_1:65465574-65465593 Msa0564740:intron 35.0%
! TCTTTATTCATTGGGAGTGT+TGG + chr4_1:65465583-65465602 Msa0564740:intron 35.0%
GAGATAAGAAGGTCAAAAAG+GGG + chr4_1:65465619-65465638 Msa0564740:intron 35.0%
!!! TTTTGAGGTGGATGTTATTG+TGG + chr4_1:65465716-65465735 Msa0564740:intron 35.0%
!! TAAAAGTGTTGGCTTGGAAA+TGG + chr4_1:65465745-65465764 Msa0564740:intron 35.0%
!! AAAAGTGTTGGCTTGGAAAT+GGG + chr4_1:65465746-65465765 Msa0564740:intron 35.0%
CACTCAAAAAACAGACATAC+CGG - chr4_1:65465792-65465811 None:intergenic 35.0%
!!! CAGTAGTTTTTTTGTGCCTT+TGG + chr4_1:65465985-65466004 Msa0564740:intron 35.0%
ATAGAGATCAAAGGATCACA+GGG - chr4_1:65466039-65466058 None:intergenic 35.0%
AATAGAGATCAAAGGATCAC+AGG - chr4_1:65466040-65466059 None:intergenic 35.0%
TGTGATCCTTTGATCTCTAT+TGG + chr4_1:65466039-65466058 Msa0564740:intron 35.0%
!!! TGTTTTGGCATATGTATAGG+AGG + chr4_1:65466220-65466239 Msa0564740:intron 35.0%
!! GTTTTGGCATATGTATAGGA+GGG + chr4_1:65466221-65466240 Msa0564740:intron 35.0%
!! CGTGCGTCATTATTTGTTTT+GGG + chr4_1:65466324-65466343 Msa0564740:intron 35.0%
!!! GTTTTGGGTGGTTTTTTAAG+GGG + chr4_1:65466339-65466358 Msa0564740:intron 35.0%
GAAATCGGTTGCCATAATAA+CGG - chr4_1:65466380-65466399 None:intergenic 35.0%
TAAGACACACTAATAAGCTC+GGG - chr4_1:65466428-65466447 None:intergenic 35.0%
GTAAGACACACTAATAAGCT+CGG - chr4_1:65466429-65466448 None:intergenic 35.0%
GCTTATTAGTGTGTCTTACA+CGG + chr4_1:65466430-65466449 Msa0564740:intron 35.0%
CTTATTAGTGTGTCTTACAC+GGG + chr4_1:65466431-65466450 Msa0564740:intron 35.0%
CCATTAAACCTCTTACTTCT+TGG - chr4_1:65466678-65466697 None:intergenic 35.0%
CCAAGAAGTAAGAGGTTTAA+TGG + chr4_1:65466675-65466694 Msa0564740:intron 35.0%
ACAAGAATTACTTCCCGTTA+AGG + chr4_1:65466755-65466774 Msa0564740:intron 35.0%
!!! TTTTTTATATGCAGCCACCA+AGG + chr4_1:65467205-65467224 Msa0564740:intron 35.0%
TTACCTTGAAATGAACTCTG+AGG - chr4_1:65467244-65467263 None:intergenic 35.0%
ACAAATCACAAACAGAGACT+CGG - chr4_1:65467763-65467782 None:intergenic 35.0%
CGAAACTAGTGTCTAATAGA+TGG - chr4_1:65468055-65468074 None:intergenic 35.0%
ATAGACCTGTCGTTAAAATC+AGG + chr4_1:65468126-65468145 Msa0564740:intron 35.0%
TAGACCTGTCGTTAAAATCA+GGG + chr4_1:65468127-65468146 Msa0564740:intron 35.0%
! GAGATAATAGCCATGGTTTT+TGG + chr4_1:65468149-65468168 Msa0564740:intron 35.0%
AAATCATTACATGGGAGTTG+AGG - chr4_1:65468180-65468199 None:intergenic 35.0%
AACCTGATTGAAAAAAGCAG+TGG + chr4_1:65468418-65468437 Msa0564740:intron 35.0%
TTTATATCCCTGAAGGTTAC+GGG - chr4_1:65468468-65468487 None:intergenic 35.0%
!! AATGGGTTTTATATCCCTGA+AGG - chr4_1:65468475-65468494 None:intergenic 35.0%
TAGGTTCACCCAATAACAAT+GGG - chr4_1:65468492-65468511 None:intergenic 35.0%
ATAGGTTCACCCAATAACAA+TGG - chr4_1:65468493-65468512 None:intergenic 35.0%
TCTTTGTGATATGTGACTGA+AGG + chr4_1:65468519-65468538 Msa0564740:intron 35.0%
GAATGTACCTCGTTAAATTC+AGG + chr4_1:65468647-65468666 Msa0564740:intron 35.0%
ACCTGATTGAAAAAAAGCAG+TGG + chr4_1:65469028-65469047 Msa0564740:intron 35.0%
!!! ACCACTGCTTTTTTTCAATC+AGG - chr4_1:65469032-65469051 None:intergenic 35.0%
TATATATCCCTGAAGGTTAC+GGG - chr4_1:65469078-65469097 None:intergenic 35.0%
!! AATGGGTTATATATCCCTGA+AGG - chr4_1:65469085-65469104 None:intergenic 35.0%
ATATCACAAAGACAAGACAG+AGG - chr4_1:65469121-65469140 None:intergenic 35.0%
TCTTTGTGATATGTGACTGA+AGG + chr4_1:65468519-65468538 Msa0564740:intron 35.0%
AACCTGATTGAAAAAAGCAG+TGG + chr4_1:65468418-65468437 Msa0564740:intron 35.0%
GTATCACAAAGACAAGACAT+AGG - chr4_1:65469518-65469537 None:intergenic 35.0%
TCTTTGTGATACGTGATTGA+AGG + chr4_1:65469526-65469545 Msa0564740:intron 35.0%
ATTGAAGGTTCAGTAAACGA+TGG + chr4_1:65469541-65469560 Msa0564740:intron 35.0%
TGATTTAGCCACCTTCTTAA+TGG + chr4_1:65469692-65469711 Msa0564740:intron 35.0%
AGTAGCAGTAGCTTAATTGT+AGG - chr4_1:65470078-65470097 None:intergenic 35.0%
AATTGTACTTGCAGAACACT+AGG + chr4_1:65470145-65470164 Msa0564740:intron 35.0%
ATTGTACTTGCAGAACACTA+GGG + chr4_1:65470146-65470165 Msa0564740:intron 35.0%
! TCCATTAGAGTGTCTATTCT+TGG - chr4_1:65470298-65470317 None:intergenic 35.0%
! AATAGACACTCTAATGGACA+AGG + chr4_1:65470300-65470319 Msa0564740:CDS 35.0%
!! ATAAACTTTGCTGACTTGAC+TGG - chr4_1:65470333-65470352 None:intergenic 35.0%
TACTTTCTAGGTCAAAGGTT+TGG + chr4_1:65470482-65470501 Msa0564740:intron 35.0%
AAAATCAACTCAATGTGGCA+AGG - chr4_1:65470715-65470734 None:intergenic 35.0%
! ATCACGGTTTTTGTAAACTC+CGG - chr4_1:65471088-65471107 None:intergenic 35.0%
TGTTTCCAACTTAGCGATGT+GGG - chr4_1:65461662-65461681 None:intergenic 40.0%
TTGTTTCCAACTTAGCGATG+TGG - chr4_1:65461663-65461682 None:intergenic 40.0%
ACTACCTAGGTAAGGACAAT+TGG + chr4_1:65461930-65461949 Msa0564740:intron 40.0%
!!! ACTTTGGTGGATTCTTTTGG+TGG + chr4_1:65462370-65462389 Msa0564740:intron 40.0%
!!! CTTTGGTGGATTCTTTTGGT+GGG + chr4_1:65462371-65462390 Msa0564740:intron 40.0%
!!! TTTGGTGGATTCTTTTGGTG+GGG + chr4_1:65462372-65462391 Msa0564740:intron 40.0%
! AATGTGATTTGTCGGCAAAG+AGG + chr4_1:65462467-65462486 Msa0564740:intron 40.0%
TTTGTAGAAGGGATGAAAGG+AGG + chr4_1:65462569-65462588 Msa0564740:intron 40.0%
TTGTAGAAGGGATGAAAGGA+GGG + chr4_1:65462570-65462589 Msa0564740:intron 40.0%
CATTTCCAAAACTTGCGATG+AGG - chr4_1:65462614-65462633 None:intergenic 40.0%
CAAGTCCATATCACCTAGAA+AGG - chr4_1:65462650-65462669 None:intergenic 40.0%
CTTTCTAGGTGATATGGACT+TGG + chr4_1:65462648-65462667 Msa0564740:intron 40.0%
GGACTTGGAGGATTTAAATG+TGG + chr4_1:65462663-65462682 Msa0564740:intron 40.0%
CTTGGAGGATTTAAATGTGG+TGG + chr4_1:65462666-65462685 Msa0564740:intron 40.0%
TGTTTCCGATCATTGTCTGT+TGG + chr4_1:65462810-65462829 Msa0564740:intron 40.0%
AAGCACCAACAGACAATGAT+CGG - chr4_1:65462818-65462837 None:intergenic 40.0%
! CTGTTGGTGCTTAAAAATGG+TGG + chr4_1:65462826-65462845 Msa0564740:intron 40.0%
TGGTGCTTAAAAATGGTGGT+TGG + chr4_1:65462830-65462849 Msa0564740:intron 40.0%
AAAATGGTGGTTGGAATTGG+GGG + chr4_1:65462839-65462858 Msa0564740:intron 40.0%
!! AGATTTTAAAAGGGTGGTGG+AGG + chr4_1:65462903-65462922 Msa0564740:intron 40.0%
AAGAACGAAACTCATCCAAC+CGG - chr4_1:65462953-65462972 None:intergenic 40.0%
! CATTGATTGCCCAAAGATCA+AGG + chr4_1:65463178-65463197 Msa0564740:intron 40.0%
! AAATTCGATCAAGGCGCTTA+GGG + chr4_1:65463272-65463291 Msa0564740:intron 40.0%
GAGTATATGATGAGAAGGGT+GGG + chr4_1:65463930-65463949 Msa0564740:intron 40.0%
TGAATACTAATCTCCTCCGT+CGG - chr4_1:65464032-65464051 None:intergenic 40.0%
!!! TTGTTTTTGTTGGTAGCGGA+AGG + chr4_1:65464089-65464108 Msa0564740:intron 40.0%
!! TAGTGGGTTGATGAGAAATG+CGG + chr4_1:65464115-65464134 Msa0564740:intron 40.0%
!! GTGGATCGTGATTTGTTTGA+GGG + chr4_1:65464137-65464156 Msa0564740:intron 40.0%
TTGTTTGAGGGCTTCAACTT+TGG + chr4_1:65464149-65464168 Msa0564740:intron 40.0%
! GGCTTCAACTTTGGAAATAG+CGG + chr4_1:65464158-65464177 Msa0564740:intron 40.0%
! CTTTGGAAATAGCGGTTTAG+TGG + chr4_1:65464166-65464185 Msa0564740:intron 40.0%
GCCGATGATACTCTTTGTAT+TGG + chr4_1:65464205-65464224 Msa0564740:intron 40.0%
GCTATGAAATCCCTTCTTAG+AGG + chr4_1:65464253-65464272 Msa0564740:intron 40.0%
! CCATCTCAAAACCTCTAAGA+AGG - chr4_1:65464267-65464286 None:intergenic 40.0%
!!! CCTTCTTAGAGGTTTTGAGA+TGG + chr4_1:65464264-65464283 Msa0564740:intron 40.0%
!!! TAGAGGTTTTGAGATGGTGT+CGG + chr4_1:65464270-65464289 Msa0564740:intron 40.0%
GCCATCTCCATAAAATCACT+TGG - chr4_1:65464343-65464362 None:intergenic 40.0%
! GTGCATTCCTTTCAAGTACT+TGG + chr4_1:65464390-65464409 Msa0564740:intron 40.0%
ACTCTCGAAGATTGTCAACT+TGG + chr4_1:65464431-65464450 Msa0564740:intron 40.0%
CTCTCGAAGATTGTCAACTT+GGG + chr4_1:65464432-65464451 Msa0564740:intron 40.0%
CCACTAATACTCTCTACCAA+CGG - chr4_1:65464460-65464479 None:intergenic 40.0%
!! CGTTGGTAGAGAGTATTAGT+GGG + chr4_1:65464458-65464477 Msa0564740:intron 40.0%
! AGAATTTTTATGGGGAGGAG+TGG + chr4_1:65464627-65464646 Msa0564740:intron 40.0%
GTAAAAGAAATGGGGGTTTG+GGG + chr4_1:65464698-65464717 Msa0564740:intron 40.0%
TAAAAGAAATGGGGGTTTGG+GGG + chr4_1:65464699-65464718 Msa0564740:intron 40.0%
! TAGATGGGAAAGTGGCTTTA+TGG + chr4_1:65464779-65464798 Msa0564740:intron 40.0%
! GATGTGTTGTTGGCCAAATA+TGG + chr4_1:65464805-65464824 Msa0564740:intron 40.0%
CTCCACACTAGTACCATATT+TGG - chr4_1:65464821-65464840 None:intergenic 40.0%
CAAATATGGTACTAGTGTGG+AGG + chr4_1:65464819-65464838 Msa0564740:intron 40.0%
TGGAAGGAGCTAACTAAGAT+TGG + chr4_1:65464892-65464911 Msa0564740:intron 40.0%
!!! TTTTGGGATGATAATTGGCG+AGG + chr4_1:65464985-65465004 Msa0564740:intron 40.0%
! TTTGGGATGATAATTGGCGA+GGG + chr4_1:65464986-65465005 Msa0564740:intron 40.0%
TTCTATCTCAGCGCAAAAGA+AGG + chr4_1:65465044-65465063 Msa0564740:intron 40.0%
! TCTTTTTATGTGGGAAGAGG+AGG + chr4_1:65465134-65465153 Msa0564740:intron 40.0%
AAGTGGAAGCTAGAAGATTC+TGG + chr4_1:65465219-65465238 Msa0564740:intron 40.0%
!!! TGGAACTTTTTCGGTAAGCT+CGG + chr4_1:65465239-65465258 Msa0564740:intron 40.0%
!! GGAGGGTATTATTCTTAGTG+AGG + chr4_1:65465275-65465294 Msa0564740:intron 40.0%
! CTTGGAGAGCTTTTCTAAAC+CGG + chr4_1:65465376-65465395 Msa0564740:intron 40.0%
! TTGGAGAGCTTTTCTAAACC+GGG + chr4_1:65465377-65465396 Msa0564740:intron 40.0%
! AAGGCAAGATTTTCCATGGT+AGG - chr4_1:65465405-65465424 None:intergenic 40.0%
! TCTCAAGGCAAGATTTTCCA+TGG - chr4_1:65465409-65465428 None:intergenic 40.0%
CGACACTAGAACATTTCTCA+AGG - chr4_1:65465424-65465443 None:intergenic 40.0%
! GTGTGGGTTATGTAATAGGA+TGG + chr4_1:65465458-65465477 Msa0564740:intron 40.0%
TGGGTTATGTAATAGGATGG+AGG + chr4_1:65465461-65465480 Msa0564740:intron 40.0%
ACATTGTGATGTTGCTAGTG+CGG + chr4_1:65465506-65465525 Msa0564740:intron 40.0%
TGAATAAAGAGATTCGGAGG+AGG - chr4_1:65465573-65465592 None:intergenic 40.0%
TGGAGGAGATAGAGATAAGA+AGG + chr4_1:65465608-65465627 Msa0564740:intron 40.0%
TAAGAAGGTCAAAAAGGGGA+AGG + chr4_1:65465623-65465642 Msa0564740:intron 40.0%
AAGAAGGTCAAAAAGGGGAA+GGG + chr4_1:65465624-65465643 Msa0564740:intron 40.0%
AAAAGGGGAAGGGGATTATT+TGG + chr4_1:65465634-65465653 Msa0564740:intron 40.0%
!!! CAACGATGCTATTTTTGAGG+TGG + chr4_1:65465704-65465723 Msa0564740:intron 40.0%
GATGTGTAGAATGCAGATTC+CGG + chr4_1:65465770-65465789 Msa0564740:intron 40.0%
!!! CGGTATGTCTGTTTTTTGAG+TGG + chr4_1:65465790-65465809 Msa0564740:intron 40.0%
!!! GTCTGTTTTTTGAGTGGTGT+TGG + chr4_1:65465796-65465815 Msa0564740:intron 40.0%
!!! GTTTTTTTGTGCCTTTGGTC+TGG + chr4_1:65465990-65466009 Msa0564740:intron 40.0%
GATCCTTTGATCTCTATTGG+TGG + chr4_1:65466042-65466061 Msa0564740:intron 40.0%
TGCCTGCTTTAGTGTTTGTT+TGG + chr4_1:65466089-65466108 Msa0564740:intron 40.0%
GACCAAACAAACACTAAAGC+AGG - chr4_1:65466094-65466113 None:intergenic 40.0%
!!! TTGCAGTTGGTTTTGTTGGT+TGG + chr4_1:65466130-65466149 Msa0564740:intron 40.0%
!!! TGCAGTTGGTTTTGTTGGTT+GGG + chr4_1:65466131-65466150 Msa0564740:intron 40.0%
!!! TGCAGGCCTGTGTTATTTTT+GGG + chr4_1:65466184-65466203 Msa0564740:intron 40.0%
!! TGGTGAGTTTGGAGTGTTTT+TGG + chr4_1:65466259-65466278 Msa0564740:intron 40.0%
!!! TGAGTTTGGAGTGTTTTTGG+TGG + chr4_1:65466262-65466281 Msa0564740:intron 40.0%
AATGACGCACGCTTATACTA+AGG - chr4_1:65466315-65466334 None:intergenic 40.0%
! GCGTGCGTCATTATTTGTTT+TGG + chr4_1:65466323-65466342 Msa0564740:intron 40.0%
!!! GCGTCATTATTTGTTTTGGG+TGG + chr4_1:65466327-65466346 Msa0564740:intron 40.0%
TCCAATGAAAGGTCCTTAAC+GGG - chr4_1:65466771-65466790 None:intergenic 40.0%
CTCCAATGAAAGGTCCTTAA+CGG - chr4_1:65466772-65466791 None:intergenic 40.0%
TTACAGAAGTTGCGTACACT+TGG - chr4_1:65467111-65467130 None:intergenic 40.0%
TGACCTCAGAGTTCATTTCA+AGG + chr4_1:65467238-65467257 Msa0564740:CDS 40.0%
ATTTGGAAGGAAAAAGGCTG+AGG + chr4_1:65467647-65467666 Msa0564740:intron 40.0%
! TTACAAGAGGCATGTTCACA+TGG - chr4_1:65467680-65467699 None:intergenic 40.0%
GCATGTTCACATGTTACAAG+AGG - chr4_1:65467693-65467712 None:intergenic 40.0%
!!! CAGGCAACTGCTTTTTCATA+GGG - chr4_1:65468095-65468114 None:intergenic 40.0%
!!! ACAGGCAACTGCTTTTTCAT+AGG - chr4_1:65468096-65468115 None:intergenic 40.0%
!! ATCTCCCTGATTTTAACGAC+AGG - chr4_1:65468134-65468153 None:intergenic 40.0%
AATCAGGGAGATAATAGCCA+TGG + chr4_1:65468142-65468161 Msa0564740:intron 40.0%
! GAGGGTACATTTCGTACATA+TGG + chr4_1:65468214-65468233 Msa0564740:intron 40.0%
TCTAAGTAATAAGGGTAGCC+AGG - chr4_1:65468319-65468338 None:intergenic 40.0%
!!! GACCACTGCTTTTTTCAATC+AGG - chr4_1:65468423-65468442 None:intergenic 40.0%
GATTGAAAAAAGCAGTGGTC+TGG + chr4_1:65468423-65468442 Msa0564740:intron 40.0%
ACTGAAGGTTCAGTAAACGA+TGG + chr4_1:65468534-65468553 Msa0564740:intron 40.0%
CTATCTCCCTGAATTTAACG+AGG - chr4_1:65468657-65468676 None:intergenic 40.0%
! TCTAAGTAATGAGGTTAGCC+AGG - chr4_1:65468824-65468843 None:intergenic 40.0%
! TCTAAGTAATGAGGTTAGCC+AGG - chr4_1:65468824-65468843 None:intergenic 40.0%
GAGGTTCACCCAATAACAAT+GGG - chr4_1:65469102-65469121 None:intergenic 40.0%
AGAGGTTCACCCAATAACAA+TGG - chr4_1:65469103-65469122 None:intergenic 40.0%
!! GTGGTTTGTTGTCTTGTGAA+TGG + chr4_1:65469245-65469264 Msa0564740:intron 40.0%
TCTCCCTGAGTTTAACAAGA+GGG - chr4_1:65469272-65469291 None:intergenic 40.0%
ATCTCCCTGAGTTTAACAAG+AGG - chr4_1:65469273-65469292 None:intergenic 40.0%
CAGGTTGTTGCATGACTATA+GGG - chr4_1:65469411-65469430 None:intergenic 40.0%
! TCAGGTTGTTGCATGACTAT+AGG - chr4_1:65469412-65469431 None:intergenic 40.0%
!!! GACCACTGCTTTTTTCAATC+AGG - chr4_1:65468423-65468442 None:intergenic 40.0%
GATTGAAAAAAGCAGTGGTC+TGG + chr4_1:65468423-65468442 Msa0564740:intron 40.0%
AAGCAACTAGGCCATTAAGA+AGG - chr4_1:65469706-65469725 None:intergenic 40.0%
ATGAGGCAAATCAAGCAACT+AGG - chr4_1:65469718-65469737 None:intergenic 40.0%
ATATCACAGACATTTCCGAG+AGG - chr4_1:65469878-65469897 None:intergenic 40.0%
!!! TACCTTTTAGCCTTGGTCAA+GGG - chr4_1:65470198-65470217 None:intergenic 40.0%
! TTCCAAGTACCTTTTAGCCT+TGG - chr4_1:65470205-65470224 None:intergenic 40.0%
ACAGAAACGTCTGAATGGAA+TGG - chr4_1:65470250-65470269 None:intergenic 40.0%
GCCAAGAATAGACACTCTAA+TGG + chr4_1:65470294-65470313 Msa0564740:CDS 40.0%
CAAGTCAGCAAAGTTTATCC+TGG + chr4_1:65470335-65470354 Msa0564740:CDS 40.0%
! CATACGGTTGATTCTTCCAT+GGG - chr4_1:65470580-65470599 None:intergenic 40.0%
! ACATACGGTTGATTCTTCCA+TGG - chr4_1:65470581-65470600 None:intergenic 40.0%
AAGAAGAGGGCTTAAACTCT+AGG + chr4_1:65470891-65470910 Msa0564740:exon 40.0%
TATTGCTGCCTTGTACTCTT+AGG + chr4_1:65470920-65470939 Msa0564740:three_prime_UTR 40.0%
! TGACAAGACCTAAGAGTACA+AGG - chr4_1:65470931-65470950 None:intergenic 40.0%
AATGTCCCACATCGCTAAGT+TGG + chr4_1:65461654-65461673 Msa0564740:intron 45.0%
! TCTTGTGCGAGGCATTATAG+TGG + chr4_1:65462313-65462332 Msa0564740:intron 45.0%
!! GTGGAGGCATTCTCTCTATT+TGG + chr4_1:65462332-65462351 Msa0564740:intron 45.0%
! GAGGCATTCTCTCTATTTGG+AGG + chr4_1:65462335-65462354 Msa0564740:intron 45.0%
GAGGAAATCTTGTGCGACTT+TGG + chr4_1:65462354-65462373 Msa0564740:intron 45.0%
GAAATCTTGTGCGACTTTGG+TGG + chr4_1:65462357-65462376 Msa0564740:intron 45.0%
!!! GCGACTTTGGTGGATTCTTT+TGG + chr4_1:65462367-65462386 Msa0564740:intron 45.0%
ATGTTGGAGTCACCTTGGAT+TGG + chr4_1:65462401-65462420 Msa0564740:intron 45.0%
TGTTGGAGTCACCTTGGATT+GGG + chr4_1:65462402-65462421 Msa0564740:intron 45.0%
ATTGGGGAGTCGCGAAAATT+TGG + chr4_1:65462419-65462438 Msa0564740:intron 45.0%
!! AGTCGCGAAAATTTGGTGTG+TGG + chr4_1:65462426-65462445 Msa0564740:intron 45.0%
GAGCATCATAATAGAGTCCG+AGG + chr4_1:65462514-65462533 Msa0564740:intron 45.0%
ATAATAGAGTCCGAGGTGTG+TGG + chr4_1:65462521-65462540 Msa0564740:intron 45.0%
CGGTTTGTAGAAGGGATGAA+AGG + chr4_1:65462566-65462585 Msa0564740:intron 45.0%
TGTAGAAGGGATGAAAGGAG+GGG + chr4_1:65462571-65462590 Msa0564740:intron 45.0%
ATGAAAGGAGGGGGGTTAAT+GGG + chr4_1:65462581-65462600 Msa0564740:intron 45.0%
! AGCTTCCTCATCGCAAGTTT+TGG + chr4_1:65462606-65462625 Msa0564740:intron 45.0%
TCTAGGTGATATGGACTTGG+AGG + chr4_1:65462651-65462670 Msa0564740:intron 45.0%
TTCACGTGGTATCATCCCAA+TGG + chr4_1:65462697-65462716 Msa0564740:intron 45.0%
GATGCTTGTTTCGGAAGAGT+GGG + chr4_1:65462744-65462763 Msa0564740:intron 45.0%
GGAAGAGTGGGAGAATGTTT+GGG + chr4_1:65462756-65462775 Msa0564740:intron 45.0%
GAAGAGTGGGAGAATGTTTG+GGG + chr4_1:65462757-65462776 Msa0564740:intron 45.0%
AAGAGTGGGAGAATGTTTGG+GGG + chr4_1:65462758-65462777 Msa0564740:intron 45.0%
CAATGATCGGAAACATCCCT+TGG - chr4_1:65462805-65462824 None:intergenic 45.0%
!!! TTTTAAAAGGGTGGTGGAGG+AGG + chr4_1:65462906-65462925 Msa0564740:intron 45.0%
CATTAAGGGGTGGAATAAGG+AGG + chr4_1:65463002-65463021 Msa0564740:intron 45.0%
! GGTGGAATAAGGAGGAGTAT+GGG + chr4_1:65463010-65463029 Msa0564740:intron 45.0%
! GTGGAATAAGGAGGAGTATG+GGG + chr4_1:65463011-65463030 Msa0564740:intron 45.0%
! TGGAATAAGGAGGAGTATGG+GGG + chr4_1:65463012-65463031 Msa0564740:intron 45.0%
CATCGTGGGAAGTAGATATC+CGG + chr4_1:65463109-65463128 Msa0564740:intron 45.0%
GGAGTTGTGGAGAATCCTTA+AGG + chr4_1:65463146-65463165 Msa0564740:intron 45.0%
CCATCGTGACCTTGATCTTT+GGG - chr4_1:65463190-65463209 None:intergenic 45.0%
ATCAAGGTCACGATGGCTTA+AGG + chr4_1:65463194-65463213 Msa0564740:intron 45.0%
! GAAATTCGATCAAGGCGCTT+AGG + chr4_1:65463271-65463290 Msa0564740:intron 45.0%
ACCTTCCTACGAACCTCAAA+CGG - chr4_1:65463321-65463340 None:intergenic 45.0%
TTTCACTACTCATGTAGCGG+AGG + chr4_1:65463350-65463369 Msa0564740:intron 45.0%
AATTCTACCCCATCCAACCT+CGG - chr4_1:65463390-65463409 None:intergenic 45.0%
CTCCTTATTGGAAATGGAGG+CGG + chr4_1:65463455-65463474 Msa0564740:intron 45.0%
AACCGCCTCCATTTCCAATA+AGG - chr4_1:65463460-65463479 None:intergenic 45.0%
CGGTTGTGAGAGATAGTGAT+GGG + chr4_1:65463475-65463494 Msa0564740:intron 45.0%
GGTTGTGAGAGATAGTGATG+GGG + chr4_1:65463476-65463495 Msa0564740:intron 45.0%
! TAGTGATGGGGATAAGAGTC+CGG + chr4_1:65463488-65463507 Msa0564740:intron 45.0%
AAGTTAAAGTCATCCGGACC+CGG - chr4_1:65463510-65463529 None:intergenic 45.0%
GCTAATGAGATCTTGCCGAA+AGG + chr4_1:65463597-65463616 Msa0564740:intron 45.0%
! GATCTTGCCGAAAGGTATGT+TGG + chr4_1:65463605-65463624 Msa0564740:intron 45.0%
TCCAACGGTGATGACACTTT+GGG - chr4_1:65463651-65463670 None:intergenic 45.0%
!! TAGCTAAGGTATTGGCGAGA+AGG + chr4_1:65463721-65463740 Msa0564740:intron 45.0%
! TTAAGGAACGCCGATTGAGA+AGG - chr4_1:65463777-65463796 None:intergenic 45.0%
TTCTCAATCGGCGTTCCTTA+AGG + chr4_1:65463776-65463795 Msa0564740:intron 45.0%
TCTCAATCGGCGTTCCTTAA+GGG + chr4_1:65463777-65463796 Msa0564740:intron 45.0%
!!! TTCGGTGGATTGGGGTTTTT+TGG + chr4_1:65463908-65463927 Msa0564740:intron 45.0%
GGAGTATATGATGAGAAGGG+TGG + chr4_1:65463929-65463948 Msa0564740:intron 45.0%
TGTGTGACAAGTGGGTGAAT+TGG + chr4_1:65463955-65463974 Msa0564740:intron 45.0%
CAAGTGGGTGAATTGGATGA+AGG + chr4_1:65463962-65463981 Msa0564740:intron 45.0%
TGGATGAAGGCTTGTGTTTG+TGG + chr4_1:65463975-65463994 Msa0564740:intron 45.0%
ATGAAGGCTTGTGTTTGTGG+TGG + chr4_1:65463978-65463997 Msa0564740:intron 45.0%
CGGAGGAGATTAGTATTCAC+CGG + chr4_1:65464033-65464052 Msa0564740:intron 45.0%
GGAGGAGATTAGTATTCACC+GGG + chr4_1:65464034-65464053 Msa0564740:intron 45.0%
GAGGAGATTAGTATTCACCG+GGG + chr4_1:65464035-65464054 Msa0564740:intron 45.0%
ATTCACCGGGGACTTAAACA+AGG + chr4_1:65464047-65464066 Msa0564740:intron 45.0%
! GATCACCTTGTTTAAGTCCC+CGG - chr4_1:65464055-65464074 None:intergenic 45.0%
!!! TTGGTAGCGGAAGGTTTTAG+TGG + chr4_1:65464098-65464117 Msa0564740:intron 45.0%
!!! TGGTAGCGGAAGGTTTTAGT+GGG + chr4_1:65464099-65464118 Msa0564740:intron 45.0%
!! GGTGGATCGTGATTTGTTTG+AGG + chr4_1:65464136-65464155 Msa0564740:intron 45.0%
!!! AGAGGTTTTGAGATGGTGTC+GGG + chr4_1:65464271-65464290 Msa0564740:intron 45.0%
ATTGTCAACTTGGGAACCGT+TGG + chr4_1:65464441-65464460 Msa0564740:intron 45.0%
!! CCGTTGGTAGAGAGTATTAG+TGG + chr4_1:65464457-65464476 Msa0564740:intron 45.0%
TGAAGCTTCCGGTACAAGTT+TGG + chr4_1:65464581-65464600 Msa0564740:intron 45.0%
! TTTTTATGGGGAGGAGTGGA+AGG + chr4_1:65464631-65464650 Msa0564740:intron 45.0%
! TTTTATGGGGAGGAGTGGAA+GGG + chr4_1:65464632-65464651 Msa0564740:intron 45.0%
!! GTCTTTTGGCTAAGTGACGA+TGG + chr4_1:65464749-65464768 Msa0564740:intron 45.0%
!! TTTTGGCTAAGTGACGATGG+AGG + chr4_1:65464752-65464771 Msa0564740:intron 45.0%
GGCCAAATATGGTACTAGTG+TGG + chr4_1:65464816-65464835 Msa0564740:intron 45.0%
CACCAAAGAGAAGACAACCT+CGG - chr4_1:65464874-65464893 None:intergenic 45.0%
GTTGTCTTCTCTTTGGTGGA+AGG + chr4_1:65464876-65464895 Msa0564740:intron 45.0%
TTGAGCGGAATGTGGGTAAT+AGG + chr4_1:65464950-65464969 Msa0564740:intron 45.0%
TTGGGATGATAATTGGCGAG+GGG + chr4_1:65464987-65465006 Msa0564740:intron 45.0%
GCTGAGATAGAATAGAGCCT+AGG - chr4_1:65465036-65465055 None:intergenic 45.0%
!! GCTTGGAGTGGATTTTCGTT+GGG + chr4_1:65465103-65465122 Msa0564740:intron 45.0%
!!! GGAGGTGCTTTTAAGCCTTA+AGG + chr4_1:65465152-65465171 Msa0564740:intron 45.0%
! GGTGCTTTTAAGCCTTAAGG+AGG + chr4_1:65465155-65465174 Msa0564740:intron 45.0%
AGCCTTAAGGAGGACTTAGA+AGG + chr4_1:65465165-65465184 Msa0564740:intron 45.0%
CTCCTTCTAAGTCCTCCTTA+AGG - chr4_1:65465170-65465189 None:intergenic 45.0%
! TTCTTAGTGAGGTGACTTGG+CGG + chr4_1:65465286-65465305 Msa0564740:intron 45.0%
! GATTTTCCATGGTAGGAACC+CGG - chr4_1:65465398-65465417 None:intergenic 45.0%
TGTGGCTCAAGTTAATGAGG+TGG + chr4_1:65465529-65465548 Msa0564740:intron 45.0%
!! ATTCATTGGGAGTGTTGGCA+TGG + chr4_1:65465588-65465607 Msa0564740:intron 45.0%
AGAAGGTCAAAAAGGGGAAG+GGG + chr4_1:65465625-65465644 Msa0564740:intron 45.0%
! TAGCAACAATTTGGGCGTTG+TGG + chr4_1:65465658-65465677 Msa0564740:intron 45.0%
! TTTGGGCGTTGTGGAAAACT+CGG + chr4_1:65465667-65465686 Msa0564740:intron 45.0%
TGAGGTGGATGTTATTGTGG+AGG + chr4_1:65465719-65465738 Msa0564740:intron 45.0%
! TGTGGAGGAGGTAAAAGTGT+TGG + chr4_1:65465734-65465753 Msa0564740:intron 45.0%
!! AGGAGGTAAAAGTGTTGGCT+TGG + chr4_1:65465739-65465758 Msa0564740:intron 45.0%
! ACCTACTAAGGCACCATTGA+GGG - chr4_1:65465824-65465843 None:intergenic 45.0%
!!! GCATATCAGCTGGTTTTCCT+TGG + chr4_1:65465921-65465940 Msa0564740:intron 45.0%
!! TGTTTGGTGCGGTTTGTTTG+TGG + chr4_1:65465957-65465976 Msa0564740:intron 45.0%
!! CTTTGGTCTGGTTCTGTGAT+GGG + chr4_1:65466002-65466021 Msa0564740:intron 45.0%
GCTCCACCAATAGAGATCAA+AGG - chr4_1:65466048-65466067 None:intergenic 45.0%
! TTGTTTGGTCCTGTTTGCTG+CGG + chr4_1:65466104-65466123 Msa0564740:intron 45.0%
!!! GCTGTTGCAGTTGGTTTTGT+TGG + chr4_1:65466126-65466145 Msa0564740:intron 45.0%
!!! GTGCAGGCCTGTGTTATTTT+TGG + chr4_1:65466183-65466202 Msa0564740:intron 45.0%
TTGGCATATGTATAGGAGGG+TGG + chr4_1:65466224-65466243 Msa0564740:intron 45.0%
TGGCATATGTATAGGAGGGT+GGG + chr4_1:65466225-65466244 Msa0564740:intron 45.0%
TGTTCGAGCCACCGTTATTA+TGG + chr4_1:65466366-65466385 Msa0564740:intron 45.0%
ATCGGTTGCCATAATAACGG+TGG - chr4_1:65466377-65466396 None:intergenic 45.0%
AAAGGGACCCAAGAAGTAAG+AGG + chr4_1:65466667-65466686 Msa0564740:intron 45.0%
TCCCGTTAAGGACCTTTCAT+TGG + chr4_1:65466767-65466786 Msa0564740:intron 45.0%
CGTTAGTTGTCCAAGAGAGA+GGG - chr4_1:65466831-65466850 None:intergenic 45.0%
CCTCTCTCTTGGACAACTAA+CGG + chr4_1:65466829-65466848 Msa0564740:intron 45.0%
CTCTCTCTTGGACAACTAAC+GGG + chr4_1:65466830-65466849 Msa0564740:intron 45.0%
TGAGGTTCTCCCAAAAACCA+TGG - chr4_1:65468162-65468181 None:intergenic 45.0%
CATCTTAGTGGCATAGTTCC+TGG + chr4_1:65468298-65468317 Msa0564740:intron 45.0%
! TGTTTCAAGTAGCCTCCTAG+TGG + chr4_1:65468791-65468810 Msa0564740:intron 45.0%
TGGACCCTCTTGTTAAACTC+AGG + chr4_1:65469265-65469284 Msa0564740:intron 45.0%
GGACCCTCTTGTTAAACTCA+GGG + chr4_1:65469266-65469285 Msa0564740:intron 45.0%
ATATCCCTGAATGTTACGGG+TGG - chr4_1:65469472-65469491 None:intergenic 45.0%
CAACTAGGCCATTAAGAAGG+TGG - chr4_1:65469703-65469722 None:intergenic 45.0%
TCTATATCGAGCAGTCCTCT+CGG + chr4_1:65469860-65469879 Msa0564740:intron 45.0%
!!! GTACCTTTTAGCCTTGGTCA+AGG - chr4_1:65470199-65470218 None:intergenic 45.0%
!! GACCAAGGCTAAAAGGTACT+TGG + chr4_1:65470200-65470219 Msa0564740:CDS 45.0%
AGACGTTCTTGCACACAAAC+AGG + chr4_1:65470224-65470243 Msa0564740:CDS 45.0%
! AGAGTGTCTATTCTTGGCCT+GGG - chr4_1:65470292-65470311 None:intergenic 45.0%
! TAGAGTGTCTATTCTTGGCC+TGG - chr4_1:65470293-65470312 None:intergenic 45.0%
! GACACTCTAATGGACAAGGA+AGG + chr4_1:65470304-65470323 Msa0564740:CDS 45.0%
! ACTCTAATGGACAAGGAAGG+TGG + chr4_1:65470307-65470326 Msa0564740:CDS 45.0%
CTGCATTCTTCAGCAAATCC+AGG - chr4_1:65470356-65470375 None:intergenic 45.0%
GCTTCTGTGCTTGATTGACT+TGG - chr4_1:65470536-65470555 None:intergenic 45.0%
! GGCAGTTCAGAAAGAGGTAT+TGG + chr4_1:65470750-65470769 Msa0564740:intron 45.0%
!!! AAGTTTTTTTTTATTTTATA+AGG + chr4_1:65467498-65467517 Msa0564740:intron 5.0%
!! TAATTAATAATTGATATATT+TGG + chr4_1:65468993-65469012 Msa0564740:intron 5.0%
!! ACTTAGGGAGAGCACTACCT+AGG + chr4_1:65461917-65461936 Msa0564740:intron 50.0%
GGTGCACTGTTCGCAAAGAA+AGG - chr4_1:65462180-65462199 None:intergenic 50.0%
! TGTGCGAGGCATTATAGTGG+AGG + chr4_1:65462316-65462335 Msa0564740:intron 50.0%
! GTGGATTCTTTTGGTGGGGA+GGG + chr4_1:65462376-65462395 Msa0564740:intron 50.0%
TTTGGTGGGGAGGGTTATGT+TGG + chr4_1:65462385-65462404 Msa0564740:intron 50.0%
GGGTTATGTTGGAGTCACCT+TGG + chr4_1:65462396-65462415 Msa0564740:intron 50.0%
GTTGGAGTCACCTTGGATTG+GGG + chr4_1:65462403-65462422 Msa0564740:intron 50.0%
!! CGCGAAAATTTGGTGTGTGG+TGG + chr4_1:65462429-65462448 Msa0564740:intron 50.0%
CAAGAATGCACCACACACCT+CGG - chr4_1:65462534-65462553 None:intergenic 50.0%
GTAGAAGGGATGAAAGGAGG+GGG + chr4_1:65462572-65462591 Msa0564740:intron 50.0%
TAGAAGGGATGAAAGGAGGG+GGG + chr4_1:65462573-65462592 Msa0564740:intron 50.0%
GATGAAAGGAGGGGGGTTAA+TGG + chr4_1:65462580-65462599 Msa0564740:intron 50.0%
TGAAAGGAGGGGGGTTAATG+GGG + chr4_1:65462582-65462601 Msa0564740:intron 50.0%
GTATCATCCCAATGGCAGAG+CGG + chr4_1:65462705-65462724 Msa0564740:intron 50.0%
GAGCGGTGAGTAGGATTGAT+AGG + chr4_1:65462722-65462741 Msa0564740:intron 50.0%
GGATGCTTGTTTCGGAAGAG+TGG + chr4_1:65462743-65462762 Msa0564740:intron 50.0%
CGGAAGAGTGGGAGAATGTT+TGG + chr4_1:65462755-65462774 Msa0564740:intron 50.0%
AGAGTGGGAGAATGTTTGGG+GGG + chr4_1:65462759-65462778 Msa0564740:intron 50.0%
!! ATGCGCTTTGGGTTTTGCCA+AGG + chr4_1:65462785-65462804 Msa0564740:intron 50.0%
!! TGCGCTTTGGGTTTTGCCAA+GGG + chr4_1:65462786-65462805 Msa0564740:intron 50.0%
TGGAGGAACCAAAACGTGTC+CGG + chr4_1:65462931-65462950 Msa0564740:intron 50.0%
! TCATCCAACCGGACACGTTT+TGG - chr4_1:65462942-65462961 None:intergenic 50.0%
GGGTGGAATAAGGAGGAGTA+TGG + chr4_1:65463009-65463028 Msa0564740:intron 50.0%
! TAAGGAGGAGTATGGGGGTA+TGG + chr4_1:65463017-65463036 Msa0564740:intron 50.0%
! AGTATGGGGGTATGGAGGAA+AGG + chr4_1:65463025-65463044 Msa0564740:intron 50.0%
! GTATGGGGGTATGGAGGAAA+GGG + chr4_1:65463026-65463045 Msa0564740:intron 50.0%
!! AAGCATCGATGAAAAGGGGG+AGG + chr4_1:65463074-65463093 Msa0564740:intron 50.0%
ATCGATGAAAAGGGGGAGGA+TGG + chr4_1:65463078-65463097 Msa0564740:intron 50.0%
AGGATGGAGGTTTGACATCG+TGG + chr4_1:65463094-65463113 Msa0564740:intron 50.0%
GGATGGAGGTTTGACATCGT+GGG + chr4_1:65463095-65463114 Msa0564740:intron 50.0%
CCCAAAGATCAAGGTCACGA+TGG + chr4_1:65463187-65463206 Msa0564740:intron 50.0%
GCCATCGTGACCTTGATCTT+TGG - chr4_1:65463191-65463210 None:intergenic 50.0%
AAGGTCACGATGGCTTAAGG+AGG + chr4_1:65463197-65463216 Msa0564740:intron 50.0%
AGGTCACGATGGCTTAAGGA+GGG + chr4_1:65463198-65463217 Msa0564740:intron 50.0%
! AAGGCGCTTAGGGAGAATGA+CGG + chr4_1:65463282-65463301 Msa0564740:intron 50.0%
TAGGGAGAATGACGGTTGGT+TGG + chr4_1:65463290-65463309 Msa0564740:intron 50.0%
!! TTGGTTGGTGTCACCGTTTG+AGG + chr4_1:65463305-65463324 Msa0564740:intron 50.0%
! TGTCACCGTTTGAGGTTCGT+AGG + chr4_1:65463313-65463332 Msa0564740:intron 50.0%
! ACCGTTTGAGGTTCGTAGGA+AGG + chr4_1:65463317-65463336 Msa0564740:intron 50.0%
! GTTTGAGGTTCGTAGGAAGG+TGG + chr4_1:65463320-65463339 Msa0564740:intron 50.0%
! CTACTCATGTAGCGGAGGAT+AGG + chr4_1:65463355-65463374 Msa0564740:intron 50.0%
! TCATGTAGCGGAGGATAGGT+GGG + chr4_1:65463359-65463378 Msa0564740:intron 50.0%
GGTGGCTCCTTTCTCCTTAT+TGG + chr4_1:65463443-65463462 Msa0564740:intron 50.0%
GCGGTTGTGAGAGATAGTGA+TGG + chr4_1:65463474-65463493 Msa0564740:intron 50.0%
! AGTGATGGGGATAAGAGTCC+GGG + chr4_1:65463489-65463508 Msa0564740:intron 50.0%
! TCCCAAAGTGTCATCACCGT+TGG + chr4_1:65463647-65463666 Msa0564740:intron 50.0%
CTCCAACGGTGATGACACTT+TGG - chr4_1:65463652-65463671 None:intergenic 50.0%
AATCGGCGTTCCTTAAGGGT+AGG + chr4_1:65463781-65463800 Msa0564740:intron 50.0%
GTTCCTTAAGGGTAGGCACT+TGG + chr4_1:65463788-65463807 Msa0564740:intron 50.0%
! TGAGAAGGCGTATGATTCGG+TGG + chr4_1:65463893-65463912 Msa0564740:intron 50.0%
!! AGGCGTATGATTCGGTGGAT+TGG + chr4_1:65463898-65463917 Msa0564740:intron 50.0%
!! GGCGTATGATTCGGTGGATT+GGG + chr4_1:65463899-65463918 Msa0564740:intron 50.0%
!! GCGTATGATTCGGTGGATTG+GGG + chr4_1:65463900-65463919 Msa0564740:intron 50.0%
GGTGGGTATGTGTGACAAGT+GGG + chr4_1:65463947-65463966 Msa0564740:intron 50.0%
TCTTGTCAATGGGTGTCCGA+CGG + chr4_1:65464013-65464032 Msa0564740:intron 50.0%
!! TGGGTTGATGAGAAATGCGG+TGG + chr4_1:65464118-65464137 Msa0564740:intron 50.0%
GGAAGGCCCAAGTACTTGAA+AGG - chr4_1:65464400-65464419 None:intergenic 50.0%
AAGTACTTGGGCCTTCCAGT+AGG + chr4_1:65464403-65464422 Msa0564740:intron 50.0%
GAGAGTTAGCACCTACTGGA+AGG - chr4_1:65464417-65464436 None:intergenic 50.0%
CTTCGAGAGTTAGCACCTAC+TGG - chr4_1:65464421-65464440 None:intergenic 50.0%
TTTATGGGGAGGAGTGGAAG+GGG + chr4_1:65464633-65464652 Msa0564740:intron 50.0%
TTGTTGGGTGAAGTGGGAGA+CGG + chr4_1:65464666-65464685 Msa0564740:intron 50.0%
TGACGATGGAGGTTGCTAGA+TGG + chr4_1:65464763-65464782 Msa0564740:intron 50.0%
GACGATGGAGGTTGCTAGAT+GGG + chr4_1:65464764-65464783 Msa0564740:intron 50.0%
GAGGTTGCTAGATGGGAAAG+TGG + chr4_1:65464771-65464790 Msa0564740:intron 50.0%
TGGTACTAGTGTGGAGGGTT+TGG + chr4_1:65464825-65464844 Msa0564740:intron 50.0%
! TTGGTGACCGGAAGGTTTAG+TGG + chr4_1:65464844-65464863 Msa0564740:intron 50.0%
TGCCGAGGTTGTCTTCTCTT+TGG + chr4_1:65464869-65464888 Msa0564740:intron 50.0%
CGAGGTTGTCTTCTCTTTGG+TGG + chr4_1:65464872-65464891 Msa0564740:intron 50.0%
GCTTTCGGAGCAAGTATCCT+AGG + chr4_1:65465016-65465035 Msa0564740:intron 50.0%
CTCAGCGCAAAAGAAGGCTA+AGG + chr4_1:65465050-65465069 Msa0564740:intron 50.0%
AGCGCAAAAGAAGGCTAAGG+TGG + chr4_1:65465053-65465072 Msa0564740:intron 50.0%
GCGCAAAAGAAGGCTAAGGT+GGG + chr4_1:65465054-65465073 Msa0564740:intron 50.0%
AAAGAAGGCTAAGGTGGGAG+AGG + chr4_1:65465059-65465078 Msa0564740:intron 50.0%
GTAGGTGTGGTCTCAGAGTT+AGG + chr4_1:65465081-65465100 Msa0564740:intron 50.0%
TGTGGTCTCAGAGTTAGGCT+TGG + chr4_1:65465086-65465105 Msa0564740:intron 50.0%
TCTCAGAGTTAGGCTTGGAG+TGG + chr4_1:65465091-65465110 Msa0564740:intron 50.0%
!! GGCTTGGAGTGGATTTTCGT+TGG + chr4_1:65465102-65465121 Msa0564740:intron 50.0%
AGGAGGACTTAGAAGGAGTG+CGG + chr4_1:65465172-65465191 Msa0564740:intron 50.0%
AAGCTCGGCATACTTGAGGT+TGG + chr4_1:65465254-65465273 Msa0564740:intron 50.0%
TCGGCATACTTGAGGTTGGA+GGG + chr4_1:65465258-65465277 Msa0564740:intron 50.0%
!! TGAGAAGCTTTGGATGTCCC+CGG + chr4_1:65465329-65465348 Msa0564740:intron 50.0%
TCTAAACCGGGTTCCTACCA+TGG + chr4_1:65465389-65465408 Msa0564740:intron 50.0%
TCGGGAGTTCAACCTTTGTG+TGG + chr4_1:65465441-65465460 Msa0564740:intron 50.0%
CGGGAGTTCAACCTTTGTGT+GGG + chr4_1:65465442-65465461 Msa0564740:intron 50.0%
CGGTGTGGCTCAAGTTAATG+AGG + chr4_1:65465526-65465545 Msa0564740:intron 50.0%
GGTGGATGTTATTGTGGAGG+AGG + chr4_1:65465722-65465741 Msa0564740:intron 50.0%
! AGTGGTGTTGGAACCCTCAA+TGG + chr4_1:65465808-65465827 Msa0564740:intron 50.0%
ACCCTCAATGGTGCCTTAGT+AGG + chr4_1:65465820-65465839 Msa0564740:intron 50.0%
! GACCTACTAAGGCACCATTG+AGG - chr4_1:65465825-65465844 None:intergenic 50.0%
TTTCCTGGCAGCATATCAGC+TGG + chr4_1:65465911-65465930 Msa0564740:intron 50.0%
AAACCAGCTGATATGCTGCC+AGG - chr4_1:65465917-65465936 None:intergenic 50.0%
CCATCACAGAACCAGACCAA+AGG - chr4_1:65466004-65466023 None:intergenic 50.0%
!! CCTTTGGTCTGGTTCTGTGA+TGG + chr4_1:65466001-65466020 Msa0564740:intron 50.0%
CTCTATTGGTGGAGCTGTTC+TGG + chr4_1:65466053-65466072 Msa0564740:intron 50.0%
!!! TGGTTTTGTTGGTTGGGCAG+CGG + chr4_1:65466137-65466156 Msa0564740:intron 50.0%
!! CTGGTGTTACTTCTGCAGCA+GGG + chr4_1:65466161-65466180 Msa0564740:intron 50.0%
GCGCAGCCCAAAAATAACAC+AGG - chr4_1:65466193-65466212 None:intergenic 50.0%
CATATGTATAGGAGGGTGGG+TGG + chr4_1:65466228-65466247 Msa0564740:intron 50.0%
!!! TGTTTTTGGTGGTGACGCAC+TGG + chr4_1:65466273-65466292 Msa0564740:intron 50.0%
GACACACTAATAAGCTCGGG+TGG - chr4_1:65466425-65466444 None:intergenic 50.0%
AACTGGCATACCCTCTCTCT+TGG + chr4_1:65466818-65466837 Msa0564740:intron 50.0%
CCGTTAGTTGTCCAAGAGAG+AGG - chr4_1:65466832-65466851 None:intergenic 50.0%
TGACAATGACTAGGGCCGTT+TGG - chr4_1:65467540-65467559 None:intergenic 50.0%
!! TACGGGTGGACTGCTCATAT+AGG - chr4_1:65468451-65468470 None:intergenic 50.0%
ATATCCCTGAAGGTTACGGG+TGG - chr4_1:65468465-65468484 None:intergenic 50.0%
TAGCCAGGAACTATGCCACT+AGG - chr4_1:65468304-65468323 None:intergenic 50.0%
TGATTCAAGTAGCCTCCCAG+TGG + chr4_1:65468893-65468912 Msa0564740:intron 50.0%
TAGCCAGGAACTATGCCACT+GGG - chr4_1:65468304-65468323 None:intergenic 50.0%
TTAGCCAGGAACTATGCCAC+TGG - chr4_1:65468810-65468829 None:intergenic 50.0%
!! TACGGGTGGACTGTTCATGT+AGG - chr4_1:65469061-65469080 None:intergenic 50.0%
ATATCCCTGAAGGTTACGGG+TGG - chr4_1:65468465-65468484 None:intergenic 50.0%
CAACTTCCTGATGGCAAAGG+CGG - chr4_1:65470175-65470194 None:intergenic 50.0%
TGCCCTTGACCAAGGCTAAA+AGG + chr4_1:65470193-65470212 Msa0564740:CDS 50.0%
CCACGACAGAAACGTCTGAA+TGG - chr4_1:65470255-65470274 None:intergenic 50.0%
CCATTCAGACGTTTCTGTCG+TGG + chr4_1:65470252-65470271 Msa0564740:CDS 50.0%
AGACGTTTCTGTCGTGGTGT+TGG + chr4_1:65470258-65470277 Msa0564740:CDS 50.0%
GACGTTTCTGTCGTGGTGTT+GGG + chr4_1:65470259-65470278 Msa0564740:CDS 50.0%
GGAAGAGGCAGTTCAGAAAG+AGG + chr4_1:65470744-65470763 Msa0564740:CDS 50.0%
! CTTCTTGCTTGCTGCCAACT+GGG - chr4_1:65470877-65470896 None:intergenic 50.0%
! TCTTCTTGCTTGCTGCCAAC+TGG - chr4_1:65470878-65470897 None:intergenic 50.0%
AGTTGGCAGCAAGCAAGAAG+AGG + chr4_1:65470877-65470896 Msa0564740:CDS 50.0%
GTTGGCAGCAAGCAAGAAGA+GGG + chr4_1:65470878-65470897 Msa0564740:CDS 50.0%
!! GGGAGAGCACTACCTAGGTA+AGG + chr4_1:65461922-65461941 Msa0564740:intron 55.0%
!! GGTGGATTCTTTTGGTGGGG+AGG + chr4_1:65462375-65462394 Msa0564740:intron 55.0%
TTTCGCGACTCCCCAATCCA+AGG - chr4_1:65462416-65462435 None:intergenic 55.0%
!! TGTCGGCAAAGAGGCGTCTT+TGG + chr4_1:65462476-65462495 Msa0564740:intron 55.0%
!! GTCGGCAAAGAGGCGTCTTT+GGG + chr4_1:65462477-65462496 Msa0564740:intron 55.0%
CGAGGTGTGTGGTGCATTCT+TGG + chr4_1:65462532-65462551 Msa0564740:intron 55.0%
! TGGTGGGTCGTAGATTCACG+TGG + chr4_1:65462683-65462702 Msa0564740:intron 55.0%
CTACTCACCGCTCTGCCATT+GGG - chr4_1:65462715-65462734 None:intergenic 55.0%
TTTGGGGGGACAATGCGCTT+TGG + chr4_1:65462773-65462792 Msa0564740:intron 55.0%
TTGGGGGGACAATGCGCTTT+GGG + chr4_1:65462774-65462793 Msa0564740:intron 55.0%
GGAACCAAAACGTGTCCGGT+TGG + chr4_1:65462935-65462954 Msa0564740:intron 55.0%
GTATGGAGGAAAGGGTGGAG+AGG + chr4_1:65463034-65463053 Msa0564740:intron 55.0%
GATGAAAAGGGGGAGGATGG+AGG + chr4_1:65463081-65463100 Msa0564740:intron 55.0%
CGCTTAGGGAGAATGACGGT+TGG + chr4_1:65463286-65463305 Msa0564740:intron 55.0%
! CTCATGTAGCGGAGGATAGG+TGG + chr4_1:65463358-65463377 Msa0564740:intron 55.0%
CCACCAAGTGCCTACCCTTA+AGG - chr4_1:65463794-65463813 None:intergenic 55.0%
CCTTAAGGGTAGGCACTTGG+TGG + chr4_1:65463791-65463810 Msa0564740:intron 55.0%
! AAGGGTAGGCACTTGGTGGA+TGG + chr4_1:65463795-65463814 Msa0564740:intron 55.0%
! GCACTTGGTGGATGGAGTGT+TGG + chr4_1:65463803-65463822 Msa0564740:intron 55.0%
GGGTGGGTATGTGTGACAAG+TGG + chr4_1:65463946-65463965 Msa0564740:intron 55.0%
TTATGGGGAGGAGTGGAAGG+GGG + chr4_1:65464634-65464653 Msa0564740:intron 55.0%
!! AGTGTGGAGGGTTTGGTGAC+CGG + chr4_1:65464832-65464851 Msa0564740:intron 55.0%
CGGCACTCCACTAAACCTTC+CGG - chr4_1:65464854-65464873 None:intergenic 55.0%
!! GAAGGTTTAGTGGAGTGCCG+AGG + chr4_1:65464854-65464873 Msa0564740:intron 55.0%
GGTTCAACTCTGGGCTTGAG+CGG + chr4_1:65464935-65464954 Msa0564740:intron 55.0%
TCTGGGCTTGAGCGGAATGT+GGG + chr4_1:65464943-65464962 Msa0564740:intron 55.0%
AAGGCTAAGGTGGGAGAGGT+AGG + chr4_1:65465063-65465082 Msa0564740:intron 55.0%
TAAGGTGGGAGAGGTAGGTG+TGG + chr4_1:65465068-65465087 Msa0564740:intron 55.0%
CGGTAAGCTCGGCATACTTG+AGG + chr4_1:65465250-65465269 Msa0564740:intron 55.0%
CTCGGCATACTTGAGGTTGG+AGG + chr4_1:65465257-65465276 Msa0564740:intron 55.0%
GCGAAAGCCACCACCTTAGA+CGG - chr4_1:65465357-65465376 None:intergenic 55.0%
! CTAAGGTGGTGGCTTTCGCT+TGG + chr4_1:65465358-65465377 Msa0564740:intron 55.0%
GTGATGTTGCTAGTGCGGTG+TGG + chr4_1:65465511-65465530 Msa0564740:intron 55.0%
!! CATTGGGAGTGTTGGCATGG+AGG + chr4_1:65465591-65465610 Msa0564740:intron 55.0%
TCGAGCAATCACCTCCGGAA+GGG - chr4_1:65465849-65465868 None:intergenic 55.0%
ATCGAGCAATCACCTCCGGA+AGG - chr4_1:65465850-65465869 None:intergenic 55.0%
TTCCGGAGGTGATTGCTCGA+TGG + chr4_1:65465849-65465868 Msa0564740:intron 55.0%
AGCCATCGAGCAATCACCTC+CGG - chr4_1:65465854-65465873 None:intergenic 55.0%
GAGGTGATTGCTCGATGGCT+GGG + chr4_1:65465854-65465873 Msa0564740:intron 55.0%
AGGTGATTGCTCGATGGCTG+GGG + chr4_1:65465855-65465874 Msa0564740:intron 55.0%
!!! CAGCTGGTTTTCCTTGGTGC+TGG + chr4_1:65465927-65465946 Msa0564740:intron 55.0%
AACAGTAGCTGCCAGCACCA+AGG - chr4_1:65465941-65465960 None:intergenic 55.0%
!! TGGTGCTGGCAGCTACTGTT+TGG + chr4_1:65465941-65465960 Msa0564740:intron 55.0%
! CTGGCAGCTACTGTTTGGTG+CGG + chr4_1:65465946-65465965 Msa0564740:intron 55.0%
AGCTGTTCTGGTCTGCGGTT+GGG + chr4_1:65466065-65466084 Msa0564740:intron 55.0%
TTTGCTGCGGCTGTTGCAGT+TGG + chr4_1:65466117-65466136 Msa0564740:intron 55.0%
CCTGCTGCAGAAGTAACACC+AGG - chr4_1:65466163-65466182 None:intergenic 55.0%
!! CCTGGTGTTACTTCTGCAGC+AGG + chr4_1:65466160-65466179 Msa0564740:intron 55.0%
TTACTTCTGCAGCAGGGTGC+AGG + chr4_1:65466167-65466186 Msa0564740:intron 55.0%
! GGCTGCGCTTGCTTCTGTTT+TGG + chr4_1:65466205-65466224 Msa0564740:intron 55.0%
ATGTATAGGAGGGTGGGTGG+TGG + chr4_1:65466231-65466250 Msa0564740:intron 55.0%
! TGGTGGCGTCTTGGTGAGTT+TGG + chr4_1:65466248-65466267 Msa0564740:intron 55.0%
! GCACTGGTATGCTCGTGTCT+AGG + chr4_1:65466289-65466308 Msa0564740:intron 55.0%
TGTGTCTTACACGGGCTCGT+TGG + chr4_1:65466439-65466458 Msa0564740:intron 55.0%
CAGTCCACCCGTAACCTTCA+GGG + chr4_1:65468458-65468477 Msa0564740:intron 55.0%
CCAGGAACTATGCCACTAGG+AGG - chr4_1:65468806-65468825 None:intergenic 55.0%
CCTCCTAGTGGCATAGTTCC+TGG + chr4_1:65468803-65468822 Msa0564740:intron 55.0%
ACAGTCCACCCGTAACCTTC+AGG + chr4_1:65469067-65469086 Msa0564740:intron 55.0%
CAGTCCACCCGTAACCTTCA+GGG + chr4_1:65468458-65468477 Msa0564740:intron 55.0%
TACGGGTGGACGGCTCATAT+AGG - chr4_1:65469458-65469477 None:intergenic 55.0%
CCCTGAATGTTACGGGTGGA+CGG - chr4_1:65469468-65469487 None:intergenic 55.0%
CCGTCCACCCGTAACATTCA+GGG + chr4_1:65469465-65469484 Msa0564740:intron 55.0%
GGGCAACTTCCTGATGGCAA+AGG - chr4_1:65470178-65470197 None:intergenic 55.0%
GGTCAAGGGCAACTTCCTGA+TGG - chr4_1:65470184-65470203 None:intergenic 55.0%
CAGGAAGTTGCCCTTGACCA+AGG + chr4_1:65470185-65470204 Msa0564740:CDS 55.0%
! GTTTCTGTCGTGGTGTTGGG+AGG + chr4_1:65470262-65470281 Msa0564740:CDS 55.0%
CGCAGAACATACAGAGCCCA+TGG + chr4_1:65470561-65470580 Msa0564740:CDS 55.0%
CCTACTCACCGCTCTGCCAT+TGG - chr4_1:65462716-65462735 None:intergenic 60.0%
CCAATGGCAGAGCGGTGAGT+AGG + chr4_1:65462713-65462732 Msa0564740:intron 60.0%
!! AAAGGGTGGTGGAGGAGGCT+TGG + chr4_1:65462911-65462930 Msa0564740:intron 60.0%
! GGAGGAGTATGGGGGTATGG+AGG + chr4_1:65463020-65463039 Msa0564740:intron 60.0%
! TGGGGGTATGGAGGAAAGGG+TGG + chr4_1:65463029-65463048 Msa0564740:intron 60.0%
GGAGGAAAGGGTGGAGAGGT+TGG + chr4_1:65463038-65463057 Msa0564740:intron 60.0%
GGAAAGGGTGGAGAGGTTGG+TGG + chr4_1:65463041-65463060 Msa0564740:intron 60.0%
!! AAGGGTGGAGAGGTTGGTGG+AGG + chr4_1:65463044-65463063 Msa0564740:intron 60.0%
TGGGGATAAGAGTCCGGGTC+CGG + chr4_1:65463494-65463513 Msa0564740:intron 60.0%
TGTCAATGGGTGTCCGACGG+AGG + chr4_1:65464016-65464035 Msa0564740:intron 60.0%
!! TGGAGGGTTTGGTGACCGGA+AGG + chr4_1:65464836-65464855 Msa0564740:intron 60.0%
CTCTGGGCTTGAGCGGAATG+TGG + chr4_1:65464942-65464961 Msa0564740:intron 60.0%
GGCGAGGGGAGAGAAGCTTT+CGG + chr4_1:65465001-65465020 Msa0564740:intron 60.0%
GATGTCCCCGGTACCGTCTA+AGG + chr4_1:65465341-65465360 Msa0564740:intron 60.0%
CACCACCTTAGACGGTACCG+GGG - chr4_1:65465349-65465368 None:intergenic 60.0%
CCACCACCTTAGACGGTACC+GGG - chr4_1:65465350-65465369 None:intergenic 60.0%
GCCACCACCTTAGACGGTAC+CGG - chr4_1:65465351-65465370 None:intergenic 60.0%
GCCTTAGTAGGTCCCCCTTC+CGG + chr4_1:65465832-65465851 Msa0564740:intron 60.0%
TCCGGAAGGGGGACCTACTA+AGG - chr4_1:65465836-65465855 None:intergenic 60.0%
TTAGTAGGTCCCCCTTCCGG+AGG + chr4_1:65465835-65465854 Msa0564740:intron 60.0%
GAGCAATCACCTCCGGAAGG+GGG - chr4_1:65465847-65465866 None:intergenic 60.0%
CGAGCAATCACCTCCGGAAG+GGG - chr4_1:65465848-65465867 None:intergenic 60.0%
GGAGGTGATTGCTCGATGGC+TGG + chr4_1:65465853-65465872 Msa0564740:intron 60.0%
ATTGCTCGATGGCTGGGGCT+GGG + chr4_1:65465860-65465879 Msa0564740:intron 60.0%
!!! CTGGGGTGTTTTTGGCGCTG+CGG + chr4_1:65465878-65465897 Msa0564740:intron 60.0%
TTTGGCGCTGCGGCAGTATG+CGG + chr4_1:65465888-65465907 Msa0564740:intron 60.0%
TGCGGCAGTATGCGGTTTCC+TGG + chr4_1:65465896-65465915 Msa0564740:intron 60.0%
GGTGGAGCTGTTCTGGTCTG+CGG + chr4_1:65466060-65466079 Msa0564740:intron 60.0%
GAGCTGTTCTGGTCTGCGGT+TGG + chr4_1:65466064-65466083 Msa0564740:intron 60.0%
CTGCAACAGCCGCAGCAAAC+AGG - chr4_1:65466116-65466135 None:intergenic 60.0%
TATGCAGCCACCAAGGCTCG+TGG + chr4_1:65467212-65467231 Msa0564740:intron 60.0%
GCAGTCCACCCGTAACCTTC+AGG + chr4_1:65468457-65468476 Msa0564740:intron 60.0%
CCAGGAACTATGCCACTGGG+AGG - chr4_1:65468908-65468927 None:intergenic 60.0%
CCTCCCAGTGGCATAGTTCC+TGG + chr4_1:65468905-65468924 Msa0564740:intron 60.0%
GCCGTCCACCCGTAACATTC+AGG + chr4_1:65469464-65469483 Msa0564740:intron 60.0%
GGGAAACCGCCTTTGCCATC+AGG + chr4_1:65470166-65470185 Msa0564740:CDS 60.0%
TTTCCAGCCGGAGTCCCAGT+TGG + chr4_1:65470860-65470879 Msa0564740:intron 60.0%
CTTGCTGCCAACTGGGACTC+CGG - chr4_1:65470870-65470889 None:intergenic 60.0%
!! AGGATAGGTGGGAGCGTCCG+AGG + chr4_1:65463370-65463389 Msa0564740:intron 65.0%
!! TAGGTGGGAGCGTCCGAGGT+TGG + chr4_1:65463374-65463393 Msa0564740:intron 65.0%
!! TGGGAGCGTCCGAGGTTGGA+TGG + chr4_1:65463378-65463397 Msa0564740:intron 65.0%
!! GGGAGCGTCCGAGGTTGGAT+GGG + chr4_1:65463379-65463398 Msa0564740:intron 65.0%
! GGAGCGTCCGAGGTTGGATG+GGG + chr4_1:65463380-65463399 Msa0564740:intron 65.0%
GTCCCCGGTACCGTCTAAGG+TGG + chr4_1:65465344-65465363 Msa0564740:intron 65.0%
! CCCGGTACCGTCTAAGGTGG+TGG + chr4_1:65465347-65465366 Msa0564740:intron 65.0%
GATTGCTCGATGGCTGGGGC+TGG + chr4_1:65465859-65465878 Msa0564740:intron 65.0%
TTGCTCGATGGCTGGGGCTG+GGG + chr4_1:65465861-65465880 Msa0564740:intron 65.0%
!! GGCTGGGGCTGGGGTGTTTT+TGG + chr4_1:65465870-65465889 Msa0564740:intron 65.0%
! TTGTTGGTTGGGCAGCGGCC+TGG + chr4_1:65466142-65466161 Msa0564740:intron 65.0%
GTCAGCACCACGAGCCTTGG+TGG - chr4_1:65467222-65467241 None:intergenic 65.0%
GAGGTCAGCACCACGAGCCT+TGG - chr4_1:65467225-65467244 None:intergenic 65.0%
! TGGTGTTGGGAGGACAGCCC+AGG + chr4_1:65470272-65470291 Msa0564740:CDS 65.0%
!! GGGTGGTGGAGGAGGCTTGG+AGG + chr4_1:65462914-65462933 Msa0564740:intron 70.0%
! GAGGGTGGGTGGTGGCGTCT+TGG + chr4_1:65466239-65466258 Msa0564740:intron 70.0%
CTGCCAACTGGGACTCCGGC+TGG - chr4_1:65470866-65470885 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 65461609 65471151 65461609 ID=Msa0564740;Name=Msa0564740
chr4_1 mRNA 65461609 65471151 65461609 ID=Msa0564740-mRNA-1;Parent=Msa0564740;Name=Msa0564740-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0.8|0.66|0.83|1|1|6|246|161
chr4_1 exon 65461609 65461612 65461609 ID=Msa0564740-mRNA-1:exon:21094;Parent=Msa0564740-mRNA-1
chr4_1 exon 65467219 65467259 65467219 ID=Msa0564740-mRNA-1:exon:21095;Parent=Msa0564740-mRNA-1
chr4_1 exon 65470159 65470389 65470159 ID=Msa0564740-mRNA-1:exon:21096;Parent=Msa0564740-mRNA-1
chr4_1 exon 65470492 65470594 65470492 ID=Msa0564740-mRNA-1:exon:21097;Parent=Msa0564740-mRNA-1
chr4_1 exon 65470698 65470765 65470698 ID=Msa0564740-mRNA-1:exon:21098;Parent=Msa0564740-mRNA-1
chr4_1 exon 65470867 65471151 65470867 ID=Msa0564740-mRNA-1:exon:21099;Parent=Msa0564740-mRNA-1
chr4_1 CDS 65461609 65461612 65461609 ID=Msa0564740-mRNA-1:cds;Parent=Msa0564740-mRNA-1
chr4_1 CDS 65467219 65467259 65467219 ID=Msa0564740-mRNA-1:cds;Parent=Msa0564740-mRNA-1
chr4_1 CDS 65470159 65470389 65470159 ID=Msa0564740-mRNA-1:cds;Parent=Msa0564740-mRNA-1
chr4_1 CDS 65470492 65470594 65470492 ID=Msa0564740-mRNA-1:cds;Parent=Msa0564740-mRNA-1
chr4_1 CDS 65470698 65470765 65470698 ID=Msa0564740-mRNA-1:cds;Parent=Msa0564740-mRNA-1
chr4_1 CDS 65470867 65470905 65470867 ID=Msa0564740-mRNA-1:cds;Parent=Msa0564740-mRNA-1
chr4_1 three_prime_UTR 65470906 65471151 65470906 ID=Msa0564740-mRNA-1:three_prime_utr;Parent=Msa0564740-mRNA-1
Gene Sequence

>Msa0564740

ATGGCCACCAAGGCTCGTGGTGCTGACCTCAGAGTTCATTTCAAGAACACTAGGGAAACCGCCTTTGCCATCAGGAAGTTGCCCTTGACCAAGGCTAAAAGGTACTTGGAAGACGTTCTTGCACACAAACAGGCCATTCCATTCAGACGTTTCTGTCGTGGTGTTGGGAGGACAGCCCAGGCCAAGAATAGACACTCTAATGGACAAGGAAGGTGGCCAGTCAAGTCAGCAAAGTTTATCCTGGATTTGCTGAAGAATGCAGAGAGTAATGCTGAAGTCAAAGGTTTGGATGTTGATGCTCTATATGTTTCACATATCCAAGTCAATCAAGCACAGAAGCAAAGACGCAGAACATACAGAGCCCATGGAAGAATCAACCCTTACATGTCATCTCCTTGCCACATTGAGTTGATTTTATCTGAAAAGGAAGAGGCAGTTCAGAAAGAGCCGGAGTCCCAGTTGGCAGCAAGCAAGAAGAGGGCTTAA
Protein sequence

>Msa0564740

MATKARGADLRVHFKNTRETAFAIRKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPESQLAASKKRA*