AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1439050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1439050 MtrunA17_Chr8g0384721 91.809 293 10 5 1 287 1 285 0.0 540
Msa1439050 MtrunA17_Chr3g0130731 68.350 297 71 7 1 284 1 287 7.34e-135 383
Msa1439050 MtrunA17_Chr3g0124761 62.752 298 88 7 1 287 1 286 2.05e-120 346
Msa1439050 MtrunA17_Chr2g0318081 67.702 161 47 2 5 164 14 170 2.72e-75 234
Msa1439050 MtrunA17_Chr2g0318101 67.683 164 39 3 7 158 15 176 3.34e-75 233
Msa1439050 MtrunA17_Chr7g0252971 55.072 207 77 3 7 198 8 213 1.87e-74 231
Msa1439050 MtrunA17_Chr8g0359921 65.896 173 52 3 5 176 12 178 3.79e-73 227
Msa1439050 MtrunA17_Chr5g0417791 45.196 281 117 8 5 278 1 251 7.57e-73 224
Msa1439050 MtrunA17_Chr4g0042561 63.871 155 55 1 6 159 8 162 8.04e-72 222
Msa1439050 MtrunA17_Chr4g0047841 64.000 175 41 3 6 158 14 188 1.23e-71 224
Msa1439050 MtrunA17_Chr2g0326361 54.545 187 72 2 7 190 14 190 3.85e-70 219
Msa1439050 MtrunA17_Chr7g0263931 55.738 183 77 2 5 183 9 191 6.23e-70 219
Msa1439050 MtrunA17_Chr2g0309891 38.170 317 155 9 5 284 4 316 3.92e-59 192
Msa1439050 MtrunA17_Chr5g0417001 40.928 237 119 6 7 225 14 247 3.47e-57 188
Msa1439050 MtrunA17_Chr8g0361731 53.165 158 66 3 9 158 16 173 1.32e-55 184
Msa1439050 MtrunA17_Chr6g0453131 50.292 171 66 3 6 163 14 178 8.82e-55 182
Msa1439050 MtrunA17_Chr6g0453451 54.777 157 68 2 5 160 18 172 4.43e-54 178
Msa1439050 MtrunA17_Chr4g0060931 53.659 164 67 3 5 164 15 173 1.19e-53 178
Msa1439050 MtrunA17_Chr6g0484441 52.121 165 68 3 7 168 5 161 1.28e-53 177
Msa1439050 MtrunA17_Chr6g0481091 52.866 157 67 4 7 160 6 158 1.52e-53 174
Msa1439050 MtrunA17_Chr4g0018391 46.703 182 85 4 1 176 1 176 1.27e-52 175
Msa1439050 MtrunA17_Chr3g0139331 52.469 162 68 2 7 165 11 166 1.87e-52 174
Msa1439050 MtrunA17_Chr8g0372121 49.689 161 71 3 7 163 6 160 5.25e-52 172
Msa1439050 MtrunA17_Chr5g0442771 51.205 166 72 3 9 165 20 185 6.50e-52 172
Msa1439050 MtrunA17_Chr3g0091921 54.194 155 68 2 5 158 14 166 1.00e-51 171
Msa1439050 MtrunA17_Chr7g0253011 51.205 166 74 2 4 164 14 177 1.40e-51 173
Msa1439050 MtrunA17_Chr5g0433781 53.416 161 68 4 5 162 4 160 1.46e-51 179
Msa1439050 MtrunA17_Chr3g0109821 54.037 161 68 3 5 162 4 161 1.56e-51 179
Msa1439050 MtrunA17_Chr4g0076731 53.247 154 64 2 9 160 56 203 2.71e-51 174
Msa1439050 MtrunA17_Chr1g0147421 48.889 180 78 4 1 172 17 190 3.22e-51 172
Msa1439050 MtrunA17_Chr2g0316971 54.140 157 63 3 7 158 23 175 6.75e-51 171
Msa1439050 MtrunA17_Chr5g0400461 48.588 177 71 4 3 169 2 168 9.23e-51 170
Msa1439050 MtrunA17_Chr5g0398971 48.780 164 74 3 1 159 1 159 9.60e-51 170
Msa1439050 MtrunA17_Chr4g0056541 47.093 172 80 4 1 167 1 166 1.88e-50 170
Msa1439050 MtrunA17_Chr7g0214071 55.280 161 58 5 3 159 11 161 2.22e-50 166
Msa1439050 MtrunA17_Chr2g0309331 48.256 172 76 4 1 165 2 167 3.05e-50 169
Msa1439050 MtrunA17_Chr7g0217721 48.045 179 77 4 5 169 17 193 6.89e-50 168
Msa1439050 MtrunA17_Chr5g0405211 50.955 157 67 3 7 159 8 158 8.09e-50 168
Msa1439050 MtrunA17_Chr1g0183741 51.250 160 66 3 7 163 10 160 1.13e-49 165
Msa1439050 MtrunA17_Chr2g0311651 41.284 218 112 6 9 213 24 238 3.32e-49 165
Msa1439050 MtrunA17_Chr4g0017921 50.318 157 67 3 7 159 8 157 1.34e-48 165
Msa1439050 MtrunA17_Chr1g0200561 42.328 189 93 4 7 185 19 201 3.49e-48 164
Msa1439050 MtrunA17_Chr2g0311661 41.778 225 103 7 9 214 23 238 4.41e-48 162
Msa1439050 MtrunA17_Chr6g0461661 51.592 157 71 2 5 158 16 170 4.66e-48 164
Msa1439050 MtrunA17_Chr7g0261411 47.253 182 83 3 7 185 10 181 1.53e-47 160
Msa1439050 MtrunA17_Chr7g0217711 51.634 153 67 3 5 152 17 167 2.17e-47 156
Msa1439050 MtrunA17_Chr8g0385991 45.977 174 88 3 2 171 9 180 2.36e-46 155
Msa1439050 MtrunA17_Chr4g0054791 48.824 170 76 5 1 164 1 165 2.39e-46 158
Msa1439050 MtrunA17_Chr2g0312321 42.453 212 103 6 6 212 10 207 7.39e-46 156
Msa1439050 MtrunA17_Chr8g0346001 43.605 172 88 3 1 163 9 180 1.70e-45 159
Msa1439050 MtrunA17_Chr5g0428991 51.572 159 66 4 6 159 24 176 5.92e-45 160
Msa1439050 MtrunA17_Chr3g0144271 52.597 154 66 4 7 156 23 173 2.19e-44 155
Msa1439050 MtrunA17_Chr3g0131911 48.780 164 75 3 3 159 10 171 7.71e-44 149
Msa1439050 MtrunA17_Chr3g0130101 45.860 157 78 3 7 160 7 159 2.42e-43 151
Msa1439050 MtrunA17_Chr3g0128151 49.682 157 68 4 7 158 22 172 1.06e-42 154
Msa1439050 MtrunA17_Chr1g0201021 45.029 171 87 4 9 176 21 187 6.85e-42 151
Msa1439050 MtrunA17_Chr3g0092671 44.624 186 93 6 4 185 2 181 1.82e-41 150
Msa1439050 MtrunA17_Chr1g0197361 44.186 172 87 5 9 176 10 176 3.90e-41 149
Msa1439050 MtrunA17_Chr8g0364791 43.038 158 83 3 6 160 5 158 1.79e-40 145
Msa1439050 MtrunA17_Chr3g0128111 45.455 154 73 4 10 158 45 192 5.42e-40 139
Msa1439050 MtrunA17_Chr4g0038751 44.654 159 75 4 9 163 17 166 9.49e-40 140
Msa1439050 MtrunA17_Chr1g0197351 47.134 157 78 3 7 158 42 198 2.88e-39 143
Msa1439050 MtrunA17_Chr8g0345671 46.795 156 67 6 6 155 10 155 1.34e-37 137
Msa1439050 MtrunA17_Chr8g0384201 41.139 158 86 3 6 160 5 158 2.24e-37 138
Msa1439050 MtrunA17_Chr4g0026141 40.719 167 91 4 7 166 5 170 4.13e-36 130
Msa1439050 MtrunA17_Chr7g0266701 31.602 231 137 7 7 225 4 225 8.68e-35 126
Msa1439050 MtrunA17_Chr4g0050701 41.401 157 79 3 7 158 11 159 2.41e-34 123
Msa1439050 MtrunA17_Chr2g0321631 34.694 245 136 8 8 236 5 241 3.92e-34 124
Msa1439050 MtrunA17_Chr3g0113001 52.033 123 57 2 52 173 10 131 2.36e-33 123
Msa1439050 MtrunA17_Chr8g0345691 39.623 159 72 6 7 155 12 156 1.09e-31 121
Msa1439050 MtrunA17_Chr2g0321741 45.528 123 54 4 35 155 20 131 8.68e-31 118
Msa1439050 MtrunA17_Chr8g0384351 42.073 164 70 6 2 164 5 144 1.49e-30 113
Msa1439050 MtrunA17_Chr8g0345711 38.750 160 84 6 7 153 12 170 1.18e-29 110
Msa1439050 MtrunA17_Chr8g0345731 42.748 131 67 4 7 129 24 154 2.19e-28 107
Msa1439050 MtrunA17_Chr3g0113031 50.459 109 45 3 70 173 3 107 6.79e-26 103
Msa1439050 MtrunA17_Chr8g0345721 36.196 163 68 5 10 137 38 199 8.13e-25 99.0
Msa1439050 MtrunA17_Chr3g0130321 32.727 165 96 5 1 156 1 159 2.98e-23 94.7
Msa1439050 MtrunA17_Chr8g0345701 37.584 149 70 6 1 129 1 146 3.62e-23 93.6
Msa1439050 MtrunA17_Chr7g0243371 54.667 75 31 1 60 131 17 91 2.70e-21 87.0
Msa1439050 MtrunA17_Chr8g0345741 37.097 124 59 4 38 156 23 132 5.52e-21 87.0
Msa1439050 MtrunA17_Chr7g0251661 30.882 136 87 4 3 134 6 138 8.16e-18 78.6
Msa1439050 MtrunA17_Chr7g0251651 31.387 137 87 4 2 134 13 146 1.02e-17 79.3
Msa1439050 MtrunA17_Chr7g0251671 29.323 133 87 4 6 134 9 138 7.66e-16 73.6
Msa1439050 MtrunA17_Chr7g0274971 32.558 172 97 8 13 174 11 173 3.40e-12 64.7
Msa1439050 MtrunA17_Chr8g0389661 32.468 154 75 7 5 132 45 195 3.80e-11 63.2
Msa1439050 MtrunA17_Chr4g0040541 30.345 145 82 5 7 133 48 191 5.09e-11 62.0
Msa1439050 MtrunA17_Chr8g0367761 29.861 144 83 5 7 133 68 210 5.88e-11 61.6
Msa1439050 MtrunA17_Chr4g0046431 29.861 144 83 5 7 133 68 210 6.47e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1439050 AT1G01720.1 62.069 290 104 5 1 287 1 287 1.40e-118 342
Msa1439050 AT5G08790.1 63.194 288 77 8 1 280 1 267 1.99e-116 336
Msa1439050 AT5G63790.1 60.135 296 71 9 1 286 44 302 1.27e-109 320
Msa1439050 AT5G63790.2 60.616 292 68 9 1 282 54 308 1.79e-109 320
Msa1439050 AT1G77450.1 59.770 261 60 7 5 262 8 226 2.98e-96 284
Msa1439050 AT1G69490.1 54.369 206 88 3 7 211 9 209 3.53e-76 233
Msa1439050 AT1G52890.1 67.702 161 47 2 5 164 12 168 2.29e-74 230
Msa1439050 AT3G15500.1 66.867 166 48 3 5 167 12 173 5.68e-74 229
Msa1439050 AT4G27410.2 64.162 173 57 2 5 176 12 180 1.37e-73 228
Msa1439050 AT1G61110.1 65.663 166 47 2 3 158 12 177 1.23e-71 224
Msa1439050 AT3G04070.2 65.217 161 47 2 7 158 10 170 3.83e-70 220
Msa1439050 AT3G04070.1 62.147 177 42 4 7 158 10 186 8.17e-70 220
Msa1439050 AT4G27410.3 58.421 190 57 3 5 176 12 197 3.62e-69 217
Msa1439050 AT3G15510.1 65.839 161 39 4 11 158 21 178 6.00e-67 213
Msa1439050 AT1G52880.1 65.409 159 42 3 11 158 21 177 1.74e-62 200
Msa1439050 AT5G61430.1 55.414 157 67 2 5 160 14 168 2.77e-56 184
Msa1439050 AT5G39610.1 53.846 169 70 3 5 172 18 179 3.51e-56 182
Msa1439050 AT5G07680.1 56.129 155 65 2 5 158 15 167 1.23e-55 182
Msa1439050 AT5G07680.2 56.129 155 65 2 5 158 1 153 1.44e-55 182
Msa1439050 AT1G26870.1 51.807 166 60 3 7 158 16 175 3.13e-55 184
Msa1439050 AT3G18400.1 53.459 159 68 2 7 164 5 158 3.21e-55 181
Msa1439050 AT5G39820.1 48.000 175 71 3 9 163 22 196 1.41e-54 180
Msa1439050 AT1G76420.1 54.777 157 63 4 7 160 22 173 2.76e-54 179
Msa1439050 AT5G62380.2 47.027 185 88 3 1 181 1 179 4.56e-54 179
Msa1439050 AT5G62380.1 47.027 185 88 3 1 181 1 179 4.56e-54 179
Msa1439050 AT2G33480.2 54.717 159 62 3 2 159 10 159 1.15e-53 176
Msa1439050 AT3G04060.1 51.445 173 74 3 2 169 15 182 1.27e-53 177
Msa1439050 AT2G33480.1 55.346 159 63 4 2 159 10 161 2.40e-53 175
Msa1439050 AT2G24430.2 52.469 162 69 3 7 165 16 172 5.61e-53 175
Msa1439050 AT2G24430.1 52.469 162 69 3 7 165 16 172 5.61e-53 175
Msa1439050 AT3G03200.1 53.503 157 67 3 5 158 4 157 6.37e-53 179
Msa1439050 AT3G17730.1 52.229 157 68 3 7 160 6 158 6.42e-53 173
Msa1439050 AT3G29035.1 47.208 197 91 4 5 198 22 208 8.33e-53 175
Msa1439050 AT5G17260.1 53.503 157 67 3 5 158 4 157 1.04e-51 176
Msa1439050 AT5G53950.1 53.416 161 58 3 7 158 17 169 2.88e-51 172
Msa1439050 AT2G43000.1 50.993 151 70 2 9 158 20 167 3.22e-51 169
Msa1439050 AT2G02450.1 52.597 154 65 2 9 160 53 200 4.09e-51 172
Msa1439050 AT1G12260.2 43.000 200 97 5 1 192 1 191 4.22e-51 171
Msa1439050 AT2G02450.2 52.597 154 65 2 9 160 53 200 4.44e-51 173
Msa1439050 AT3G15170.1 50.299 167 66 3 7 164 20 178 6.21e-51 170
Msa1439050 AT5G13180.1 55.000 160 61 3 3 159 10 161 8.83e-51 168
Msa1439050 AT1G12260.1 43.000 200 97 5 1 192 1 191 1.05e-50 172
Msa1439050 AT5G18270.1 52.469 162 61 3 5 158 19 172 2.39e-50 169
Msa1439050 AT1G62700.1 48.466 163 74 3 1 159 1 157 2.93e-50 171
Msa1439050 AT1G62700.2 48.466 163 74 3 1 159 1 157 2.93e-50 171
Msa1439050 AT5G18270.2 52.469 162 61 3 5 158 19 172 3.00e-50 169
Msa1439050 AT1G56010.2 49.432 176 82 4 6 177 18 190 3.19e-50 169
Msa1439050 AT4G10350.1 48.837 172 80 3 7 174 9 176 4.08e-50 169
Msa1439050 AT4G36160.2 50.625 160 69 3 4 159 11 164 4.94e-50 169
Msa1439050 AT5G46590.1 51.250 160 71 4 3 158 2 158 5.26e-50 167
Msa1439050 AT4G36160.1 50.625 160 69 3 4 159 7 160 5.40e-50 169
Msa1439050 AT4G36160.3 50.625 160 69 3 4 159 7 160 5.40e-50 169
Msa1439050 AT2G18060.3 49.068 161 72 3 4 160 6 160 7.47e-50 169
Msa1439050 AT2G18060.1 49.068 161 72 3 4 160 6 160 7.47e-50 169
Msa1439050 AT1G79580.3 47.024 168 77 3 3 165 13 173 1.06e-49 168
Msa1439050 AT1G79580.5 47.024 168 77 3 3 165 13 173 1.06e-49 168
Msa1439050 AT1G79580.4 47.024 168 77 3 3 165 13 173 1.06e-49 168
Msa1439050 AT1G79580.2 47.024 168 77 3 3 165 13 173 1.06e-49 168
Msa1439050 AT1G79580.1 47.024 168 77 3 3 165 13 173 1.06e-49 168
Msa1439050 AT3G10490.1 47.159 176 87 3 4 176 24 196 1.79e-49 164
Msa1439050 AT4G17980.1 50.932 161 72 4 3 158 2 160 1.90e-49 165
Msa1439050 AT4G17980.2 50.932 161 72 4 3 158 2 160 2.08e-49 166
Msa1439050 AT1G71930.2 49.359 156 69 3 7 158 9 158 2.88e-49 166
Msa1439050 AT1G71930.1 49.359 156 69 3 7 158 9 158 2.88e-49 166
Msa1439050 AT1G54330.1 50.920 163 70 3 5 164 4 159 4.95e-49 165
Msa1439050 AT1G33280.1 48.214 168 76 3 7 170 8 168 8.71e-49 164
Msa1439050 AT3G10480.1 46.893 177 88 3 3 176 23 196 1.06e-48 167
Msa1439050 AT3G12977.1 50.327 153 72 2 7 158 18 167 1.50e-48 163
Msa1439050 AT1G65910.1 50.602 166 72 4 5 164 4 165 2.00e-48 170
Msa1439050 AT5G46590.2 52.778 144 64 2 3 142 2 145 2.53e-48 162
Msa1439050 AT5G66300.1 48.466 163 75 3 4 162 9 166 2.63e-48 162
Msa1439050 AT1G32510.1 46.073 191 89 4 1 181 1 187 2.65e-48 162
Msa1439050 AT3G10480.2 47.458 177 86 4 3 176 23 195 3.03e-48 166
Msa1439050 AT3G10490.2 47.159 176 87 3 4 176 24 196 7.57e-48 166
Msa1439050 AT3G61910.1 39.796 196 99 4 1 177 5 200 3.63e-47 161
Msa1439050 AT2G46770.1 44.186 172 83 3 1 159 10 181 4.39e-47 161
Msa1439050 AT1G33060.2 43.415 205 101 5 7 208 24 216 2.50e-46 165
Msa1439050 AT1G33060.1 43.415 205 101 5 7 208 24 216 2.61e-46 165
Msa1439050 AT5G24590.2 49.682 157 71 3 7 159 13 165 3.66e-46 161
Msa1439050 AT4G28530.1 46.821 173 63 4 6 158 9 172 4.71e-46 158
Msa1439050 AT4G35580.3 48.087 183 78 5 7 184 9 179 5.09e-46 162
Msa1439050 AT4G35580.2 52.229 157 64 4 7 158 9 159 5.55e-46 162
Msa1439050 AT4G35580.1 48.087 183 78 5 7 184 9 179 5.89e-46 162
Msa1439050 AT1G32770.1 43.529 170 86 3 1 160 10 179 1.44e-45 157
Msa1439050 AT3G49530.2 45.143 175 88 3 7 177 13 183 1.50e-45 159
Msa1439050 AT3G49530.1 45.143 175 88 3 7 177 13 183 4.54e-45 159
Msa1439050 AT3G10480.3 40.952 210 85 4 3 176 23 229 7.86e-45 159
Msa1439050 AT3G10500.1 49.045 157 73 3 7 160 9 161 1.36e-44 159
Msa1439050 AT3G12910.1 48.315 178 76 7 2 165 17 192 6.65e-44 151
Msa1439050 AT1G34180.3 43.860 171 89 3 9 176 18 184 2.68e-43 153
Msa1439050 AT5G04410.1 47.771 157 75 3 7 160 9 161 4.72e-43 155
Msa1439050 AT2G17040.1 47.097 155 67 4 9 158 8 152 1.39e-42 147
Msa1439050 AT1G34180.1 43.860 171 89 3 9 176 18 184 2.12e-42 153
Msa1439050 AT1G34190.1 43.275 171 90 3 9 176 18 184 4.98e-41 149
Msa1439050 AT1G34180.4 41.530 183 88 3 9 176 18 196 5.58e-41 147
Msa1439050 AT5G09330.5 44.720 161 82 4 3 160 2 158 2.23e-40 146
Msa1439050 AT5G09330.2 44.720 161 82 4 3 160 2 158 2.23e-40 146
Msa1439050 AT5G09330.4 44.720 161 82 4 3 160 2 158 2.23e-40 146
Msa1439050 AT5G09330.3 44.720 161 82 4 3 160 2 158 2.23e-40 146
Msa1439050 AT5G09330.1 44.720 161 82 4 3 160 2 158 2.23e-40 146
Msa1439050 AT1G34180.2 41.530 183 88 3 9 176 18 196 3.26e-40 147
Msa1439050 AT2G27300.1 45.033 151 70 3 7 155 14 153 2.90e-39 140
Msa1439050 AT3G44290.2 43.624 149 71 3 9 155 16 153 3.13e-39 137
Msa1439050 AT5G64060.1 40.678 177 98 4 3 176 2 174 3.34e-39 140
Msa1439050 AT3G44290.1 43.624 149 71 3 9 155 16 153 2.51e-38 138
Msa1439050 AT5G22290.1 42.857 154 74 4 9 159 23 165 6.69e-38 137
Msa1439050 AT1G32870.2 50.314 159 68 5 7 160 10 162 2.85e-37 139
Msa1439050 AT1G32870.1 50.314 159 68 5 7 160 10 162 3.58e-37 138
Msa1439050 AT1G32870.3 50.314 159 68 5 7 160 46 198 4.26e-37 139
Msa1439050 AT5G61430.2 57.009 107 43 2 55 160 1 105 9.80e-35 127
Msa1439050 AT1G56010.1 50.000 126 57 3 55 177 1 123 1.42e-33 123
Msa1439050 AT5G22380.1 33.333 249 129 9 4 237 2 228 4.06e-33 121
Msa1439050 AT3G44350.2 33.333 213 117 8 6 201 4 208 6.19e-33 121
Msa1439050 AT5G64530.1 39.205 176 82 4 5 167 1 164 1.03e-32 119
Msa1439050 AT2G33480.3 56.436 101 39 3 60 159 8 104 5.07e-32 118
Msa1439050 AT3G44350.1 38.509 161 79 6 6 151 4 159 2.32e-31 115
Msa1439050 AT5G04395.1 40.816 147 70 3 6 135 27 173 2.60e-31 115
Msa1439050 AT4G10350.2 50.862 116 52 2 60 174 18 129 2.67e-31 118
Msa1439050 AT3G12977.2 50.926 108 49 2 52 158 10 114 3.36e-31 116
Msa1439050 AT5G64530.2 45.385 130 56 3 5 131 1 118 4.35e-30 111
Msa1439050 AT4G28530.2 37.059 170 47 3 6 158 9 135 5.61e-29 112
Msa1439050 AT4G01550.1 40.769 130 70 3 10 132 7 136 1.96e-26 108
Msa1439050 AT4G01520.1 36.538 156 82 5 8 155 5 151 7.13e-26 104
Msa1439050 AT4G01540.4 37.013 154 80 5 10 155 7 151 7.43e-25 102
Msa1439050 AT4G01540.3 32.812 192 107 7 10 189 7 188 9.84e-25 102
Msa1439050 AT4G01540.2 37.013 154 80 5 10 155 7 151 1.17e-24 102
Msa1439050 AT4G01540.1 37.013 154 80 5 10 155 7 151 1.47e-24 102
Msa1439050 AT3G04420.2 40.769 130 72 3 5 129 1 130 9.17e-24 98.2
Msa1439050 AT3G04420.1 40.769 130 72 3 5 129 1 130 2.06e-23 98.2
Msa1439050 AT1G02230.1 36.296 135 75 4 8 134 4 135 1.81e-22 95.9
Msa1439050 AT2G43000.2 47.253 91 44 2 69 158 2 89 3.59e-22 92.0
Msa1439050 AT5G14000.2 36.000 150 91 3 1 147 9 156 2.11e-21 88.6
Msa1439050 AT5G14000.1 33.742 163 96 4 1 160 9 162 3.80e-21 89.4
Msa1439050 AT3G10490.4 44.898 98 50 2 80 176 2 96 2.14e-20 90.1
Msa1439050 AT3G10490.3 44.898 98 50 2 80 176 2 96 2.14e-20 90.1
Msa1439050 AT3G56530.1 35.032 157 86 6 7 156 52 199 2.36e-20 89.4
Msa1439050 AT1G02220.1 33.333 165 93 5 5 164 1 153 2.36e-20 90.5
Msa1439050 AT1G02250.1 38.462 130 69 4 8 129 4 130 1.17e-19 88.2
Msa1439050 AT1G01010.1 35.252 139 73 5 5 129 1 136 3.02e-17 81.6
Msa1439050 AT2G18060.2 46.753 77 34 2 85 160 2 72 1.89e-15 75.1
Msa1439050 AT5G50820.1 33.577 137 74 6 4 133 14 140 1.04e-13 68.6
Msa1439050 AT5G22290.2 42.105 76 31 3 86 159 2 66 2.75e-11 62.8
Msa1439050 AT4G29230.1 33.333 153 72 8 7 132 48 197 3.30e-11 63.9
Msa1439050 AT4G29230.2 33.333 153 72 8 7 132 47 196 3.68e-11 63.9
Msa1439050 AT4G29230.3 33.117 154 73 8 7 133 48 198 5.27e-11 63.2
Msa1439050 AT3G04430.1 33.582 134 70 6 13 130 6 136 5.52e-11 61.2

Find 122 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTAGGGTTTGTTGAATT+TGG 0.180719 tig0028698:+44621 Msa1439050:three_prime_UTR
ATCCAATTAGGCATGTTATT+AGG 0.202654 tig0028698:+44751 Msa1439050:three_prime_UTR
AAATCAATTTCTTTGATAAT+AGG 0.219498 tig0028698:-43426 None:intergenic
TCCAATTAGGCATGTTATTA+GGG 0.225184 tig0028698:+44752 Msa1439050:three_prime_UTR
AATGACCATTTGGGAGGATT+AGG 0.250459 tig0028698:+44458 Msa1439050:three_prime_UTR
TGAAAATCAAAGGCTGAAAC+TGG 0.273975 tig0028698:-44264 None:intergenic
CCCCTAATAACATGCCTAAT+TGG 0.277744 tig0028698:-44753 None:intergenic
GGGCTGCGGGAACCGGATAT+TGG 0.287906 tig0028698:+43662 Msa1439050:CDS
TACTAGGGTTTGTTGAATTT+GGG 0.300795 tig0028698:+44622 Msa1439050:three_prime_UTR
GAAAATTGAAAATGACCATT+TGG 0.304176 tig0028698:+44448 Msa1439050:three_prime_UTR
GGCATGTTATTAGGGGTATA+TGG 0.340002 tig0028698:+44760 Msa1439050:three_prime_UTR
TTCTTTATCCCAAGTGCCTT+CGG 0.348007 tig0028698:-43718 None:intergenic
TTTACAGAAATGGCTCTTTA+CGG 0.351320 tig0028698:+43574 Msa1439050:intron
TTTGATCCATGGCATCTTCC+AGG 0.357407 tig0028698:+43456 Msa1439050:CDS
AATAACAAATTAAATTTACT+TGG 0.360188 tig0028698:-44388 None:intergenic
AACCCGAAAATTGATTCATT+TGG 0.363530 tig0028698:-44341 None:intergenic
AAAATTGAAAATGACCATTT+GGG 0.367814 tig0028698:+44449 Msa1439050:three_prime_UTR
AAGTGGAATGAATTTGTATT+GGG 0.373773 tig0028698:+44234 Msa1439050:CDS
TAATGGTGCATGTCTGATCT+TGG 0.383752 tig0028698:+44590 Msa1439050:three_prime_UTR
ATTAATTGCAGCTTGATGAT+TGG 0.388930 tig0028698:+43959 Msa1439050:intron
TTGATAATAGGAACAGCTAC+AGG 0.390807 tig0028698:-43414 None:intergenic
CCGAACCGGGCTGCGGGAAC+CGG 0.391909 tig0028698:+43655 Msa1439050:CDS
AGTGTTACTGTTAACATGTA+AGG 0.392554 tig0028698:+44788 Msa1439050:three_prime_UTR
AGGATTAGGGATCCTAAAAT+TGG 0.395578 tig0028698:+44472 Msa1439050:three_prime_UTR
ATGACCATTTGGGAGGATTA+GGG 0.396512 tig0028698:+44459 Msa1439050:three_prime_UTR
CCAAAGGAATTAAAACCAAT+TGG 0.402035 tig0028698:+43770 Msa1439050:CDS
CGGTTCGGCCTTGAACCGTT+TGG 0.403070 tig0028698:-43640 None:intergenic
CCGGTTCCCGCAGCCCGGTT+CGG 0.410215 tig0028698:-43655 None:intergenic
TCAAAGGCTGAAACTGGGTC+TGG 0.410879 tig0028698:-44258 None:intergenic
TGAGTTCGAAGTTGTGAGAA+AGG 0.411148 tig0028698:-43183 None:intergenic
AGTTGCAGTTAGTATTTGTT+TGG 0.411894 tig0028698:-44553 None:intergenic
TTAATTGCAGCTTGATGATT+GGG 0.412168 tig0028698:+43960 Msa1439050:intron
CAAGTGGAATGAATTTGTAT+TGG 0.415048 tig0028698:+44233 Msa1439050:CDS
AGTGTTGGTTGGTGGCTGCT+AGG 0.418122 tig0028698:-43234 None:intergenic
TGGTTGAAATTTAAGAAAAG+TGG 0.419169 tig0028698:+44668 Msa1439050:three_prime_UTR
TCTTCTTCTTCAGTGTTGGT+TGG 0.420782 tig0028698:-43245 None:intergenic
GTAAATATCCAAACGGTTCA+AGG 0.423042 tig0028698:+43632 Msa1439050:CDS
TGTCGAATTTACAACAAGAA+AGG 0.430099 tig0028698:+43988 Msa1439050:CDS
ATCTTGGGTAGGTGATTACT+AGG 0.434038 tig0028698:+44606 Msa1439050:three_prime_UTR
TACTGATCCTGAGGGGCAAA+AGG 0.435530 tig0028698:-44318 None:intergenic
CAAATTAAATTTACTTGGGC+AGG 0.439187 tig0028698:-44383 None:intergenic
CAAACGGTTCAAGGCCGAAC+CGG 0.440323 tig0028698:+43641 Msa1439050:CDS
TTCAAGGCCGAACCGGGCTG+CGG 0.445265 tig0028698:+43648 Msa1439050:CDS
CAATACAAATTCATTCCACT+TGG 0.450741 tig0028698:-44232 None:intergenic
AATAGAAATAGGTCATGGTC+TGG 0.452417 tig0028698:+44420 Msa1439050:three_prime_UTR
AATGGTGCATGTCTGATCTT+GGG 0.455923 tig0028698:+44591 Msa1439050:three_prime_UTR
ATAGAAATAGGTCATGGTCT+GGG 0.460816 tig0028698:+44421 Msa1439050:three_prime_UTR
GCAGTTAGTATTTGTTTGGT+AGG 0.465487 tig0028698:-44549 None:intergenic
TCTTCTTCAGTGTTGGTTGG+TGG 0.470870 tig0028698:-43242 None:intergenic
GGTTGAAATTTAAGAAAAGT+GGG 0.472430 tig0028698:+44669 Msa1439050:three_prime_UTR
TTTGGATATTTACGATCCCT+TGG 0.476106 tig0028698:-43622 None:intergenic
TCCGGTCGCCTTCCAATATC+CGG 0.478603 tig0028698:-43674 None:intergenic
CCTAAAATTGGAGGGTCCCA+TGG 0.480588 tig0028698:+44484 Msa1439050:three_prime_UTR
TCAAGGCCGAACCGGGCTGC+GGG 0.480914 tig0028698:+43649 Msa1439050:CDS
TCCAATCGGCTTATCAGCTC+CGG 0.481369 tig0028698:-43692 None:intergenic
CGTGGTTTCACCGTGCGATA+AGG 0.482787 tig0028698:+44194 Msa1439050:CDS
CAGTTGAATCTTATGGATGA+TGG 0.485236 tig0028698:+44285 Msa1439050:CDS
ATACTCATGCATGATCCAAT+TGG 0.485541 tig0028698:-43785 None:intergenic
CAAAGGCTGAAACTGGGTCT+GGG 0.487541 tig0028698:-44257 None:intergenic
ATTGGAAAGCCGAAGGCACT+TGG 0.488594 tig0028698:+43709 Msa1439050:CDS
GTCGAATTTACAACAAGAAA+GGG 0.491222 tig0028698:+43989 Msa1439050:CDS
TGTGAGAAAGGAAGAAGTTG+TGG 0.504684 tig0028698:-43171 None:intergenic
GTGTTGGTTGGTGGCTGCTA+GGG 0.507815 tig0028698:-43233 None:intergenic
ACTGCAAGTGGAGCTTCTAA+TGG 0.512363 tig0028698:+44573 Msa1439050:three_prime_UTR
TTCATTTGGTACTGATCCTG+AGG 0.513979 tig0028698:-44327 None:intergenic
AACTAGGCGAAGATCCAATT+AGG 0.515527 tig0028698:+44739 Msa1439050:three_prime_UTR
AATGATCTCGATTCTCAACT+AGG 0.517949 tig0028698:+44723 Msa1439050:three_prime_UTR
AATATCCGGTTCCCGCAGCC+CGG 0.524402 tig0028698:-43660 None:intergenic
AGTGCCTTCGGCTTTCCAAT+CGG 0.524558 tig0028698:-43706 None:intergenic
ATTTGTATAAGTTTGATCCA+TGG 0.528456 tig0028698:+43445 Msa1439050:CDS
AAACGGTTCAAGGCCGAACC+GGG 0.528831 tig0028698:+43642 Msa1439050:CDS
ATACTAACTGCAACTGCAAG+TGG 0.529536 tig0028698:+44561 Msa1439050:three_prime_UTR
GCTGCTAGGGTAGTTAGTAT+TGG 0.532321 tig0028698:-43220 None:intergenic
TCAGATCAAGATGAACGGCC+AGG 0.532358 tig0028698:+44086 Msa1439050:CDS
GTCGGGTGAAATCTGAAGCC+AGG 0.534952 tig0028698:-43342 None:intergenic
GTACACTGACACATCAGATT+CGG 0.536856 tig0028698:+44134 Msa1439050:CDS
CACTGTTCCTAAAATCATCC+TGG 0.536982 tig0028698:-44104 None:intergenic
TGGCCGTTCATCTTGATCTG+AGG 0.540560 tig0028698:-44084 None:intergenic
ACCGGATATTGGAAGGCGAC+CGG 0.540712 tig0028698:+43673 Msa1439050:CDS
TCTTGGGTAGGTGATTACTA+GGG 0.549155 tig0028698:+44607 Msa1439050:three_prime_UTR
GGATCCCTAATCCTCCCAAA+TGG 0.552239 tig0028698:-44463 None:intergenic
TGCGGGAACCGGATATTGGA+AGG 0.555135 tig0028698:+43666 Msa1439050:CDS
ATAACAAATTAAATTTACTT+GGG 0.555352 tig0028698:-44387 None:intergenic
TGACAAGCTCATCATCAGTC+GGG 0.555923 tig0028698:-43359 None:intergenic
ACCGGAGCTGATAAGCCGAT+TGG 0.556049 tig0028698:+43691 Msa1439050:CDS
ACTGATCCTGAGGGGCAAAA+GGG 0.560321 tig0028698:-44317 None:intergenic
CTCTTTACGGTGAGAAAGAG+TGG 0.566657 tig0028698:+43587 Msa1439050:CDS
AAGATTCAACTGAAAATCAA+AGG 0.566776 tig0028698:-44274 None:intergenic
ATGTACATACTCTTAAATTG+TGG 0.566838 tig0028698:-43846 None:intergenic
CTCAAGCGGTTCTGAGCACG+TGG 0.568997 tig0028698:+44176 Msa1439050:CDS
ATTAGGGATCCTAAAATTGG+AGG 0.571106 tig0028698:+44475 Msa1439050:three_prime_UTR
TGAGCTTCCTCAGAAAACAT+TGG 0.577453 tig0028698:-44042 None:intergenic
ATTGAATATACGCGAATGCA+AGG 0.577743 tig0028698:+43303 Msa1439050:exon
TAAGTACCTGGAAGATGCCA+TGG 0.577977 tig0028698:-43462 None:intergenic
ATTGAAAATGACCATTTGGG+AGG 0.580131 tig0028698:+44452 Msa1439050:three_prime_UTR
CTTTGAACTTCCTTATCGCA+CGG 0.587532 tig0028698:-44204 None:intergenic
AGGGATCGTAAATATCCAAA+CGG 0.593976 tig0028698:+43625 Msa1439050:CDS
TTGACAAGCTCATCATCAGT+CGG 0.594991 tig0028698:-43360 None:intergenic
GAAAATCAAAGGCTGAAACT+GGG 0.599958 tig0028698:-44263 None:intergenic
AATACAAATTCATTCCACTT+GGG 0.602517 tig0028698:-44231 None:intergenic
ACACATCAGATTCGGTGCCA+CGG 0.603238 tig0028698:+44142 Msa1439050:CDS
TCATTTGGTACTGATCCTGA+GGG 0.603683 tig0028698:-44326 None:intergenic
GTTGAAATTTAAGAAAAGTG+GGG 0.606864 tig0028698:+44670 Msa1439050:three_prime_UTR
TAGAAATAGGTCATGGTCTG+GGG 0.608175 tig0028698:+44422 Msa1439050:three_prime_UTR
AAGTTCAAAGTGAGCCCAAG+TGG 0.609329 tig0028698:+44217 Msa1439050:CDS
TTGGAAAGCCGAAGGCACTT+GGG 0.610579 tig0028698:+43710 Msa1439050:CDS
CGGTTTCACACCGACTCAAG+CGG 0.614416 tig0028698:+44162 Msa1439050:CDS
TTAGGGATCCTAAAATTGGA+GGG 0.619634 tig0028698:+44476 Msa1439050:three_prime_UTR
TTAGTAATAGAAATAGGTCA+TGG 0.629502 tig0028698:+44415 Msa1439050:three_prime_UTR
GTGCTCAGAACCGCTTGAGT+CGG 0.630980 tig0028698:-44172 None:intergenic
AATAGGAACAGCTACAGGGA+GGG 0.637721 tig0028698:-43409 None:intergenic
CTTGAGTCGGTGTGAAACCG+TGG 0.640274 tig0028698:-44159 None:intergenic
GGAGCATTAGAATTACCACC+TGG 0.643311 tig0028698:+43324 Msa1439050:CDS
CCAATTAGGCATGTTATTAG+GGG 0.644452 tig0028698:+44753 Msa1439050:three_prime_UTR
TATGCTGGCAAAGCTCCCAA+AGG 0.653423 tig0028698:+43754 Msa1439050:CDS
AAACCTCAGATCAAGATGAA+CGG 0.656051 tig0028698:+44081 Msa1439050:CDS
TGATAATAGGAACAGCTACA+GGG 0.657698 tig0028698:-43413 None:intergenic
GTGCATGTCTGATCTTGGGT+AGG 0.661579 tig0028698:+44595 Msa1439050:three_prime_UTR
TAAGCCGATTGGAAAGCCGA+AGG 0.696583 tig0028698:+43702 Msa1439050:CDS
TAATAGGAACAGCTACAGGG+AGG 0.713279 tig0028698:-43410 None:intergenic
GGGTGAAATCTGAAGCCAGG+TGG 0.722817 tig0028698:-43339 None:intergenic
CATTTGGTACTGATCCTGAG+GGG 0.747553 tig0028698:-44325 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAATTAAATTTACTT+GGG - tig0028698:44390-44409 None:intergenic 10.0%
!! AATAACAAATTAAATTTACT+TGG - tig0028698:44391-44410 None:intergenic 10.0%
!! ATAACAAATTAAATTTACTT+GGG - tig0028698:44390-44409 None:intergenic 10.0%
!! AATAACAAATTAAATTTACT+TGG - tig0028698:44391-44410 None:intergenic 10.0%
!!! AAATCAATTTCTTTGATAAT+AGG - tig0028698:43429-43448 None:intergenic 15.0%
!!! ATATTTTAATGCTAATTATG+TGG + tig0028698:43538-43557 Msa1439050:intron 15.0%
!!! ATATTGATTTTTCATTAGTA+TGG + tig0028698:44648-44667 Msa1439050:three_prime_UTR 15.0%
!!! AAATCAATTTCTTTGATAAT+AGG - tig0028698:43429-43448 None:intergenic 15.0%
!!! ATATTTTAATGCTAATTATG+TGG + tig0028698:43538-43557 Msa1439050:intron 15.0%
!!! ATATTGATTTTTCATTAGTA+TGG + tig0028698:44648-44667 Msa1439050:three_prime_UTR 15.0%
!! CACAAGAAATAAAATTGATT+TGG - tig0028698:43876-43895 None:intergenic 20.0%
!!! TTTTCGTTAGTAATAGAAAT+AGG + tig0028698:44409-44428 Msa1439050:three_prime_UTR 20.0%
!! AAAATTGAAAATGACCATTT+GGG + tig0028698:44449-44468 Msa1439050:three_prime_UTR 20.0%
!! AACCAATTTAAAAAATCCAT+GGG - tig0028698:44503-44522 None:intergenic 20.0%
!! CACAAGAAATAAAATTGATT+TGG - tig0028698:43876-43895 None:intergenic 20.0%
!!! TTTTCGTTAGTAATAGAAAT+AGG + tig0028698:44409-44428 Msa1439050:three_prime_UTR 20.0%
!! AAAATTGAAAATGACCATTT+GGG + tig0028698:44449-44468 Msa1439050:three_prime_UTR 20.0%
!! AACCAATTTAAAAAATCCAT+GGG - tig0028698:44503-44522 None:intergenic 20.0%
! ATTTGTATAAGTTTGATCCA+TGG + tig0028698:43445-43464 Msa1439050:CDS 25.0%
! GTTGTATGTATTTACAGAAA+TGG + tig0028698:43564-43583 Msa1439050:intron 25.0%
!!! CAATTGGTTTTAATTCCTTT+GGG - tig0028698:43772-43791 None:intergenic 25.0%
!!! ATTGTGGTTATTTTTTGAAG+CGG - tig0028698:43833-43852 None:intergenic 25.0%
! ATGTACATACTCTTAAATTG+TGG - tig0028698:43849-43868 None:intergenic 25.0%
! AATACAAATTCATTCCACTT+GGG - tig0028698:44234-44253 None:intergenic 25.0%
! AAGTGGAATGAATTTGTATT+GGG + tig0028698:44234-44253 Msa1439050:CDS 25.0%
! AAGATTCAACTGAAAATCAA+AGG - tig0028698:44277-44296 None:intergenic 25.0%
!! TGATTTTCAGTTGAATCTTA+TGG + tig0028698:44278-44297 Msa1439050:CDS 25.0%
!! GTACCAAATGAATCAATTTT+CGG + tig0028698:44338-44357 Msa1439050:CDS 25.0%
!! TACCAAATGAATCAATTTTC+GGG + tig0028698:44339-44358 Msa1439050:CDS 25.0%
! TTAGTAATAGAAATAGGTCA+TGG + tig0028698:44415-44434 Msa1439050:three_prime_UTR 25.0%
! GAAAATTGAAAATGACCATT+TGG + tig0028698:44448-44467 Msa1439050:three_prime_UTR 25.0%
! CAACCAATTTAAAAAATCCA+TGG - tig0028698:44504-44523 None:intergenic 25.0%
! TGGTTGAAATTTAAGAAAAG+TGG + tig0028698:44668-44687 Msa1439050:three_prime_UTR 25.0%
! GGTTGAAATTTAAGAAAAGT+GGG + tig0028698:44669-44688 Msa1439050:three_prime_UTR 25.0%
! GTTGAAATTTAAGAAAAGTG+GGG + tig0028698:44670-44689 Msa1439050:three_prime_UTR 25.0%
! ATTTGTATAAGTTTGATCCA+TGG + tig0028698:43445-43464 Msa1439050:CDS 25.0%
! GTTGTATGTATTTACAGAAA+TGG + tig0028698:43564-43583 Msa1439050:intron 25.0%
!!! CAATTGGTTTTAATTCCTTT+GGG - tig0028698:43772-43791 None:intergenic 25.0%
!!! ATTGTGGTTATTTTTTGAAG+CGG - tig0028698:43833-43852 None:intergenic 25.0%
! ATGTACATACTCTTAAATTG+TGG - tig0028698:43849-43868 None:intergenic 25.0%
! AATACAAATTCATTCCACTT+GGG - tig0028698:44234-44253 None:intergenic 25.0%
! AAGTGGAATGAATTTGTATT+GGG + tig0028698:44234-44253 Msa1439050:CDS 25.0%
! AAGATTCAACTGAAAATCAA+AGG - tig0028698:44277-44296 None:intergenic 25.0%
!! TGATTTTCAGTTGAATCTTA+TGG + tig0028698:44278-44297 Msa1439050:CDS 25.0%
!! GTACCAAATGAATCAATTTT+CGG + tig0028698:44338-44357 Msa1439050:CDS 25.0%
!! TACCAAATGAATCAATTTTC+GGG + tig0028698:44339-44358 Msa1439050:CDS 25.0%
! TTAGTAATAGAAATAGGTCA+TGG + tig0028698:44415-44434 Msa1439050:three_prime_UTR 25.0%
! GAAAATTGAAAATGACCATT+TGG + tig0028698:44448-44467 Msa1439050:three_prime_UTR 25.0%
! CAACCAATTTAAAAAATCCA+TGG - tig0028698:44504-44523 None:intergenic 25.0%
! TGGTTGAAATTTAAGAAAAG+TGG + tig0028698:44668-44687 Msa1439050:three_prime_UTR 25.0%
! GGTTGAAATTTAAGAAAAGT+GGG + tig0028698:44669-44688 Msa1439050:three_prime_UTR 25.0%
! GTTGAAATTTAAGAAAAGTG+GGG + tig0028698:44670-44689 Msa1439050:three_prime_UTR 25.0%
!!! AAGAAGTTGTGGTTTTATAG+GGG - tig0028698:43163-43182 None:intergenic 30.0%
!!! GAAGAAGTTGTGGTTTTATA+GGG - tig0028698:43164-43183 None:intergenic 30.0%
! TTTTTCTTCTTCTTCAGTGT+TGG - tig0028698:43252-43271 None:intergenic 30.0%
GAAAATAAAGAGTAAGTACC+TGG - tig0028698:43477-43496 None:intergenic 30.0%
TTTACAGAAATGGCTCTTTA+CGG + tig0028698:43574-43593 Msa1439050:intron 30.0%
!!! CCAATTGGTTTTAATTCCTT+TGG - tig0028698:43773-43792 None:intergenic 30.0%
CCAAAGGAATTAAAACCAAT+TGG + tig0028698:43770-43789 Msa1439050:CDS 30.0%
! ATTAATTGCAGCTTGATGAT+TGG + tig0028698:43959-43978 Msa1439050:intron 30.0%
! TTAATTGCAGCTTGATGATT+GGG + tig0028698:43960-43979 Msa1439050:intron 30.0%
TGTCGAATTTACAACAAGAA+AGG + tig0028698:43988-44007 Msa1439050:CDS 30.0%
GTCGAATTTACAACAAGAAA+GGG + tig0028698:43989-44008 Msa1439050:CDS 30.0%
! TAAATCACCAATGTTTTCTG+AGG + tig0028698:44035-44054 Msa1439050:CDS 30.0%
CAATACAAATTCATTCCACT+TGG - tig0028698:44235-44254 None:intergenic 30.0%
CAAGTGGAATGAATTTGTAT+TGG + tig0028698:44233-44252 Msa1439050:CDS 30.0%
! AACCCGAAAATTGATTCATT+TGG - tig0028698:44344-44363 None:intergenic 30.0%
!!! AAATGAATCAATTTTCGGGT+TGG + tig0028698:44343-44362 Msa1439050:CDS 30.0%
CAAATTAAATTTACTTGGGC+AGG - tig0028698:44386-44405 None:intergenic 30.0%
!!! GTCCCATGGATTTTTTAAAT+TGG + tig0028698:44498-44517 Msa1439050:three_prime_UTR 30.0%
AGTTGCAGTTAGTATTTGTT+TGG - tig0028698:44556-44575 None:intergenic 30.0%
!! TTACTAGGGTTTGTTGAATT+TGG + tig0028698:44621-44640 Msa1439050:three_prime_UTR 30.0%
!! TACTAGGGTTTGTTGAATTT+GGG + tig0028698:44622-44641 Msa1439050:three_prime_UTR 30.0%
ATCCAATTAGGCATGTTATT+AGG + tig0028698:44751-44770 Msa1439050:three_prime_UTR 30.0%
TCCAATTAGGCATGTTATTA+GGG + tig0028698:44752-44771 Msa1439050:three_prime_UTR 30.0%
! AGTGTTACTGTTAACATGTA+AGG + tig0028698:44788-44807 Msa1439050:three_prime_UTR 30.0%
!!! AAGAAGTTGTGGTTTTATAG+GGG - tig0028698:43163-43182 None:intergenic 30.0%
!!! GAAGAAGTTGTGGTTTTATA+GGG - tig0028698:43164-43183 None:intergenic 30.0%
! TTTTTCTTCTTCTTCAGTGT+TGG - tig0028698:43252-43271 None:intergenic 30.0%
GAAAATAAAGAGTAAGTACC+TGG - tig0028698:43477-43496 None:intergenic 30.0%
TTTACAGAAATGGCTCTTTA+CGG + tig0028698:43574-43593 Msa1439050:intron 30.0%
!!! CCAATTGGTTTTAATTCCTT+TGG - tig0028698:43773-43792 None:intergenic 30.0%
CCAAAGGAATTAAAACCAAT+TGG + tig0028698:43770-43789 Msa1439050:CDS 30.0%
! ATTAATTGCAGCTTGATGAT+TGG + tig0028698:43959-43978 Msa1439050:intron 30.0%
! TTAATTGCAGCTTGATGATT+GGG + tig0028698:43960-43979 Msa1439050:intron 30.0%
TGTCGAATTTACAACAAGAA+AGG + tig0028698:43988-44007 Msa1439050:CDS 30.0%
GTCGAATTTACAACAAGAAA+GGG + tig0028698:43989-44008 Msa1439050:CDS 30.0%
! TAAATCACCAATGTTTTCTG+AGG + tig0028698:44035-44054 Msa1439050:CDS 30.0%
CAATACAAATTCATTCCACT+TGG - tig0028698:44235-44254 None:intergenic 30.0%
CAAGTGGAATGAATTTGTAT+TGG + tig0028698:44233-44252 Msa1439050:CDS 30.0%
! AACCCGAAAATTGATTCATT+TGG - tig0028698:44344-44363 None:intergenic 30.0%
!!! AAATGAATCAATTTTCGGGT+TGG + tig0028698:44343-44362 Msa1439050:CDS 30.0%
CAAATTAAATTTACTTGGGC+AGG - tig0028698:44386-44405 None:intergenic 30.0%
!!! GTCCCATGGATTTTTTAAAT+TGG + tig0028698:44498-44517 Msa1439050:three_prime_UTR 30.0%
AGTTGCAGTTAGTATTTGTT+TGG - tig0028698:44556-44575 None:intergenic 30.0%
!! TTACTAGGGTTTGTTGAATT+TGG + tig0028698:44621-44640 Msa1439050:three_prime_UTR 30.0%
!! TACTAGGGTTTGTTGAATTT+GGG + tig0028698:44622-44641 Msa1439050:three_prime_UTR 30.0%
ATCCAATTAGGCATGTTATT+AGG + tig0028698:44751-44770 Msa1439050:three_prime_UTR 30.0%
TCCAATTAGGCATGTTATTA+GGG + tig0028698:44752-44771 Msa1439050:three_prime_UTR 30.0%
! AGTGTTACTGTTAACATGTA+AGG + tig0028698:44788-44807 Msa1439050:three_prime_UTR 30.0%
!!! GGAAGAAGTTGTGGTTTTAT+AGG - tig0028698:43165-43184 None:intergenic 35.0%
ATTGAATATACGCGAATGCA+AGG + tig0028698:43303-43322 Msa1439050:exon 35.0%
TGATAATAGGAACAGCTACA+GGG - tig0028698:43416-43435 None:intergenic 35.0%
! TTGATAATAGGAACAGCTAC+AGG - tig0028698:43417-43436 None:intergenic 35.0%
AACATACACTTCTGATCTGA+TGG + tig0028698:43503-43522 Msa1439050:intron 35.0%
!!! AGTGGTATTTTTTCTCTCCA+AGG + tig0028698:43605-43624 Msa1439050:CDS 35.0%
!!! GTGGTATTTTTTCTCTCCAA+GGG + tig0028698:43606-43625 Msa1439050:CDS 35.0%
TTTGGATATTTACGATCCCT+TGG - tig0028698:43625-43644 None:intergenic 35.0%
AGGGATCGTAAATATCCAAA+CGG + tig0028698:43625-43644 Msa1439050:CDS 35.0%
GTAAATATCCAAACGGTTCA+AGG + tig0028698:43632-43651 Msa1439050:CDS 35.0%
ATACTCATGCATGATCCAAT+TGG - tig0028698:43788-43807 None:intergenic 35.0%
AAACCTCAGATCAAGATGAA+CGG + tig0028698:44081-44100 Msa1439050:CDS 35.0%
GAAAATCAAAGGCTGAAACT+GGG - tig0028698:44266-44285 None:intergenic 35.0%
TGAAAATCAAAGGCTGAAAC+TGG - tig0028698:44267-44286 None:intergenic 35.0%
CAGTTGAATCTTATGGATGA+TGG + tig0028698:44285-44304 Msa1439050:CDS 35.0%
AATAGAAATAGGTCATGGTC+TGG + tig0028698:44420-44439 Msa1439050:three_prime_UTR 35.0%
ATAGAAATAGGTCATGGTCT+GGG + tig0028698:44421-44440 Msa1439050:three_prime_UTR 35.0%
ATTGAAAATGACCATTTGGG+AGG + tig0028698:44452-44471 Msa1439050:three_prime_UTR 35.0%
AGGATTAGGGATCCTAAAAT+TGG + tig0028698:44472-44491 Msa1439050:three_prime_UTR 35.0%
ATTAGGGATCCTAAAATTGG+AGG + tig0028698:44475-44494 Msa1439050:three_prime_UTR 35.0%
TTAGGGATCCTAAAATTGGA+GGG + tig0028698:44476-44495 Msa1439050:three_prime_UTR 35.0%
GCAGTTAGTATTTGTTTGGT+AGG - tig0028698:44552-44571 None:intergenic 35.0%
AATGATCTCGATTCTCAACT+AGG + tig0028698:44723-44742 Msa1439050:three_prime_UTR 35.0%
CCAATTAGGCATGTTATTAG+GGG + tig0028698:44753-44772 Msa1439050:three_prime_UTR 35.0%
!!! GGAAGAAGTTGTGGTTTTAT+AGG - tig0028698:43165-43184 None:intergenic 35.0%
ATTGAATATACGCGAATGCA+AGG + tig0028698:43303-43322 Msa1439050:exon 35.0%
TGATAATAGGAACAGCTACA+GGG - tig0028698:43416-43435 None:intergenic 35.0%
! TTGATAATAGGAACAGCTAC+AGG - tig0028698:43417-43436 None:intergenic 35.0%
AACATACACTTCTGATCTGA+TGG + tig0028698:43503-43522 Msa1439050:intron 35.0%
!!! AGTGGTATTTTTTCTCTCCA+AGG + tig0028698:43605-43624 Msa1439050:CDS 35.0%
!!! GTGGTATTTTTTCTCTCCAA+GGG + tig0028698:43606-43625 Msa1439050:CDS 35.0%
TTTGGATATTTACGATCCCT+TGG - tig0028698:43625-43644 None:intergenic 35.0%
AGGGATCGTAAATATCCAAA+CGG + tig0028698:43625-43644 Msa1439050:CDS 35.0%
GTAAATATCCAAACGGTTCA+AGG + tig0028698:43632-43651 Msa1439050:CDS 35.0%
ATACTCATGCATGATCCAAT+TGG - tig0028698:43788-43807 None:intergenic 35.0%
AAACCTCAGATCAAGATGAA+CGG + tig0028698:44081-44100 Msa1439050:CDS 35.0%
GAAAATCAAAGGCTGAAACT+GGG - tig0028698:44266-44285 None:intergenic 35.0%
TGAAAATCAAAGGCTGAAAC+TGG - tig0028698:44267-44286 None:intergenic 35.0%
CAGTTGAATCTTATGGATGA+TGG + tig0028698:44285-44304 Msa1439050:CDS 35.0%
AATAGAAATAGGTCATGGTC+TGG + tig0028698:44420-44439 Msa1439050:three_prime_UTR 35.0%
ATAGAAATAGGTCATGGTCT+GGG + tig0028698:44421-44440 Msa1439050:three_prime_UTR 35.0%
ATTGAAAATGACCATTTGGG+AGG + tig0028698:44452-44471 Msa1439050:three_prime_UTR 35.0%
AGGATTAGGGATCCTAAAAT+TGG + tig0028698:44472-44491 Msa1439050:three_prime_UTR 35.0%
ATTAGGGATCCTAAAATTGG+AGG + tig0028698:44475-44494 Msa1439050:three_prime_UTR 35.0%
TTAGGGATCCTAAAATTGGA+GGG + tig0028698:44476-44495 Msa1439050:three_prime_UTR 35.0%
GCAGTTAGTATTTGTTTGGT+AGG - tig0028698:44552-44571 None:intergenic 35.0%
AATGATCTCGATTCTCAACT+AGG + tig0028698:44723-44742 Msa1439050:three_prime_UTR 35.0%
CCAATTAGGCATGTTATTAG+GGG + tig0028698:44753-44772 Msa1439050:three_prime_UTR 35.0%
!!! GTTGTGGTTTTATAGGGGAT+AGG - tig0028698:43158-43177 None:intergenic 40.0%
TGTGAGAAAGGAAGAAGTTG+TGG - tig0028698:43174-43193 None:intergenic 40.0%
TGAGTTCGAAGTTGTGAGAA+AGG - tig0028698:43186-43205 None:intergenic 40.0%
!! TCTTCTTCTTCAGTGTTGGT+TGG - tig0028698:43248-43267 None:intergenic 40.0%
TTGACAAGCTCATCATCAGT+CGG - tig0028698:43363-43382 None:intergenic 40.0%
TTCTTTATCCCAAGTGCCTT+CGG - tig0028698:43721-43740 None:intergenic 40.0%
!! AAAGCACTCGTTTTCTATGC+TGG + tig0028698:43739-43758 Msa1439050:CDS 40.0%
TGAGCTTCCTCAGAAAACAT+TGG - tig0028698:44045-44064 None:intergenic 40.0%
CACTGTTCCTAAAATCATCC+TGG - tig0028698:44107-44126 None:intergenic 40.0%
GTACACTGACACATCAGATT+CGG + tig0028698:44134-44153 Msa1439050:CDS 40.0%
CTTTGAACTTCCTTATCGCA+CGG - tig0028698:44207-44226 None:intergenic 40.0%
!! TCATTTGGTACTGATCCTGA+GGG - tig0028698:44329-44348 None:intergenic 40.0%
!! TTCATTTGGTACTGATCCTG+AGG - tig0028698:44330-44349 None:intergenic 40.0%
TAGAAATAGGTCATGGTCTG+GGG + tig0028698:44422-44441 Msa1439050:three_prime_UTR 40.0%
AATGACCATTTGGGAGGATT+AGG + tig0028698:44458-44477 Msa1439050:three_prime_UTR 40.0%
ATGACCATTTGGGAGGATTA+GGG + tig0028698:44459-44478 Msa1439050:three_prime_UTR 40.0%
ATACTAACTGCAACTGCAAG+TGG + tig0028698:44561-44580 Msa1439050:three_prime_UTR 40.0%
TAATGGTGCATGTCTGATCT+TGG + tig0028698:44590-44609 Msa1439050:three_prime_UTR 40.0%
AATGGTGCATGTCTGATCTT+GGG + tig0028698:44591-44610 Msa1439050:three_prime_UTR 40.0%
ATCTTGGGTAGGTGATTACT+AGG + tig0028698:44606-44625 Msa1439050:three_prime_UTR 40.0%
TCTTGGGTAGGTGATTACTA+GGG + tig0028698:44607-44626 Msa1439050:three_prime_UTR 40.0%
AACTAGGCGAAGATCCAATT+AGG + tig0028698:44739-44758 Msa1439050:three_prime_UTR 40.0%
CCCCTAATAACATGCCTAAT+TGG - tig0028698:44756-44775 None:intergenic 40.0%
! GGCATGTTATTAGGGGTATA+TGG + tig0028698:44760-44779 Msa1439050:three_prime_UTR 40.0%
!!! GTTGTGGTTTTATAGGGGAT+AGG - tig0028698:43158-43177 None:intergenic 40.0%
TGTGAGAAAGGAAGAAGTTG+TGG - tig0028698:43174-43193 None:intergenic 40.0%
TGAGTTCGAAGTTGTGAGAA+AGG - tig0028698:43186-43205 None:intergenic 40.0%
!! TCTTCTTCTTCAGTGTTGGT+TGG - tig0028698:43248-43267 None:intergenic 40.0%
TTGACAAGCTCATCATCAGT+CGG - tig0028698:43363-43382 None:intergenic 40.0%
TTCTTTATCCCAAGTGCCTT+CGG - tig0028698:43721-43740 None:intergenic 40.0%
!! AAAGCACTCGTTTTCTATGC+TGG + tig0028698:43739-43758 Msa1439050:CDS 40.0%
TGAGCTTCCTCAGAAAACAT+TGG - tig0028698:44045-44064 None:intergenic 40.0%
CACTGTTCCTAAAATCATCC+TGG - tig0028698:44107-44126 None:intergenic 40.0%
GTACACTGACACATCAGATT+CGG + tig0028698:44134-44153 Msa1439050:CDS 40.0%
CTTTGAACTTCCTTATCGCA+CGG - tig0028698:44207-44226 None:intergenic 40.0%
!! TCATTTGGTACTGATCCTGA+GGG - tig0028698:44329-44348 None:intergenic 40.0%
!! TTCATTTGGTACTGATCCTG+AGG - tig0028698:44330-44349 None:intergenic 40.0%
TAGAAATAGGTCATGGTCTG+GGG + tig0028698:44422-44441 Msa1439050:three_prime_UTR 40.0%
AATGACCATTTGGGAGGATT+AGG + tig0028698:44458-44477 Msa1439050:three_prime_UTR 40.0%
ATGACCATTTGGGAGGATTA+GGG + tig0028698:44459-44478 Msa1439050:three_prime_UTR 40.0%
ATACTAACTGCAACTGCAAG+TGG + tig0028698:44561-44580 Msa1439050:three_prime_UTR 40.0%
TAATGGTGCATGTCTGATCT+TGG + tig0028698:44590-44609 Msa1439050:three_prime_UTR 40.0%
AATGGTGCATGTCTGATCTT+GGG + tig0028698:44591-44610 Msa1439050:three_prime_UTR 40.0%
ATCTTGGGTAGGTGATTACT+AGG + tig0028698:44606-44625 Msa1439050:three_prime_UTR 40.0%
TCTTGGGTAGGTGATTACTA+GGG + tig0028698:44607-44626 Msa1439050:three_prime_UTR 40.0%
AACTAGGCGAAGATCCAATT+AGG + tig0028698:44739-44758 Msa1439050:three_prime_UTR 40.0%
CCCCTAATAACATGCCTAAT+TGG - tig0028698:44756-44775 None:intergenic 40.0%
! GGCATGTTATTAGGGGTATA+TGG + tig0028698:44760-44779 Msa1439050:three_prime_UTR 40.0%
GCTGCTAGGGTAGTTAGTAT+TGG - tig0028698:43223-43242 None:intergenic 45.0%
!! TCTTCTTCAGTGTTGGTTGG+TGG - tig0028698:43245-43264 None:intergenic 45.0%
! GGAGCATTAGAATTACCACC+TGG + tig0028698:43324-43343 Msa1439050:CDS 45.0%
TGACAAGCTCATCATCAGTC+GGG - tig0028698:43362-43381 None:intergenic 45.0%
AATAGGAACAGCTACAGGGA+GGG - tig0028698:43412-43431 None:intergenic 45.0%
TAATAGGAACAGCTACAGGG+AGG - tig0028698:43413-43432 None:intergenic 45.0%
TTTGATCCATGGCATCTTCC+AGG + tig0028698:43456-43475 Msa1439050:CDS 45.0%
TAAGTACCTGGAAGATGCCA+TGG - tig0028698:43465-43484 None:intergenic 45.0%
CTCTTTACGGTGAGAAAGAG+TGG + tig0028698:43587-43606 Msa1439050:CDS 45.0%
! TGAACGGCCAGGATGATTTT+AGG + tig0028698:44097-44116 Msa1439050:CDS 45.0%
AAGTTCAAAGTGAGCCCAAG+TGG + tig0028698:44217-44236 Msa1439050:CDS 45.0%
!! CATTTGGTACTGATCCTGAG+GGG - tig0028698:44328-44347 None:intergenic 45.0%
ACTGCAAGTGGAGCTTCTAA+TGG + tig0028698:44573-44592 Msa1439050:three_prime_UTR 45.0%
GCTGCTAGGGTAGTTAGTAT+TGG - tig0028698:43223-43242 None:intergenic 45.0%
!! TCTTCTTCAGTGTTGGTTGG+TGG - tig0028698:43245-43264 None:intergenic 45.0%
! GGAGCATTAGAATTACCACC+TGG + tig0028698:43324-43343 Msa1439050:CDS 45.0%
TGACAAGCTCATCATCAGTC+GGG - tig0028698:43362-43381 None:intergenic 45.0%
AATAGGAACAGCTACAGGGA+GGG - tig0028698:43412-43431 None:intergenic 45.0%
TAATAGGAACAGCTACAGGG+AGG - tig0028698:43413-43432 None:intergenic 45.0%
TTTGATCCATGGCATCTTCC+AGG + tig0028698:43456-43475 Msa1439050:CDS 45.0%
TAAGTACCTGGAAGATGCCA+TGG - tig0028698:43465-43484 None:intergenic 45.0%
CTCTTTACGGTGAGAAAGAG+TGG + tig0028698:43587-43606 Msa1439050:CDS 45.0%
! TGAACGGCCAGGATGATTTT+AGG + tig0028698:44097-44116 Msa1439050:CDS 45.0%
AAGTTCAAAGTGAGCCCAAG+TGG + tig0028698:44217-44236 Msa1439050:CDS 45.0%
!! CATTTGGTACTGATCCTGAG+GGG - tig0028698:44328-44347 None:intergenic 45.0%
ACTGCAAGTGGAGCTTCTAA+TGG + tig0028698:44573-44592 Msa1439050:three_prime_UTR 45.0%
! TCCAATCGGCTTATCAGCTC+CGG - tig0028698:43695-43714 None:intergenic 50.0%
TAAGCCGATTGGAAAGCCGA+AGG + tig0028698:43702-43721 Msa1439050:CDS 50.0%
AGTGCCTTCGGCTTTCCAAT+CGG - tig0028698:43709-43728 None:intergenic 50.0%
!! ATTGGAAAGCCGAAGGCACT+TGG + tig0028698:43709-43728 Msa1439050:CDS 50.0%
!! TTGGAAAGCCGAAGGCACTT+GGG + tig0028698:43710-43729 Msa1439050:CDS 50.0%
TATGCTGGCAAAGCTCCCAA+AGG + tig0028698:43754-43773 Msa1439050:CDS 50.0%
TGGCCGTTCATCTTGATCTG+AGG - tig0028698:44087-44106 None:intergenic 50.0%
TCAGATCAAGATGAACGGCC+AGG + tig0028698:44086-44105 Msa1439050:CDS 50.0%
!! ACACATCAGATTCGGTGCCA+CGG + tig0028698:44142-44161 Msa1439050:CDS 50.0%
CAAAGGCTGAAACTGGGTCT+GGG - tig0028698:44260-44279 None:intergenic 50.0%
TCAAAGGCTGAAACTGGGTC+TGG - tig0028698:44261-44280 None:intergenic 50.0%
ACTGATCCTGAGGGGCAAAA+GGG - tig0028698:44320-44339 None:intergenic 50.0%
TACTGATCCTGAGGGGCAAA+AGG - tig0028698:44321-44340 None:intergenic 50.0%
GGATCCCTAATCCTCCCAAA+TGG - tig0028698:44466-44485 None:intergenic 50.0%
! CCATGGGACCCTCCAATTTT+AGG - tig0028698:44487-44506 None:intergenic 50.0%
CCTAAAATTGGAGGGTCCCA+TGG + tig0028698:44484-44503 Msa1439050:three_prime_UTR 50.0%
GTGCATGTCTGATCTTGGGT+AGG + tig0028698:44595-44614 Msa1439050:three_prime_UTR 50.0%
! TCCAATCGGCTTATCAGCTC+CGG - tig0028698:43695-43714 None:intergenic 50.0%
TAAGCCGATTGGAAAGCCGA+AGG + tig0028698:43702-43721 Msa1439050:CDS 50.0%
AGTGCCTTCGGCTTTCCAAT+CGG - tig0028698:43709-43728 None:intergenic 50.0%
!! ATTGGAAAGCCGAAGGCACT+TGG + tig0028698:43709-43728 Msa1439050:CDS 50.0%
!! TTGGAAAGCCGAAGGCACTT+GGG + tig0028698:43710-43729 Msa1439050:CDS 50.0%
TATGCTGGCAAAGCTCCCAA+AGG + tig0028698:43754-43773 Msa1439050:CDS 50.0%
TGGCCGTTCATCTTGATCTG+AGG - tig0028698:44087-44106 None:intergenic 50.0%
TCAGATCAAGATGAACGGCC+AGG + tig0028698:44086-44105 Msa1439050:CDS 50.0%
!! ACACATCAGATTCGGTGCCA+CGG + tig0028698:44142-44161 Msa1439050:CDS 50.0%
CAAAGGCTGAAACTGGGTCT+GGG - tig0028698:44260-44279 None:intergenic 50.0%
TCAAAGGCTGAAACTGGGTC+TGG - tig0028698:44261-44280 None:intergenic 50.0%
ACTGATCCTGAGGGGCAAAA+GGG - tig0028698:44320-44339 None:intergenic 50.0%
TACTGATCCTGAGGGGCAAA+AGG - tig0028698:44321-44340 None:intergenic 50.0%
GGATCCCTAATCCTCCCAAA+TGG - tig0028698:44466-44485 None:intergenic 50.0%
! CCATGGGACCCTCCAATTTT+AGG - tig0028698:44487-44506 None:intergenic 50.0%
CCTAAAATTGGAGGGTCCCA+TGG + tig0028698:44484-44503 Msa1439050:three_prime_UTR 50.0%
GTGCATGTCTGATCTTGGGT+AGG + tig0028698:44595-44614 Msa1439050:three_prime_UTR 50.0%
!! GTGTTGGTTGGTGGCTGCTA+GGG - tig0028698:43236-43255 None:intergenic 55.0%
!! AGTGTTGGTTGGTGGCTGCT+AGG - tig0028698:43237-43256 None:intergenic 55.0%
! GGGTGAAATCTGAAGCCAGG+TGG - tig0028698:43342-43361 None:intergenic 55.0%
! GTCGGGTGAAATCTGAAGCC+AGG - tig0028698:43345-43364 None:intergenic 55.0%
CAAACGGTTCAAGGCCGAAC+CGG + tig0028698:43641-43660 Msa1439050:CDS 55.0%
AAACGGTTCAAGGCCGAACC+GGG + tig0028698:43642-43661 Msa1439050:CDS 55.0%
TGCGGGAACCGGATATTGGA+AGG + tig0028698:43666-43685 Msa1439050:CDS 55.0%
ACCGGATATTGGAAGGCGAC+CGG + tig0028698:43673-43692 Msa1439050:CDS 55.0%
TCCGGTCGCCTTCCAATATC+CGG - tig0028698:43677-43696 None:intergenic 55.0%
ACCGGAGCTGATAAGCCGAT+TGG + tig0028698:43691-43710 Msa1439050:CDS 55.0%
CTTGAGTCGGTGTGAAACCG+TGG - tig0028698:44162-44181 None:intergenic 55.0%
!! CGGTTTCACACCGACTCAAG+CGG + tig0028698:44162-44181 Msa1439050:CDS 55.0%
GTGCTCAGAACCGCTTGAGT+CGG - tig0028698:44175-44194 None:intergenic 55.0%
CGTGGTTTCACCGTGCGATA+AGG + tig0028698:44194-44213 Msa1439050:CDS 55.0%
! AGATGACCCTTTTGCCCCTC+AGG + tig0028698:44311-44330 Msa1439050:CDS 55.0%
!! GTGTTGGTTGGTGGCTGCTA+GGG - tig0028698:43236-43255 None:intergenic 55.0%
!! AGTGTTGGTTGGTGGCTGCT+AGG - tig0028698:43237-43256 None:intergenic 55.0%
! GGGTGAAATCTGAAGCCAGG+TGG - tig0028698:43342-43361 None:intergenic 55.0%
! GTCGGGTGAAATCTGAAGCC+AGG - tig0028698:43345-43364 None:intergenic 55.0%
CAAACGGTTCAAGGCCGAAC+CGG + tig0028698:43641-43660 Msa1439050:CDS 55.0%
AAACGGTTCAAGGCCGAACC+GGG + tig0028698:43642-43661 Msa1439050:CDS 55.0%
TGCGGGAACCGGATATTGGA+AGG + tig0028698:43666-43685 Msa1439050:CDS 55.0%
ACCGGATATTGGAAGGCGAC+CGG + tig0028698:43673-43692 Msa1439050:CDS 55.0%
TCCGGTCGCCTTCCAATATC+CGG - tig0028698:43677-43696 None:intergenic 55.0%
ACCGGAGCTGATAAGCCGAT+TGG + tig0028698:43691-43710 Msa1439050:CDS 55.0%
CTTGAGTCGGTGTGAAACCG+TGG - tig0028698:44162-44181 None:intergenic 55.0%
!! CGGTTTCACACCGACTCAAG+CGG + tig0028698:44162-44181 Msa1439050:CDS 55.0%
GTGCTCAGAACCGCTTGAGT+CGG - tig0028698:44175-44194 None:intergenic 55.0%
CGTGGTTTCACCGTGCGATA+AGG + tig0028698:44194-44213 Msa1439050:CDS 55.0%
! AGATGACCCTTTTGCCCCTC+AGG + tig0028698:44311-44330 Msa1439050:CDS 55.0%
! CGGTTCGGCCTTGAACCGTT+TGG - tig0028698:43643-43662 None:intergenic 60.0%
AATATCCGGTTCCCGCAGCC+CGG - tig0028698:43663-43682 None:intergenic 60.0%
!! CTCAAGCGGTTCTGAGCACG+TGG + tig0028698:44176-44195 Msa1439050:CDS 60.0%
! CGGTTCGGCCTTGAACCGTT+TGG - tig0028698:43643-43662 None:intergenic 60.0%
AATATCCGGTTCCCGCAGCC+CGG - tig0028698:43663-43682 None:intergenic 60.0%
!! CTCAAGCGGTTCTGAGCACG+TGG + tig0028698:44176-44195 Msa1439050:CDS 60.0%
TTCAAGGCCGAACCGGGCTG+CGG + tig0028698:43648-43667 Msa1439050:CDS 65.0%
GGGCTGCGGGAACCGGATAT+TGG + tig0028698:43662-43681 Msa1439050:CDS 65.0%
TTCAAGGCCGAACCGGGCTG+CGG + tig0028698:43648-43667 Msa1439050:CDS 65.0%
GGGCTGCGGGAACCGGATAT+TGG + tig0028698:43662-43681 Msa1439050:CDS 65.0%
TCAAGGCCGAACCGGGCTGC+GGG + tig0028698:43649-43668 Msa1439050:CDS 70.0%
TCAAGGCCGAACCGGGCTGC+GGG + tig0028698:43649-43668 Msa1439050:CDS 70.0%
CCGGTTCCCGCAGCCCGGTT+CGG - tig0028698:43658-43677 None:intergenic 75.0%
CCGAACCGGGCTGCGGGAAC+CGG + tig0028698:43655-43674 Msa1439050:CDS 75.0%
CCGGTTCCCGCAGCCCGGTT+CGG - tig0028698:43658-43677 None:intergenic 75.0%
CCGAACCGGGCTGCGGGAAC+CGG + tig0028698:43655-43674 Msa1439050:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0028698 gene 43153 44861 43153 ID=Msa1439050;Name=Msa1439050
tig0028698 mRNA 43153 44861 43153 ID=Msa1439050-mRNA-1;Parent=Msa1439050;Name=Msa1439050-mRNA-1;_AED=0.06;_eAED=0.06;_QI=165|1|1|1|1|1|3|466|287
tig0028698 exon 43153 43477 43153 ID=Msa1439050-mRNA-1:exon:11566;Parent=Msa1439050-mRNA-1
tig0028698 exon 43581 43858 43581 ID=Msa1439050-mRNA-1:exon:11567;Parent=Msa1439050-mRNA-1
tig0028698 exon 43970 44861 43970 ID=Msa1439050-mRNA-1:exon:11568;Parent=Msa1439050-mRNA-1
tig0028698 five_prime_UTR 43153 43317 43153 ID=Msa1439050-mRNA-1:five_prime_utr;Parent=Msa1439050-mRNA-1
tig0028698 CDS 43318 43477 43318 ID=Msa1439050-mRNA-1:cds;Parent=Msa1439050-mRNA-1
tig0028698 CDS 43581 43858 43581 ID=Msa1439050-mRNA-1:cds;Parent=Msa1439050-mRNA-1
tig0028698 CDS 43970 44395 43970 ID=Msa1439050-mRNA-1:cds;Parent=Msa1439050-mRNA-1
tig0028698 three_prime_UTR 44396 44861 44396 ID=Msa1439050-mRNA-1:three_prime_utr;Parent=Msa1439050-mRNA-1
Gene Sequence

>Msa1439050

ATGCAAGGAGCATTAGAATTACCACCTGGCTTCAGATTTCACCCGACTGATGATGAGCTTGTCAATCACTACTTGTGTAGAAAGTGTGCTTCCCTCCCTGTAGCTGTTCCTATTATCAAAGAAATTGATTTGTATAAGTTTGATCCATGGCATCTTCCAGAAATGGCTCTTTACGGTGAGAAAGAGTGGTATTTTTTCTCTCCAAGGGATCGTAAATATCCAAACGGTTCAAGGCCGAACCGGGCTGCGGGAACCGGATATTGGAAGGCGACCGGAGCTGATAAGCCGATTGGAAAGCCGAAGGCACTTGGGATAAAGAAAGCACTCGTTTTCTATGCTGGCAAAGCTCCCAAAGGAATTAAAACCAATTGGATCATGCATGAGTATCGTCTTGCTAATGTTGATAGATCCGCTTCAAAAAATAACCACAATTTAAGACTTGATGATTGGGTCTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAATGACACTAAATCACCAATGTTTTCTGAGGAAGCTCAATTTGAGAATGAGACAAAACCTCAGATCAAGATGAACGGCCAGGATGATTTTAGGAACAGTGATCAATTGTACACTGACACATCAGATTCGGTGCCACGGTTTCACACCGACTCAAGCGGTTCTGAGCACGTGGTTTCACCGTGCGATAAGGAAGTTCAAAGTGAGCCCAAGTGGAATGAATTTGTATTGGGCCCAGACCCAGTTTCAGCCTTTGATTTTCAGTTGAATCTTATGGATGATGGTGAAGATGACCCTTTTGCCCCTCAGGATCAGTACCAAATGAATCAATTTTCGGGTTGGCAAGATGTGTTTATGTACCTGCCCAAGTAA
Protein sequence

>Msa1439050

MQGALELPPGFRFHPTDDELVNHYLCRKCASLPVAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASKNNHNLRLDDWVLCRIYNKKGKIEKYNDTKSPMFSEEAQFENETKPQIKMNGQDDFRNSDQLYTDTSDSVPRFHTDSSGSEHVVSPCDKEVQSEPKWNEFVLGPDPVSAFDFQLNLMDDGEDDPFAPQDQYQMNQFSGWQDVFMYLPK*