Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585570 | XP_003604229.1 | 95.745 | 141 | 2 | 1 | 19 | 155 | 4 | 144 | 2.45e-90 | 269 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585570 | sp|Q9XHS0|RS12_HORVU | 72.593 | 135 | 32 | 2 | 25 | 155 | 10 | 143 | 2.78e-64 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028150 | Msa0585570 | 0.821088 | 4.862590e-53 | -8.615850e-47 |
| Msa0075730 | Msa0585570 | 0.820398 | 7.006747e-53 | -8.615850e-47 |
| Msa0086160 | Msa0585570 | 0.880319 | 6.054722e-70 | -8.615850e-47 |
| Msa0087910 | Msa0585570 | 0.812283 | 4.583220e-51 | -8.615850e-47 |
| Msa0114600 | Msa0585570 | 0.892373 | 1.685154e-74 | -8.615850e-47 |
| Msa0123290 | Msa0585570 | 0.841710 | 4.028169e-58 | -8.615850e-47 |
| Msa0123790 | Msa0585570 | 0.813599 | 2.359045e-51 | -8.615850e-47 |
| Msa0128330 | Msa0585570 | 0.829737 | 4.355160e-55 | -8.615850e-47 |
| Msa0132460 | Msa0585570 | 0.829728 | 4.376733e-55 | -8.615850e-47 |
| Msa0134580 | Msa0585570 | 0.818121 | 2.312859e-52 | -8.615850e-47 |
| Msa0167860 | Msa0585570 | 0.825992 | 3.463360e-54 | -8.615850e-47 |
| Msa0174580 | Msa0585570 | 0.839358 | 1.662639e-57 | -8.615850e-47 |
| Msa0182050 | Msa0585570 | 0.827972 | 1.164303e-54 | -8.615850e-47 |
| Msa0182100 | Msa0585570 | 0.839764 | 1.303317e-57 | -8.615850e-47 |
| Msa0192300 | Msa0585570 | 0.810833 | 9.467667e-51 | -8.615850e-47 |
| Msa0192490 | Msa0585570 | 0.804876 | 1.750050e-49 | -8.615850e-47 |
| Msa0223240 | Msa0585570 | 0.809547 | 1.792517e-50 | -8.615850e-47 |
| Msa0225350 | Msa0585570 | 0.808801 | 2.591239e-50 | -8.615850e-47 |
| Msa0377370 | Msa0585570 | 0.827254 | 1.731517e-54 | -8.615850e-47 |
| Msa0419710 | Msa0585570 | 0.858005 | 1.108337e-62 | -8.615850e-47 |
| Msa0426250 | Msa0585570 | 0.806550 | 7.790555e-50 | -8.615850e-47 |
| Msa0426940 | Msa0585570 | 0.803830 | 2.891332e-49 | -8.615850e-47 |
| Msa0433060 | Msa0585570 | 0.878500 | 2.670464e-69 | -8.615850e-47 |
| Msa0450150 | Msa0585570 | 0.895004 | 1.445899e-75 | -8.615850e-47 |
| Msa0468440 | Msa0585570 | 0.822037 | 2.934001e-53 | -8.615850e-47 |
| Msa0270160 | Msa0585570 | 0.835412 | 1.703930e-56 | -8.615850e-47 |
| Msa0277600 | Msa0585570 | 0.885263 | 9.449779e-72 | -8.615850e-47 |
| Msa0301250 | Msa0585570 | 0.807932 | 3.970508e-50 | -8.615850e-47 |
| Msa0313060 | Msa0585570 | 0.843868 | 1.075460e-58 | -8.615850e-47 |
| Msa0315430 | Msa0585570 | 0.821990 | 3.009880e-53 | -8.615850e-47 |
| Msa0521730 | Msa0585570 | 0.806916 | 6.518517e-50 | -8.615850e-47 |
| Msa0524680 | Msa0585570 | 0.877714 | 5.033858e-69 | -8.615850e-47 |
| Msa0529900 | Msa0585570 | 0.841694 | 4.068433e-58 | -8.615850e-47 |
| Msa0547920 | Msa0585570 | 0.840379 | 9.009913e-58 | -8.615850e-47 |
| Msa0564740 | Msa0585570 | 0.806324 | 8.691776e-50 | -8.615850e-47 |
| Msa0568380 | Msa0585570 | 0.859419 | 4.189578e-63 | -8.615850e-47 |
| Msa0573550 | Msa0585570 | 0.851011 | 1.171275e-60 | -8.615850e-47 |
| Msa0574780 | Msa0585570 | 0.801202 | 1.006224e-48 | -8.615850e-47 |
| Msa0585570 | Msa0601130 | 0.810823 | 9.515319e-51 | -8.615850e-47 |
| Msa0585570 | Msa0602900 | 0.843675 | 1.211078e-58 | -8.615850e-47 |
| Msa0585570 | Msa0605890 | 0.826031 | 3.390154e-54 | -8.615850e-47 |
| Msa0585570 | Msa0643960 | 0.843772 | 1.140836e-58 | -8.615850e-47 |
| Msa0585570 | Msa0663400 | 0.997733 | 4.174295e-248 | -8.615850e-47 |
| Msa0585570 | Msa0694400 | 0.821245 | 4.472844e-53 | -8.615850e-47 |
| Msa0585570 | Msa0704860 | 0.814884 | 1.227405e-51 | -8.615850e-47 |
| Msa0585570 | Msa0708630 | 0.830818 | 2.369859e-55 | -8.615850e-47 |
| Msa0585570 | Msa0715970 | 0.866107 | 3.630228e-65 | -8.615850e-47 |
| Msa0585570 | Msa0718560 | 0.811649 | 6.297909e-51 | -8.615850e-47 |
| Msa0585570 | Msa0749000 | 0.855853 | 4.774637e-62 | -8.615850e-47 |
| Msa0585570 | Msa0790450 | 0.807749 | 4.341839e-50 | -8.615850e-47 |
| Msa0585570 | Msa0796490 | 0.871776 | 5.281007e-67 | -8.615850e-47 |
| Msa0585570 | Msa0798590 | 0.813439 | 2.558068e-51 | -8.615850e-47 |
| Msa0585570 | Msa0902730 | 0.845349 | 4.293467e-59 | -8.615850e-47 |
| Msa0585570 | Msa0929700 | 0.840447 | 8.648433e-58 | -8.615850e-47 |
| Msa0585570 | Msa0930100 | 0.814404 | 1.567596e-51 | -8.615850e-47 |
| Msa0585570 | Msa0930890 | 0.858290 | 9.120387e-63 | -8.615850e-47 |
| Msa0585570 | Msa1004780 | 0.818651 | 1.754020e-52 | -8.615850e-47 |
| Msa0585570 | Msa1013430 | 0.853583 | 2.170967e-61 | -8.615850e-47 |
| Msa0585570 | Msa1031740 | 0.833424 | 5.375343e-56 | -8.615850e-47 |
| Msa0585570 | Msa1066350 | 0.806292 | 8.830974e-50 | -8.615850e-47 |
| Msa0585570 | Msa1070810 | 0.824505 | 7.784825e-54 | -8.615850e-47 |
| Msa0585570 | Msa1085850 | 0.870702 | 1.195468e-66 | -8.615850e-47 |
| Msa0585570 | Msa1093500 | 0.832788 | 7.739178e-56 | -8.615850e-47 |
| Msa0585570 | Msa1118790 | 0.851375 | 9.244878e-61 | -8.615850e-47 |
| Msa0585570 | Msa1126690 | 0.816978 | 4.184049e-52 | -8.615850e-47 |
| Msa0585570 | Msa1130680 | 0.839180 | 1.848706e-57 | -8.615850e-47 |
| Msa0585570 | Msa1144610 | 0.828985 | 6.631067e-55 | -8.615850e-47 |
| Msa0585570 | Msa1158630 | 0.823104 | 1.657400e-53 | -8.615850e-47 |
| Msa0585570 | Msa1165210 | 0.827788 | 1.289112e-54 | -8.615850e-47 |
| Msa0585570 | Msa1219760 | 0.803326 | 3.677781e-49 | -8.615850e-47 |
| Msa0585570 | Msa1255830 | 0.806351 | 8.579091e-50 | -8.615850e-47 |
| Msa0585570 | Msa1296090 | 0.803083 | 4.129227e-49 | -8.615850e-47 |
| Msa0585570 | Msa1330730 | 0.828145 | 1.058083e-54 | -8.615850e-47 |
| Msa0585570 | Msa1341780 | 0.854383 | 1.276908e-61 | -8.615850e-47 |
| Msa0585570 | Msa1351020 | 0.856291 | 3.553242e-62 | -8.615850e-47 |
| Msa0585570 | Msa1351910 | 0.819838 | 9.409316e-53 | -8.615850e-47 |
| Msa0585570 | Msa1353300 | 0.821524 | 3.857860e-53 | -8.615850e-47 |
| Msa0585570 | Msa1367540 | 0.847989 | 8.157422e-60 | -8.615850e-47 |
| Msa0585570 | Msa1385480 | 0.845242 | 4.589573e-59 | -8.615850e-47 |
| Msa0585570 | Msa1407550 | 0.800299 | 1.538086e-48 | -8.615850e-47 |
| Msa0585570 | Msa1424570 | 0.817225 | 3.682272e-52 | -8.615850e-47 |
| Msa0585570 | Msa1432310 | 0.822093 | 2.848500e-53 | -8.615850e-47 |
| Msa0585570 | Msa1444680 | 0.808005 | 3.830922e-50 | -8.615850e-47 |
| Msa0585570 | Msa1446410 | 0.801273 | 9.733324e-49 | -8.615850e-47 |
| Msa0585570 | Msa1450560 | 0.805157 | 1.528663e-49 | -8.615850e-47 |
| Msa0585570 | Msa1462580 | 0.845747 | 3.348610e-59 | -8.615850e-47 |
| Msa0585570 | Msa1463570 | 0.816580 | 5.138891e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585570 | MtrunA17_Chr4g0001281 | 95.745 | 141 | 2 | 1 | 19 | 155 | 4 | 144 | 2.26e-94 | 269 |
| Msa0585570 | MtrunA17_Chr5g0399411 | 92.000 | 125 | 6 | 1 | 35 | 155 | 18 | 142 | 1.01e-79 | 232 |
| Msa0585570 | MtrunA17_Chr8g0384331 | 88.095 | 126 | 11 | 1 | 34 | 155 | 18 | 143 | 1.91e-77 | 226 |
| Msa0585570 | MtrunA17_Chr4g0037191 | 66.265 | 83 | 13 | 1 | 1 | 68 | 21 | 103 | 8.18e-30 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585570 | AT2G32060.3 | 69.600 | 125 | 33 | 2 | 35 | 155 | 21 | 144 | 5.51e-59 | 180 |
| Msa0585570 | AT2G32060.1 | 69.600 | 125 | 33 | 2 | 35 | 155 | 21 | 144 | 5.51e-59 | 180 |
| Msa0585570 | AT2G32060.2 | 69.600 | 125 | 33 | 2 | 35 | 155 | 21 | 144 | 5.51e-59 | 180 |
| Msa0585570 | AT1G15930.1 | 71.200 | 125 | 31 | 2 | 35 | 155 | 21 | 144 | 3.66e-58 | 178 |
| Msa0585570 | AT1G15930.2 | 71.200 | 125 | 31 | 2 | 35 | 155 | 21 | 144 | 3.66e-58 | 178 |
Find 49 sgRNAs with CRISPR-Local
Find 490 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGGCCGTGGTCAGGATTT+TGG | 0.169284 | 4_2:+6531848 | Msa0585570:intron |
| CTTCTAGTTGGTGTTATCTA+AGG | 0.245010 | 4_2:+6531992 | Msa0585570:three_prime_UTR |
| ACAAAAGTGATTAACTAAAT+TGG | 0.262326 | 4_2:-6532064 | None:intergenic |
| CCTGTTGCCGCCCCTGCTGC+TGG | 0.273301 | 4_2:+6531046 | Msa0585570:CDS |
| GCCCCTGCTGCTGGAATTCC+AGG | 0.275871 | 4_2:+6531055 | Msa0585570:CDS |
| ATGGAGATTCTTACTGTTTG+TGG | 0.343710 | 4_2:-6529471 | None:intergenic |
| CCAGCAGCAGGGGCGGCAAC+AGG | 0.352403 | 4_2:-6531046 | None:intergenic |
| TCGCCTGGAATTCCAGCAGC+AGG | 0.403859 | 4_2:-6531058 | None:intergenic |
| ATGATATCCATTGGCTCGCC+TGG | 0.406108 | 4_2:-6531073 | None:intergenic |
| CTGTGCAAAGTTCCTTTGTA+TGG | 0.406738 | 4_2:+6532136 | Msa0585570:three_prime_UTR |
| TGCGAAGACACTTGGAGAAT+GGG | 0.446345 | 4_2:+6531294 | Msa0585570:CDS |
| TTGACGAGTTTAACATAGTC+AGG | 0.447855 | 4_2:-6531226 | None:intergenic |
| GTGCGAAGACACTTGGAGAA+TGG | 0.457537 | 4_2:+6531293 | Msa0585570:CDS |
| CTGCTCCTGTGTGGTGGTCA+AGG | 0.470678 | 4_2:+6531753 | Msa0585570:CDS |
| GTGCTGCAGAACAACATTGT+AGG | 0.480720 | 4_2:-6531885 | None:intergenic |
| CTGCCTTGCAACTTGTGCTT+AGG | 0.487542 | 4_2:+6531098 | Msa0585570:CDS |
| GGAAAAGCTAGGAAGGTAAC+TGG | 0.499679 | 4_2:+6531730 | Msa0585570:CDS |
| CGCCTGGAATTCCAGCAGCA+GGG | 0.501362 | 4_2:-6531057 | None:intergenic |
| CTTGCACGTGGCCTCCATGA+AGG | 0.502412 | 4_2:+6531142 | Msa0585570:CDS |
| GTTCCTAGTGCGAAGACACT+TGG | 0.512562 | 4_2:+6531286 | Msa0585570:CDS |
| TCTCCAAGTGTCTTCGCACT+AGG | 0.516396 | 4_2:-6531289 | None:intergenic |
| CTTAGGAAGTCACTGGCATA+TGG | 0.527492 | 4_2:+6531115 | Msa0585570:CDS |
| TGGAATTCCAGCAGCAGGGG+CGG | 0.535141 | 4_2:-6531053 | None:intergenic |
| GCCTGGAATTCCAGCAGCAG+GGG | 0.541122 | 4_2:-6531056 | None:intergenic |
| CGAGTTTAACATAGTCAGGC+TGG | 0.546098 | 4_2:-6531222 | None:intergenic |
| AGGAAGTCACTGGCATATGG+TGG | 0.559341 | 4_2:+6531118 | Msa0585570:CDS |
| AACTGGCTGCTCCTGTGTGG+TGG | 0.564611 | 4_2:+6531747 | Msa0585570:CDS |
| AGAAGCAAAATTCATTCTCA+AGG | 0.566617 | 4_2:-6531974 | None:intergenic |
| CTCACTGAACTCAACGCCGC+CGG | 0.569077 | 4_2:+6529432 | Msa0585570:CDS |
| AAGGCAGTCATGATATCCAT+TGG | 0.578468 | 4_2:-6531082 | None:intergenic |
| ACTTGTGCTTAGGAAGTCAC+TGG | 0.586574 | 4_2:+6531108 | Msa0585570:CDS |
| CTCCGAGGGAAAAGCTAGGA+AGG | 0.586953 | 4_2:+6531723 | Msa0585570:CDS |
| TGGAATTCCAGGCGAGCCAA+TGG | 0.589710 | 4_2:+6531066 | Msa0585570:CDS |
| ACGCCGCCGGAGTTCTTCGT+CGG | 0.592254 | 4_2:+6529445 | Msa0585570:CDS |
| TGGCTGCCGACGAAGAACTC+CGG | 0.602640 | 4_2:-6529451 | None:intergenic |
| CTTCCTAAGCACAAGTTGCA+AGG | 0.603957 | 4_2:-6531101 | None:intergenic |
| TGACTATGTTAAACTCGTCA+AGG | 0.611176 | 4_2:+6531228 | Msa0585570:CDS |
| GCATATGGTGGGCTTGCACG+TGG | 0.612030 | 4_2:+6531130 | Msa0585570:CDS |
| GGAAGTCACTGGCATATGGT+GGG | 0.612935 | 4_2:+6531119 | Msa0585570:CDS |
| AAGACACTTGGAGAATGGGC+TGG | 0.622300 | 4_2:+6531298 | Msa0585570:CDS |
| TTGACTCCGAGGGAAAAGCT+AGG | 0.623449 | 4_2:+6531719 | Msa0585570:CDS |
| GGTAACTGGCTGCTCCTGTG+TGG | 0.642490 | 4_2:+6531744 | Msa0585570:CDS |
| AAAGTAATTGAGAAGAACAC+AGG | 0.649204 | 4_2:+6531169 | Msa0585570:intron |
| TTGTGTAAGATTGACTCCGA+GGG | 0.654398 | 4_2:+6531709 | Msa0585570:CDS |
| CTGCCGACGAAGAACTCCGG+CGG | 0.657958 | 4_2:-6529448 | None:intergenic |
| AATGTCACGGTACCATACAA+AGG | 0.661583 | 4_2:-6532148 | None:intergenic |
| GTTGTGTAAGATTGACTCCG+AGG | 0.676451 | 4_2:+6531708 | Msa0585570:intron |
| ACTTCAGTGACATAATGTCA+CGG | 0.679250 | 4_2:-6532161 | None:intergenic |
| TTATACCTTGACCACCACAC+AGG | 0.686928 | 4_2:-6531758 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAATTTATTAAATTATT+GGG | - | chr4_2:6529206-6529225 | None:intergenic | 0.0% |
| !!! | TTTTAAATTTATTAAATTAT+TGG | - | chr4_2:6529207-6529226 | None:intergenic | 0.0% |
| !! | TTTAAATTTATTAAATTATT+GGG | - | chr4_2:6529206-6529225 | None:intergenic | 0.0% |
| !!! | TTTTAAATTTATTAAATTAT+TGG | - | chr4_2:6529207-6529226 | None:intergenic | 0.0% |
| !!! | AAAGTTTTTTGTTAATAATA+CGG | + | chr4_2:6529249-6529268 | Msa0585570:intron | 10.0% |
| !!! | TTTTGTTTATTTAATTTGAT+TGG | + | chr4_2:6529714-6529733 | Msa0585570:intron | 10.0% |
| !!! | AAAGTTTTTTGTTAATAATA+CGG | + | chr4_2:6529249-6529268 | Msa0585570:intron | 10.0% |
| !!! | TTTTGTTTATTTAATTTGAT+TGG | + | chr4_2:6529714-6529733 | Msa0585570:intron | 10.0% |
| !!! | TATTTTACTTCTATAGTTTA+AGG | - | chr4_2:6528357-6528376 | None:intergenic | 15.0% |
| !!! | TTAAATTTAAGTTATAGAGA+AGG | + | chr4_2:6529030-6529049 | Msa0585570:intron | 15.0% |
| !!! | AAGTTTTTTGTTAATAATAC+GGG | + | chr4_2:6529250-6529269 | Msa0585570:intron | 15.0% |
| !!! | GTTGAATATGAATTTTAATA+CGG | + | chr4_2:6529628-6529647 | Msa0585570:intron | 15.0% |
| !!! | CAAGATTCTAAAAAAAAATA+TGG | - | chr4_2:6530456-6530475 | None:intergenic | 15.0% |
| !!! | TTTGTTGTATTAATTATTGT+TGG | + | chr4_2:6531672-6531691 | Msa0585570:intron | 15.0% |
| !!! | TATTTTACTTCTATAGTTTA+AGG | - | chr4_2:6528357-6528376 | None:intergenic | 15.0% |
| !!! | TTAAATTTAAGTTATAGAGA+AGG | + | chr4_2:6529030-6529049 | Msa0585570:intron | 15.0% |
| !!! | AAGTTTTTTGTTAATAATAC+GGG | + | chr4_2:6529250-6529269 | Msa0585570:intron | 15.0% |
| !!! | GTTGAATATGAATTTTAATA+CGG | + | chr4_2:6529628-6529647 | Msa0585570:intron | 15.0% |
| !!! | CAAGATTCTAAAAAAAAATA+TGG | - | chr4_2:6530456-6530475 | None:intergenic | 15.0% |
| !!! | TTTGTTGTATTAATTATTGT+TGG | + | chr4_2:6531672-6531691 | Msa0585570:intron | 15.0% |
| !! | TTGAATGATTACAATAAAGA+AGG | + | chr4_2:6528400-6528419 | Msa0585570:intron | 20.0% |
| !! | AATGAGTCAAAGATTTATAA+GGG | - | chr4_2:6528558-6528577 | None:intergenic | 20.0% |
| !! | TAATGAGTCAAAGATTTATA+AGG | - | chr4_2:6528559-6528578 | None:intergenic | 20.0% |
| !! | GAAGAATATGTATAATTAGT+GGG | - | chr4_2:6528639-6528658 | None:intergenic | 20.0% |
| !! | AGAAGAATATGTATAATTAG+TGG | - | chr4_2:6528640-6528659 | None:intergenic | 20.0% |
| !! | AAAATCAATGGAAGAATAAA+TGG | + | chr4_2:6528687-6528706 | Msa0585570:intron | 20.0% |
| !! | AAATCAATGGAAGAATAAAT+GGG | + | chr4_2:6528688-6528707 | Msa0585570:intron | 20.0% |
| !!! | TCAAAAGGAATTTGTTAAAA+AGG | + | chr4_2:6528749-6528768 | Msa0585570:intron | 20.0% |
| !!! | GGCAATTGTTTTTTTTTTTT+TGG | + | chr4_2:6528815-6528834 | Msa0585570:intron | 20.0% |
| !!! | AGTTTTTTGTTAATAATACG+GGG | + | chr4_2:6529251-6529270 | Msa0585570:intron | 20.0% |
| !! | ATTATATTAGGAATATAGGT+GGG | + | chr4_2:6529274-6529293 | Msa0585570:intron | 20.0% |
| !!! | TAAAGTATTGAAAAACTGAA+AGG | - | chr4_2:6529506-6529525 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTTTTTTTGTGC+AGG | + | chr4_2:6529542-6529561 | Msa0585570:intron | 20.0% |
| !!! | TATGAATTTTAATACGGATA+TGG | + | chr4_2:6529634-6529653 | Msa0585570:intron | 20.0% |
| !!! | GTAAAGAGACATAATTTTAT+TGG | + | chr4_2:6529741-6529760 | Msa0585570:intron | 20.0% |
| !!! | CAGAATATTGTTAATTTGAT+TGG | + | chr4_2:6529776-6529795 | Msa0585570:intron | 20.0% |
| !! | CAAAAAAAAAAACGACATAA+GGG | - | chr4_2:6530235-6530254 | None:intergenic | 20.0% |
| !! | ACAAAAAAAAAAACGACATA+AGG | - | chr4_2:6530236-6530255 | None:intergenic | 20.0% |
| !!! | TTATGTCGTTTTTTTTTTTG+TGG | + | chr4_2:6530235-6530254 | Msa0585570:intron | 20.0% |
| !!! | TTGCAATTTTTGATATTTGT+GGG | + | chr4_2:6530362-6530381 | Msa0585570:intron | 20.0% |
| !!! | AACAATTATGTCATGTTTTA+GGG | - | chr4_2:6530419-6530438 | None:intergenic | 20.0% |
| !!! | AACCATAATATCAAAGTTTT+TGG | - | chr4_2:6530755-6530774 | None:intergenic | 20.0% |
| !!! | TGATATTATGGTTATTTTTG+TGG | + | chr4_2:6530762-6530781 | Msa0585570:intron | 20.0% |
| !!! | ATTTCCATTCTGAAATTTAA+TGG | + | chr4_2:6531337-6531356 | Msa0585570:intron | 20.0% |
| !! | ATATCCATTAAATTTCAGAA+TGG | - | chr4_2:6531344-6531363 | None:intergenic | 20.0% |
| !! | AGTTCAATTCAAATATAGTT+TGG | - | chr4_2:6531466-6531485 | None:intergenic | 20.0% |
| !!! | TTGTAATGCGTTTTTATTAT+TGG | - | chr4_2:6531508-6531527 | None:intergenic | 20.0% |
| !!! | AGATATGCTAATTAATTTTG+TGG | - | chr4_2:6531617-6531636 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTCTTTTTTCGAT+TGG | + | chr4_2:6531799-6531818 | Msa0585570:intron | 20.0% |
| !!! | TTTCTTTCATTTTCATTATG+TGG | + | chr4_2:6531947-6531966 | Msa0585570:three_prime_UTR | 20.0% |
| !! | ACAAAAGTGATTAACTAAAT+TGG | - | chr4_2:6532067-6532086 | None:intergenic | 20.0% |
| !! | TTGAATGATTACAATAAAGA+AGG | + | chr4_2:6528400-6528419 | Msa0585570:intron | 20.0% |
| !! | AATGAGTCAAAGATTTATAA+GGG | - | chr4_2:6528558-6528577 | None:intergenic | 20.0% |
| !! | TAATGAGTCAAAGATTTATA+AGG | - | chr4_2:6528559-6528578 | None:intergenic | 20.0% |
| !! | GAAGAATATGTATAATTAGT+GGG | - | chr4_2:6528639-6528658 | None:intergenic | 20.0% |
| !! | AGAAGAATATGTATAATTAG+TGG | - | chr4_2:6528640-6528659 | None:intergenic | 20.0% |
| !! | AAAATCAATGGAAGAATAAA+TGG | + | chr4_2:6528687-6528706 | Msa0585570:intron | 20.0% |
| !! | AAATCAATGGAAGAATAAAT+GGG | + | chr4_2:6528688-6528707 | Msa0585570:intron | 20.0% |
| !!! | TCAAAAGGAATTTGTTAAAA+AGG | + | chr4_2:6528749-6528768 | Msa0585570:intron | 20.0% |
| !!! | GGCAATTGTTTTTTTTTTTT+TGG | + | chr4_2:6528815-6528834 | Msa0585570:intron | 20.0% |
| !!! | AGTTTTTTGTTAATAATACG+GGG | + | chr4_2:6529251-6529270 | Msa0585570:intron | 20.0% |
| !! | ATTATATTAGGAATATAGGT+GGG | + | chr4_2:6529274-6529293 | Msa0585570:intron | 20.0% |
| !!! | TAAAGTATTGAAAAACTGAA+AGG | - | chr4_2:6529506-6529525 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTTTTTTTGTGC+AGG | + | chr4_2:6529542-6529561 | Msa0585570:intron | 20.0% |
| !!! | TATGAATTTTAATACGGATA+TGG | + | chr4_2:6529634-6529653 | Msa0585570:intron | 20.0% |
| !!! | GTAAAGAGACATAATTTTAT+TGG | + | chr4_2:6529741-6529760 | Msa0585570:intron | 20.0% |
| !!! | CAGAATATTGTTAATTTGAT+TGG | + | chr4_2:6529776-6529795 | Msa0585570:intron | 20.0% |
| !! | CAAAAAAAAAAACGACATAA+GGG | - | chr4_2:6530235-6530254 | None:intergenic | 20.0% |
| !! | ACAAAAAAAAAAACGACATA+AGG | - | chr4_2:6530236-6530255 | None:intergenic | 20.0% |
| !!! | TTATGTCGTTTTTTTTTTTG+TGG | + | chr4_2:6530235-6530254 | Msa0585570:intron | 20.0% |
| !!! | TTGCAATTTTTGATATTTGT+GGG | + | chr4_2:6530362-6530381 | Msa0585570:intron | 20.0% |
| !!! | AACAATTATGTCATGTTTTA+GGG | - | chr4_2:6530419-6530438 | None:intergenic | 20.0% |
| !!! | AACCATAATATCAAAGTTTT+TGG | - | chr4_2:6530755-6530774 | None:intergenic | 20.0% |
| !!! | TGATATTATGGTTATTTTTG+TGG | + | chr4_2:6530762-6530781 | Msa0585570:intron | 20.0% |
| !!! | ATTTCCATTCTGAAATTTAA+TGG | + | chr4_2:6531337-6531356 | Msa0585570:intron | 20.0% |
| !! | ATATCCATTAAATTTCAGAA+TGG | - | chr4_2:6531344-6531363 | None:intergenic | 20.0% |
| !! | AGTTCAATTCAAATATAGTT+TGG | - | chr4_2:6531466-6531485 | None:intergenic | 20.0% |
| !!! | TTGTAATGCGTTTTTATTAT+TGG | - | chr4_2:6531508-6531527 | None:intergenic | 20.0% |
| !!! | AGATATGCTAATTAATTTTG+TGG | - | chr4_2:6531617-6531636 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTCTTTTTTCGAT+TGG | + | chr4_2:6531799-6531818 | Msa0585570:intron | 20.0% |
| !!! | TTTCTTTCATTTTCATTATG+TGG | + | chr4_2:6531947-6531966 | Msa0585570:three_prime_UTR | 20.0% |
| !! | ACAAAAGTGATTAACTAAAT+TGG | - | chr4_2:6532067-6532086 | None:intergenic | 20.0% |
| !! | ACAAAGTTAGTTTCATGATA+AGG | + | chr4_2:6528122-6528141 | Msa0585570:intron | 25.0% |
| !! | CAAAGTTAGTTTCATGATAA+GGG | + | chr4_2:6528123-6528142 | Msa0585570:intron | 25.0% |
| ! | ATTTGTATGCCTAAAAATCA+AGG | - | chr4_2:6528187-6528206 | None:intergenic | 25.0% |
| !! | AATCATTCAAGCTTATGTTT+TGG | - | chr4_2:6528390-6528409 | None:intergenic | 25.0% |
| ! | TATTATAGGAAATGTGAATG+TGG | - | chr4_2:6528534-6528553 | None:intergenic | 25.0% |
| !!! | AGATTTATAAGGGGTATTAT+AGG | - | chr4_2:6528548-6528567 | None:intergenic | 25.0% |
| ! | ATGAGTCAAAGATTTATAAG+GGG | - | chr4_2:6528557-6528576 | None:intergenic | 25.0% |
| !! | TTTCAAGTATAAATTCAGAG+TGG | + | chr4_2:6528794-6528813 | Msa0585570:intron | 25.0% |
| !! | CTTTTTAACAATTGTTACTC+TGG | - | chr4_2:6528846-6528865 | None:intergenic | 25.0% |
| ! | ACAAGACAAAACAAAACAAA+AGG | + | chr4_2:6528866-6528885 | Msa0585570:intron | 25.0% |
| ! | TTTACATTTATCTCCGTTTA+AGG | + | chr4_2:6529104-6529123 | Msa0585570:intron | 25.0% |
| ! | AATAATACGGGGATTATATT+AGG | + | chr4_2:6529262-6529281 | Msa0585570:intron | 25.0% |
| ! | GATTATATTAGGAATATAGG+TGG | + | chr4_2:6529273-6529292 | Msa0585570:intron | 25.0% |
| ! | TATTGTTCTTGTAATAATCC+AGG | + | chr4_2:6529309-6529328 | Msa0585570:intron | 25.0% |
| !!! | TAGGGTTTTGTTTGTTTTAA+GGG | - | chr4_2:6529354-6529373 | None:intergenic | 25.0% |
| !!! | TTAGGGTTTTGTTTGTTTTA+AGG | - | chr4_2:6529355-6529374 | None:intergenic | 25.0% |
| ! | GATGATGAATTGTGATATTA+GGG | - | chr4_2:6529372-6529391 | None:intergenic | 25.0% |
| ! | AGATGATGAATTGTGATATT+AGG | - | chr4_2:6529373-6529392 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTTCAAATCTACA+AGG | + | chr4_2:6529575-6529594 | Msa0585570:intron | 25.0% |
| !! | TAATTTGATTGGAGTATTAG+AGG | + | chr4_2:6529787-6529806 | Msa0585570:intron | 25.0% |
| ! | ATCATTTGTGAAACTGTTTA+TGG | + | chr4_2:6529852-6529871 | Msa0585570:intron | 25.0% |
| ! | TCATTTGTGAAACTGTTTAT+GGG | + | chr4_2:6529853-6529872 | Msa0585570:intron | 25.0% |
| !!! | TTTTTTCATAAACGCTTTAC+AGG | - | chr4_2:6530054-6530073 | None:intergenic | 25.0% |
| ! | CAAAAATAAGCTAATCCATA+CGG | + | chr4_2:6530191-6530210 | Msa0585570:intron | 25.0% |
| ! | AAAAATAAGCTAATCCATAC+GGG | + | chr4_2:6530192-6530211 | Msa0585570:intron | 25.0% |
| ! | GACAATGTATAATATATGCA+AGG | - | chr4_2:6530283-6530302 | None:intergenic | 25.0% |
| !! | GTTGCAATTTTTGATATTTG+TGG | + | chr4_2:6530361-6530380 | Msa0585570:intron | 25.0% |
| !!! | ACAATTATGTCATGTTTTAG+GGG | - | chr4_2:6530418-6530437 | None:intergenic | 25.0% |
| !! | CAACAATTATGTCATGTTTT+AGG | - | chr4_2:6530420-6530439 | None:intergenic | 25.0% |
| ! | CACCAAAAACTTTGATATTA+TGG | + | chr4_2:6530750-6530769 | Msa0585570:intron | 25.0% |
| ! | CAAATTACACAAACAAAAGA+AGG | - | chr4_2:6530886-6530905 | None:intergenic | 25.0% |
| ! | TCTAAGTAACAATTCATCTA+TGG | + | chr4_2:6530967-6530986 | Msa0585570:intron | 25.0% |
| ! | TTACTTGTTTGTTTATGCAT+TGG | + | chr4_2:6531397-6531416 | Msa0585570:intron | 25.0% |
| ! | TACTTGTTTGTTTATGCATT+GGG | + | chr4_2:6531398-6531417 | Msa0585570:intron | 25.0% |
| ! | AACGCATTACAAAAAATGAA+TGG | + | chr4_2:6531516-6531535 | Msa0585570:intron | 25.0% |
| ! | ACGCATTACAAAAAATGAAT+GGG | + | chr4_2:6531517-6531536 | Msa0585570:intron | 25.0% |
| ! | CAAGCAAAATTAAAGAATGA+TGG | + | chr4_2:6531555-6531574 | Msa0585570:intron | 25.0% |
| !! | TAATTAATTTTGTGGTGTAG+TGG | - | chr4_2:6531609-6531628 | None:intergenic | 25.0% |
| ! | TGAAAGAAAAACACAATGTA+TGG | - | chr4_2:6531936-6531955 | None:intergenic | 25.0% |
| !!! | TAATCACTTTTGTTTTGCTA+TGG | + | chr4_2:6532074-6532093 | Msa0585570:three_prime_UTR | 25.0% |
| !! | ACAAAGTTAGTTTCATGATA+AGG | + | chr4_2:6528122-6528141 | Msa0585570:intron | 25.0% |
| !! | CAAAGTTAGTTTCATGATAA+GGG | + | chr4_2:6528123-6528142 | Msa0585570:intron | 25.0% |
| ! | ATTTGTATGCCTAAAAATCA+AGG | - | chr4_2:6528187-6528206 | None:intergenic | 25.0% |
| !! | AATCATTCAAGCTTATGTTT+TGG | - | chr4_2:6528390-6528409 | None:intergenic | 25.0% |
| ! | TATTATAGGAAATGTGAATG+TGG | - | chr4_2:6528534-6528553 | None:intergenic | 25.0% |
| !!! | AGATTTATAAGGGGTATTAT+AGG | - | chr4_2:6528548-6528567 | None:intergenic | 25.0% |
| ! | ATGAGTCAAAGATTTATAAG+GGG | - | chr4_2:6528557-6528576 | None:intergenic | 25.0% |
| !! | TTTCAAGTATAAATTCAGAG+TGG | + | chr4_2:6528794-6528813 | Msa0585570:intron | 25.0% |
| !! | CTTTTTAACAATTGTTACTC+TGG | - | chr4_2:6528846-6528865 | None:intergenic | 25.0% |
| ! | ACAAGACAAAACAAAACAAA+AGG | + | chr4_2:6528866-6528885 | Msa0585570:intron | 25.0% |
| ! | TTTACATTTATCTCCGTTTA+AGG | + | chr4_2:6529104-6529123 | Msa0585570:intron | 25.0% |
| ! | AATAATACGGGGATTATATT+AGG | + | chr4_2:6529262-6529281 | Msa0585570:intron | 25.0% |
| ! | GATTATATTAGGAATATAGG+TGG | + | chr4_2:6529273-6529292 | Msa0585570:intron | 25.0% |
| ! | TATTGTTCTTGTAATAATCC+AGG | + | chr4_2:6529309-6529328 | Msa0585570:intron | 25.0% |
| !!! | TAGGGTTTTGTTTGTTTTAA+GGG | - | chr4_2:6529354-6529373 | None:intergenic | 25.0% |
| !!! | TTAGGGTTTTGTTTGTTTTA+AGG | - | chr4_2:6529355-6529374 | None:intergenic | 25.0% |
| ! | GATGATGAATTGTGATATTA+GGG | - | chr4_2:6529372-6529391 | None:intergenic | 25.0% |
| ! | AGATGATGAATTGTGATATT+AGG | - | chr4_2:6529373-6529392 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTTCAAATCTACA+AGG | + | chr4_2:6529575-6529594 | Msa0585570:intron | 25.0% |
| !! | TAATTTGATTGGAGTATTAG+AGG | + | chr4_2:6529787-6529806 | Msa0585570:intron | 25.0% |
| ! | ATCATTTGTGAAACTGTTTA+TGG | + | chr4_2:6529852-6529871 | Msa0585570:intron | 25.0% |
| ! | TCATTTGTGAAACTGTTTAT+GGG | + | chr4_2:6529853-6529872 | Msa0585570:intron | 25.0% |
| !!! | TTTTTTCATAAACGCTTTAC+AGG | - | chr4_2:6530054-6530073 | None:intergenic | 25.0% |
| ! | CAAAAATAAGCTAATCCATA+CGG | + | chr4_2:6530191-6530210 | Msa0585570:intron | 25.0% |
| ! | AAAAATAAGCTAATCCATAC+GGG | + | chr4_2:6530192-6530211 | Msa0585570:intron | 25.0% |
| ! | GACAATGTATAATATATGCA+AGG | - | chr4_2:6530283-6530302 | None:intergenic | 25.0% |
| !! | GTTGCAATTTTTGATATTTG+TGG | + | chr4_2:6530361-6530380 | Msa0585570:intron | 25.0% |
| !!! | ACAATTATGTCATGTTTTAG+GGG | - | chr4_2:6530418-6530437 | None:intergenic | 25.0% |
| !! | CAACAATTATGTCATGTTTT+AGG | - | chr4_2:6530420-6530439 | None:intergenic | 25.0% |
| ! | CACCAAAAACTTTGATATTA+TGG | + | chr4_2:6530750-6530769 | Msa0585570:intron | 25.0% |
| ! | CAAATTACACAAACAAAAGA+AGG | - | chr4_2:6530886-6530905 | None:intergenic | 25.0% |
| ! | TCTAAGTAACAATTCATCTA+TGG | + | chr4_2:6530967-6530986 | Msa0585570:intron | 25.0% |
| ! | TTACTTGTTTGTTTATGCAT+TGG | + | chr4_2:6531397-6531416 | Msa0585570:intron | 25.0% |
| ! | TACTTGTTTGTTTATGCATT+GGG | + | chr4_2:6531398-6531417 | Msa0585570:intron | 25.0% |
| ! | AACGCATTACAAAAAATGAA+TGG | + | chr4_2:6531516-6531535 | Msa0585570:intron | 25.0% |
| ! | ACGCATTACAAAAAATGAAT+GGG | + | chr4_2:6531517-6531536 | Msa0585570:intron | 25.0% |
| ! | CAAGCAAAATTAAAGAATGA+TGG | + | chr4_2:6531555-6531574 | Msa0585570:intron | 25.0% |
| !! | TAATTAATTTTGTGGTGTAG+TGG | - | chr4_2:6531609-6531628 | None:intergenic | 25.0% |
| ! | TGAAAGAAAAACACAATGTA+TGG | - | chr4_2:6531936-6531955 | None:intergenic | 25.0% |
| !!! | TAATCACTTTTGTTTTGCTA+TGG | + | chr4_2:6532074-6532093 | Msa0585570:three_prime_UTR | 25.0% |
| AAACATCATAAATTGCATGG+AGG | - | chr4_2:6528212-6528231 | None:intergenic | 30.0% | |
| ATTTATGATGTTTCCCCATT+TGG | + | chr4_2:6528219-6528238 | Msa0585570:intron | 30.0% | |
| AAAGGAGTTTGTAACCAAAT+GGG | - | chr4_2:6528236-6528255 | None:intergenic | 30.0% | |
| TAAAGGAGTTTGTAACCAAA+TGG | - | chr4_2:6528237-6528256 | None:intergenic | 30.0% | |
| TTTGGTTACAAACTCCTTTA+AGG | + | chr4_2:6528237-6528256 | Msa0585570:intron | 30.0% | |
| ACGTGACTTTCATTTATAAG+TGG | + | chr4_2:6528294-6528313 | Msa0585570:intron | 30.0% | |
| AATTAGAGAGAATCCATAGA+AGG | + | chr4_2:6528426-6528445 | Msa0585570:intron | 30.0% | |
| TATAAATAAGAGAGAGCCAA+GGG | - | chr4_2:6528506-6528525 | None:intergenic | 30.0% | |
| TTATAAATAAGAGAGAGCCA+AGG | - | chr4_2:6528507-6528526 | None:intergenic | 30.0% | |
| TTTCTACGTTAACTCTCTTA+TGG | - | chr4_2:6528613-6528632 | None:intergenic | 30.0% | |
| ! | ATGATACTCCCTTTAAAAAC+TGG | + | chr4_2:6528711-6528730 | Msa0585570:intron | 30.0% |
| ! | TGATACTCCCTTTAAAAACT+GGG | + | chr4_2:6528712-6528731 | Msa0585570:intron | 30.0% |
| ! | ATATGGTCCCAGTTTTTAAA+GGG | - | chr4_2:6528722-6528741 | None:intergenic | 30.0% |
| ! | TTCCTTTTGAATTGTCGATA+TGG | - | chr4_2:6528739-6528758 | None:intergenic | 30.0% |
| GAATGTAAGATTCTTTGCAT+TGG | - | chr4_2:6529065-6529084 | None:intergenic | 30.0% | |
| GGGGATTATATTAGGAATAT+AGG | + | chr4_2:6529270-6529289 | Msa0585570:intron | 30.0% | |
| AAATCTACAAGGAAAATGTC+AGG | + | chr4_2:6529586-6529605 | Msa0585570:intron | 30.0% | |
| AATCTACAAGGAAAATGTCA+GGG | + | chr4_2:6529587-6529606 | Msa0585570:intron | 30.0% | |
| CAAATAAGTCCAATTCAAAC+AGG | - | chr4_2:6529813-6529832 | None:intergenic | 30.0% | |
| ! | GTTTTCACTAACAAATAGTC+TGG | - | chr4_2:6530118-6530137 | None:intergenic | 30.0% |
| !!! | TGTCGTTTTTTTTTTTGTGG+TGG | + | chr4_2:6530238-6530257 | Msa0585570:intron | 30.0% |
| TATAATATATGCAAGGTCCA+GGG | - | chr4_2:6530276-6530295 | None:intergenic | 30.0% | |
| ! | TTTTGATATTTGTGGGTACA+CGG | + | chr4_2:6530369-6530388 | Msa0585570:intron | 30.0% |
| TGACATAATTGTTGCAATTG+CGG | + | chr4_2:6530426-6530445 | Msa0585570:intron | 30.0% | |
| !! | TCTTGTGTGGTTTGTTTATT+TGG | + | chr4_2:6530507-6530526 | Msa0585570:intron | 30.0% |
| TAAGAATTGCAACTTAGACA+CGG | - | chr4_2:6530579-6530598 | None:intergenic | 30.0% | |
| TCTAAGTTGCAATTCTTACA+TGG | + | chr4_2:6530581-6530600 | Msa0585570:intron | 30.0% | |
| CTAAGTTGCAATTCTTACAT+GGG | + | chr4_2:6530582-6530601 | Msa0585570:intron | 30.0% | |
| CGCAAATCGCAATATAAAAA+TGG | - | chr4_2:6530664-6530683 | None:intergenic | 30.0% | |
| !!! | TATGGTTATTTTTGTGGTTG+TGG | + | chr4_2:6530768-6530787 | Msa0585570:intron | 30.0% |
| !!! | ATGGTTATTTTTGTGGTTGT+GGG | + | chr4_2:6530769-6530788 | Msa0585570:intron | 30.0% |
| CATGACAATGATTCTCTATA+AGG | + | chr4_2:6530840-6530859 | Msa0585570:intron | 30.0% | |
| AAAGTAATTGAGAAGAACAC+AGG | + | chr4_2:6531169-6531188 | Msa0585570:intron | 30.0% | |
| ATTACAAAAAATGAATGGGC+AGG | + | chr4_2:6531521-6531540 | Msa0585570:intron | 30.0% | |
| AGAAGCAAAATTCATTCTCA+AGG | - | chr4_2:6531977-6531996 | None:intergenic | 30.0% | |
| ! | GAATGAATTTTGCTTCTAGT+TGG | + | chr4_2:6531980-6531999 | Msa0585570:three_prime_UTR | 30.0% |
| ! | CAATATGATTTTGCTACTCT+CGG | + | chr4_2:6532027-6532046 | Msa0585570:three_prime_UTR | 30.0% |
| AAACATCATAAATTGCATGG+AGG | - | chr4_2:6528212-6528231 | None:intergenic | 30.0% | |
| ATTTATGATGTTTCCCCATT+TGG | + | chr4_2:6528219-6528238 | Msa0585570:intron | 30.0% | |
| AAAGGAGTTTGTAACCAAAT+GGG | - | chr4_2:6528236-6528255 | None:intergenic | 30.0% | |
| TAAAGGAGTTTGTAACCAAA+TGG | - | chr4_2:6528237-6528256 | None:intergenic | 30.0% | |
| TTTGGTTACAAACTCCTTTA+AGG | + | chr4_2:6528237-6528256 | Msa0585570:intron | 30.0% | |
| ACGTGACTTTCATTTATAAG+TGG | + | chr4_2:6528294-6528313 | Msa0585570:intron | 30.0% | |
| AATTAGAGAGAATCCATAGA+AGG | + | chr4_2:6528426-6528445 | Msa0585570:intron | 30.0% | |
| TATAAATAAGAGAGAGCCAA+GGG | - | chr4_2:6528506-6528525 | None:intergenic | 30.0% | |
| TTATAAATAAGAGAGAGCCA+AGG | - | chr4_2:6528507-6528526 | None:intergenic | 30.0% | |
| TTTCTACGTTAACTCTCTTA+TGG | - | chr4_2:6528613-6528632 | None:intergenic | 30.0% | |
| ! | ATGATACTCCCTTTAAAAAC+TGG | + | chr4_2:6528711-6528730 | Msa0585570:intron | 30.0% |
| ! | TGATACTCCCTTTAAAAACT+GGG | + | chr4_2:6528712-6528731 | Msa0585570:intron | 30.0% |
| ! | ATATGGTCCCAGTTTTTAAA+GGG | - | chr4_2:6528722-6528741 | None:intergenic | 30.0% |
| ! | TTCCTTTTGAATTGTCGATA+TGG | - | chr4_2:6528739-6528758 | None:intergenic | 30.0% |
| GAATGTAAGATTCTTTGCAT+TGG | - | chr4_2:6529065-6529084 | None:intergenic | 30.0% | |
| GGGGATTATATTAGGAATAT+AGG | + | chr4_2:6529270-6529289 | Msa0585570:intron | 30.0% | |
| AAATCTACAAGGAAAATGTC+AGG | + | chr4_2:6529586-6529605 | Msa0585570:intron | 30.0% | |
| AATCTACAAGGAAAATGTCA+GGG | + | chr4_2:6529587-6529606 | Msa0585570:intron | 30.0% | |
| CAAATAAGTCCAATTCAAAC+AGG | - | chr4_2:6529813-6529832 | None:intergenic | 30.0% | |
| ! | GTTTTCACTAACAAATAGTC+TGG | - | chr4_2:6530118-6530137 | None:intergenic | 30.0% |
| !!! | TGTCGTTTTTTTTTTTGTGG+TGG | + | chr4_2:6530238-6530257 | Msa0585570:intron | 30.0% |
| TATAATATATGCAAGGTCCA+GGG | - | chr4_2:6530276-6530295 | None:intergenic | 30.0% | |
| ! | TTTTGATATTTGTGGGTACA+CGG | + | chr4_2:6530369-6530388 | Msa0585570:intron | 30.0% |
| TGACATAATTGTTGCAATTG+CGG | + | chr4_2:6530426-6530445 | Msa0585570:intron | 30.0% | |
| !! | TCTTGTGTGGTTTGTTTATT+TGG | + | chr4_2:6530507-6530526 | Msa0585570:intron | 30.0% |
| TAAGAATTGCAACTTAGACA+CGG | - | chr4_2:6530579-6530598 | None:intergenic | 30.0% | |
| TCTAAGTTGCAATTCTTACA+TGG | + | chr4_2:6530581-6530600 | Msa0585570:intron | 30.0% | |
| CTAAGTTGCAATTCTTACAT+GGG | + | chr4_2:6530582-6530601 | Msa0585570:intron | 30.0% | |
| CGCAAATCGCAATATAAAAA+TGG | - | chr4_2:6530664-6530683 | None:intergenic | 30.0% | |
| !!! | TATGGTTATTTTTGTGGTTG+TGG | + | chr4_2:6530768-6530787 | Msa0585570:intron | 30.0% |
| !!! | ATGGTTATTTTTGTGGTTGT+GGG | + | chr4_2:6530769-6530788 | Msa0585570:intron | 30.0% |
| CATGACAATGATTCTCTATA+AGG | + | chr4_2:6530840-6530859 | Msa0585570:intron | 30.0% | |
| AAAGTAATTGAGAAGAACAC+AGG | + | chr4_2:6531169-6531188 | Msa0585570:intron | 30.0% | |
| ATTACAAAAAATGAATGGGC+AGG | + | chr4_2:6531521-6531540 | Msa0585570:intron | 30.0% | |
| AGAAGCAAAATTCATTCTCA+AGG | - | chr4_2:6531977-6531996 | None:intergenic | 30.0% | |
| ! | GAATGAATTTTGCTTCTAGT+TGG | + | chr4_2:6531980-6531999 | Msa0585570:three_prime_UTR | 30.0% |
| ! | CAATATGATTTTGCTACTCT+CGG | + | chr4_2:6532027-6532046 | Msa0585570:three_prime_UTR | 30.0% |
| GTATGCCTAAAAATCAAGGT+GGG | - | chr4_2:6528183-6528202 | None:intergenic | 35.0% | |
| TGTATGCCTAAAAATCAAGG+TGG | - | chr4_2:6528184-6528203 | None:intergenic | 35.0% | |
| GGGAAACATCATAAATTGCA+TGG | - | chr4_2:6528215-6528234 | None:intergenic | 35.0% | |
| AAGGAGTTTGTAACCAAATG+GGG | - | chr4_2:6528235-6528254 | None:intergenic | 35.0% | |
| AAAACTGCTCTTCTCCTTAA+AGG | - | chr4_2:6528254-6528273 | None:intergenic | 35.0% | |
| AGAATCCATAGAAGGAGAAT+AGG | + | chr4_2:6528434-6528453 | Msa0585570:intron | 35.0% | |
| GAATCCATAGAAGGAGAATA+GGG | + | chr4_2:6528435-6528454 | Msa0585570:intron | 35.0% | |
| ! | ATTTTCATGCCTTTTTCCCT+TGG | + | chr4_2:6528487-6528506 | Msa0585570:intron | 35.0% |
| TGACTCATTACACTCAACTT+TGG | + | chr4_2:6528569-6528588 | Msa0585570:intron | 35.0% | |
| ! | GATATGGTCCCAGTTTTTAA+AGG | - | chr4_2:6528723-6528742 | None:intergenic | 35.0% |
| GACCATATCGACAATTCAAA+AGG | + | chr4_2:6528734-6528753 | Msa0585570:intron | 35.0% | |
| GGTTTAGCCCTAATTAAAAG+CGG | + | chr4_2:6528913-6528932 | Msa0585570:intron | 35.0% | |
| GTTTAGCCCTAATTAAAAGC+GGG | + | chr4_2:6528914-6528933 | Msa0585570:intron | 35.0% | |
| !! | TGTTAGCCCGCTTTTAATTA+GGG | - | chr4_2:6528923-6528942 | None:intergenic | 35.0% |
| TAAGATTCTTTGCATTGGAC+AGG | - | chr4_2:6529060-6529079 | None:intergenic | 35.0% | |
| TCATTGTGAGTGTCCTTAAA+CGG | - | chr4_2:6529120-6529139 | None:intergenic | 35.0% | |
| TATTAGGAATATAGGTGGGT+TGG | + | chr4_2:6529278-6529297 | Msa0585570:intron | 35.0% | |
| AGGGCCTCTTCAAAAATATT+GGG | - | chr4_2:6529335-6529354 | None:intergenic | 35.0% | |
| AAGGGCCTCTTCAAAAATAT+TGG | - | chr4_2:6529336-6529355 | None:intergenic | 35.0% | |
| ATGGAGATTCTTACTGTTTG+TGG | - | chr4_2:6529474-6529493 | None:intergenic | 35.0% | |
| AACTGAAAGGAAAACGATGA+TGG | - | chr4_2:6529493-6529512 | None:intergenic | 35.0% | |
| TATTAGAGGCCTGTTTGAAT+TGG | + | chr4_2:6529801-6529820 | Msa0585570:intron | 35.0% | |
| ACCTGCTAAATAAGCTGTTT+AGG | + | chr4_2:6529962-6529981 | Msa0585570:intron | 35.0% | |
| CCTGCTAAATAAGCTGTTTA+GGG | + | chr4_2:6529963-6529982 | Msa0585570:intron | 35.0% | |
| TAAGGGCTCTGTTTGAATAA+GGG | - | chr4_2:6530218-6530237 | None:intergenic | 35.0% | |
| ATAAGGGCTCTGTTTGAATA+AGG | - | chr4_2:6530219-6530238 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTTTTGTGGTGGCC+AGG | + | chr4_2:6530243-6530262 | Msa0585570:intron | 35.0% |
| !!! | TTTTTTTTTTGTGGTGGCCA+GGG | + | chr4_2:6530244-6530263 | Msa0585570:intron | 35.0% |
| GTATAATATATGCAAGGTCC+AGG | - | chr4_2:6530277-6530296 | None:intergenic | 35.0% | |
| TTTGATATTTGTGGGTACAC+GGG | + | chr4_2:6530370-6530389 | Msa0585570:intron | 35.0% | |
| ! | TTCTCTGTTCAGGACATTTT+TGG | + | chr4_2:6530606-6530625 | Msa0585570:intron | 35.0% |
| GCCAGAAAATGTGGATAAAT+GGG | + | chr4_2:6530696-6530715 | Msa0585570:intron | 35.0% | |
| CCAGAAAATGTGGATAAATG+GGG | + | chr4_2:6530697-6530716 | Msa0585570:intron | 35.0% | |
| CAGAAAATGTGGATAAATGG+GGG | + | chr4_2:6530698-6530717 | Msa0585570:intron | 35.0% | |
| AGAAAATGTGGATAAATGGG+GGG | + | chr4_2:6530699-6530718 | Msa0585570:intron | 35.0% | |
| TTGTCATGCAATGACGAAAT+AGG | - | chr4_2:6530828-6530847 | None:intergenic | 35.0% | |
| ATACAGAACAACACAAGACA+CGG | - | chr4_2:6530917-6530936 | None:intergenic | 35.0% | |
| ! | CTTGTGTTGTTCTGTATGTT+TGG | + | chr4_2:6530920-6530939 | Msa0585570:intron | 35.0% |
| !! | GATATTTTTGCTATGCAGTG+AGG | + | chr4_2:6531003-6531022 | Msa0585570:intron | 35.0% |
| !! | CAATTACTTTTGCACCTTCA+TGG | - | chr4_2:6531159-6531178 | None:intergenic | 35.0% |
| TTGACGAGTTTAACATAGTC+AGG | - | chr4_2:6531229-6531248 | None:intergenic | 35.0% | |
| TGACTATGTTAAACTCGTCA+AGG | + | chr4_2:6531228-6531247 | Msa0585570:CDS | 35.0% | |
| TATGCATTGGGATACTTATC+AGG | + | chr4_2:6531410-6531429 | Msa0585570:intron | 35.0% | |
| ! | TTAATTTTGTGGTGTAGTGG+TGG | - | chr4_2:6531606-6531625 | None:intergenic | 35.0% |
| CACATTCAACAGTTAAAACC+AGG | - | chr4_2:6531832-6531851 | None:intergenic | 35.0% | |
| !!! | CTGGTTTTAACTGTTGAATG+TGG | + | chr4_2:6531830-6531849 | Msa0585570:intron | 35.0% |
| !! | CTTCTAGTTGGTGTTATCTA+AGG | + | chr4_2:6531992-6532011 | Msa0585570:three_prime_UTR | 35.0% |
| ACTTCAGTGACATAATGTCA+CGG | - | chr4_2:6532164-6532183 | None:intergenic | 35.0% | |
| GTATGCCTAAAAATCAAGGT+GGG | - | chr4_2:6528183-6528202 | None:intergenic | 35.0% | |
| TGTATGCCTAAAAATCAAGG+TGG | - | chr4_2:6528184-6528203 | None:intergenic | 35.0% | |
| GGGAAACATCATAAATTGCA+TGG | - | chr4_2:6528215-6528234 | None:intergenic | 35.0% | |
| AAGGAGTTTGTAACCAAATG+GGG | - | chr4_2:6528235-6528254 | None:intergenic | 35.0% | |
| AAAACTGCTCTTCTCCTTAA+AGG | - | chr4_2:6528254-6528273 | None:intergenic | 35.0% | |
| AGAATCCATAGAAGGAGAAT+AGG | + | chr4_2:6528434-6528453 | Msa0585570:intron | 35.0% | |
| GAATCCATAGAAGGAGAATA+GGG | + | chr4_2:6528435-6528454 | Msa0585570:intron | 35.0% | |
| ! | ATTTTCATGCCTTTTTCCCT+TGG | + | chr4_2:6528487-6528506 | Msa0585570:intron | 35.0% |
| TGACTCATTACACTCAACTT+TGG | + | chr4_2:6528569-6528588 | Msa0585570:intron | 35.0% | |
| ! | GATATGGTCCCAGTTTTTAA+AGG | - | chr4_2:6528723-6528742 | None:intergenic | 35.0% |
| GACCATATCGACAATTCAAA+AGG | + | chr4_2:6528734-6528753 | Msa0585570:intron | 35.0% | |
| GGTTTAGCCCTAATTAAAAG+CGG | + | chr4_2:6528913-6528932 | Msa0585570:intron | 35.0% | |
| GTTTAGCCCTAATTAAAAGC+GGG | + | chr4_2:6528914-6528933 | Msa0585570:intron | 35.0% | |
| !! | TGTTAGCCCGCTTTTAATTA+GGG | - | chr4_2:6528923-6528942 | None:intergenic | 35.0% |
| TAAGATTCTTTGCATTGGAC+AGG | - | chr4_2:6529060-6529079 | None:intergenic | 35.0% | |
| TCATTGTGAGTGTCCTTAAA+CGG | - | chr4_2:6529120-6529139 | None:intergenic | 35.0% | |
| TATTAGGAATATAGGTGGGT+TGG | + | chr4_2:6529278-6529297 | Msa0585570:intron | 35.0% | |
| AGGGCCTCTTCAAAAATATT+GGG | - | chr4_2:6529335-6529354 | None:intergenic | 35.0% | |
| AAGGGCCTCTTCAAAAATAT+TGG | - | chr4_2:6529336-6529355 | None:intergenic | 35.0% | |
| ATGGAGATTCTTACTGTTTG+TGG | - | chr4_2:6529474-6529493 | None:intergenic | 35.0% | |
| AACTGAAAGGAAAACGATGA+TGG | - | chr4_2:6529493-6529512 | None:intergenic | 35.0% | |
| TATTAGAGGCCTGTTTGAAT+TGG | + | chr4_2:6529801-6529820 | Msa0585570:intron | 35.0% | |
| ACCTGCTAAATAAGCTGTTT+AGG | + | chr4_2:6529962-6529981 | Msa0585570:intron | 35.0% | |
| CCTGCTAAATAAGCTGTTTA+GGG | + | chr4_2:6529963-6529982 | Msa0585570:intron | 35.0% | |
| TAAGGGCTCTGTTTGAATAA+GGG | - | chr4_2:6530218-6530237 | None:intergenic | 35.0% | |
| ATAAGGGCTCTGTTTGAATA+AGG | - | chr4_2:6530219-6530238 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTTTTGTGGTGGCC+AGG | + | chr4_2:6530243-6530262 | Msa0585570:intron | 35.0% |
| !!! | TTTTTTTTTTGTGGTGGCCA+GGG | + | chr4_2:6530244-6530263 | Msa0585570:intron | 35.0% |
| GTATAATATATGCAAGGTCC+AGG | - | chr4_2:6530277-6530296 | None:intergenic | 35.0% | |
| TTTGATATTTGTGGGTACAC+GGG | + | chr4_2:6530370-6530389 | Msa0585570:intron | 35.0% | |
| ! | TTCTCTGTTCAGGACATTTT+TGG | + | chr4_2:6530606-6530625 | Msa0585570:intron | 35.0% |
| GCCAGAAAATGTGGATAAAT+GGG | + | chr4_2:6530696-6530715 | Msa0585570:intron | 35.0% | |
| CCAGAAAATGTGGATAAATG+GGG | + | chr4_2:6530697-6530716 | Msa0585570:intron | 35.0% | |
| CAGAAAATGTGGATAAATGG+GGG | + | chr4_2:6530698-6530717 | Msa0585570:intron | 35.0% | |
| AGAAAATGTGGATAAATGGG+GGG | + | chr4_2:6530699-6530718 | Msa0585570:intron | 35.0% | |
| TTGTCATGCAATGACGAAAT+AGG | - | chr4_2:6530828-6530847 | None:intergenic | 35.0% | |
| ATACAGAACAACACAAGACA+CGG | - | chr4_2:6530917-6530936 | None:intergenic | 35.0% | |
| ! | CTTGTGTTGTTCTGTATGTT+TGG | + | chr4_2:6530920-6530939 | Msa0585570:intron | 35.0% |
| !! | GATATTTTTGCTATGCAGTG+AGG | + | chr4_2:6531003-6531022 | Msa0585570:intron | 35.0% |
| !! | CAATTACTTTTGCACCTTCA+TGG | - | chr4_2:6531159-6531178 | None:intergenic | 35.0% |
| TTGACGAGTTTAACATAGTC+AGG | - | chr4_2:6531229-6531248 | None:intergenic | 35.0% | |
| TGACTATGTTAAACTCGTCA+AGG | + | chr4_2:6531228-6531247 | Msa0585570:CDS | 35.0% | |
| TATGCATTGGGATACTTATC+AGG | + | chr4_2:6531410-6531429 | Msa0585570:intron | 35.0% | |
| ! | TTAATTTTGTGGTGTAGTGG+TGG | - | chr4_2:6531606-6531625 | None:intergenic | 35.0% |
| CACATTCAACAGTTAAAACC+AGG | - | chr4_2:6531832-6531851 | None:intergenic | 35.0% | |
| !!! | CTGGTTTTAACTGTTGAATG+TGG | + | chr4_2:6531830-6531849 | Msa0585570:intron | 35.0% |
| !! | CTTCTAGTTGGTGTTATCTA+AGG | + | chr4_2:6531992-6532011 | Msa0585570:three_prime_UTR | 35.0% |
| ACTTCAGTGACATAATGTCA+CGG | - | chr4_2:6532164-6532183 | None:intergenic | 35.0% | |
| ! | CACAACCCACCTTGATTTTT+AGG | + | chr4_2:6528175-6528194 | Msa0585570:intron | 40.0% |
| CTATCCCTATTCTCCTTCTA+TGG | - | chr4_2:6528442-6528461 | None:intergenic | 40.0% | |
| !! | GTGTTAGCCCGCTTTTAATT+AGG | - | chr4_2:6528924-6528943 | None:intergenic | 40.0% |
| CTCTTCAAAAATATTGGGCC+TGG | - | chr4_2:6529330-6529349 | None:intergenic | 40.0% | |
| !! | CAGGCCCAATATTTTTGAAG+AGG | + | chr4_2:6529328-6529347 | Msa0585570:intron | 40.0% |
| TGCATTCATCACAAACTCGT+TGG | + | chr4_2:6529394-6529413 | Msa0585570:intron | 40.0% | |
| TCATCACAAACTCGTTGGAT+TGG | + | chr4_2:6529399-6529418 | Msa0585570:intron | 40.0% | |
| CCCTAAACAGCTTATTTAGC+AGG | - | chr4_2:6529966-6529985 | None:intergenic | 40.0% | |
| ! | TAAGCTGTTTAGGGCTTGTT+TGG | + | chr4_2:6529972-6529991 | Msa0585570:intron | 40.0% |
| !! | GCTTGTGTAGTTTGTTTGTC+TGG | + | chr4_2:6530535-6530554 | Msa0585570:intron | 40.0% |
| TTACATGGGTTTCTCTGTTC+AGG | + | chr4_2:6530596-6530615 | Msa0585570:intron | 40.0% | |
| CTTGATATCGCCAGAAAATG+TGG | + | chr4_2:6530687-6530706 | Msa0585570:intron | 40.0% | |
| CGCCAGAAAATGTGGATAAA+TGG | + | chr4_2:6530695-6530714 | Msa0585570:intron | 40.0% | |
| ! | CCCCATTTATCCACATTTTC+TGG | - | chr4_2:6530700-6530719 | None:intergenic | 40.0% |
| GTTGTTCTGTATGTTTGGTC+TGG | + | chr4_2:6530925-6530944 | Msa0585570:intron | 40.0% | |
| AAGGCAGTCATGATATCCAT+TGG | - | chr4_2:6531085-6531104 | None:intergenic | 40.0% | |
| !! | TTACTTTTGCACCTTCATGG+AGG | - | chr4_2:6531156-6531175 | None:intergenic | 40.0% |
| GTCAATCTTACACAACTGCA+AGG | - | chr4_2:6531704-6531723 | None:intergenic | 40.0% | |
| ! | TTGTGTAAGATTGACTCCGA+GGG | + | chr4_2:6531709-6531728 | Msa0585570:CDS | 40.0% |
| !! | TTTTCGATTGGTGTTTTGCC+TGG | + | chr4_2:6531811-6531830 | Msa0585570:intron | 40.0% |
| CTGTGCAAAGTTCCTTTGTA+TGG | + | chr4_2:6532136-6532155 | Msa0585570:three_prime_UTR | 40.0% | |
| AATGTCACGGTACCATACAA+AGG | - | chr4_2:6532151-6532170 | None:intergenic | 40.0% | |
| ! | CACAACCCACCTTGATTTTT+AGG | + | chr4_2:6528175-6528194 | Msa0585570:intron | 40.0% |
| CTATCCCTATTCTCCTTCTA+TGG | - | chr4_2:6528442-6528461 | None:intergenic | 40.0% | |
| !! | GTGTTAGCCCGCTTTTAATT+AGG | - | chr4_2:6528924-6528943 | None:intergenic | 40.0% |
| CTCTTCAAAAATATTGGGCC+TGG | - | chr4_2:6529330-6529349 | None:intergenic | 40.0% | |
| !! | CAGGCCCAATATTTTTGAAG+AGG | + | chr4_2:6529328-6529347 | Msa0585570:intron | 40.0% |
| TGCATTCATCACAAACTCGT+TGG | + | chr4_2:6529394-6529413 | Msa0585570:intron | 40.0% | |
| TCATCACAAACTCGTTGGAT+TGG | + | chr4_2:6529399-6529418 | Msa0585570:intron | 40.0% | |
| CCCTAAACAGCTTATTTAGC+AGG | - | chr4_2:6529966-6529985 | None:intergenic | 40.0% | |
| ! | TAAGCTGTTTAGGGCTTGTT+TGG | + | chr4_2:6529972-6529991 | Msa0585570:intron | 40.0% |
| !! | GCTTGTGTAGTTTGTTTGTC+TGG | + | chr4_2:6530535-6530554 | Msa0585570:intron | 40.0% |
| TTACATGGGTTTCTCTGTTC+AGG | + | chr4_2:6530596-6530615 | Msa0585570:intron | 40.0% | |
| CTTGATATCGCCAGAAAATG+TGG | + | chr4_2:6530687-6530706 | Msa0585570:intron | 40.0% | |
| CGCCAGAAAATGTGGATAAA+TGG | + | chr4_2:6530695-6530714 | Msa0585570:intron | 40.0% | |
| ! | CCCCATTTATCCACATTTTC+TGG | - | chr4_2:6530700-6530719 | None:intergenic | 40.0% |
| GTTGTTCTGTATGTTTGGTC+TGG | + | chr4_2:6530925-6530944 | Msa0585570:intron | 40.0% | |
| AAGGCAGTCATGATATCCAT+TGG | - | chr4_2:6531085-6531104 | None:intergenic | 40.0% | |
| !! | TTACTTTTGCACCTTCATGG+AGG | - | chr4_2:6531156-6531175 | None:intergenic | 40.0% |
| GTCAATCTTACACAACTGCA+AGG | - | chr4_2:6531704-6531723 | None:intergenic | 40.0% | |
| ! | TTGTGTAAGATTGACTCCGA+GGG | + | chr4_2:6531709-6531728 | Msa0585570:CDS | 40.0% |
| !! | TTTTCGATTGGTGTTTTGCC+TGG | + | chr4_2:6531811-6531830 | Msa0585570:intron | 40.0% |
| CTGTGCAAAGTTCCTTTGTA+TGG | + | chr4_2:6532136-6532155 | Msa0585570:three_prime_UTR | 40.0% | |
| AATGTCACGGTACCATACAA+AGG | - | chr4_2:6532151-6532170 | None:intergenic | 40.0% | |
| AAGAGAGAGCCAAGGGAAAA+AGG | - | chr4_2:6528499-6528518 | None:intergenic | 45.0% | |
| TGTTTGAATAAGGGCCCGTA+TGG | - | chr4_2:6530209-6530228 | None:intergenic | 45.0% | |
| CGGGATTCATTCTGTAGTTG+TGG | + | chr4_2:6530389-6530408 | Msa0585570:intron | 45.0% | |
| TCTTATCTGTGCGTCTTGTG+TGG | + | chr4_2:6530494-6530513 | Msa0585570:intron | 45.0% | |
| CTTCCTAAGCACAAGTTGCA+AGG | - | chr4_2:6531104-6531123 | None:intergenic | 45.0% | |
| ACTTGTGCTTAGGAAGTCAC+TGG | + | chr4_2:6531108-6531127 | Msa0585570:CDS | 45.0% | |
| CTTAGGAAGTCACTGGCATA+TGG | + | chr4_2:6531115-6531134 | Msa0585570:CDS | 45.0% | |
| CGAGTTTAACATAGTCAGGC+TGG | - | chr4_2:6531225-6531244 | None:intergenic | 45.0% | |
| TGCGAAGACACTTGGAGAAT+GGG | + | chr4_2:6531294-6531313 | Msa0585570:CDS | 45.0% | |
| CTTACACAACTGCAAGGAGA+AGG | - | chr4_2:6531698-6531717 | None:intergenic | 45.0% | |
| ! | GTTGTGTAAGATTGACTCCG+AGG | + | chr4_2:6531708-6531727 | Msa0585570:intron | 45.0% |
| !! | TACCTTCCTAGCTTTTCCCT+CGG | - | chr4_2:6531728-6531747 | None:intergenic | 45.0% |
| GGAAAAGCTAGGAAGGTAAC+TGG | + | chr4_2:6531730-6531749 | Msa0585570:CDS | 45.0% | |
| TTATACCTTGACCACCACAC+AGG | - | chr4_2:6531761-6531780 | None:intergenic | 45.0% | |
| TTAACTGTTGAATGTGGCCG+TGG | + | chr4_2:6531836-6531855 | Msa0585570:intron | 45.0% | |
| GTGCTGCAGAACAACATTGT+AGG | - | chr4_2:6531888-6531907 | None:intergenic | 45.0% | |
| AAGAGAGAGCCAAGGGAAAA+AGG | - | chr4_2:6528499-6528518 | None:intergenic | 45.0% | |
| TGTTTGAATAAGGGCCCGTA+TGG | - | chr4_2:6530209-6530228 | None:intergenic | 45.0% | |
| CGGGATTCATTCTGTAGTTG+TGG | + | chr4_2:6530389-6530408 | Msa0585570:intron | 45.0% | |
| TCTTATCTGTGCGTCTTGTG+TGG | + | chr4_2:6530494-6530513 | Msa0585570:intron | 45.0% | |
| CTTCCTAAGCACAAGTTGCA+AGG | - | chr4_2:6531104-6531123 | None:intergenic | 45.0% | |
| ACTTGTGCTTAGGAAGTCAC+TGG | + | chr4_2:6531108-6531127 | Msa0585570:CDS | 45.0% | |
| CTTAGGAAGTCACTGGCATA+TGG | + | chr4_2:6531115-6531134 | Msa0585570:CDS | 45.0% | |
| CGAGTTTAACATAGTCAGGC+TGG | - | chr4_2:6531225-6531244 | None:intergenic | 45.0% | |
| TGCGAAGACACTTGGAGAAT+GGG | + | chr4_2:6531294-6531313 | Msa0585570:CDS | 45.0% | |
| CTTACACAACTGCAAGGAGA+AGG | - | chr4_2:6531698-6531717 | None:intergenic | 45.0% | |
| ! | GTTGTGTAAGATTGACTCCG+AGG | + | chr4_2:6531708-6531727 | Msa0585570:intron | 45.0% |
| !! | TACCTTCCTAGCTTTTCCCT+CGG | - | chr4_2:6531728-6531747 | None:intergenic | 45.0% |
| GGAAAAGCTAGGAAGGTAAC+TGG | + | chr4_2:6531730-6531749 | Msa0585570:CDS | 45.0% | |
| TTATACCTTGACCACCACAC+AGG | - | chr4_2:6531761-6531780 | None:intergenic | 45.0% | |
| TTAACTGTTGAATGTGGCCG+TGG | + | chr4_2:6531836-6531855 | Msa0585570:intron | 45.0% | |
| GTGCTGCAGAACAACATTGT+AGG | - | chr4_2:6531888-6531907 | None:intergenic | 45.0% | |
| !! | ATTTAAAAAATAAAAATCAA+TGG | + | chr4_2:6528675-6528694 | Msa0585570:intron | 5.0% |
| !!! | TTAACAATTATTTTTAAAAA+AGG | + | chr4_2:6528892-6528911 | Msa0585570:intron | 5.0% |
| !! | ATTTAAAAAATAAAAATCAA+TGG | + | chr4_2:6528675-6528694 | Msa0585570:intron | 5.0% |
| !!! | TTAACAATTATTTTTAAAAA+AGG | + | chr4_2:6528892-6528911 | Msa0585570:intron | 5.0% |
| GATGCAGCTGTTGCATGTTG+TGG | + | chr4_2:6530724-6530743 | Msa0585570:intron | 50.0% | |
| !! | ATGATATCCATTGGCTCGCC+TGG | - | chr4_2:6531076-6531095 | None:intergenic | 50.0% |
| CTGCCTTGCAACTTGTGCTT+AGG | + | chr4_2:6531098-6531117 | Msa0585570:CDS | 50.0% | |
| AGGAAGTCACTGGCATATGG+TGG | + | chr4_2:6531118-6531137 | Msa0585570:CDS | 50.0% | |
| GGAAGTCACTGGCATATGGT+GGG | + | chr4_2:6531119-6531138 | Msa0585570:CDS | 50.0% | |
| GTTCCTAGTGCGAAGACACT+TGG | + | chr4_2:6531286-6531305 | Msa0585570:CDS | 50.0% | |
| TCTCCAAGTGTCTTCGCACT+AGG | - | chr4_2:6531292-6531311 | None:intergenic | 50.0% | |
| GTGCGAAGACACTTGGAGAA+TGG | + | chr4_2:6531293-6531312 | Msa0585570:CDS | 50.0% | |
| AAGACACTTGGAGAATGGGC+TGG | + | chr4_2:6531298-6531317 | Msa0585570:CDS | 50.0% | |
| GGTGTAGTGGTGGTTCTTGT+TGG | - | chr4_2:6531596-6531615 | None:intergenic | 50.0% | |
| TTGACTCCGAGGGAAAAGCT+AGG | + | chr4_2:6531719-6531738 | Msa0585570:CDS | 50.0% | |
| GATGCAGCTGTTGCATGTTG+TGG | + | chr4_2:6530724-6530743 | Msa0585570:intron | 50.0% | |
| !! | ATGATATCCATTGGCTCGCC+TGG | - | chr4_2:6531076-6531095 | None:intergenic | 50.0% |
| CTGCCTTGCAACTTGTGCTT+AGG | + | chr4_2:6531098-6531117 | Msa0585570:CDS | 50.0% | |
| AGGAAGTCACTGGCATATGG+TGG | + | chr4_2:6531118-6531137 | Msa0585570:CDS | 50.0% | |
| GGAAGTCACTGGCATATGGT+GGG | + | chr4_2:6531119-6531138 | Msa0585570:CDS | 50.0% | |
| GTTCCTAGTGCGAAGACACT+TGG | + | chr4_2:6531286-6531305 | Msa0585570:CDS | 50.0% | |
| TCTCCAAGTGTCTTCGCACT+AGG | - | chr4_2:6531292-6531311 | None:intergenic | 50.0% | |
| GTGCGAAGACACTTGGAGAA+TGG | + | chr4_2:6531293-6531312 | Msa0585570:CDS | 50.0% | |
| AAGACACTTGGAGAATGGGC+TGG | + | chr4_2:6531298-6531317 | Msa0585570:CDS | 50.0% | |
| GGTGTAGTGGTGGTTCTTGT+TGG | - | chr4_2:6531596-6531615 | None:intergenic | 50.0% | |
| TTGACTCCGAGGGAAAAGCT+AGG | + | chr4_2:6531719-6531738 | Msa0585570:CDS | 50.0% | |
| AAGGTCCAGGGTTTGAACCC+TGG | - | chr4_2:6530264-6530283 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr4_2:6530310-6530329 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr4_2:6530307-6530326 | Msa0585570:intron | 55.0% | |
| TGGAATTCCAGGCGAGCCAA+TGG | + | chr4_2:6531066-6531085 | Msa0585570:CDS | 55.0% | |
| CTCCGAGGGAAAAGCTAGGA+AGG | + | chr4_2:6531723-6531742 | Msa0585570:CDS | 55.0% | |
| TGTTGAATGTGGCCGTGGTC+AGG | + | chr4_2:6531841-6531860 | Msa0585570:intron | 55.0% | |
| ! | TGTGGCCGTGGTCAGGATTT+TGG | + | chr4_2:6531848-6531867 | Msa0585570:intron | 55.0% |
| ! | GTGGCCGTGGTCAGGATTTT+GGG | + | chr4_2:6531849-6531868 | Msa0585570:intron | 55.0% |
| ! | TGGCCGTGGTCAGGATTTTG+GGG | + | chr4_2:6531850-6531869 | Msa0585570:intron | 55.0% |
| CCTCCCCAAAATCCTGACCA+CGG | - | chr4_2:6531856-6531875 | None:intergenic | 55.0% | |
| AAGGTCCAGGGTTTGAACCC+TGG | - | chr4_2:6530264-6530283 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr4_2:6530310-6530329 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr4_2:6530307-6530326 | Msa0585570:intron | 55.0% | |
| TGGAATTCCAGGCGAGCCAA+TGG | + | chr4_2:6531066-6531085 | Msa0585570:CDS | 55.0% | |
| CTCCGAGGGAAAAGCTAGGA+AGG | + | chr4_2:6531723-6531742 | Msa0585570:CDS | 55.0% | |
| TGTTGAATGTGGCCGTGGTC+AGG | + | chr4_2:6531841-6531860 | Msa0585570:intron | 55.0% | |
| ! | TGTGGCCGTGGTCAGGATTT+TGG | + | chr4_2:6531848-6531867 | Msa0585570:intron | 55.0% |
| ! | GTGGCCGTGGTCAGGATTTT+GGG | + | chr4_2:6531849-6531868 | Msa0585570:intron | 55.0% |
| ! | TGGCCGTGGTCAGGATTTTG+GGG | + | chr4_2:6531850-6531869 | Msa0585570:intron | 55.0% |
| CCTCCCCAAAATCCTGACCA+CGG | - | chr4_2:6531856-6531875 | None:intergenic | 55.0% | |
| CTCACTGAACTCAACGCCGC+CGG | + | chr4_2:6529432-6529451 | Msa0585570:CDS | 60.0% | |
| TGGCTGCCGACGAAGAACTC+CGG | - | chr4_2:6529454-6529473 | None:intergenic | 60.0% | |
| TGGAATTCCAGCAGCAGGGG+CGG | - | chr4_2:6531056-6531075 | None:intergenic | 60.0% | |
| GCCTGGAATTCCAGCAGCAG+GGG | - | chr4_2:6531059-6531078 | None:intergenic | 60.0% | |
| CGCCTGGAATTCCAGCAGCA+GGG | - | chr4_2:6531060-6531079 | None:intergenic | 60.0% | |
| TCGCCTGGAATTCCAGCAGC+AGG | - | chr4_2:6531061-6531080 | None:intergenic | 60.0% | |
| !! | GCATATGGTGGGCTTGCACG+TGG | + | chr4_2:6531130-6531149 | Msa0585570:CDS | 60.0% |
| CTTGCACGTGGCCTCCATGA+AGG | + | chr4_2:6531142-6531161 | Msa0585570:CDS | 60.0% | |
| GGTAACTGGCTGCTCCTGTG+TGG | + | chr4_2:6531744-6531763 | Msa0585570:CDS | 60.0% | |
| AACTGGCTGCTCCTGTGTGG+TGG | + | chr4_2:6531747-6531766 | Msa0585570:CDS | 60.0% | |
| CTGCTCCTGTGTGGTGGTCA+AGG | + | chr4_2:6531753-6531772 | Msa0585570:CDS | 60.0% | |
| !! | CCGTGGTCAGGATTTTGGGG+AGG | + | chr4_2:6531853-6531872 | Msa0585570:intron | 60.0% |
| CTCACTGAACTCAACGCCGC+CGG | + | chr4_2:6529432-6529451 | Msa0585570:CDS | 60.0% | |
| TGGCTGCCGACGAAGAACTC+CGG | - | chr4_2:6529454-6529473 | None:intergenic | 60.0% | |
| TGGAATTCCAGCAGCAGGGG+CGG | - | chr4_2:6531056-6531075 | None:intergenic | 60.0% | |
| GCCTGGAATTCCAGCAGCAG+GGG | - | chr4_2:6531059-6531078 | None:intergenic | 60.0% | |
| CGCCTGGAATTCCAGCAGCA+GGG | - | chr4_2:6531060-6531079 | None:intergenic | 60.0% | |
| TCGCCTGGAATTCCAGCAGC+AGG | - | chr4_2:6531061-6531080 | None:intergenic | 60.0% | |
| !! | GCATATGGTGGGCTTGCACG+TGG | + | chr4_2:6531130-6531149 | Msa0585570:CDS | 60.0% |
| CTTGCACGTGGCCTCCATGA+AGG | + | chr4_2:6531142-6531161 | Msa0585570:CDS | 60.0% | |
| GGTAACTGGCTGCTCCTGTG+TGG | + | chr4_2:6531744-6531763 | Msa0585570:CDS | 60.0% | |
| AACTGGCTGCTCCTGTGTGG+TGG | + | chr4_2:6531747-6531766 | Msa0585570:CDS | 60.0% | |
| CTGCTCCTGTGTGGTGGTCA+AGG | + | chr4_2:6531753-6531772 | Msa0585570:CDS | 60.0% | |
| !! | CCGTGGTCAGGATTTTGGGG+AGG | + | chr4_2:6531853-6531872 | Msa0585570:intron | 60.0% |
| ACGCCGCCGGAGTTCTTCGT+CGG | + | chr4_2:6529445-6529464 | Msa0585570:CDS | 65.0% | |
| CTGCCGACGAAGAACTCCGG+CGG | - | chr4_2:6529451-6529470 | None:intergenic | 65.0% | |
| GGTGGCCAGGGTTCAAACCC+TGG | + | chr4_2:6530256-6530275 | Msa0585570:intron | 65.0% | |
| GCCCCTGCTGCTGGAATTCC+AGG | + | chr4_2:6531055-6531074 | Msa0585570:CDS | 65.0% | |
| ACGCCGCCGGAGTTCTTCGT+CGG | + | chr4_2:6529445-6529464 | Msa0585570:CDS | 65.0% | |
| CTGCCGACGAAGAACTCCGG+CGG | - | chr4_2:6529451-6529470 | None:intergenic | 65.0% | |
| GGTGGCCAGGGTTCAAACCC+TGG | + | chr4_2:6530256-6530275 | Msa0585570:intron | 65.0% | |
| GCCCCTGCTGCTGGAATTCC+AGG | + | chr4_2:6531055-6531074 | Msa0585570:CDS | 65.0% | |
| CCAGCAGCAGGGGCGGCAAC+AGG | - | chr4_2:6531049-6531068 | None:intergenic | 75.0% | |
| CCTGTTGCCGCCCCTGCTGC+TGG | + | chr4_2:6531046-6531065 | Msa0585570:CDS | 75.0% | |
| CCAGCAGCAGGGGCGGCAAC+AGG | - | chr4_2:6531049-6531068 | None:intergenic | 75.0% | |
| CCTGTTGCCGCCCCTGCTGC+TGG | + | chr4_2:6531046-6531065 | Msa0585570:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 6528104 | 6532193 | 6528104 | ID=Msa0585570;Name=Msa0585570 |
| chr4_2 | mRNA | 6528104 | 6532193 | 6528104 | ID=Msa0585570-mRNA-1;Parent=Msa0585570;Name=Msa0585570-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.4|0.33|0.83|0.4|0.5|6|271|155 |
| chr4_2 | exon | 6528104 | 6528107 | 6528104 | ID=Msa0585570-mRNA-1:exon:1600;Parent=Msa0585570-mRNA-1 |
| chr4_2 | exon | 6529431 | 6529479 | 6529431 | ID=Msa0585570-mRNA-1:exon:1601;Parent=Msa0585570-mRNA-1 |
| chr4_2 | exon | 6531021 | 6531171 | 6531021 | ID=Msa0585570-mRNA-1:exon:1602;Parent=Msa0585570-mRNA-1 |
| chr4_2 | exon | 6531184 | 6531321 | 6531184 | ID=Msa0585570-mRNA-1:exon:1603;Parent=Msa0585570-mRNA-1 |
| chr4_2 | exon | 6531709 | 6531774 | 6531709 | ID=Msa0585570-mRNA-1:exon:1604;Parent=Msa0585570-mRNA-1 |
| chr4_2 | exon | 6531863 | 6532193 | 6531863 | ID=Msa0585570-mRNA-1:exon:1605;Parent=Msa0585570-mRNA-1 |
| chr4_2 | CDS | 6528104 | 6528107 | 6528104 | ID=Msa0585570-mRNA-1:cds;Parent=Msa0585570-mRNA-1 |
| chr4_2 | CDS | 6529431 | 6529479 | 6529431 | ID=Msa0585570-mRNA-1:cds;Parent=Msa0585570-mRNA-1 |
| chr4_2 | CDS | 6531021 | 6531171 | 6531021 | ID=Msa0585570-mRNA-1:cds;Parent=Msa0585570-mRNA-1 |
| chr4_2 | CDS | 6531184 | 6531321 | 6531184 | ID=Msa0585570-mRNA-1:cds;Parent=Msa0585570-mRNA-1 |
| chr4_2 | CDS | 6531709 | 6531774 | 6531709 | ID=Msa0585570-mRNA-1:cds;Parent=Msa0585570-mRNA-1 |
| chr4_2 | CDS | 6531863 | 6531922 | 6531863 | ID=Msa0585570-mRNA-1:cds;Parent=Msa0585570-mRNA-1 |
| chr4_2 | three_prime_UTR | 6531923 | 6532193 | 6531923 | ID=Msa0585570-mRNA-1:three_prime_utr;Parent=Msa0585570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
