AlfalfaGEDB | Msa0568380

M. sativa cultivar zhongmu-4 / Msa0568380

KEGG: K02934
GO: GO:0000027 GO:0002181 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010467 GO:0012505 GO:0015934 GO:0016020 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0022625 GO:0022626 GO:0030054 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042221 GO:0042254 GO:0042255 GO:0042273 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0065003 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF03868.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0568380	ACJ84110.1	99.145	234	2	0	1	234	1	234	5.65e-165	464

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0568380	sp\|P34091\|RL6_MESCR	79.915	234	47	0	1	234	1	234	4.02e-129	367

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0568380	B7FH81	99.145	234	2	0	1	234	1	234	2.70e-165	464

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0086160	Msa0568380	0.823287	1.502445e-53	-8.615850e-47
Msa0114600	Msa0568380	0.830748	2.466088e-55	-8.615850e-47
Msa0419710	Msa0568380	0.805730	1.159222e-49	-8.615850e-47
Msa0433060	Msa0568380	0.824506	7.779513e-54	-8.615850e-47
Msa0450150	Msa0568380	0.831895	1.287671e-55	-8.615850e-47
Msa0270160	Msa0568380	0.810308	1.229481e-50	-8.615850e-47
Msa0277600	Msa0568380	0.847973	8.236092e-60	-8.615850e-47
Msa0524680	Msa0568380	0.825370	4.864488e-54	-8.615850e-47
Msa0547920	Msa0568380	0.828665	7.924899e-55	-8.615850e-47
Msa0552510	Msa0568380	0.816719	4.784297e-52	-8.615850e-47
Msa0564740	Msa0568380	0.843968	1.010644e-58	-8.615850e-47
Msa0568380	Msa0585570	0.859419	4.189578e-63	-8.615850e-47
Msa0568380	Msa0602900	0.834186	3.466495e-56	-8.615850e-47
Msa0568380	Msa0605890	0.817424	3.321469e-52	-8.615850e-47
Msa0568380	Msa0643960	0.832016	1.202105e-55	-8.615850e-47
Msa0568380	Msa0649580	0.807686	4.477679e-50	-8.615850e-47
Msa0568380	Msa0663400	0.857824	1.254634e-62	-8.615850e-47
Msa0568380	Msa0715970	0.856854	2.427612e-62	-8.615850e-47
Msa0568380	Msa0741510	0.802648	5.077444e-49	-8.615850e-47
Msa0568380	Msa0798590	0.824482	7.881054e-54	-8.615850e-47
Msa0568380	Msa0902730	0.834132	3.576541e-56	-8.615850e-47
Msa0568380	Msa0930890	0.817730	2.833638e-52	-8.615850e-47
Msa0568380	Msa1013430	0.847601	1.043266e-59	-8.615850e-47
Msa0568380	Msa1079910	0.804769	1.842529e-49	-8.615850e-47
Msa0568380	Msa1085850	0.815330	9.772227e-52	-8.615850e-47
Msa0568380	Msa1093500	0.839672	1.377132e-57	-8.615850e-47
Msa0568380	Msa1118790	0.806671	7.345920e-50	-8.615850e-47
Msa0568380	Msa1126690	0.801385	9.232314e-49	-8.615850e-47
Msa0568380	Msa1130680	0.803236	3.837963e-49	-8.615850e-47
Msa0568380	Msa1165210	0.800020	1.753268e-48	-8.615850e-47
Msa0568380	Msa1341780	0.823885	1.088451e-53	-8.615850e-47
Msa0568380	Msa1367540	0.843060	1.766913e-58	-8.615850e-47
Msa0568380	Msa1385480	0.801735	7.825776e-49	-8.615850e-47
Msa0568380	Msa1424570	0.814775	1.297170e-51	-8.615850e-47
Msa0568380	Msa1462580	0.862319	5.513205e-64	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0568380	MtrunA17_Chr5g0448021	96.154	234	9	0	1	234	1	234	7.85e-163	449
Msa0568380	MtrunA17_Chr3g0129031	85.897	234	32	1	1	234	1	233	7.16e-145	404
Msa0568380	MtrunA17_Chr3g0129231	85.897	234	32	1	1	234	1	233	1.78e-144	402
Msa0568380	MtrunA17_Chr8g0383131	96.512	172	6	0	1	172	1	172	1.48e-120	341

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0568380	AT1G74050.1	81.466	232	43	3	234	2	233	2.08e-122	347
Msa0568380	AT1G74060.1	80.603	232	45	3	234	2	233	1.06e-120	343
Msa0568380	AT1G18540.1	78.879	232	49	3	234	2	233	7.81e-116	330

Find 83 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTCTTGCCGGTAGATTTA+AGG	0.142019	4_1:+69980672	Msa0568380:CDS
GATGGAACTTGAAGTATTTC+AGG	0.215273	4_1:+69982017	Msa0568380:three_prime_UTR
GCACTTTCTTAACTGTAATA+TGG	0.229052	4_1:+69981746	Msa0568380:three_prime_UTR
CCAATTCCTCTGATCAAATC+AGG	0.248411	4_1:-69980101	None:intergenic
TCATCAGCAGGGTAAAATTT+TGG	0.250055	4_1:-69980245	None:intergenic
CAAGACACTGCCTCGGATAA+AGG	0.271600	4_1:-69981945	None:intergenic
AGCATGCCAAAGGAAAATTT+TGG	0.277279	4_1:+69981861	Msa0568380:three_prime_UTR
TCTGGATTGCTTCTTGTAAC+TGG	0.291952	4_1:+69980727	Msa0568380:CDS
CACGAACTCGTCTTCTAGTT+TGG	0.298877	4_1:+69981660	Msa0568380:exon
ACGGGTACGCAACGCATAAT+AGG	0.315050	4_1:-69982047	None:intergenic
CCTGATTTGATCAGAGGAAT+TGG	0.319315	4_1:+69980101	Msa0568380:CDS
TCAACAGCAGTTTCGGGCTT+AGG	0.337911	4_1:-69980215	None:intergenic
GCAGTTTCGGGCTTAGGTTT+AGG	0.345228	4_1:-69980209	None:intergenic
TCCTTTGAGACGTGTGAATC+AGG	0.346287	4_1:+69981272	Msa0568380:CDS
GAAAGGTATCTGGGCTATTA+AGG	0.349673	4_1:+69980154	Msa0568380:CDS
TGTATCACAAGAAAGGTATC+TGG	0.350934	4_1:+69980144	Msa0568380:CDS
AAGACACTGCCTCGGATAAA+GGG	0.356547	4_1:-69981944	None:intergenic
CTCTGATCAAATCAGGGTTT+CGG	0.358025	4_1:-69980094	None:intergenic
CTTCTTGCCGGTAGATTTAA+GGG	0.364740	4_1:+69980673	Msa0568380:CDS
CCAGACTTGAAGACTTATCT+TGG	0.410256	4_1:+69981603	Msa0568380:CDS
CCAAGATAAGTCTTCAAGTC+TGG	0.428069	4_1:-69981603	None:intergenic
TTGAAAAGTACTTGTCATCA+AGG	0.430348	4_1:-69981350	None:intergenic
ACAGTGCTGATTCTTCTTGC+CGG	0.435264	4_1:+69980661	Msa0568380:CDS
CGAATTCTTTGAGTCAGATA+AGG	0.457015	4_1:+69981407	Msa0568380:CDS
AATAAATCTATGTAATGTAA+TGG	0.457278	4_1:-69979957	None:intergenic
GGCTTCTTCACATCATCAGC+AGG	0.465308	4_1:-69980257	None:intergenic
TGAAGACTTATCTTGGTGCC+AGG	0.466625	4_1:+69981610	Msa0568380:CDS
AAGAAGAATCAGCACTGTGC+CGG	0.476099	4_1:-69980656	None:intergenic
AACACCGGAGATATCGACTT+TGG	0.477360	4_1:-69981316	None:intergenic
TCAGTTCCATCTCAATAAGC+TGG	0.483444	4_1:-69981975	None:intergenic
ACCTGCCTTGAGAGAAAACC+TGG	0.493075	4_1:-69981628	None:intergenic
ATCAGGGTTTCGGCTAACCC+TGG	0.499591	4_1:-69980084	None:intergenic
TGGTCATCTTTCTTCTGCTG+AGG	0.501451	4_1:-69981537	None:intergenic
TCTTCTAGTTTGGAGGAAAG+AGG	0.510621	4_1:+69981670	Msa0568380:exon
ACTGTAATATGGAATTCTGC+TGG	0.512780	4_1:+69981757	Msa0568380:three_prime_UTR
AGAAGAATCAGCACTGTGCC+GGG	0.513749	4_1:-69980655	None:intergenic
CAATTCCTCTGATCAAATCA+GGG	0.517272	4_1:-69980100	None:intergenic
AGGAACTCCGTTGATCTTGA+AGG	0.517314	4_1:-69981253	None:intergenic
ACTGCCTCGGATAAAGGGGC+AGG	0.527197	4_1:-69981939	None:intergenic
TTTGCATTTCGTAGCAGCAA+TGG	0.530175	4_1:+69980040	Msa0568380:exon
CGATATCTCCGGTGTTAATG+TGG	0.532682	4_1:+69981323	Msa0568380:CDS
GTGAATCAGGCCTATGTGAT+TGG	0.535696	4_1:+69981285	Msa0568380:CDS
CTGGGTGCTCTCTGCTTCGT+CGG	0.540977	4_1:-69980065	None:intergenic
TCACAGATGTATCACAAGAA+AGG	0.542107	4_1:+69980137	Msa0568380:CDS
TTCAGGGCAAGCATCACTCC+CGG	0.546234	4_1:+69980637	Msa0568380:intron
CCTCTTGCCCTTAAATCTAC+CGG	0.549567	4_1:-69980680	None:intergenic
GTATCACAAGAAAGGTATCT+GGG	0.554030	4_1:+69980145	Msa0568380:CDS
GAACTCGTCTTCTAGTTTGG+AGG	0.559347	4_1:+69981663	Msa0568380:exon
TAATAACCAGCTTATTGAGA+TGG	0.562966	4_1:+69981969	Msa0568380:three_prime_UTR
CTTCTAGTTTGGAGGAAAGA+GGG	0.566293	4_1:+69981671	Msa0568380:exon
GGCTTATGCTTGTTGCGAAG+AGG	0.566563	4_1:-69980278	None:intergenic
AGCCTAAGCAGACTAAGCTC+AGG	0.567914	4_1:+69980297	Msa0568380:CDS
TCAGGGTTTCGGCTAACCCT+GGG	0.568120	4_1:-69980083	None:intergenic
TCTATGTAATGTAATGGACC+CGG	0.568422	4_1:-69979951	None:intergenic
CGAAACCCTGATTTGATCAG+AGG	0.574541	4_1:+69980095	Msa0568380:CDS
CGGTAGATTTAAGGGCAAGA+GGG	0.577532	4_1:+69980681	Msa0568380:CDS
GCCTGATTCACACGTCTCAA+AGG	0.578175	4_1:-69981273	None:intergenic
GAGTATATATCAGTATTTCA+CGG	0.578413	4_1:-69982136	None:intergenic
TCAACCAAAGTCGATATCTC+CGG	0.580594	4_1:+69981312	Msa0568380:CDS
CCGGTAGATTTAAGGGCAAG+AGG	0.581183	4_1:+69980680	Msa0568380:CDS
ACAATAGCAAAATTGCATGA+AGG	0.581258	4_1:-69981787	None:intergenic
AACCTGAGCTTAGTCTGCTT+AGG	0.583716	4_1:-69980299	None:intergenic
CTTTCACTTGAGCATGCCAA+AGG	0.584843	4_1:+69981851	Msa0568380:three_prime_UTR
GGAACTCCGTTGATCTTGAA+GGG	0.585587	4_1:-69981252	None:intergenic
GGTTGATGTACCAATCACAT+AGG	0.591225	4_1:-69981295	None:intergenic
GACGAAGCAGAGAGCACCCA+GGG	0.611105	4_1:+69980067	Msa0568380:CDS
AACTAGAAGACGAGTTCGTG+TGG	0.615065	4_1:-69981657	None:intergenic
AAGATAGTGTCTGTGTTGTG+TGG	0.616808	4_1:-69979981	None:intergenic
TTATTATCAAGACACTGCCT+CGG	0.622548	4_1:-69981952	None:intergenic
TCAGGTCCCTTCAAGATCAA+CGG	0.623885	4_1:+69981246	Msa0568380:intron
ATTCCCTGCCCCTTTATCCG+AGG	0.628264	4_1:+69981935	Msa0568380:three_prime_UTR
ATTCTTTGAGTCAGATAAGG+AGG	0.630746	4_1:+69981410	Msa0568380:CDS
AGACACTGCCTCGGATAAAG+GGG	0.631456	4_1:-69981943	None:intergenic
TAGATTTAAGGGCAAGAGGG+TGG	0.640763	4_1:+69980684	Msa0568380:CDS
GTTACAAGAAGCAATCCAGA+AGG	0.643198	4_1:-69980724	None:intergenic
CTGCCTCGGATAAAGGGGCA+GGG	0.644015	4_1:-69981938	None:intergenic
CGACGAAGCAGAGAGCACCC+AGG	0.649766	4_1:+69980066	Msa0568380:CDS
CTATGTAATGTAATGGACCC+GGG	0.650162	4_1:-69979950	None:intergenic
GCTTCTTCACATCATCAGCA+GGG	0.669182	4_1:-69980256	None:intergenic
AAGGTTATCCACATTAACAC+CGG	0.677708	4_1:-69981331	None:intergenic
TTAGGTTTAGGATCATGACG+AGG	0.681191	4_1:-69980197	None:intergenic
TAGGTTTAGGATCATGACGA+GGG	0.683516	4_1:-69980196	None:intergenic
GAAAGATGACCAGAAAACAG+TGG	0.686525	4_1:+69981548	Msa0568380:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GTGTTTTATAATTTTTTTAA+TGG	+	chr4_1:69981705-69981724	Msa0568380:three_prime_UTR	10.0%
!!!	GTGTTTTATAATTTTTTTAA+TGG	+	chr4_1:69981705-69981724	Msa0568380:three_prime_UTR	10.0%
!!	AATAAATCTATGTAATGTAA+TGG	-	chr4_1:69979960-69979979	None:intergenic	15.0%
!!!	TACATGATTTTGATATTATT+TGG	+	chr4_1:69980508-69980527	Msa0568380:intron	15.0%
!!!	ACATGATTTTGATATTATTT+GGG	+	chr4_1:69980509-69980528	Msa0568380:intron	15.0%
!!	AATAAATCTATGTAATGTAA+TGG	-	chr4_1:69979960-69979979	None:intergenic	15.0%
!!!	TACATGATTTTGATATTATT+TGG	+	chr4_1:69980508-69980527	Msa0568380:intron	15.0%
!!!	ACATGATTTTGATATTATTT+GGG	+	chr4_1:69980509-69980528	Msa0568380:intron	15.0%
!!!	CAGTTATTCTTATCATTTTA+CGG	+	chr4_1:69980346-69980365	Msa0568380:intron	20.0%
!!	AATATCAAAATCATGTACAA+AGG	-	chr4_1:69980505-69980524	None:intergenic	20.0%
!!!	TTTTGATATTATTTGGGATA+TGG	+	chr4_1:69980515-69980534	Msa0568380:intron	20.0%
!!	AAGATCAGAAATTTAATTGA+TGG	-	chr4_1:69980823-69980842	None:intergenic	20.0%
!!!	TCTTATTCTTTTTATGTACT+AGG	+	chr4_1:69980839-69980858	Msa0568380:intron	20.0%
!!	AAGTATAATTTGAGCTTATT+CGG	-	chr4_1:69981110-69981129	None:intergenic	20.0%
!!!	TGTTTTTTATTTTTGATTGC+AGG	+	chr4_1:69981500-69981519	Msa0568380:intron	20.0%
!!!	TATGAATTTTAGTTATTGTG+AGG	+	chr4_1:69981828-69981847	Msa0568380:three_prime_UTR	20.0%
!!!	CAGTTATTCTTATCATTTTA+CGG	+	chr4_1:69980346-69980365	Msa0568380:intron	20.0%
!!	AATATCAAAATCATGTACAA+AGG	-	chr4_1:69980505-69980524	None:intergenic	20.0%
!!!	TTTTGATATTATTTGGGATA+TGG	+	chr4_1:69980515-69980534	Msa0568380:intron	20.0%
!!	AAGATCAGAAATTTAATTGA+TGG	-	chr4_1:69980823-69980842	None:intergenic	20.0%
!!!	TCTTATTCTTTTTATGTACT+AGG	+	chr4_1:69980839-69980858	Msa0568380:intron	20.0%
!!	AAGTATAATTTGAGCTTATT+CGG	-	chr4_1:69981110-69981129	None:intergenic	20.0%
!!!	TGTTTTTTATTTTTGATTGC+AGG	+	chr4_1:69981500-69981519	Msa0568380:intron	20.0%
!!!	TATGAATTTTAGTTATTGTG+AGG	+	chr4_1:69981828-69981847	Msa0568380:three_prime_UTR	20.0%
!!!	CAACCAGTATTTGTTATTTT+AGG	+	chr4_1:69980474-69980493	Msa0568380:intron	25.0%
!	TCACCTAAAATAACAAATAC+TGG	-	chr4_1:69980480-69980499	None:intergenic	25.0%
!!!	TAATCACTTTTGTTTTGTGT+TGG	+	chr4_1:69980602-69980621	Msa0568380:intron	25.0%
!!!	AATCACTTTTGTTTTGTGTT+GGG	+	chr4_1:69980603-69980622	Msa0568380:intron	25.0%
!!	TTTTTCTTACTTTGCATATC+AGG	+	chr4_1:69981228-69981247	Msa0568380:intron	25.0%
!!!	TATCATTTTTGCCAAGAAAA+AGG	-	chr4_1:69981910-69981929	None:intergenic	25.0%
!!!	ACTTTGATCATTTTTTCAAC+GGG	-	chr4_1:69982068-69982087	None:intergenic	25.0%
!!!	CACTTTGATCATTTTTTCAA+CGG	-	chr4_1:69982069-69982088	None:intergenic	25.0%
!!!	CAACCAGTATTTGTTATTTT+AGG	+	chr4_1:69980474-69980493	Msa0568380:intron	25.0%
!	TCACCTAAAATAACAAATAC+TGG	-	chr4_1:69980480-69980499	None:intergenic	25.0%
!!!	TAATCACTTTTGTTTTGTGT+TGG	+	chr4_1:69980602-69980621	Msa0568380:intron	25.0%
!!!	AATCACTTTTGTTTTGTGTT+GGG	+	chr4_1:69980603-69980622	Msa0568380:intron	25.0%
!!	TTTTTCTTACTTTGCATATC+AGG	+	chr4_1:69981228-69981247	Msa0568380:intron	25.0%
!!!	TATCATTTTTGCCAAGAAAA+AGG	-	chr4_1:69981910-69981929	None:intergenic	25.0%
!!!	ACTTTGATCATTTTTTCAAC+GGG	-	chr4_1:69982068-69982087	None:intergenic	25.0%
!!!	CACTTTGATCATTTTTTCAA+CGG	-	chr4_1:69982069-69982088	None:intergenic	25.0%
!	ACAGTGTTCTTTGTGTTATT+TGG	+	chr4_1:69980416-69980435	Msa0568380:intron	30.0%
!!	CAGTGTTCTTTGTGTTATTT+GGG	+	chr4_1:69980417-69980436	Msa0568380:intron	30.0%
!!	TTTGTGTTATTTGGGATTAC+TGG	+	chr4_1:69980425-69980444	Msa0568380:intron	30.0%
	TTTGTTGCTCTTGATTGATA+AGG	+	chr4_1:69980769-69980788	Msa0568380:intron	30.0%
	AGAAATGTTGACGAGATATA+AGG	+	chr4_1:69980873-69980892	Msa0568380:intron	30.0%
	GAAATGTTGACGAGATATAA+GGG	+	chr4_1:69980874-69980893	Msa0568380:intron	30.0%
!!	CATAAGTTTTGTCACTGTTT+GGG	-	chr4_1:69981051-69981070	None:intergenic	30.0%
!!	ACATAAGTTTTGTCACTGTT+TGG	-	chr4_1:69981052-69981071	None:intergenic	30.0%
	TATTCAATGTTGACATCAGT+TGG	-	chr4_1:69981154-69981173	None:intergenic	30.0%
	GATGTCAACATTGAATATCA+TGG	+	chr4_1:69981157-69981176	Msa0568380:intron	30.0%
!!!	ATGGTGCCTTTTTTTTTAAC+AGG	+	chr4_1:69981176-69981195	Msa0568380:intron	30.0%
!!	TTGAAAAGTACTTGTCATCA+AGG	-	chr4_1:69981353-69981372	None:intergenic	30.0%
!	TGATGACAAGTACTTTTCAA+AGG	+	chr4_1:69981353-69981372	Msa0568380:CDS	30.0%
!!	TTTTTGATTGCAGGAGAAAA+AGG	+	chr4_1:69981509-69981528	Msa0568380:intron	30.0%
	GCACTTTCTTAACTGTAATA+TGG	+	chr4_1:69981746-69981765	Msa0568380:three_prime_UTR	30.0%
	ACAATAGCAAAATTGCATGA+AGG	-	chr4_1:69981790-69981809	None:intergenic	30.0%
!	GATAGATTGTTCCTTTTTCT+TGG	+	chr4_1:69981896-69981915	Msa0568380:three_prime_UTR	30.0%
	TAATAACCAGCTTATTGAGA+TGG	+	chr4_1:69981969-69981988	Msa0568380:three_prime_UTR	30.0%
	GAAAAATTCTTAATGCGAGA+TGG	+	chr4_1:69981999-69982018	Msa0568380:three_prime_UTR	30.0%
!	ACAGTGTTCTTTGTGTTATT+TGG	+	chr4_1:69980416-69980435	Msa0568380:intron	30.0%
!!	CAGTGTTCTTTGTGTTATTT+GGG	+	chr4_1:69980417-69980436	Msa0568380:intron	30.0%
!!	TTTGTGTTATTTGGGATTAC+TGG	+	chr4_1:69980425-69980444	Msa0568380:intron	30.0%
	TTTGTTGCTCTTGATTGATA+AGG	+	chr4_1:69980769-69980788	Msa0568380:intron	30.0%
	AGAAATGTTGACGAGATATA+AGG	+	chr4_1:69980873-69980892	Msa0568380:intron	30.0%
	GAAATGTTGACGAGATATAA+GGG	+	chr4_1:69980874-69980893	Msa0568380:intron	30.0%
!!	CATAAGTTTTGTCACTGTTT+GGG	-	chr4_1:69981051-69981070	None:intergenic	30.0%
!!	ACATAAGTTTTGTCACTGTT+TGG	-	chr4_1:69981052-69981071	None:intergenic	30.0%
	TATTCAATGTTGACATCAGT+TGG	-	chr4_1:69981154-69981173	None:intergenic	30.0%
	GATGTCAACATTGAATATCA+TGG	+	chr4_1:69981157-69981176	Msa0568380:intron	30.0%
!!!	ATGGTGCCTTTTTTTTTAAC+AGG	+	chr4_1:69981176-69981195	Msa0568380:intron	30.0%
!!	TTGAAAAGTACTTGTCATCA+AGG	-	chr4_1:69981353-69981372	None:intergenic	30.0%
!	TGATGACAAGTACTTTTCAA+AGG	+	chr4_1:69981353-69981372	Msa0568380:CDS	30.0%
!!	TTTTTGATTGCAGGAGAAAA+AGG	+	chr4_1:69981509-69981528	Msa0568380:intron	30.0%
	GCACTTTCTTAACTGTAATA+TGG	+	chr4_1:69981746-69981765	Msa0568380:three_prime_UTR	30.0%
	ACAATAGCAAAATTGCATGA+AGG	-	chr4_1:69981790-69981809	None:intergenic	30.0%
!	GATAGATTGTTCCTTTTTCT+TGG	+	chr4_1:69981896-69981915	Msa0568380:three_prime_UTR	30.0%
	TAATAACCAGCTTATTGAGA+TGG	+	chr4_1:69981969-69981988	Msa0568380:three_prime_UTR	30.0%
	GAAAAATTCTTAATGCGAGA+TGG	+	chr4_1:69981999-69982018	Msa0568380:three_prime_UTR	30.0%
!!	TCTATGTAATGTAATGGACC+CGG	-	chr4_1:69979954-69979973	None:intergenic	35.0%
	TTGCACAGACAGAAAAAACT+AGG	+	chr4_1:69980016-69980035	Msa0568380:five_prime_UTR	35.0%
	TGCACAGACAGAAAAAACTA+GGG	+	chr4_1:69980017-69980036	Msa0568380:five_prime_UTR	35.0%
	CAATTCCTCTGATCAAATCA+GGG	-	chr4_1:69980103-69980122	None:intergenic	35.0%
	TCACAGATGTATCACAAGAA+AGG	+	chr4_1:69980137-69980156	Msa0568380:CDS	35.0%
!!	TGTATCACAAGAAAGGTATC+TGG	+	chr4_1:69980144-69980163	Msa0568380:CDS	35.0%
!!	GTATCACAAGAAAGGTATCT+GGG	+	chr4_1:69980145-69980164	Msa0568380:CDS	35.0%
!!	TGGTTTTTCAACAGCAGTTT+CGG	-	chr4_1:69980225-69980244	None:intergenic	35.0%
!	TCATCAGCAGGGTAAAATTT+TGG	-	chr4_1:69980248-69980267	None:intergenic	35.0%
!!!	TTGGGTCTTTTTTGTCTTCA+GGG	+	chr4_1:69980621-69980640	Msa0568380:intron	35.0%
	GTGGTGCCTGTTAAAAAAAA+AGG	-	chr4_1:69981185-69981204	None:intergenic	35.0%
	AAGGTTATCCACATTAACAC+CGG	-	chr4_1:69981334-69981353	None:intergenic	35.0%
!!	TCCCTTGCTTTTCTTTTTTG+GGG	-	chr4_1:69981382-69981401	None:intergenic	35.0%
!!	CTCCCTTGCTTTTCTTTTTT+GGG	-	chr4_1:69981383-69981402	None:intergenic	35.0%
!!	TCTCCCTTGCTTTTCTTTTT+TGG	-	chr4_1:69981384-69981403	None:intergenic	35.0%
	AAAAAGAAAAGCAAGGGAGA+AGG	+	chr4_1:69981384-69981403	Msa0568380:CDS	35.0%
	CGAATTCTTTGAGTCAGATA+AGG	+	chr4_1:69981407-69981426	Msa0568380:CDS	35.0%
	ATTCTTTGAGTCAGATAAGG+AGG	+	chr4_1:69981410-69981429	Msa0568380:CDS	35.0%
	ACTGTAATATGGAATTCTGC+TGG	+	chr4_1:69981757-69981776	Msa0568380:three_prime_UTR	35.0%
!	AGCATGCCAAAGGAAAATTT+TGG	+	chr4_1:69981861-69981880	Msa0568380:three_prime_UTR	35.0%
!	CTGTCTCCAAAATTTTCCTT+TGG	-	chr4_1:69981870-69981889	None:intergenic	35.0%
	TTATTATCAAGACACTGCCT+CGG	-	chr4_1:69981955-69981974	None:intergenic	35.0%
!	GATGGAACTTGAAGTATTTC+AGG	+	chr4_1:69982017-69982036	Msa0568380:three_prime_UTR	35.0%
!!	TCTATGTAATGTAATGGACC+CGG	-	chr4_1:69979954-69979973	None:intergenic	35.0%
	TTGCACAGACAGAAAAAACT+AGG	+	chr4_1:69980016-69980035	Msa0568380:five_prime_UTR	35.0%
	TGCACAGACAGAAAAAACTA+GGG	+	chr4_1:69980017-69980036	Msa0568380:five_prime_UTR	35.0%
	CAATTCCTCTGATCAAATCA+GGG	-	chr4_1:69980103-69980122	None:intergenic	35.0%
	TCACAGATGTATCACAAGAA+AGG	+	chr4_1:69980137-69980156	Msa0568380:CDS	35.0%
!!	TGTATCACAAGAAAGGTATC+TGG	+	chr4_1:69980144-69980163	Msa0568380:CDS	35.0%
!!	GTATCACAAGAAAGGTATCT+GGG	+	chr4_1:69980145-69980164	Msa0568380:CDS	35.0%
!!	TGGTTTTTCAACAGCAGTTT+CGG	-	chr4_1:69980225-69980244	None:intergenic	35.0%
!	TCATCAGCAGGGTAAAATTT+TGG	-	chr4_1:69980248-69980267	None:intergenic	35.0%
!!!	TTGGGTCTTTTTTGTCTTCA+GGG	+	chr4_1:69980621-69980640	Msa0568380:intron	35.0%
	GTGGTGCCTGTTAAAAAAAA+AGG	-	chr4_1:69981185-69981204	None:intergenic	35.0%
	AAGGTTATCCACATTAACAC+CGG	-	chr4_1:69981334-69981353	None:intergenic	35.0%
!!	TCCCTTGCTTTTCTTTTTTG+GGG	-	chr4_1:69981382-69981401	None:intergenic	35.0%
!!	CTCCCTTGCTTTTCTTTTTT+GGG	-	chr4_1:69981383-69981402	None:intergenic	35.0%
!!	TCTCCCTTGCTTTTCTTTTT+TGG	-	chr4_1:69981384-69981403	None:intergenic	35.0%
	AAAAAGAAAAGCAAGGGAGA+AGG	+	chr4_1:69981384-69981403	Msa0568380:CDS	35.0%
	CGAATTCTTTGAGTCAGATA+AGG	+	chr4_1:69981407-69981426	Msa0568380:CDS	35.0%
	ATTCTTTGAGTCAGATAAGG+AGG	+	chr4_1:69981410-69981429	Msa0568380:CDS	35.0%
	ACTGTAATATGGAATTCTGC+TGG	+	chr4_1:69981757-69981776	Msa0568380:three_prime_UTR	35.0%
!	AGCATGCCAAAGGAAAATTT+TGG	+	chr4_1:69981861-69981880	Msa0568380:three_prime_UTR	35.0%
!	CTGTCTCCAAAATTTTCCTT+TGG	-	chr4_1:69981870-69981889	None:intergenic	35.0%
	TTATTATCAAGACACTGCCT+CGG	-	chr4_1:69981955-69981974	None:intergenic	35.0%
!	GATGGAACTTGAAGTATTTC+AGG	+	chr4_1:69982017-69982036	Msa0568380:three_prime_UTR	35.0%
!!	CTATGTAATGTAATGGACCC+GGG	-	chr4_1:69979953-69979972	None:intergenic	40.0%
	AAGATAGTGTCTGTGTTGTG+TGG	-	chr4_1:69979984-69980003	None:intergenic	40.0%
	TTTGCATTTCGTAGCAGCAA+TGG	+	chr4_1:69980040-69980059	Msa0568380:exon	40.0%
	CTCTGATCAAATCAGGGTTT+CGG	-	chr4_1:69980097-69980116	None:intergenic	40.0%
	CCAATTCCTCTGATCAAATC+AGG	-	chr4_1:69980104-69980123	None:intergenic	40.0%
!	CCTGATTTGATCAGAGGAAT+TGG	+	chr4_1:69980101-69980120	Msa0568380:CDS	40.0%
!!	GAAAGGTATCTGGGCTATTA+AGG	+	chr4_1:69980154-69980173	Msa0568380:CDS	40.0%
	TGGGCTATTAAGGCCAAAAA+TGG	+	chr4_1:69980164-69980183	Msa0568380:CDS	40.0%
	GCTATTAAGGCCAAAAATGG+TGG	+	chr4_1:69980167-69980186	Msa0568380:CDS	40.0%
!	TAGGTTTAGGATCATGACGA+GGG	-	chr4_1:69980199-69980218	None:intergenic	40.0%
!	TTAGGTTTAGGATCATGACG+AGG	-	chr4_1:69980200-69980219	None:intergenic	40.0%
!!	GGTTTTTCAACAGCAGTTTC+GGG	-	chr4_1:69980224-69980243	None:intergenic	40.0%
!	TCAGCAGGGTAAAATTTTGG+TGG	-	chr4_1:69980245-69980264	None:intergenic	40.0%
!!!	GTTGGGTCTTTTTTGTCTTC+AGG	+	chr4_1:69980620-69980639	Msa0568380:intron	40.0%
	TCTTCTTGCCGGTAGATTTA+AGG	+	chr4_1:69980672-69980691	Msa0568380:CDS	40.0%
	CTTCTTGCCGGTAGATTTAA+GGG	+	chr4_1:69980673-69980692	Msa0568380:CDS	40.0%
!!!	TTTTTGAAGCAGCTTCCTTC+TGG	+	chr4_1:69980709-69980728	Msa0568380:CDS	40.0%
	GTTACAAGAAGCAATCCAGA+AGG	-	chr4_1:69980727-69980746	None:intergenic	40.0%
	TCTGGATTGCTTCTTGTAAC+TGG	+	chr4_1:69980727-69980746	Msa0568380:CDS	40.0%
!	GGTTGATGTACCAATCACAT+AGG	-	chr4_1:69981298-69981317	None:intergenic	40.0%
	TCAACCAAAGTCGATATCTC+CGG	+	chr4_1:69981312-69981331	Msa0568380:CDS	40.0%
	AGCCCCAAAAAAGAAAAGCA+AGG	+	chr4_1:69981377-69981396	Msa0568380:CDS	40.0%
	GCCCCAAAAAAGAAAAGCAA+GGG	+	chr4_1:69981378-69981397	Msa0568380:CDS	40.0%
	GTTATGCTCATTGCTTCTGT+TGG	+	chr4_1:69981471-69981490	Msa0568380:intron	40.0%
	GAAAGATGACCAGAAAACAG+TGG	+	chr4_1:69981548-69981567	Msa0568380:CDS	40.0%
	CCAAGATAAGTCTTCAAGTC+TGG	-	chr4_1:69981606-69981625	None:intergenic	40.0%
	CCAGACTTGAAGACTTATCT+TGG	+	chr4_1:69981603-69981622	Msa0568380:CDS	40.0%
!!	TCTTCTAGTTTGGAGGAAAG+AGG	+	chr4_1:69981670-69981689	Msa0568380:exon	40.0%
!!	CTTCTAGTTTGGAGGAAAGA+GGG	+	chr4_1:69981671-69981690	Msa0568380:exon	40.0%
	TCAGTTCCATCTCAATAAGC+TGG	-	chr4_1:69981978-69981997	None:intergenic	40.0%
!!	CTATGTAATGTAATGGACCC+GGG	-	chr4_1:69979953-69979972	None:intergenic	40.0%
	AAGATAGTGTCTGTGTTGTG+TGG	-	chr4_1:69979984-69980003	None:intergenic	40.0%
	TTTGCATTTCGTAGCAGCAA+TGG	+	chr4_1:69980040-69980059	Msa0568380:exon	40.0%
	CTCTGATCAAATCAGGGTTT+CGG	-	chr4_1:69980097-69980116	None:intergenic	40.0%
	CCAATTCCTCTGATCAAATC+AGG	-	chr4_1:69980104-69980123	None:intergenic	40.0%
!	CCTGATTTGATCAGAGGAAT+TGG	+	chr4_1:69980101-69980120	Msa0568380:CDS	40.0%
!!	GAAAGGTATCTGGGCTATTA+AGG	+	chr4_1:69980154-69980173	Msa0568380:CDS	40.0%
	TGGGCTATTAAGGCCAAAAA+TGG	+	chr4_1:69980164-69980183	Msa0568380:CDS	40.0%
	GCTATTAAGGCCAAAAATGG+TGG	+	chr4_1:69980167-69980186	Msa0568380:CDS	40.0%
!	TAGGTTTAGGATCATGACGA+GGG	-	chr4_1:69980199-69980218	None:intergenic	40.0%
!	TTAGGTTTAGGATCATGACG+AGG	-	chr4_1:69980200-69980219	None:intergenic	40.0%
!!	GGTTTTTCAACAGCAGTTTC+GGG	-	chr4_1:69980224-69980243	None:intergenic	40.0%
!	TCAGCAGGGTAAAATTTTGG+TGG	-	chr4_1:69980245-69980264	None:intergenic	40.0%
!!!	GTTGGGTCTTTTTTGTCTTC+AGG	+	chr4_1:69980620-69980639	Msa0568380:intron	40.0%
	TCTTCTTGCCGGTAGATTTA+AGG	+	chr4_1:69980672-69980691	Msa0568380:CDS	40.0%
	CTTCTTGCCGGTAGATTTAA+GGG	+	chr4_1:69980673-69980692	Msa0568380:CDS	40.0%
!!!	TTTTTGAAGCAGCTTCCTTC+TGG	+	chr4_1:69980709-69980728	Msa0568380:CDS	40.0%
	GTTACAAGAAGCAATCCAGA+AGG	-	chr4_1:69980727-69980746	None:intergenic	40.0%
	TCTGGATTGCTTCTTGTAAC+TGG	+	chr4_1:69980727-69980746	Msa0568380:CDS	40.0%
!	GGTTGATGTACCAATCACAT+AGG	-	chr4_1:69981298-69981317	None:intergenic	40.0%
	TCAACCAAAGTCGATATCTC+CGG	+	chr4_1:69981312-69981331	Msa0568380:CDS	40.0%
	AGCCCCAAAAAAGAAAAGCA+AGG	+	chr4_1:69981377-69981396	Msa0568380:CDS	40.0%
	GCCCCAAAAAAGAAAAGCAA+GGG	+	chr4_1:69981378-69981397	Msa0568380:CDS	40.0%
	GTTATGCTCATTGCTTCTGT+TGG	+	chr4_1:69981471-69981490	Msa0568380:intron	40.0%
	GAAAGATGACCAGAAAACAG+TGG	+	chr4_1:69981548-69981567	Msa0568380:CDS	40.0%
	CCAAGATAAGTCTTCAAGTC+TGG	-	chr4_1:69981606-69981625	None:intergenic	40.0%
	CCAGACTTGAAGACTTATCT+TGG	+	chr4_1:69981603-69981622	Msa0568380:CDS	40.0%
!!	TCTTCTAGTTTGGAGGAAAG+AGG	+	chr4_1:69981670-69981689	Msa0568380:exon	40.0%
!!	CTTCTAGTTTGGAGGAAAGA+GGG	+	chr4_1:69981671-69981690	Msa0568380:exon	40.0%
	TCAGTTCCATCTCAATAAGC+TGG	-	chr4_1:69981978-69981997	None:intergenic	40.0%
!	CGAAACCCTGATTTGATCAG+AGG	+	chr4_1:69980095-69980114	Msa0568380:CDS	45.0%
!	AGGGAAAACGCCACCATTTT+TGG	-	chr4_1:69980180-69980199	None:intergenic	45.0%
	GCTTCTTCACATCATCAGCA+GGG	-	chr4_1:69980259-69980278	None:intergenic	45.0%
	AACCTGAGCTTAGTCTGCTT+AGG	-	chr4_1:69980302-69980321	None:intergenic	45.0%
	AAGAAGAATCAGCACTGTGC+CGG	-	chr4_1:69980659-69980678	None:intergenic	45.0%
!!	ACAGTGCTGATTCTTCTTGC+CGG	+	chr4_1:69980661-69980680	Msa0568380:CDS	45.0%
	CCTCTTGCCCTTAAATCTAC+CGG	-	chr4_1:69980683-69980702	None:intergenic	45.0%
	CGGTAGATTTAAGGGCAAGA+GGG	+	chr4_1:69980681-69980700	Msa0568380:CDS	45.0%
	TAGATTTAAGGGCAAGAGGG+TGG	+	chr4_1:69980684-69980703	Msa0568380:CDS	45.0%
	TTAACAGGCACCACTTGTCT+TGG	+	chr4_1:69981191-69981210	Msa0568380:intron	45.0%
	TGAAGAGAAGCCAAGACAAG+TGG	-	chr4_1:69981204-69981223	None:intergenic	45.0%
	TCAGGTCCCTTCAAGATCAA+CGG	+	chr4_1:69981246-69981265	Msa0568380:intron	45.0%
	GGAACTCCGTTGATCTTGAA+GGG	-	chr4_1:69981255-69981274	None:intergenic	45.0%
	AGGAACTCCGTTGATCTTGA+AGG	-	chr4_1:69981256-69981275	None:intergenic	45.0%
!!	TCCTTTGAGACGTGTGAATC+AGG	+	chr4_1:69981272-69981291	Msa0568380:CDS	45.0%
	GTGAATCAGGCCTATGTGAT+TGG	+	chr4_1:69981285-69981304	Msa0568380:CDS	45.0%
!!	AACACCGGAGATATCGACTT+TGG	-	chr4_1:69981319-69981338	None:intergenic	45.0%
!	CGATATCTCCGGTGTTAATG+TGG	+	chr4_1:69981323-69981342	Msa0568380:CDS	45.0%
	TGGTCATCTTTCTTCTGCTG+AGG	-	chr4_1:69981540-69981559	None:intergenic	45.0%
!!	TGAAGACTTATCTTGGTGCC+AGG	+	chr4_1:69981610-69981629	Msa0568380:CDS	45.0%
	AACTAGAAGACGAGTTCGTG+TGG	-	chr4_1:69981660-69981679	None:intergenic	45.0%
!	CACGAACTCGTCTTCTAGTT+TGG	+	chr4_1:69981660-69981679	Msa0568380:exon	45.0%
!!	GAACTCGTCTTCTAGTTTGG+AGG	+	chr4_1:69981663-69981682	Msa0568380:exon	45.0%
	CTTTCACTTGAGCATGCCAA+AGG	+	chr4_1:69981851-69981870	Msa0568380:three_prime_UTR	45.0%
	AAGACACTGCCTCGGATAAA+GGG	-	chr4_1:69981947-69981966	None:intergenic	45.0%
!	CGAAACCCTGATTTGATCAG+AGG	+	chr4_1:69980095-69980114	Msa0568380:CDS	45.0%
!	AGGGAAAACGCCACCATTTT+TGG	-	chr4_1:69980180-69980199	None:intergenic	45.0%
	GCTTCTTCACATCATCAGCA+GGG	-	chr4_1:69980259-69980278	None:intergenic	45.0%
	AACCTGAGCTTAGTCTGCTT+AGG	-	chr4_1:69980302-69980321	None:intergenic	45.0%
	AAGAAGAATCAGCACTGTGC+CGG	-	chr4_1:69980659-69980678	None:intergenic	45.0%
!!	ACAGTGCTGATTCTTCTTGC+CGG	+	chr4_1:69980661-69980680	Msa0568380:CDS	45.0%
	CCTCTTGCCCTTAAATCTAC+CGG	-	chr4_1:69980683-69980702	None:intergenic	45.0%
	CGGTAGATTTAAGGGCAAGA+GGG	+	chr4_1:69980681-69980700	Msa0568380:CDS	45.0%
	TAGATTTAAGGGCAAGAGGG+TGG	+	chr4_1:69980684-69980703	Msa0568380:CDS	45.0%
	TTAACAGGCACCACTTGTCT+TGG	+	chr4_1:69981191-69981210	Msa0568380:intron	45.0%
	TGAAGAGAAGCCAAGACAAG+TGG	-	chr4_1:69981204-69981223	None:intergenic	45.0%
	TCAGGTCCCTTCAAGATCAA+CGG	+	chr4_1:69981246-69981265	Msa0568380:intron	45.0%
	GGAACTCCGTTGATCTTGAA+GGG	-	chr4_1:69981255-69981274	None:intergenic	45.0%
	AGGAACTCCGTTGATCTTGA+AGG	-	chr4_1:69981256-69981275	None:intergenic	45.0%
!!	TCCTTTGAGACGTGTGAATC+AGG	+	chr4_1:69981272-69981291	Msa0568380:CDS	45.0%
	GTGAATCAGGCCTATGTGAT+TGG	+	chr4_1:69981285-69981304	Msa0568380:CDS	45.0%
!!	AACACCGGAGATATCGACTT+TGG	-	chr4_1:69981319-69981338	None:intergenic	45.0%
!	CGATATCTCCGGTGTTAATG+TGG	+	chr4_1:69981323-69981342	Msa0568380:CDS	45.0%
	TGGTCATCTTTCTTCTGCTG+AGG	-	chr4_1:69981540-69981559	None:intergenic	45.0%
!!	TGAAGACTTATCTTGGTGCC+AGG	+	chr4_1:69981610-69981629	Msa0568380:CDS	45.0%
	AACTAGAAGACGAGTTCGTG+TGG	-	chr4_1:69981660-69981679	None:intergenic	45.0%
!	CACGAACTCGTCTTCTAGTT+TGG	+	chr4_1:69981660-69981679	Msa0568380:exon	45.0%
!!	GAACTCGTCTTCTAGTTTGG+AGG	+	chr4_1:69981663-69981682	Msa0568380:exon	45.0%
	CTTTCACTTGAGCATGCCAA+AGG	+	chr4_1:69981851-69981870	Msa0568380:three_prime_UTR	45.0%
	AAGACACTGCCTCGGATAAA+GGG	-	chr4_1:69981947-69981966	None:intergenic	45.0%
	GCAGTTTCGGGCTTAGGTTT+AGG	-	chr4_1:69980212-69980231	None:intergenic	50.0%
	TCAACAGCAGTTTCGGGCTT+AGG	-	chr4_1:69980218-69980237	None:intergenic	50.0%
	GGCTTCTTCACATCATCAGC+AGG	-	chr4_1:69980260-69980279	None:intergenic	50.0%
!	GGCTTATGCTTGTTGCGAAG+AGG	-	chr4_1:69980281-69980300	None:intergenic	50.0%
	AGCCTAAGCAGACTAAGCTC+AGG	+	chr4_1:69980297-69980316	Msa0568380:CDS	50.0%
	AGAAGAATCAGCACTGTGCC+GGG	-	chr4_1:69980658-69980677	None:intergenic	50.0%
	CCGGTAGATTTAAGGGCAAG+AGG	+	chr4_1:69980680-69980699	Msa0568380:CDS	50.0%
	GCCTGATTCACACGTCTCAA+AGG	-	chr4_1:69981276-69981295	None:intergenic	50.0%
!	ATGCAGCGTCCACTGTTTTC+TGG	-	chr4_1:69981560-69981579	None:intergenic	50.0%
!!	TGGTGCCAGGTTTTCTCTCA+AGG	+	chr4_1:69981623-69981642	Msa0568380:CDS	50.0%
	ACCTGCCTTGAGAGAAAACC+TGG	-	chr4_1:69981631-69981650	None:intergenic	50.0%
	AGACACTGCCTCGGATAAAG+GGG	-	chr4_1:69981946-69981965	None:intergenic	50.0%
	CAAGACACTGCCTCGGATAA+AGG	-	chr4_1:69981948-69981967	None:intergenic	50.0%
	ACGGGTACGCAACGCATAAT+AGG	-	chr4_1:69982050-69982069	None:intergenic	50.0%
	GCAGTTTCGGGCTTAGGTTT+AGG	-	chr4_1:69980212-69980231	None:intergenic	50.0%
	TCAACAGCAGTTTCGGGCTT+AGG	-	chr4_1:69980218-69980237	None:intergenic	50.0%
	GGCTTCTTCACATCATCAGC+AGG	-	chr4_1:69980260-69980279	None:intergenic	50.0%
!	GGCTTATGCTTGTTGCGAAG+AGG	-	chr4_1:69980281-69980300	None:intergenic	50.0%
	AGCCTAAGCAGACTAAGCTC+AGG	+	chr4_1:69980297-69980316	Msa0568380:CDS	50.0%
	AGAAGAATCAGCACTGTGCC+GGG	-	chr4_1:69980658-69980677	None:intergenic	50.0%
	CCGGTAGATTTAAGGGCAAG+AGG	+	chr4_1:69980680-69980699	Msa0568380:CDS	50.0%
	GCCTGATTCACACGTCTCAA+AGG	-	chr4_1:69981276-69981295	None:intergenic	50.0%
!	ATGCAGCGTCCACTGTTTTC+TGG	-	chr4_1:69981560-69981579	None:intergenic	50.0%
!!	TGGTGCCAGGTTTTCTCTCA+AGG	+	chr4_1:69981623-69981642	Msa0568380:CDS	50.0%
	ACCTGCCTTGAGAGAAAACC+TGG	-	chr4_1:69981631-69981650	None:intergenic	50.0%
	AGACACTGCCTCGGATAAAG+GGG	-	chr4_1:69981946-69981965	None:intergenic	50.0%
	CAAGACACTGCCTCGGATAA+AGG	-	chr4_1:69981948-69981967	None:intergenic	50.0%
	ACGGGTACGCAACGCATAAT+AGG	-	chr4_1:69982050-69982069	None:intergenic	50.0%
	TCAGGGTTTCGGCTAACCCT+GGG	-	chr4_1:69980086-69980105	None:intergenic	55.0%
	ATCAGGGTTTCGGCTAACCC+TGG	-	chr4_1:69980087-69980106	None:intergenic	55.0%
	TTCAGGGCAAGCATCACTCC+CGG	+	chr4_1:69980637-69980656	Msa0568380:intron	55.0%
!	GCCAGGTTTTCTCTCAAGGC+AGG	+	chr4_1:69981627-69981646	Msa0568380:CDS	55.0%
	ATTCCCTGCCCCTTTATCCG+AGG	+	chr4_1:69981935-69981954	Msa0568380:three_prime_UTR	55.0%
	TCAGGGTTTCGGCTAACCCT+GGG	-	chr4_1:69980086-69980105	None:intergenic	55.0%
	ATCAGGGTTTCGGCTAACCC+TGG	-	chr4_1:69980087-69980106	None:intergenic	55.0%
	TTCAGGGCAAGCATCACTCC+CGG	+	chr4_1:69980637-69980656	Msa0568380:intron	55.0%
!	GCCAGGTTTTCTCTCAAGGC+AGG	+	chr4_1:69981627-69981646	Msa0568380:CDS	55.0%
	ATTCCCTGCCCCTTTATCCG+AGG	+	chr4_1:69981935-69981954	Msa0568380:three_prime_UTR	55.0%
	CTGGGTGCTCTCTGCTTCGT+CGG	-	chr4_1:69980068-69980087	None:intergenic	60.0%
!!	GACGAAGCAGAGAGCACCCA+GGG	+	chr4_1:69980067-69980086	Msa0568380:CDS	60.0%
	CTGCCTCGGATAAAGGGGCA+GGG	-	chr4_1:69981941-69981960	None:intergenic	60.0%
	ACTGCCTCGGATAAAGGGGC+AGG	-	chr4_1:69981942-69981961	None:intergenic	60.0%
	CTGGGTGCTCTCTGCTTCGT+CGG	-	chr4_1:69980068-69980087	None:intergenic	60.0%
!!	GACGAAGCAGAGAGCACCCA+GGG	+	chr4_1:69980067-69980086	Msa0568380:CDS	60.0%
	CTGCCTCGGATAAAGGGGCA+GGG	-	chr4_1:69981941-69981960	None:intergenic	60.0%
	ACTGCCTCGGATAAAGGGGC+AGG	-	chr4_1:69981942-69981961	None:intergenic	60.0%
!!	CGACGAAGCAGAGAGCACCC+AGG	+	chr4_1:69980066-69980085	Msa0568380:CDS	65.0%
!!	CGACGAAGCAGAGAGCACCC+AGG	+	chr4_1:69980066-69980085	Msa0568380:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_1	gene	69979950	69982155	69979950	ID=Msa0568380;Name=Msa0568380
chr4_1	mRNA	69979950	69982155	69979950	ID=Msa0568380-mRNA-1;Parent=Msa0568380;Name=Msa0568380-mRNA-1;_AED=0.05;_eAED=0.05;_QI=109\|1\|1\|1\|1\|1\|4\|478\|234
chr4_1	exon	69979950	69980318	69979950	ID=Msa0568380-mRNA-1:exon:23442;Parent=Msa0568380-mRNA-1
chr4_1	exon	69980642	69980748	69980642	ID=Msa0568380-mRNA-1:exon:23443;Parent=Msa0568380-mRNA-1
chr4_1	exon	69981250	69981431	69981250	ID=Msa0568380-mRNA-1:exon:23444;Parent=Msa0568380-mRNA-1
chr4_1	exon	69981522	69982155	69981522	ID=Msa0568380-mRNA-1:exon:23445;Parent=Msa0568380-mRNA-1
chr4_1	five_prime_UTR	69979950	69980058	69979950	ID=Msa0568380-mRNA-1:five_prime_utr;Parent=Msa0568380-mRNA-1
chr4_1	CDS	69980059	69980318	69980059	ID=Msa0568380-mRNA-1:cds;Parent=Msa0568380-mRNA-1
chr4_1	CDS	69980642	69980748	69980642	ID=Msa0568380-mRNA-1:cds;Parent=Msa0568380-mRNA-1
chr4_1	CDS	69981250	69981431	69981250	ID=Msa0568380-mRNA-1:cds;Parent=Msa0568380-mRNA-1
chr4_1	CDS	69981522	69981677	69981522	ID=Msa0568380-mRNA-1:cds;Parent=Msa0568380-mRNA-1
chr4_1	three_prime_UTR	69981678	69982155	69981678	ID=Msa0568380-mRNA-1:three_prime_utr;Parent=Msa0568380-mRNA-1

Gene Sequence

>Msa0568380

ATGGCGCCGACGAAGCAGAGAGCACCCAGGGTTAGCCGAAACCCTGATTTGATCAGAGGAATTGGAAAGTTCTCAAAGTCACAGATGTATCACAAGAAAGGTATCTGGGCTATTAAGGCCAAAAATGGTGGCGTTTTCCCTCGTCATGATCCTAAACCTAAGCCCGAAACTGCTGTTGAAAAACCACCAAAATTTTACCCTGCTGATGATGTGAAGAAGCCTCTTCGCAACAAGCATAAGCCTAAGCAGACTAAGCTCAGGGCAAGCATCACTCCCGGCACAGTGCTGATTCTTCTTGCCGGTAGATTTAAGGGCAAGAGGGTGGTGTTTTTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTAACTGGTCCCTTCAAGATCAACGGAGTTCCTTTGAGACGTGTGAATCAGGCCTATGTGATTGGTACATCAACCAAAGTCGATATCTCCGGTGTTAATGTGGATAACCTTGATGACAAGTACTTTTCAAAGGAAGCCCCAAAAAAGAAAAGCAAGGGAGAAGGCGAATTCTTTGAGTCAGATAAGGAGGAGAAAAAGGCGTTACCTCAGCAGAAGAAAGATGACCAGAAAACAGTGGACGCTGCATTGATAAAAGCTATTGAGAGCGTTCCAGACTTGAAGACTTATCTTGGTGCCAGGTTTTCTCTCAAGGCAGGTGTGAAGCCACACGAACTCGTCTTCTAG

Protein sequence

>Msa0568380

MAPTKQRAPRVSRNPDLIRGIGKFSKSQMYHKKGIWAIKAKNGGVFPRHDPKPKPETAVEKPPKFYPADDVKKPLRNKHKPKQTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVNVDNLDDKYFSKEAPKKKSKGEGEFFESDKEEKKALPQQKKDDQKTVDAALIKAIESVPDLKTYLGARFSLKAGVKPHELVF*