AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0569380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0569380 MtrunA17_Chr8g0384721 92.491 293 8 5 59 345 1 285 0.0 546
Msa0569380 MtrunA17_Chr3g0130731 69.024 297 69 7 59 342 1 287 3.13e-134 384
Msa0569380 MtrunA17_Chr3g0124761 63.087 298 87 7 59 345 1 286 6.53e-120 347
Msa0569380 MtrunA17_Chr2g0318101 67.683 164 39 3 65 216 15 176 6.30e-75 235
Msa0569380 MtrunA17_Chr2g0318081 67.702 161 47 2 63 222 14 170 6.58e-75 235
Msa0569380 MtrunA17_Chr7g0252971 56.345 197 71 2 65 246 8 204 1.10e-73 231
Msa0569380 MtrunA17_Chr8g0359921 68.944 161 47 2 63 222 12 170 1.30e-72 228
Msa0569380 MtrunA17_Chr5g0417791 64.103 156 55 1 63 217 1 156 3.28e-72 224
Msa0569380 MtrunA17_Chr4g0042561 63.871 155 55 1 64 217 8 162 3.99e-71 222
Msa0569380 MtrunA17_Chr4g0047841 64.773 176 38 4 64 216 14 188 5.06e-71 224
Msa0569380 MtrunA17_Chr2g0326361 54.545 187 72 2 65 248 14 190 1.11e-69 220
Msa0569380 MtrunA17_Chr7g0263931 55.738 183 77 2 63 241 9 191 3.34e-69 219
Msa0569380 MtrunA17_Chr2g0309891 45.259 232 113 5 63 284 4 231 1.41e-58 192
Msa0569380 MtrunA17_Chr5g0417001 40.851 235 118 6 67 283 16 247 5.02e-56 187
Msa0569380 MtrunA17_Chr8g0361731 53.165 158 66 3 67 216 16 173 3.06e-55 185
Msa0569380 MtrunA17_Chr6g0453131 50.588 170 65 3 64 220 14 177 1.98e-54 183
Msa0569380 MtrunA17_Chr6g0453451 55.484 155 66 2 63 216 18 170 7.91e-54 179
Msa0569380 MtrunA17_Chr6g0484441 52.795 161 65 3 65 222 5 157 2.11e-53 178
Msa0569380 MtrunA17_Chr6g0481091 53.503 157 66 4 65 218 6 158 2.78e-53 175
Msa0569380 MtrunA17_Chr4g0060931 55.063 158 62 3 63 216 15 167 3.30e-53 179
Msa0569380 MtrunA17_Chr3g0139331 52.469 162 68 2 65 223 11 166 5.60e-52 175
Msa0569380 MtrunA17_Chr4g0018391 47.727 176 80 4 65 234 7 176 6.16e-52 175
Msa0569380 MtrunA17_Chr8g0372121 50.311 161 70 3 65 221 6 160 6.21e-52 174
Msa0569380 MtrunA17_Chr3g0091921 54.194 155 68 2 63 216 14 166 1.78e-51 172
Msa0569380 MtrunA17_Chr5g0442771 51.205 166 72 3 67 223 20 185 2.21e-51 172
Msa0569380 MtrunA17_Chr7g0253011 51.205 166 74 2 62 222 14 177 2.81e-51 174
Msa0569380 MtrunA17_Chr5g0433781 54.037 161 67 4 63 220 4 160 3.49e-51 179
Msa0569380 MtrunA17_Chr3g0109821 54.658 161 67 3 63 220 4 161 3.78e-51 180
Msa0569380 MtrunA17_Chr4g0076731 53.247 154 64 2 67 218 56 203 7.34e-51 175
Msa0569380 MtrunA17_Chr5g0398971 45.405 185 90 4 59 237 1 180 8.69e-51 172
Msa0569380 MtrunA17_Chr1g0147421 50.289 173 72 4 59 223 17 183 1.15e-50 172
Msa0569380 MtrunA17_Chr7g0214071 52.695 167 67 4 54 217 4 161 1.28e-50 169
Msa0569380 MtrunA17_Chr2g0316971 54.140 157 63 3 65 216 23 175 1.52e-50 172
Msa0569380 MtrunA17_Chr5g0400461 49.153 177 70 4 61 227 2 168 1.59e-50 171
Msa0569380 MtrunA17_Chr4g0056541 48.795 166 74 4 65 225 7 166 2.99e-50 171
Msa0569380 MtrunA17_Chr2g0309331 48.837 172 75 4 59 223 2 167 3.43e-50 171
Msa0569380 MtrunA17_Chr5g0405211 51.592 157 66 3 65 217 8 158 8.76e-50 170
Msa0569380 MtrunA17_Chr7g0217721 48.045 179 77 4 63 227 17 193 1.05e-49 169
Msa0569380 MtrunA17_Chr1g0183741 46.739 184 84 4 65 243 10 184 3.01e-49 166
Msa0569380 MtrunA17_Chr2g0311651 42.922 219 107 7 67 271 24 238 4.45e-49 167
Msa0569380 MtrunA17_Chr4g0017921 50.318 157 67 3 65 217 8 157 2.72e-48 166
Msa0569380 MtrunA17_Chr6g0461661 51.592 157 71 2 63 216 16 170 8.44e-48 165
Msa0569380 MtrunA17_Chr2g0311661 42.081 221 108 6 67 272 23 238 8.68e-48 163
Msa0569380 MtrunA17_Chr1g0200561 42.857 189 92 4 65 243 19 201 9.61e-48 164
Msa0569380 MtrunA17_Chr7g0217711 51.634 153 67 3 63 210 17 167 4.23e-47 157
Msa0569380 MtrunA17_Chr2g0312321 42.925 212 102 6 64 270 10 207 5.33e-47 161
Msa0569380 MtrunA17_Chr7g0261411 50.000 154 66 2 65 215 10 155 8.27e-47 160
Msa0569380 MtrunA17_Chr4g0054791 56.115 139 54 3 59 191 1 138 3.98e-46 159
Msa0569380 MtrunA17_Chr8g0385991 46.243 173 87 3 61 229 10 180 1.03e-45 155
Msa0569380 MtrunA17_Chr8g0346001 44.186 172 87 3 59 221 9 180 4.32e-45 159
Msa0569380 MtrunA17_Chr5g0428991 51.899 158 65 4 65 217 25 176 1.50e-44 161
Msa0569380 MtrunA17_Chr3g0144271 52.597 154 66 4 65 214 23 173 7.13e-44 156
Msa0569380 MtrunA17_Chr3g0131911 48.780 164 75 3 61 217 10 171 2.14e-43 150
Msa0569380 MtrunA17_Chr3g0130101 45.860 157 78 3 65 218 7 159 6.52e-43 152
Msa0569380 MtrunA17_Chr3g0128151 49.682 157 68 4 65 216 22 172 3.23e-42 154
Msa0569380 MtrunA17_Chr1g0201021 45.029 171 87 4 67 234 21 187 2.00e-41 152
Msa0569380 MtrunA17_Chr3g0092671 44.624 186 93 6 62 243 2 181 9.94e-41 149
Msa0569380 MtrunA17_Chr1g0197361 44.186 172 87 5 67 234 10 176 3.14e-40 149
Msa0569380 MtrunA17_Chr8g0364791 43.038 158 83 3 64 218 5 158 5.09e-40 146
Msa0569380 MtrunA17_Chr3g0128111 45.455 154 73 4 68 216 45 192 1.44e-39 140
Msa0569380 MtrunA17_Chr1g0197351 41.206 199 105 4 47 240 24 215 1.81e-39 145
Msa0569380 MtrunA17_Chr4g0038751 46.104 154 70 4 67 216 17 161 2.19e-39 141
Msa0569380 MtrunA17_Chr8g0345671 47.436 156 66 6 64 213 10 155 1.52e-37 139
Msa0569380 MtrunA17_Chr8g0384201 41.139 158 86 3 64 218 5 158 7.10e-37 138
Msa0569380 MtrunA17_Chr4g0026141 40.936 171 92 5 65 228 5 173 1.14e-35 130
Msa0569380 MtrunA17_Chr7g0266701 32.035 231 136 7 65 283 4 225 4.86e-35 128
Msa0569380 MtrunA17_Chr4g0050701 41.401 157 79 3 65 216 11 159 9.08e-34 123
Msa0569380 MtrunA17_Chr2g0321631 34.959 246 134 10 66 294 5 241 1.18e-33 124
Msa0569380 MtrunA17_Chr3g0113001 52.033 123 57 2 110 231 10 131 5.91e-33 124
Msa0569380 MtrunA17_Chr8g0345691 40.252 159 71 6 65 213 12 156 1.49e-31 122
Msa0569380 MtrunA17_Chr2g0321741 45.528 123 54 4 93 213 20 131 1.71e-30 119
Msa0569380 MtrunA17_Chr8g0384351 42.073 164 70 6 60 222 5 144 8.06e-30 112
Msa0569380 MtrunA17_Chr8g0345711 38.125 160 85 6 65 211 12 170 3.01e-29 110
Msa0569380 MtrunA17_Chr8g0345731 42.537 134 69 4 65 190 24 157 5.04e-28 107
Msa0569380 MtrunA17_Chr3g0113031 50.459 109 45 3 128 231 3 107 1.34e-25 103
Msa0569380 MtrunA17_Chr8g0345721 36.196 163 68 5 68 195 38 199 1.34e-24 99.8
Msa0569380 MtrunA17_Chr8g0345701 37.584 149 70 6 59 187 1 146 4.13e-23 94.7
Msa0569380 MtrunA17_Chr3g0130321 33.333 165 95 5 59 214 1 159 1.17e-22 94.4
Msa0569380 MtrunA17_Chr7g0243371 54.667 75 31 1 118 189 17 91 7.29e-21 86.7
Msa0569380 MtrunA17_Chr8g0345741 36.719 128 62 4 92 214 19 132 7.98e-21 87.8
Msa0569380 MtrunA17_Chr7g0251661 30.882 136 87 4 61 192 6 138 1.15e-17 79.3
Msa0569380 MtrunA17_Chr7g0251651 31.387 137 87 4 60 192 13 146 1.47e-17 79.7
Msa0569380 MtrunA17_Chr7g0251671 29.323 133 87 4 64 192 9 138 1.12e-15 73.9
Msa0569380 MtrunA17_Chr7g0274971 31.977 172 98 8 71 232 11 173 1.11e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0569380 AT1G01720.1 62.759 290 102 5 59 345 1 287 1.43e-119 347
Msa0569380 AT5G08790.1 63.542 288 76 8 59 338 1 267 2.24e-116 338
Msa0569380 AT5G63790.1 58.387 310 82 9 41 340 26 298 3.72e-110 323
Msa0569380 AT5G63790.2 58.387 310 82 9 41 340 36 308 4.66e-110 324
Msa0569380 AT1G77450.1 60.153 261 59 7 63 320 8 226 3.99e-96 286
Msa0569380 AT1G69490.1 54.369 206 88 3 65 269 9 209 2.50e-75 233
Msa0569380 AT1G52890.1 67.702 161 47 2 63 222 12 168 7.39e-74 231
Msa0569380 AT3G15500.1 66.867 166 48 3 63 225 12 173 2.13e-73 230
Msa0569380 AT4G27410.2 64.162 173 57 2 63 234 12 180 3.24e-73 229
Msa0569380 AT1G61110.1 65.663 166 47 2 61 216 12 177 3.43e-71 224
Msa0569380 AT3G04070.2 64.596 161 48 2 65 216 10 170 1.98e-69 221
Msa0569380 AT3G04070.1 60.452 177 45 3 65 216 10 186 4.35e-69 220
Msa0569380 AT4G27410.3 58.421 190 57 3 63 234 12 197 9.79e-69 218
Msa0569380 AT3G15510.1 65.839 161 39 4 69 216 21 178 9.89e-67 214
Msa0569380 AT1G52880.1 65.409 159 42 3 69 216 21 177 2.91e-62 201
Msa0569380 AT5G39610.1 50.543 184 83 3 48 230 3 179 2.06e-57 188
Msa0569380 AT5G61430.1 51.176 170 80 2 50 218 1 168 3.91e-56 186
Msa0569380 AT5G07680.1 56.329 158 60 3 63 216 15 167 2.75e-55 184
Msa0569380 AT5G07680.2 56.329 158 60 3 63 216 1 153 2.86e-55 183
Msa0569380 AT3G18400.1 54.375 160 65 3 65 222 5 158 4.95e-55 182
Msa0569380 AT1G26870.1 51.807 166 60 3 65 216 16 175 6.13e-55 185
Msa0569380 AT5G39820.1 48.276 174 70 3 67 220 22 195 3.36e-54 181
Msa0569380 AT1G76420.1 54.777 157 63 4 65 218 22 173 5.02e-54 181
Msa0569380 AT3G29035.1 47.716 197 90 4 63 256 22 208 9.87e-54 179
Msa0569380 AT2G33480.2 54.717 159 62 3 60 217 10 159 2.40e-53 177
Msa0569380 AT5G62380.2 47.027 185 88 3 59 239 1 179 2.68e-53 179
Msa0569380 AT5G62380.1 47.027 185 88 3 59 239 1 179 2.68e-53 179
Msa0569380 AT3G04060.1 51.445 173 74 3 60 227 15 182 3.60e-53 179
Msa0569380 AT2G33480.1 55.346 159 63 4 60 217 10 161 4.25e-53 176
Msa0569380 AT3G03200.1 53.503 157 67 3 63 216 4 157 1.03e-52 181
Msa0569380 AT3G17730.1 52.866 157 67 3 65 218 6 158 1.58e-52 174
Msa0569380 AT2G24430.2 52.469 162 69 3 65 223 16 172 1.74e-52 176
Msa0569380 AT2G24430.1 52.469 162 69 3 65 223 16 172 1.74e-52 176
Msa0569380 AT5G17260.1 54.140 157 66 3 63 216 4 157 2.03e-51 177
Msa0569380 AT2G43000.1 51.656 151 69 2 67 216 20 167 6.39e-51 171
Msa0569380 AT5G53950.1 53.416 161 58 3 65 216 17 169 6.66e-51 174
Msa0569380 AT2G02450.1 52.597 154 65 2 67 218 53 200 1.31e-50 173
Msa0569380 AT2G02450.2 52.597 154 65 2 67 218 53 200 1.70e-50 174
Msa0569380 AT3G15170.1 50.299 167 66 3 65 222 20 178 1.88e-50 171
Msa0569380 AT5G13180.1 55.000 160 61 3 61 217 10 161 1.93e-50 169
Msa0569380 AT1G12260.2 43.000 200 97 5 59 250 1 191 2.16e-50 171
Msa0569380 AT4G36160.2 49.419 172 75 4 50 217 1 164 2.26e-50 172
Msa0569380 AT5G18270.1 52.469 162 61 3 63 216 19 172 4.29e-50 170
Msa0569380 AT5G18270.2 52.469 162 61 3 63 216 19 172 4.87e-50 170
Msa0569380 AT1G62700.1 49.080 163 73 3 59 217 1 157 5.22e-50 172
Msa0569380 AT1G62700.2 49.080 163 73 3 59 217 1 157 5.22e-50 172
Msa0569380 AT1G12260.1 43.000 200 97 5 59 250 1 191 5.23e-50 172
Msa0569380 AT4G36160.1 51.250 160 68 3 62 217 7 160 5.50e-50 171
Msa0569380 AT4G36160.3 51.250 160 68 3 62 217 7 160 5.50e-50 171
Msa0569380 AT5G46590.1 51.875 160 70 4 61 216 2 158 7.57e-50 169
Msa0569380 AT2G18060.3 49.689 161 71 3 62 218 6 160 8.68e-50 171
Msa0569380 AT2G18060.1 49.689 161 71 3 62 218 6 160 8.68e-50 171
Msa0569380 AT1G56010.2 49.432 176 82 4 64 235 18 190 9.18e-50 169
Msa0569380 AT1G79580.3 47.619 168 76 3 61 223 13 173 1.93e-49 170
Msa0569380 AT1G79580.5 47.619 168 76 3 61 223 13 173 1.93e-49 170
Msa0569380 AT1G79580.4 47.619 168 76 3 61 223 13 173 1.93e-49 170
Msa0569380 AT1G79580.2 47.619 168 76 3 61 223 13 173 1.93e-49 170
Msa0569380 AT1G79580.1 47.619 168 76 3 61 223 13 173 1.93e-49 170
Msa0569380 AT4G17980.1 51.553 161 71 4 61 216 2 160 2.27e-49 166
Msa0569380 AT3G10490.1 46.703 182 84 4 62 240 24 195 2.32e-49 166
Msa0569380 AT4G17980.2 51.553 161 71 4 61 216 2 160 4.04e-49 167
Msa0569380 AT4G10350.1 48.256 172 81 3 65 232 9 176 6.22e-49 167
Msa0569380 AT1G71930.2 49.359 156 69 3 65 216 9 158 7.60e-49 167
Msa0569380 AT1G71930.1 49.359 156 69 3 65 216 9 158 7.60e-49 167
Msa0569380 AT1G54330.1 51.534 163 69 3 63 222 4 159 1.37e-48 166
Msa0569380 AT3G10480.1 46.703 182 84 4 62 240 24 195 2.01e-48 169
Msa0569380 AT3G12977.1 50.327 153 72 2 65 216 18 167 3.37e-48 164
Msa0569380 AT1G33280.1 48.193 166 75 3 65 226 8 166 4.30e-48 164
Msa0569380 AT5G46590.2 53.472 144 63 2 61 200 2 145 4.95e-48 163
Msa0569380 AT1G65910.1 51.205 166 71 4 63 222 4 165 5.26e-48 171
Msa0569380 AT5G66300.1 49.080 163 74 3 62 220 9 166 5.72e-48 164
Msa0569380 AT3G10480.2 47.253 182 82 5 62 240 24 194 5.98e-48 167
Msa0569380 AT3G10490.2 46.703 182 84 4 62 240 24 195 1.11e-47 167
Msa0569380 AT3G61910.1 39.500 200 108 3 59 245 5 204 2.16e-47 163
Msa0569380 AT1G32510.1 46.524 187 86 4 59 235 1 183 2.69e-47 162
Msa0569380 AT2G46770.1 44.767 172 82 3 59 217 10 181 7.43e-47 163
Msa0569380 AT1G33060.1 42.793 222 109 6 51 266 7 216 9.11e-47 168
Msa0569380 AT1G33060.2 42.793 222 109 6 51 266 7 216 9.60e-47 168
Msa0569380 AT5G24590.2 46.067 178 85 4 65 238 13 183 7.91e-46 162
Msa0569380 AT4G28530.1 46.821 173 63 4 64 216 9 172 1.69e-45 159
Msa0569380 AT1G32770.1 44.379 169 84 3 59 217 10 178 2.53e-45 159
Msa0569380 AT4G35580.3 52.229 157 64 4 65 216 9 159 2.58e-45 162
Msa0569380 AT4G35580.2 52.229 157 64 4 65 216 9 159 2.61e-45 162
Msa0569380 AT4G35580.1 52.229 157 64 4 65 216 9 159 3.92e-45 161
Msa0569380 AT3G10480.3 40.741 216 82 5 61 240 23 228 1.13e-44 160
Msa0569380 AT3G49530.2 44.571 175 89 3 65 235 13 183 1.49e-44 158
Msa0569380 AT3G49530.1 44.571 175 89 3 65 235 13 183 3.97e-44 158
Msa0569380 AT3G10500.1 49.045 157 73 3 65 218 9 161 4.39e-44 159
Msa0569380 AT3G12910.1 48.315 178 76 7 60 223 17 192 3.44e-43 151
Msa0569380 AT1G34180.3 43.860 171 89 3 67 234 18 184 1.09e-42 154
Msa0569380 AT5G04410.1 47.771 157 75 3 65 218 9 161 1.69e-42 155
Msa0569380 AT2G17040.1 47.097 155 67 4 67 216 8 152 3.62e-42 148
Msa0569380 AT1G34180.1 43.860 171 89 3 67 234 18 184 6.71e-42 154
Msa0569380 AT1G34190.1 42.690 171 91 3 67 234 18 184 1.77e-40 149
Msa0569380 AT1G34180.4 41.530 183 88 3 67 234 18 196 2.31e-40 147
Msa0569380 AT5G09330.5 44.720 161 82 4 61 218 2 158 4.28e-40 147
Msa0569380 AT5G09330.2 44.720 161 82 4 61 218 2 158 4.28e-40 147
Msa0569380 AT5G09330.4 44.720 161 82 4 61 218 2 158 4.28e-40 147
Msa0569380 AT5G09330.3 44.720 161 82 4 61 218 2 158 4.28e-40 147
Msa0569380 AT5G09330.1 44.720 161 82 4 61 218 2 158 4.28e-40 147
Msa0569380 AT3G44290.2 33.898 236 125 7 67 297 16 225 8.43e-40 140
Msa0569380 AT1G34180.2 41.530 183 88 3 67 234 18 196 1.19e-39 147
Msa0569380 AT2G27300.1 45.033 151 70 3 65 213 14 153 7.18e-39 141
Msa0569380 AT5G64060.1 40.678 177 98 4 61 234 2 174 1.34e-38 140
Msa0569380 AT3G44290.1 34.061 229 120 7 67 290 16 218 1.64e-38 140
Msa0569380 AT5G22290.1 42.857 154 74 4 67 217 23 165 1.44e-37 137
Msa0569380 AT1G32870.3 47.977 173 77 6 51 218 34 198 3.17e-37 140
Msa0569380 AT1G32870.2 50.314 159 68 5 65 218 10 162 7.29e-37 139
Msa0569380 AT1G32870.1 50.314 159 68 5 65 218 10 162 9.63e-37 139
Msa0569380 AT5G61430.2 55.856 111 46 2 113 222 1 109 2.40e-34 127
Msa0569380 AT1G56010.1 50.000 126 57 3 113 235 1 123 3.36e-33 124
Msa0569380 AT5G22380.1 34.538 249 126 11 62 295 2 228 1.04e-32 122
Msa0569380 AT5G64530.1 39.205 176 82 4 63 225 1 164 3.29e-32 119
Msa0569380 AT3G44350.2 38.983 177 87 8 64 228 4 171 4.61e-32 120
Msa0569380 AT2G33480.3 56.436 101 39 3 118 217 8 104 1.23e-31 118
Msa0569380 AT5G04395.1 40.268 149 72 3 65 196 28 176 4.39e-31 116
Msa0569380 AT3G12977.2 50.926 108 49 2 110 216 10 114 6.78e-31 117
Msa0569380 AT3G44350.1 38.509 161 79 6 64 209 4 159 2.28e-30 114
Msa0569380 AT4G10350.2 50.000 116 53 2 118 232 18 129 2.48e-30 117
Msa0569380 AT5G64530.2 45.385 130 56 3 63 189 1 118 1.07e-29 112
Msa0569380 AT4G28530.2 37.059 170 47 3 64 216 9 135 1.31e-28 113
Msa0569380 AT4G01550.1 40.769 130 70 3 68 190 7 136 5.23e-26 108
Msa0569380 AT4G01520.1 32.338 201 114 6 66 253 5 196 1.06e-25 105
Msa0569380 AT4G01540.4 32.461 191 109 6 68 247 7 188 1.00e-24 103
Msa0569380 AT4G01540.3 32.461 191 109 6 68 247 7 188 1.29e-24 103
Msa0569380 AT4G01540.2 35.057 174 96 5 68 233 7 171 1.47e-24 103
Msa0569380 AT4G01540.1 34.483 174 97 5 68 233 7 171 1.68e-24 104
Msa0569380 AT3G04420.2 40.769 130 72 3 63 187 1 130 3.63e-23 97.8
Msa0569380 AT3G04420.1 40.769 130 72 3 63 187 1 130 7.55e-23 97.8
Msa0569380 AT1G02230.1 36.296 135 75 4 66 192 4 135 2.99e-22 96.7
Msa0569380 AT2G43000.2 47.253 91 44 2 127 216 2 89 7.05e-22 92.0
Msa0569380 AT5G14000.2 36.000 150 91 3 59 205 9 156 5.20e-21 88.6
Msa0569380 AT5G14000.1 33.742 163 96 4 59 218 9 162 1.12e-20 89.0
Msa0569380 AT3G10490.4 45.192 104 46 3 138 240 2 95 2.36e-20 90.9
Msa0569380 AT3G10490.3 45.192 104 46 3 138 240 2 95 2.36e-20 90.9
Msa0569380 AT3G56530.1 34.395 157 87 6 65 214 52 199 5.86e-20 89.4
Msa0569380 AT1G02220.1 33.333 165 93 5 63 222 1 153 6.34e-20 90.5
Msa0569380 AT1G02250.1 38.462 130 69 4 66 187 4 130 1.63e-19 89.0
Msa0569380 AT1G01010.1 34.532 139 74 5 63 187 1 136 6.90e-17 81.6
Msa0569380 AT2G18060.2 46.753 77 34 2 143 218 2 72 2.02e-15 75.9
Msa0569380 AT5G50820.1 33.577 137 74 6 62 191 14 140 1.30e-13 68.9
Msa0569380 AT5G22290.2 42.105 76 31 3 144 217 2 66 2.69e-11 63.5
Msa0569380 AT4G29230.1 33.333 153 72 8 65 190 48 197 7.20e-11 63.5
Msa0569380 AT4G29230.2 33.333 153 72 8 65 190 47 196 7.73e-11 63.5
Msa0569380 AT4G29230.3 33.117 154 73 8 65 191 48 198 9.31e-11 63.2

Find 124 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTAGGGTTTGTTGAATT+TGG 0.180719 4_1:-71229286 Msa0569380:three_prime_UTR
ATCCAATTAGGCATGTTATT+AGG 0.202654 4_1:-71229156 Msa0569380:three_prime_UTR
AAATCAATTTCTTTGATAAT+AGG 0.219498 4_1:+71230487 None:intergenic
TCCAATTAGGCATGTTATTA+GGG 0.225184 4_1:-71229155 Msa0569380:three_prime_UTR
AATGACCATTTGGGAGGATT+AGG 0.250459 4_1:-71229449 Msa0569380:three_prime_UTR
TGAAAATCAAAGGCTGAAAC+TGG 0.273975 4_1:+71229643 None:intergenic
CCCCTAATAACATGCCTAAT+TGG 0.277744 4_1:+71229154 None:intergenic
GGGCTGCGGGAACCGGATAT+TGG 0.287906 4_1:-71230265 Msa0569380:CDS
TACTAGGGTTTGTTGAATTT+GGG 0.300795 4_1:-71229285 Msa0569380:three_prime_UTR
TTGATAATAGGAACAGCTAT+AGG 0.303758 4_1:+71230499 None:intergenic
GAAAATTGAAAATGACCATT+TGG 0.304176 4_1:-71229459 Msa0569380:three_prime_UTR
GGCATGTTATTAGGGGTATA+TGG 0.340002 4_1:-71229147 Msa0569380:three_prime_UTR
TTCTTTATCCCAAGTGCCTT+CGG 0.348007 4_1:+71230209 None:intergenic
TTTACAGAAATGGCTCTTTA+CGG 0.351320 4_1:-71230353 Msa0569380:intron
TTTGATCCATGGCATCTTCC+AGG 0.357407 4_1:-71230457 Msa0569380:intron
AATAACAAATTAAATTTACT+TGG 0.360188 4_1:+71229519 None:intergenic
AACCCGAAAATTGATTCATT+TGG 0.363530 4_1:+71229566 None:intergenic
AAAATTGAAAATGACCATTT+GGG 0.367814 4_1:-71229458 Msa0569380:three_prime_UTR
AAGTGGAATGAATTTGTATT+GGG 0.373773 4_1:-71229673 Msa0569380:CDS
ATTAATTGCAGCTTGATGAT+TGG 0.376520 4_1:-71229948 Msa0569380:intron
TAATGGTGCATGTCTGATCT+TGG 0.383752 4_1:-71229317 Msa0569380:three_prime_UTR
TTCTACTCAAATAATAGAAA+TGG 0.386280 4_1:+71229074 None:intergenic
CCGAACCGGGCTGCGGGAAC+CGG 0.391909 4_1:-71230272 Msa0569380:CDS
AGTGTTACTGTTAACATGTA+AGG 0.392554 4_1:-71229119 Msa0569380:three_prime_UTR
AGGATTAGGGATCCTAAAAT+TGG 0.395578 4_1:-71229435 Msa0569380:three_prime_UTR
ATGACCATTTGGGAGGATTA+GGG 0.396512 4_1:-71229448 Msa0569380:three_prime_UTR
CCAAAGGAATTAAAACCAAT+TGG 0.402035 4_1:-71230157 Msa0569380:CDS
CGGTTCGGCCTTGAACCGTT+TGG 0.403070 4_1:+71230287 None:intergenic
TTAATTGCAGCTTGATGATT+GGG 0.410149 4_1:-71229947 Msa0569380:intron
CCGGTTCCCGCAGCCCGGTT+CGG 0.410215 4_1:+71230272 None:intergenic
TCAAAGGCTGAAACTGGGTC+TGG 0.410879 4_1:+71229649 None:intergenic
TGAGTTCGAAGTTGTGAGAA+AGG 0.411148 4_1:+71230739 None:intergenic
AGTTGCAGTTAGTATTTGTT+TGG 0.411894 4_1:+71229354 None:intergenic
CAAGTGGAATGAATTTGTAT+TGG 0.415048 4_1:-71229674 Msa0569380:CDS
AGTGTTGGTTGGTGGCTGCT+AGG 0.418122 4_1:+71230688 None:intergenic
TGGTTGAAATTTAAGAAAAG+TGG 0.419169 4_1:-71229239 Msa0569380:three_prime_UTR
GTAAATATCCAAACGGTTCA+AGG 0.423042 4_1:-71230295 Msa0569380:CDS
TGTCGAATTTACAACAAGAA+AGG 0.430099 4_1:-71229919 Msa0569380:CDS
ATCTTGGGTAGGTGATTACT+AGG 0.434038 4_1:-71229301 Msa0569380:three_prime_UTR
TCTTCTTCTTCAGTGTTGGT+TGG 0.434262 4_1:+71230677 None:intergenic
AACTAGGTGAAGATCCAATT+AGG 0.434662 4_1:-71229168 Msa0569380:three_prime_UTR
TACTGATCCTGAGGGGCAAA+AGG 0.435530 4_1:+71229589 None:intergenic
CAAATTAAATTTACTTGGGC+AGG 0.439187 4_1:+71229524 None:intergenic
CAAACGGTTCAAGGCCGAAC+CGG 0.440323 4_1:-71230286 Msa0569380:CDS
TTCAAGGCCGAACCGGGCTG+CGG 0.445265 4_1:-71230279 Msa0569380:CDS
CAATACAAATTCATTCCACT+TGG 0.450741 4_1:+71229675 None:intergenic
AATAGAAATAGGTCATGGTC+TGG 0.452417 4_1:-71229487 Msa0569380:three_prime_UTR
AATGGTGCATGTCTGATCTT+GGG 0.455923 4_1:-71229316 Msa0569380:three_prime_UTR
TGATAATAGGAACAGCTATA+GGG 0.457703 4_1:+71230500 None:intergenic
ATAGAAATAGGTCATGGTCT+GGG 0.460816 4_1:-71229486 Msa0569380:three_prime_UTR
GCAGTTAGTATTTGTTTGGT+AGG 0.465487 4_1:+71229358 None:intergenic
TCTTCTTCAGTGTTGGTTGG+TGG 0.470870 4_1:+71230680 None:intergenic
GGTTGAAATTTAAGAAAAGT+GGG 0.472430 4_1:-71229238 Msa0569380:three_prime_UTR
TTTGGATATTTACGATCCCT+TGG 0.476106 4_1:+71230305 None:intergenic
TCCGGTCGCCTTCCAATATC+CGG 0.478603 4_1:+71230253 None:intergenic
CCTAAAATTGGAGGGTCCCA+TGG 0.480588 4_1:-71229423 Msa0569380:three_prime_UTR
TCAAGGCCGAACCGGGCTGC+GGG 0.480914 4_1:-71230278 Msa0569380:CDS
TCCAATCGGCTTATCAGCTC+CGG 0.481369 4_1:+71230235 None:intergenic
CGTGGTTTCACCGTGCGATA+AGG 0.482787 4_1:-71229713 Msa0569380:CDS
CAGTTGAATCTTATGGATGA+TGG 0.485236 4_1:-71229622 Msa0569380:CDS
CAAAGGCTGAAACTGGGTCT+GGG 0.487541 4_1:+71229650 None:intergenic
ATTGGAAAGCCGAAGGCACT+TGG 0.488594 4_1:-71230218 Msa0569380:CDS
GTCGAATTTACAACAAGAAA+GGG 0.491222 4_1:-71229918 Msa0569380:CDS
AATGATCTCGATTCTCAACT+AGG 0.492084 4_1:-71229184 Msa0569380:three_prime_UTR
ATACTCGTGCATGATCCAAT+TGG 0.497532 4_1:+71230142 None:intergenic
TGTGAGAAAGGAAGAAGTTG+TGG 0.504684 4_1:+71230751 None:intergenic
GTGTTGGTTGGTGGCTGCTA+GGG 0.507815 4_1:+71230689 None:intergenic
ACTGCAAGTGGAGCTTCTAA+TGG 0.512363 4_1:-71229334 Msa0569380:three_prime_UTR
TTCATTTGGTACTGATCCTG+AGG 0.513979 4_1:+71229580 None:intergenic
CACTATTCCTAAAATCATCC+TGG 0.521129 4_1:+71229803 None:intergenic
AATATCCGGTTCCCGCAGCC+CGG 0.524402 4_1:+71230267 None:intergenic
AGTGCCTTCGGCTTTCCAAT+CGG 0.524558 4_1:+71230221 None:intergenic
ATTTGTATAAGTTTGATCCA+TGG 0.528456 4_1:-71230468 Msa0569380:CDS
AAACGGTTCAAGGCCGAACC+GGG 0.528831 4_1:-71230285 Msa0569380:CDS
ATACTAACTGCAACTGCAAG+TGG 0.529536 4_1:-71229346 Msa0569380:three_prime_UTR
GCTGCTAGGGTAGTTAGTAT+TGG 0.532321 4_1:+71230702 None:intergenic
TCAGATCAAGATGAACGGCC+AGG 0.532358 4_1:-71229821 Msa0569380:CDS
GTCGGGTGAAATCTGAAGCC+AGG 0.534952 4_1:+71230571 None:intergenic
GTACACTGACACATCAGATT+CGG 0.536856 4_1:-71229773 Msa0569380:CDS
TGGCCGTTCATCTTGATCTG+AGG 0.540560 4_1:+71229823 None:intergenic
ACCGGATATTGGAAGGCGAC+CGG 0.540712 4_1:-71230254 Msa0569380:CDS
TCTTGGGTAGGTGATTACTA+GGG 0.549155 4_1:-71229300 Msa0569380:three_prime_UTR
GGATCCCTAATCCTCCCAAA+TGG 0.552239 4_1:+71229444 None:intergenic
TGCGGGAACCGGATATTGGA+AGG 0.555135 4_1:-71230261 Msa0569380:CDS
ATAACAAATTAAATTTACTT+GGG 0.555352 4_1:+71229520 None:intergenic
TGACAAGCTCATCATCAGTC+GGG 0.555923 4_1:+71230554 None:intergenic
ACCGGAGCTGATAAGCCGAT+TGG 0.556049 4_1:-71230236 Msa0569380:CDS
ACTGATCCTGAGGGGCAAAA+GGG 0.560321 4_1:+71229590 None:intergenic
GCTTCCTCAGAAAACATTGG+TGG 0.561789 4_1:+71229868 None:intergenic
CTCTTTACGGTGAGAAAGAG+TGG 0.566657 4_1:-71230340 Msa0569380:CDS
AAGATTCAACTGAAAATCAA+AGG 0.566776 4_1:+71229633 None:intergenic
ATGTACATACTCTTAAATTG+TGG 0.566838 4_1:+71230081 None:intergenic
CTCAAGCGGTTCTGAGCACG+TGG 0.568997 4_1:-71229731 Msa0569380:CDS
ATTAGGGATCCTAAAATTGG+AGG 0.571106 4_1:-71229432 Msa0569380:three_prime_UTR
TGAGCTTCCTCAGAAAACAT+TGG 0.577453 4_1:+71229865 None:intergenic
ATTGAATATACGCGAATGCA+AGG 0.577743 4_1:-71230610 Msa0569380:CDS
TAAGTACCTGGAAGATGCCA+TGG 0.577977 4_1:+71230451 None:intergenic
ATTGAAAATGACCATTTGGG+AGG 0.580131 4_1:-71229455 Msa0569380:three_prime_UTR
CTTTGAACTTCCTTATCGCA+CGG 0.587532 4_1:+71229703 None:intergenic
AGGGATCGTAAATATCCAAA+CGG 0.593976 4_1:-71230302 Msa0569380:CDS
TTGACAAGCTCATCATCAGT+CGG 0.594991 4_1:+71230553 None:intergenic
GAAAATCAAAGGCTGAAACT+GGG 0.599958 4_1:+71229644 None:intergenic
AATACAAATTCATTCCACTT+GGG 0.602517 4_1:+71229676 None:intergenic
ACACATCAGATTCGGTGCCA+CGG 0.603238 4_1:-71229765 Msa0569380:CDS
TCATTTGGTACTGATCCTGA+GGG 0.603683 4_1:+71229581 None:intergenic
GTTGAAATTTAAGAAAAGTG+GGG 0.606864 4_1:-71229237 Msa0569380:three_prime_UTR
TAGAAATAGGTCATGGTCTG+GGG 0.608175 4_1:-71229485 Msa0569380:three_prime_UTR
AAGTTCAAAGTGAGCCCAAG+TGG 0.609329 4_1:-71229690 Msa0569380:CDS
TTGGAAAGCCGAAGGCACTT+GGG 0.610579 4_1:-71230217 Msa0569380:CDS
CGGTTTCACACCGACTCAAG+CGG 0.614416 4_1:-71229745 Msa0569380:CDS
TTAGGGATCCTAAAATTGGA+GGG 0.619634 4_1:-71229431 Msa0569380:three_prime_UTR
TTAGTAATAGAAATAGGTCA+TGG 0.629502 4_1:-71229492 Msa0569380:three_prime_UTR
GTGCTCAGAACCGCTTGAGT+CGG 0.630980 4_1:+71229735 None:intergenic
CTTGAGTCGGTGTGAAACCG+TGG 0.640274 4_1:+71229748 None:intergenic
AATAGGAACAGCTATAGGGA+GGG 0.642151 4_1:+71230504 None:intergenic
GGAGCATTAGAATTACCACC+TGG 0.643311 4_1:-71230589 Msa0569380:CDS
CCAATTAGGCATGTTATTAG+GGG 0.644452 4_1:-71229154 Msa0569380:three_prime_UTR
TAATAGGAACAGCTATAGGG+AGG 0.649675 4_1:+71230503 None:intergenic
TATGCTGGCAAAGCTCCCAA+AGG 0.653423 4_1:-71230173 Msa0569380:CDS
AAACCTCAGATCAAGATGAA+CGG 0.656051 4_1:-71229826 Msa0569380:CDS
GTGCATGTCTGATCTTGGGT+AGG 0.661579 4_1:-71229312 Msa0569380:three_prime_UTR
TAAGCCGATTGGAAAGCCGA+AGG 0.696583 4_1:-71230225 Msa0569380:CDS
GGGTGAAATCTGAAGCCAGG+TGG 0.722817 4_1:+71230574 None:intergenic
CATTTGGTACTGATCCTGAG+GGG 0.747553 4_1:+71229582 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAATTAAATTTACTT+GGG + chr4_1:71230320-71230339 None:intergenic 10.0%
!! AATAACAAATTAAATTTACT+TGG + chr4_1:71230321-71230340 None:intergenic 10.0%
!! ATAACAAATTAAATTTACTT+GGG + chr4_1:71230320-71230339 None:intergenic 10.0%
!! AATAACAAATTAAATTTACT+TGG + chr4_1:71230321-71230340 None:intergenic 10.0%
!!! AAATCAATTTCTTTGATAAT+AGG + chr4_1:71229353-71229372 None:intergenic 15.0%
!!! ATATTTTAATGCTAATTATG+TGG - chr4_1:71229448-71229467 Msa0569380:three_prime_UTR 15.0%
!!! ATATTGATTTTTCATTAGTA+TGG - chr4_1:71230578-71230597 Msa0569380:CDS 15.0%
!!! AAATCAATTTCTTTGATAAT+AGG + chr4_1:71229353-71229372 None:intergenic 15.0%
!!! ATATTTTAATGCTAATTATG+TGG - chr4_1:71229448-71229467 Msa0569380:three_prime_UTR 15.0%
!!! ATATTGATTTTTCATTAGTA+TGG - chr4_1:71230578-71230597 Msa0569380:CDS 15.0%
!!! TCTTAAATTGTGGTTATTTT+TGG + chr4_1:71229749-71229768 None:intergenic 20.0%
!!! TTTTCGTTAGTAATAGAAAT+AGG - chr4_1:71230339-71230358 Msa0569380:CDS 20.0%
!! AAAATTGAAAATGACCATTT+GGG - chr4_1:71230379-71230398 Msa0569380:intron 20.0%
!! AACCAATTTAAAAAATCCAT+GGG + chr4_1:71230433-71230452 None:intergenic 20.0%
!! TTCTACTCAAATAATAGAAA+TGG + chr4_1:71230766-71230785 None:intergenic 20.0%
!!! TCTTAAATTGTGGTTATTTT+TGG + chr4_1:71229749-71229768 None:intergenic 20.0%
!!! TTTTCGTTAGTAATAGAAAT+AGG - chr4_1:71230339-71230358 Msa0569380:CDS 20.0%
!! AAAATTGAAAATGACCATTT+GGG - chr4_1:71230379-71230398 Msa0569380:intron 20.0%
!! AACCAATTTAAAAAATCCAT+GGG + chr4_1:71230433-71230452 None:intergenic 20.0%
!! TTCTACTCAAATAATAGAAA+TGG + chr4_1:71230766-71230785 None:intergenic 20.0%
! ATTTGTATAAGTTTGATCCA+TGG - chr4_1:71229369-71229388 Msa0569380:three_prime_UTR 25.0%
! GTTGTATGTATTTACAGAAA+TGG - chr4_1:71229474-71229493 Msa0569380:three_prime_UTR 25.0%
!!! CAATTGGTTTTAATTCCTTT+GGG + chr4_1:71229682-71229701 None:intergenic 25.0%
! ATGTACATACTCTTAAATTG+TGG + chr4_1:71229759-71229778 None:intergenic 25.0%
! AATACAAATTCATTCCACTT+GGG + chr4_1:71230164-71230183 None:intergenic 25.0%
! AAGTGGAATGAATTTGTATT+GGG - chr4_1:71230164-71230183 Msa0569380:CDS 25.0%
! AAGATTCAACTGAAAATCAA+AGG + chr4_1:71230207-71230226 None:intergenic 25.0%
!! TGATTTTCAGTTGAATCTTA+TGG - chr4_1:71230208-71230227 Msa0569380:CDS 25.0%
!! GTACCAAATGAATCAATTTT+CGG - chr4_1:71230268-71230287 Msa0569380:CDS 25.0%
!! TACCAAATGAATCAATTTTC+GGG - chr4_1:71230269-71230288 Msa0569380:CDS 25.0%
! TTAGTAATAGAAATAGGTCA+TGG - chr4_1:71230345-71230364 Msa0569380:CDS 25.0%
! GAAAATTGAAAATGACCATT+TGG - chr4_1:71230378-71230397 Msa0569380:intron 25.0%
! CAACCAATTTAAAAAATCCA+TGG + chr4_1:71230434-71230453 None:intergenic 25.0%
! TGGTTGAAATTTAAGAAAAG+TGG - chr4_1:71230598-71230617 Msa0569380:CDS 25.0%
! GGTTGAAATTTAAGAAAAGT+GGG - chr4_1:71230599-71230618 Msa0569380:CDS 25.0%
! GTTGAAATTTAAGAAAAGTG+GGG - chr4_1:71230600-71230619 Msa0569380:CDS 25.0%
! ATTTGTATAAGTTTGATCCA+TGG - chr4_1:71229369-71229388 Msa0569380:three_prime_UTR 25.0%
! GTTGTATGTATTTACAGAAA+TGG - chr4_1:71229474-71229493 Msa0569380:three_prime_UTR 25.0%
!!! CAATTGGTTTTAATTCCTTT+GGG + chr4_1:71229682-71229701 None:intergenic 25.0%
! ATGTACATACTCTTAAATTG+TGG + chr4_1:71229759-71229778 None:intergenic 25.0%
! AATACAAATTCATTCCACTT+GGG + chr4_1:71230164-71230183 None:intergenic 25.0%
! AAGTGGAATGAATTTGTATT+GGG - chr4_1:71230164-71230183 Msa0569380:CDS 25.0%
! AAGATTCAACTGAAAATCAA+AGG + chr4_1:71230207-71230226 None:intergenic 25.0%
!! TGATTTTCAGTTGAATCTTA+TGG - chr4_1:71230208-71230227 Msa0569380:CDS 25.0%
!! GTACCAAATGAATCAATTTT+CGG - chr4_1:71230268-71230287 Msa0569380:CDS 25.0%
!! TACCAAATGAATCAATTTTC+GGG - chr4_1:71230269-71230288 Msa0569380:CDS 25.0%
! TTAGTAATAGAAATAGGTCA+TGG - chr4_1:71230345-71230364 Msa0569380:CDS 25.0%
! GAAAATTGAAAATGACCATT+TGG - chr4_1:71230378-71230397 Msa0569380:intron 25.0%
! CAACCAATTTAAAAAATCCA+TGG + chr4_1:71230434-71230453 None:intergenic 25.0%
! TGGTTGAAATTTAAGAAAAG+TGG - chr4_1:71230598-71230617 Msa0569380:CDS 25.0%
! GGTTGAAATTTAAGAAAAGT+GGG - chr4_1:71230599-71230618 Msa0569380:CDS 25.0%
! GTTGAAATTTAAGAAAAGTG+GGG - chr4_1:71230600-71230619 Msa0569380:CDS 25.0%
!!! AAGAAGTTGTGGTTTTATAG+GGG + chr4_1:71229078-71229097 None:intergenic 30.0%
!!! GAAGAAGTTGTGGTTTTATA+GGG + chr4_1:71229079-71229098 None:intergenic 30.0%
TGATAATAGGAACAGCTATA+GGG + chr4_1:71229340-71229359 None:intergenic 30.0%
! TTGATAATAGGAACAGCTAT+AGG + chr4_1:71229341-71229360 None:intergenic 30.0%
GAAAATAAAGAGTAAGTACC+TGG + chr4_1:71229401-71229420 None:intergenic 30.0%
TTTACAGAAATGGCTCTTTA+CGG - chr4_1:71229484-71229503 Msa0569380:three_prime_UTR 30.0%
!!! CCAATTGGTTTTAATTCCTT+TGG + chr4_1:71229683-71229702 None:intergenic 30.0%
CCAAAGGAATTAAAACCAAT+TGG - chr4_1:71229680-71229699 Msa0569380:CDS 30.0%
!!! ATTGTGGTTATTTTTGGAAG+CGG + chr4_1:71229743-71229762 None:intergenic 30.0%
ATCATCAAGCTGCAATTAAT+CGG + chr4_1:71229889-71229908 None:intergenic 30.0%
! ATTAATTGCAGCTTGATGAT+TGG - chr4_1:71229889-71229908 Msa0569380:CDS 30.0%
! TTAATTGCAGCTTGATGATT+GGG - chr4_1:71229890-71229909 Msa0569380:CDS 30.0%
TGTCGAATTTACAACAAGAA+AGG - chr4_1:71229918-71229937 Msa0569380:CDS 30.0%
GTCGAATTTACAACAAGAAA+GGG - chr4_1:71229919-71229938 Msa0569380:CDS 30.0%
CAATACAAATTCATTCCACT+TGG + chr4_1:71230165-71230184 None:intergenic 30.0%
CAAGTGGAATGAATTTGTAT+TGG - chr4_1:71230163-71230182 Msa0569380:CDS 30.0%
! AACCCGAAAATTGATTCATT+TGG + chr4_1:71230274-71230293 None:intergenic 30.0%
!!! AAATGAATCAATTTTCGGGT+TGG - chr4_1:71230273-71230292 Msa0569380:CDS 30.0%
CAAATTAAATTTACTTGGGC+AGG + chr4_1:71230316-71230335 None:intergenic 30.0%
!!! GTCCCATGGATTTTTTAAAT+TGG - chr4_1:71230428-71230447 Msa0569380:intron 30.0%
AGTTGCAGTTAGTATTTGTT+TGG + chr4_1:71230486-71230505 None:intergenic 30.0%
!! TTACTAGGGTTTGTTGAATT+TGG - chr4_1:71230551-71230570 Msa0569380:CDS 30.0%
!! TACTAGGGTTTGTTGAATTT+GGG - chr4_1:71230552-71230571 Msa0569380:CDS 30.0%
ATCCAATTAGGCATGTTATT+AGG - chr4_1:71230681-71230700 Msa0569380:CDS 30.0%
TCCAATTAGGCATGTTATTA+GGG - chr4_1:71230682-71230701 Msa0569380:CDS 30.0%
! AGTGTTACTGTTAACATGTA+AGG - chr4_1:71230718-71230737 Msa0569380:CDS 30.0%
!!! AAGAAGTTGTGGTTTTATAG+GGG + chr4_1:71229078-71229097 None:intergenic 30.0%
!!! GAAGAAGTTGTGGTTTTATA+GGG + chr4_1:71229079-71229098 None:intergenic 30.0%
TGATAATAGGAACAGCTATA+GGG + chr4_1:71229340-71229359 None:intergenic 30.0%
! TTGATAATAGGAACAGCTAT+AGG + chr4_1:71229341-71229360 None:intergenic 30.0%
GAAAATAAAGAGTAAGTACC+TGG + chr4_1:71229401-71229420 None:intergenic 30.0%
TTTACAGAAATGGCTCTTTA+CGG - chr4_1:71229484-71229503 Msa0569380:three_prime_UTR 30.0%
!!! CCAATTGGTTTTAATTCCTT+TGG + chr4_1:71229683-71229702 None:intergenic 30.0%
CCAAAGGAATTAAAACCAAT+TGG - chr4_1:71229680-71229699 Msa0569380:CDS 30.0%
!!! ATTGTGGTTATTTTTGGAAG+CGG + chr4_1:71229743-71229762 None:intergenic 30.0%
ATCATCAAGCTGCAATTAAT+CGG + chr4_1:71229889-71229908 None:intergenic 30.0%
! ATTAATTGCAGCTTGATGAT+TGG - chr4_1:71229889-71229908 Msa0569380:CDS 30.0%
! TTAATTGCAGCTTGATGATT+GGG - chr4_1:71229890-71229909 Msa0569380:CDS 30.0%
TGTCGAATTTACAACAAGAA+AGG - chr4_1:71229918-71229937 Msa0569380:CDS 30.0%
GTCGAATTTACAACAAGAAA+GGG - chr4_1:71229919-71229938 Msa0569380:CDS 30.0%
CAATACAAATTCATTCCACT+TGG + chr4_1:71230165-71230184 None:intergenic 30.0%
CAAGTGGAATGAATTTGTAT+TGG - chr4_1:71230163-71230182 Msa0569380:CDS 30.0%
! AACCCGAAAATTGATTCATT+TGG + chr4_1:71230274-71230293 None:intergenic 30.0%
!!! AAATGAATCAATTTTCGGGT+TGG - chr4_1:71230273-71230292 Msa0569380:CDS 30.0%
CAAATTAAATTTACTTGGGC+AGG + chr4_1:71230316-71230335 None:intergenic 30.0%
!!! GTCCCATGGATTTTTTAAAT+TGG - chr4_1:71230428-71230447 Msa0569380:intron 30.0%
AGTTGCAGTTAGTATTTGTT+TGG + chr4_1:71230486-71230505 None:intergenic 30.0%
!! TTACTAGGGTTTGTTGAATT+TGG - chr4_1:71230551-71230570 Msa0569380:CDS 30.0%
!! TACTAGGGTTTGTTGAATTT+GGG - chr4_1:71230552-71230571 Msa0569380:CDS 30.0%
ATCCAATTAGGCATGTTATT+AGG - chr4_1:71230681-71230700 Msa0569380:CDS 30.0%
TCCAATTAGGCATGTTATTA+GGG - chr4_1:71230682-71230701 Msa0569380:CDS 30.0%
! AGTGTTACTGTTAACATGTA+AGG - chr4_1:71230718-71230737 Msa0569380:CDS 30.0%
!!! GGAAGAAGTTGTGGTTTTAT+AGG + chr4_1:71229080-71229099 None:intergenic 35.0%
TTCTTCTTCTTCTTCAGTGT+TGG + chr4_1:71229167-71229186 None:intergenic 35.0%
ATTGAATATACGCGAATGCA+AGG - chr4_1:71229227-71229246 Msa0569380:three_prime_UTR 35.0%
!!! AGTGGTATTTTTTCTCTCCA+AGG - chr4_1:71229515-71229534 Msa0569380:exon 35.0%
!!! GTGGTATTTTTTCTCTCCAA+GGG - chr4_1:71229516-71229535 Msa0569380:exon 35.0%
TTTGGATATTTACGATCCCT+TGG + chr4_1:71229535-71229554 None:intergenic 35.0%
AGGGATCGTAAATATCCAAA+CGG - chr4_1:71229535-71229554 Msa0569380:CDS 35.0%
GTAAATATCCAAACGGTTCA+AGG - chr4_1:71229542-71229561 Msa0569380:CDS 35.0%
! TAAACCACCAATGTTTTCTG+AGG - chr4_1:71229965-71229984 Msa0569380:intron 35.0%
AAACCTCAGATCAAGATGAA+CGG - chr4_1:71230011-71230030 Msa0569380:intron 35.0%
CACTATTCCTAAAATCATCC+TGG + chr4_1:71230037-71230056 None:intergenic 35.0%
GAAAATCAAAGGCTGAAACT+GGG + chr4_1:71230196-71230215 None:intergenic 35.0%
TGAAAATCAAAGGCTGAAAC+TGG + chr4_1:71230197-71230216 None:intergenic 35.0%
CAGTTGAATCTTATGGATGA+TGG - chr4_1:71230215-71230234 Msa0569380:CDS 35.0%
AATAGAAATAGGTCATGGTC+TGG - chr4_1:71230350-71230369 Msa0569380:intron 35.0%
ATAGAAATAGGTCATGGTCT+GGG - chr4_1:71230351-71230370 Msa0569380:intron 35.0%
ATTGAAAATGACCATTTGGG+AGG - chr4_1:71230382-71230401 Msa0569380:intron 35.0%
AGGATTAGGGATCCTAAAAT+TGG - chr4_1:71230402-71230421 Msa0569380:intron 35.0%
ATTAGGGATCCTAAAATTGG+AGG - chr4_1:71230405-71230424 Msa0569380:intron 35.0%
TTAGGGATCCTAAAATTGGA+GGG - chr4_1:71230406-71230425 Msa0569380:intron 35.0%
GCAGTTAGTATTTGTTTGGT+AGG + chr4_1:71230482-71230501 None:intergenic 35.0%
AATGATCTCGATTCTCAACT+AGG - chr4_1:71230653-71230672 Msa0569380:CDS 35.0%
AACTAGGTGAAGATCCAATT+AGG - chr4_1:71230669-71230688 Msa0569380:CDS 35.0%
CCAATTAGGCATGTTATTAG+GGG - chr4_1:71230683-71230702 Msa0569380:CDS 35.0%
!!! GGAAGAAGTTGTGGTTTTAT+AGG + chr4_1:71229080-71229099 None:intergenic 35.0%
TTCTTCTTCTTCTTCAGTGT+TGG + chr4_1:71229167-71229186 None:intergenic 35.0%
ATTGAATATACGCGAATGCA+AGG - chr4_1:71229227-71229246 Msa0569380:three_prime_UTR 35.0%
!!! AGTGGTATTTTTTCTCTCCA+AGG - chr4_1:71229515-71229534 Msa0569380:exon 35.0%
!!! GTGGTATTTTTTCTCTCCAA+GGG - chr4_1:71229516-71229535 Msa0569380:exon 35.0%
TTTGGATATTTACGATCCCT+TGG + chr4_1:71229535-71229554 None:intergenic 35.0%
AGGGATCGTAAATATCCAAA+CGG - chr4_1:71229535-71229554 Msa0569380:CDS 35.0%
GTAAATATCCAAACGGTTCA+AGG - chr4_1:71229542-71229561 Msa0569380:CDS 35.0%
! TAAACCACCAATGTTTTCTG+AGG - chr4_1:71229965-71229984 Msa0569380:intron 35.0%
AAACCTCAGATCAAGATGAA+CGG - chr4_1:71230011-71230030 Msa0569380:intron 35.0%
CACTATTCCTAAAATCATCC+TGG + chr4_1:71230037-71230056 None:intergenic 35.0%
GAAAATCAAAGGCTGAAACT+GGG + chr4_1:71230196-71230215 None:intergenic 35.0%
TGAAAATCAAAGGCTGAAAC+TGG + chr4_1:71230197-71230216 None:intergenic 35.0%
CAGTTGAATCTTATGGATGA+TGG - chr4_1:71230215-71230234 Msa0569380:CDS 35.0%
AATAGAAATAGGTCATGGTC+TGG - chr4_1:71230350-71230369 Msa0569380:intron 35.0%
ATAGAAATAGGTCATGGTCT+GGG - chr4_1:71230351-71230370 Msa0569380:intron 35.0%
ATTGAAAATGACCATTTGGG+AGG - chr4_1:71230382-71230401 Msa0569380:intron 35.0%
AGGATTAGGGATCCTAAAAT+TGG - chr4_1:71230402-71230421 Msa0569380:intron 35.0%
ATTAGGGATCCTAAAATTGG+AGG - chr4_1:71230405-71230424 Msa0569380:intron 35.0%
TTAGGGATCCTAAAATTGGA+GGG - chr4_1:71230406-71230425 Msa0569380:intron 35.0%
GCAGTTAGTATTTGTTTGGT+AGG + chr4_1:71230482-71230501 None:intergenic 35.0%
AATGATCTCGATTCTCAACT+AGG - chr4_1:71230653-71230672 Msa0569380:CDS 35.0%
AACTAGGTGAAGATCCAATT+AGG - chr4_1:71230669-71230688 Msa0569380:CDS 35.0%
CCAATTAGGCATGTTATTAG+GGG - chr4_1:71230683-71230702 Msa0569380:CDS 35.0%
!!! GTTGTGGTTTTATAGGGGAT+AGG + chr4_1:71229073-71229092 None:intergenic 40.0%
TGTGAGAAAGGAAGAAGTTG+TGG + chr4_1:71229089-71229108 None:intergenic 40.0%
TGAGTTCGAAGTTGTGAGAA+AGG + chr4_1:71229101-71229120 None:intergenic 40.0%
!! TCTTCTTCTTCAGTGTTGGT+TGG + chr4_1:71229163-71229182 None:intergenic 40.0%
TTGACAAGCTCATCATCAGT+CGG + chr4_1:71229287-71229306 None:intergenic 40.0%
AATAGGAACAGCTATAGGGA+GGG + chr4_1:71229336-71229355 None:intergenic 40.0%
TAATAGGAACAGCTATAGGG+AGG + chr4_1:71229337-71229356 None:intergenic 40.0%
TTCTTTATCCCAAGTGCCTT+CGG + chr4_1:71229631-71229650 None:intergenic 40.0%
!! AAAGCACTCGTTTTCTATGC+TGG - chr4_1:71229649-71229668 Msa0569380:CDS 40.0%
ATACTCGTGCATGATCCAAT+TGG + chr4_1:71229698-71229717 None:intergenic 40.0%
TGAGCTTCCTCAGAAAACAT+TGG + chr4_1:71229975-71229994 None:intergenic 40.0%
GTACACTGACACATCAGATT+CGG - chr4_1:71230064-71230083 Msa0569380:intron 40.0%
CTTTGAACTTCCTTATCGCA+CGG + chr4_1:71230137-71230156 None:intergenic 40.0%
!! TCATTTGGTACTGATCCTGA+GGG + chr4_1:71230259-71230278 None:intergenic 40.0%
!! TTCATTTGGTACTGATCCTG+AGG + chr4_1:71230260-71230279 None:intergenic 40.0%
TAGAAATAGGTCATGGTCTG+GGG - chr4_1:71230352-71230371 Msa0569380:intron 40.0%
AATGACCATTTGGGAGGATT+AGG - chr4_1:71230388-71230407 Msa0569380:intron 40.0%
ATGACCATTTGGGAGGATTA+GGG - chr4_1:71230389-71230408 Msa0569380:intron 40.0%
ATACTAACTGCAACTGCAAG+TGG - chr4_1:71230491-71230510 Msa0569380:CDS 40.0%
TAATGGTGCATGTCTGATCT+TGG - chr4_1:71230520-71230539 Msa0569380:CDS 40.0%
AATGGTGCATGTCTGATCTT+GGG - chr4_1:71230521-71230540 Msa0569380:CDS 40.0%
ATCTTGGGTAGGTGATTACT+AGG - chr4_1:71230536-71230555 Msa0569380:CDS 40.0%
TCTTGGGTAGGTGATTACTA+GGG - chr4_1:71230537-71230556 Msa0569380:CDS 40.0%
CCCCTAATAACATGCCTAAT+TGG + chr4_1:71230686-71230705 None:intergenic 40.0%
! GGCATGTTATTAGGGGTATA+TGG - chr4_1:71230690-71230709 Msa0569380:CDS 40.0%
!!! GTTGTGGTTTTATAGGGGAT+AGG + chr4_1:71229073-71229092 None:intergenic 40.0%
TGTGAGAAAGGAAGAAGTTG+TGG + chr4_1:71229089-71229108 None:intergenic 40.0%
TGAGTTCGAAGTTGTGAGAA+AGG + chr4_1:71229101-71229120 None:intergenic 40.0%
!! TCTTCTTCTTCAGTGTTGGT+TGG + chr4_1:71229163-71229182 None:intergenic 40.0%
TTGACAAGCTCATCATCAGT+CGG + chr4_1:71229287-71229306 None:intergenic 40.0%
AATAGGAACAGCTATAGGGA+GGG + chr4_1:71229336-71229355 None:intergenic 40.0%
TAATAGGAACAGCTATAGGG+AGG + chr4_1:71229337-71229356 None:intergenic 40.0%
TTCTTTATCCCAAGTGCCTT+CGG + chr4_1:71229631-71229650 None:intergenic 40.0%
!! AAAGCACTCGTTTTCTATGC+TGG - chr4_1:71229649-71229668 Msa0569380:CDS 40.0%
ATACTCGTGCATGATCCAAT+TGG + chr4_1:71229698-71229717 None:intergenic 40.0%
TGAGCTTCCTCAGAAAACAT+TGG + chr4_1:71229975-71229994 None:intergenic 40.0%
GTACACTGACACATCAGATT+CGG - chr4_1:71230064-71230083 Msa0569380:intron 40.0%
CTTTGAACTTCCTTATCGCA+CGG + chr4_1:71230137-71230156 None:intergenic 40.0%
!! TCATTTGGTACTGATCCTGA+GGG + chr4_1:71230259-71230278 None:intergenic 40.0%
!! TTCATTTGGTACTGATCCTG+AGG + chr4_1:71230260-71230279 None:intergenic 40.0%
TAGAAATAGGTCATGGTCTG+GGG - chr4_1:71230352-71230371 Msa0569380:intron 40.0%
AATGACCATTTGGGAGGATT+AGG - chr4_1:71230388-71230407 Msa0569380:intron 40.0%
ATGACCATTTGGGAGGATTA+GGG - chr4_1:71230389-71230408 Msa0569380:intron 40.0%
ATACTAACTGCAACTGCAAG+TGG - chr4_1:71230491-71230510 Msa0569380:CDS 40.0%
TAATGGTGCATGTCTGATCT+TGG - chr4_1:71230520-71230539 Msa0569380:CDS 40.0%
AATGGTGCATGTCTGATCTT+GGG - chr4_1:71230521-71230540 Msa0569380:CDS 40.0%
ATCTTGGGTAGGTGATTACT+AGG - chr4_1:71230536-71230555 Msa0569380:CDS 40.0%
TCTTGGGTAGGTGATTACTA+GGG - chr4_1:71230537-71230556 Msa0569380:CDS 40.0%
CCCCTAATAACATGCCTAAT+TGG + chr4_1:71230686-71230705 None:intergenic 40.0%
! GGCATGTTATTAGGGGTATA+TGG - chr4_1:71230690-71230709 Msa0569380:CDS 40.0%
GCTGCTAGGGTAGTTAGTAT+TGG + chr4_1:71229138-71229157 None:intergenic 45.0%
!! TCTTCTTCAGTGTTGGTTGG+TGG + chr4_1:71229160-71229179 None:intergenic 45.0%
! GGAGCATTAGAATTACCACC+TGG - chr4_1:71229248-71229267 Msa0569380:three_prime_UTR 45.0%
TGACAAGCTCATCATCAGTC+GGG + chr4_1:71229286-71229305 None:intergenic 45.0%
TTTGATCCATGGCATCTTCC+AGG - chr4_1:71229380-71229399 Msa0569380:three_prime_UTR 45.0%
TAAGTACCTGGAAGATGCCA+TGG + chr4_1:71229389-71229408 None:intergenic 45.0%
CTCTTTACGGTGAGAAAGAG+TGG - chr4_1:71229497-71229516 Msa0569380:three_prime_UTR 45.0%
GCTTCCTCAGAAAACATTGG+TGG + chr4_1:71229972-71229991 None:intergenic 45.0%
! TGAACGGCCAGGATGATTTT+AGG - chr4_1:71230027-71230046 Msa0569380:intron 45.0%
AAGTTCAAAGTGAGCCCAAG+TGG - chr4_1:71230147-71230166 Msa0569380:CDS 45.0%
!! CATTTGGTACTGATCCTGAG+GGG + chr4_1:71230258-71230277 None:intergenic 45.0%
ACTGCAAGTGGAGCTTCTAA+TGG - chr4_1:71230503-71230522 Msa0569380:CDS 45.0%
GCTGCTAGGGTAGTTAGTAT+TGG + chr4_1:71229138-71229157 None:intergenic 45.0%
!! TCTTCTTCAGTGTTGGTTGG+TGG + chr4_1:71229160-71229179 None:intergenic 45.0%
! GGAGCATTAGAATTACCACC+TGG - chr4_1:71229248-71229267 Msa0569380:three_prime_UTR 45.0%
TGACAAGCTCATCATCAGTC+GGG + chr4_1:71229286-71229305 None:intergenic 45.0%
TTTGATCCATGGCATCTTCC+AGG - chr4_1:71229380-71229399 Msa0569380:three_prime_UTR 45.0%
TAAGTACCTGGAAGATGCCA+TGG + chr4_1:71229389-71229408 None:intergenic 45.0%
CTCTTTACGGTGAGAAAGAG+TGG - chr4_1:71229497-71229516 Msa0569380:three_prime_UTR 45.0%
GCTTCCTCAGAAAACATTGG+TGG + chr4_1:71229972-71229991 None:intergenic 45.0%
! TGAACGGCCAGGATGATTTT+AGG - chr4_1:71230027-71230046 Msa0569380:intron 45.0%
AAGTTCAAAGTGAGCCCAAG+TGG - chr4_1:71230147-71230166 Msa0569380:CDS 45.0%
!! CATTTGGTACTGATCCTGAG+GGG + chr4_1:71230258-71230277 None:intergenic 45.0%
ACTGCAAGTGGAGCTTCTAA+TGG - chr4_1:71230503-71230522 Msa0569380:CDS 45.0%
!! AAAATAAAATAAAATTGATT+TGG + chr4_1:71229786-71229805 None:intergenic 5.0%
!! AAAATAAAATAAAATTGATT+TGG + chr4_1:71229786-71229805 None:intergenic 5.0%
! TCCAATCGGCTTATCAGCTC+CGG + chr4_1:71229605-71229624 None:intergenic 50.0%
TAAGCCGATTGGAAAGCCGA+AGG - chr4_1:71229612-71229631 Msa0569380:CDS 50.0%
AGTGCCTTCGGCTTTCCAAT+CGG + chr4_1:71229619-71229638 None:intergenic 50.0%
!! ATTGGAAAGCCGAAGGCACT+TGG - chr4_1:71229619-71229638 Msa0569380:CDS 50.0%
!! TTGGAAAGCCGAAGGCACTT+GGG - chr4_1:71229620-71229639 Msa0569380:CDS 50.0%
TATGCTGGCAAAGCTCCCAA+AGG - chr4_1:71229664-71229683 Msa0569380:CDS 50.0%
TGGCCGTTCATCTTGATCTG+AGG + chr4_1:71230017-71230036 None:intergenic 50.0%
TCAGATCAAGATGAACGGCC+AGG - chr4_1:71230016-71230035 Msa0569380:intron 50.0%
!! ACACATCAGATTCGGTGCCA+CGG - chr4_1:71230072-71230091 Msa0569380:intron 50.0%
CAAAGGCTGAAACTGGGTCT+GGG + chr4_1:71230190-71230209 None:intergenic 50.0%
TCAAAGGCTGAAACTGGGTC+TGG + chr4_1:71230191-71230210 None:intergenic 50.0%
ACTGATCCTGAGGGGCAAAA+GGG + chr4_1:71230250-71230269 None:intergenic 50.0%
TACTGATCCTGAGGGGCAAA+AGG + chr4_1:71230251-71230270 None:intergenic 50.0%
GGATCCCTAATCCTCCCAAA+TGG + chr4_1:71230396-71230415 None:intergenic 50.0%
! CCATGGGACCCTCCAATTTT+AGG + chr4_1:71230417-71230436 None:intergenic 50.0%
CCTAAAATTGGAGGGTCCCA+TGG - chr4_1:71230414-71230433 Msa0569380:intron 50.0%
GTGCATGTCTGATCTTGGGT+AGG - chr4_1:71230525-71230544 Msa0569380:CDS 50.0%
! TCCAATCGGCTTATCAGCTC+CGG + chr4_1:71229605-71229624 None:intergenic 50.0%
TAAGCCGATTGGAAAGCCGA+AGG - chr4_1:71229612-71229631 Msa0569380:CDS 50.0%
AGTGCCTTCGGCTTTCCAAT+CGG + chr4_1:71229619-71229638 None:intergenic 50.0%
!! ATTGGAAAGCCGAAGGCACT+TGG - chr4_1:71229619-71229638 Msa0569380:CDS 50.0%
!! TTGGAAAGCCGAAGGCACTT+GGG - chr4_1:71229620-71229639 Msa0569380:CDS 50.0%
TATGCTGGCAAAGCTCCCAA+AGG - chr4_1:71229664-71229683 Msa0569380:CDS 50.0%
TGGCCGTTCATCTTGATCTG+AGG + chr4_1:71230017-71230036 None:intergenic 50.0%
TCAGATCAAGATGAACGGCC+AGG - chr4_1:71230016-71230035 Msa0569380:intron 50.0%
!! ACACATCAGATTCGGTGCCA+CGG - chr4_1:71230072-71230091 Msa0569380:intron 50.0%
CAAAGGCTGAAACTGGGTCT+GGG + chr4_1:71230190-71230209 None:intergenic 50.0%
TCAAAGGCTGAAACTGGGTC+TGG + chr4_1:71230191-71230210 None:intergenic 50.0%
ACTGATCCTGAGGGGCAAAA+GGG + chr4_1:71230250-71230269 None:intergenic 50.0%
TACTGATCCTGAGGGGCAAA+AGG + chr4_1:71230251-71230270 None:intergenic 50.0%
GGATCCCTAATCCTCCCAAA+TGG + chr4_1:71230396-71230415 None:intergenic 50.0%
! CCATGGGACCCTCCAATTTT+AGG + chr4_1:71230417-71230436 None:intergenic 50.0%
CCTAAAATTGGAGGGTCCCA+TGG - chr4_1:71230414-71230433 Msa0569380:intron 50.0%
GTGCATGTCTGATCTTGGGT+AGG - chr4_1:71230525-71230544 Msa0569380:CDS 50.0%
!! GTGTTGGTTGGTGGCTGCTA+GGG + chr4_1:71229151-71229170 None:intergenic 55.0%
!! AGTGTTGGTTGGTGGCTGCT+AGG + chr4_1:71229152-71229171 None:intergenic 55.0%
! GGGTGAAATCTGAAGCCAGG+TGG + chr4_1:71229266-71229285 None:intergenic 55.0%
! GTCGGGTGAAATCTGAAGCC+AGG + chr4_1:71229269-71229288 None:intergenic 55.0%
CAAACGGTTCAAGGCCGAAC+CGG - chr4_1:71229551-71229570 Msa0569380:CDS 55.0%
AAACGGTTCAAGGCCGAACC+GGG - chr4_1:71229552-71229571 Msa0569380:CDS 55.0%
TGCGGGAACCGGATATTGGA+AGG - chr4_1:71229576-71229595 Msa0569380:CDS 55.0%
ACCGGATATTGGAAGGCGAC+CGG - chr4_1:71229583-71229602 Msa0569380:CDS 55.0%
TCCGGTCGCCTTCCAATATC+CGG + chr4_1:71229587-71229606 None:intergenic 55.0%
ACCGGAGCTGATAAGCCGAT+TGG - chr4_1:71229601-71229620 Msa0569380:CDS 55.0%
CTTGAGTCGGTGTGAAACCG+TGG + chr4_1:71230092-71230111 None:intergenic 55.0%
!! CGGTTTCACACCGACTCAAG+CGG - chr4_1:71230092-71230111 Msa0569380:CDS 55.0%
GTGCTCAGAACCGCTTGAGT+CGG + chr4_1:71230105-71230124 None:intergenic 55.0%
CGTGGTTTCACCGTGCGATA+AGG - chr4_1:71230124-71230143 Msa0569380:CDS 55.0%
! AGATGACCCTTTTGCCCCTC+AGG - chr4_1:71230241-71230260 Msa0569380:CDS 55.0%
!! GTGTTGGTTGGTGGCTGCTA+GGG + chr4_1:71229151-71229170 None:intergenic 55.0%
!! AGTGTTGGTTGGTGGCTGCT+AGG + chr4_1:71229152-71229171 None:intergenic 55.0%
! GGGTGAAATCTGAAGCCAGG+TGG + chr4_1:71229266-71229285 None:intergenic 55.0%
! GTCGGGTGAAATCTGAAGCC+AGG + chr4_1:71229269-71229288 None:intergenic 55.0%
CAAACGGTTCAAGGCCGAAC+CGG - chr4_1:71229551-71229570 Msa0569380:CDS 55.0%
AAACGGTTCAAGGCCGAACC+GGG - chr4_1:71229552-71229571 Msa0569380:CDS 55.0%
TGCGGGAACCGGATATTGGA+AGG - chr4_1:71229576-71229595 Msa0569380:CDS 55.0%
ACCGGATATTGGAAGGCGAC+CGG - chr4_1:71229583-71229602 Msa0569380:CDS 55.0%
TCCGGTCGCCTTCCAATATC+CGG + chr4_1:71229587-71229606 None:intergenic 55.0%
ACCGGAGCTGATAAGCCGAT+TGG - chr4_1:71229601-71229620 Msa0569380:CDS 55.0%
CTTGAGTCGGTGTGAAACCG+TGG + chr4_1:71230092-71230111 None:intergenic 55.0%
!! CGGTTTCACACCGACTCAAG+CGG - chr4_1:71230092-71230111 Msa0569380:CDS 55.0%
GTGCTCAGAACCGCTTGAGT+CGG + chr4_1:71230105-71230124 None:intergenic 55.0%
CGTGGTTTCACCGTGCGATA+AGG - chr4_1:71230124-71230143 Msa0569380:CDS 55.0%
! AGATGACCCTTTTGCCCCTC+AGG - chr4_1:71230241-71230260 Msa0569380:CDS 55.0%
! CGGTTCGGCCTTGAACCGTT+TGG + chr4_1:71229553-71229572 None:intergenic 60.0%
AATATCCGGTTCCCGCAGCC+CGG + chr4_1:71229573-71229592 None:intergenic 60.0%
!! CTCAAGCGGTTCTGAGCACG+TGG - chr4_1:71230106-71230125 Msa0569380:CDS 60.0%
! CGGTTCGGCCTTGAACCGTT+TGG + chr4_1:71229553-71229572 None:intergenic 60.0%
AATATCCGGTTCCCGCAGCC+CGG + chr4_1:71229573-71229592 None:intergenic 60.0%
!! CTCAAGCGGTTCTGAGCACG+TGG - chr4_1:71230106-71230125 Msa0569380:CDS 60.0%
TTCAAGGCCGAACCGGGCTG+CGG - chr4_1:71229558-71229577 Msa0569380:CDS 65.0%
GGGCTGCGGGAACCGGATAT+TGG - chr4_1:71229572-71229591 Msa0569380:CDS 65.0%
TTCAAGGCCGAACCGGGCTG+CGG - chr4_1:71229558-71229577 Msa0569380:CDS 65.0%
GGGCTGCGGGAACCGGATAT+TGG - chr4_1:71229572-71229591 Msa0569380:CDS 65.0%
TCAAGGCCGAACCGGGCTGC+GGG - chr4_1:71229559-71229578 Msa0569380:CDS 70.0%
TCAAGGCCGAACCGGGCTGC+GGG - chr4_1:71229559-71229578 Msa0569380:CDS 70.0%
CCGGTTCCCGCAGCCCGGTT+CGG + chr4_1:71229568-71229587 None:intergenic 75.0%
CCGAACCGGGCTGCGGGAAC+CGG - chr4_1:71229565-71229584 Msa0569380:CDS 75.0%
CCGGTTCCCGCAGCCCGGTT+CGG + chr4_1:71229568-71229587 None:intergenic 75.0%
CCGAACCGGGCTGCGGGAAC+CGG - chr4_1:71229565-71229584 Msa0569380:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 71229068 71230791 71229068 ID=Msa0569380;Name=Msa0569380
chr4_1 mRNA 71229068 71230791 71229068 ID=Msa0569380-mRNA-1;Parent=Msa0569380;Name=Msa0569380-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|1|1|1|1|3|466|345
chr4_1 exon 71229068 71229959 71229068 ID=Msa0569380-mRNA-1:exon:24152;Parent=Msa0569380-mRNA-1
chr4_1 exon 71230091 71230368 71230091 ID=Msa0569380-mRNA-1:exon:24151;Parent=Msa0569380-mRNA-1
chr4_1 exon 71230458 71230791 71230458 ID=Msa0569380-mRNA-1:exon:24150;Parent=Msa0569380-mRNA-1
chr4_1 CDS 71230458 71230791 71230458 ID=Msa0569380-mRNA-1:cds;Parent=Msa0569380-mRNA-1
chr4_1 CDS 71230091 71230368 71230091 ID=Msa0569380-mRNA-1:cds;Parent=Msa0569380-mRNA-1
chr4_1 CDS 71229534 71229959 71229534 ID=Msa0569380-mRNA-1:cds;Parent=Msa0569380-mRNA-1
chr4_1 three_prime_UTR 71229068 71229533 71229068 ID=Msa0569380-mRNA-1:three_prime_utr;Parent=Msa0569380-mRNA-1
Gene Sequence

>Msa0569380

CTCCTATCCCCTATAAAACCACAACTTCTTCCTTTCTCACAACTTCGAACTCACTTCAATATCATATCCAATACTAACTACCCTAGCAGCCACCAACCAACACTGAAGAAGAAGAAGAAGAAGAAAAAGAACAATAGTACGTATAGTATCAAGAAATTAATTGAATATACGCGAATGCAAGGAGCATTAGAATTACCACCTGGCTTCAGATTTCACCCGACTGATGATGAGCTTGTCAATCACTACTTGTGTAGAAAGTGTGCTTCCCTCCCTATAGCTGTTCCTATTATCAAAGAAATTGATTTGTATAAGTTTGATCCATGGCATCTTCCAGAAATGGCTCTTTACGGTGAGAAAGAGTGGTATTTTTTCTCTCCAAGGGATCGTAAATATCCAAACGGTTCAAGGCCGAACCGGGCTGCGGGAACCGGATATTGGAAGGCGACCGGAGCTGATAAGCCGATTGGAAAGCCGAAGGCACTTGGGATAAAGAAAGCACTCGTTTTCTATGCTGGCAAAGCTCCCAAAGGAATTAAAACCAATTGGATCATGCACGAGTATCGTCTTGCTAATGTTGATAGATCCGCTTCCAAAAATAACCACAATTTAAGACTTGATGATTGGGTCTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAATGACACTAAACCACCAATGTTTTCTGAGGAAGCTCAATTTGAGAATGAGACAAAACCTCAGATCAAGATGAACGGCCAGGATGATTTTAGGAATAGTGATCAATTGTACACTGACACATCAGATTCGGTGCCACGGTTTCACACCGACTCAAGCGGTTCTGAGCACGTGGTTTCACCGTGCGATAAGGAAGTTCAAAGTGAGCCCAAGTGGAATGAATTTGTATTGGGCCCAGACCCAGTTTCAGCCTTTGATTTTCAGTTGAATCTTATGGATGATGGTGAAGATGACCCTTTTGCCCCTCAGGATCAGTACCAAATGAATCAATTTTCGGGTTGGCAAGATGTGTTTATGTACCTGCCCAAGTAA
Protein sequence

>Msa0569380

LLSPIKPQLLPFSQLRTHFNIISNTNYPSSHQPTLKKKKKKKKNNSTYSIKKLIEYTRMQGALELPPGFRFHPTDDELVNHYLCRKCASLPIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASKNNHNLRLDDWVLCRIYNKKGKIEKYNDTKPPMFSEEAQFENETKPQIKMNGQDDFRNSDQLYTDTSDSVPRFHTDSSGSEHVVSPCDKEVQSEPKWNEFVLGPDPVSAFDFQLNLMDDGEDDPFAPQDQYQMNQFSGWQDVFMYLPK*