AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0619370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619370 MtrunA17_Chr8g0384721 87.372 293 10 6 1 274 1 285 0.0 504
Msa0619370 MtrunA17_Chr3g0130731 65.203 296 69 7 1 271 1 287 1.21e-125 359
Msa0619370 MtrunA17_Chr3g0124761 60.269 297 84 7 1 274 1 286 9.91e-113 326
Msa0619370 MtrunA17_Chr2g0318101 65.432 162 33 2 7 145 15 176 2.21e-72 226
Msa0619370 MtrunA17_Chr2g0318081 67.516 157 41 2 5 151 14 170 7.03e-72 224
Msa0619370 MtrunA17_Chr8g0359921 67.925 159 39 2 5 151 12 170 1.39e-70 220
Msa0619370 MtrunA17_Chr7g0252971 54.589 207 65 4 7 185 8 213 1.53e-70 221
Msa0619370 MtrunA17_Chr4g0047841 61.143 175 33 2 6 145 14 188 2.13e-68 215
Msa0619370 MtrunA17_Chr5g0417791 44.128 281 107 9 5 265 1 251 2.96e-67 209
Msa0619370 MtrunA17_Chr4g0042561 60.759 158 48 2 3 146 5 162 2.80e-66 207
Msa0619370 MtrunA17_Chr2g0326361 53.476 187 61 3 7 177 14 190 3.25e-66 209
Msa0619370 MtrunA17_Chr7g0263931 54.098 183 67 3 5 170 9 191 2.43e-65 207
Msa0619370 MtrunA17_Chr2g0309891 38.535 314 145 10 5 271 4 316 2.73e-58 189
Msa0619370 MtrunA17_Chr5g0417001 41.350 237 105 6 7 212 14 247 7.81e-58 189
Msa0619370 MtrunA17_Chr8g0361731 52.532 158 54 2 9 145 16 173 8.01e-55 182
Msa0619370 MtrunA17_Chr4g0060931 54.088 159 61 2 5 151 15 173 7.56e-54 178
Msa0619370 MtrunA17_Chr6g0453131 49.697 165 63 2 6 150 14 178 7.61e-54 179
Msa0619370 MtrunA17_Chr6g0484441 54.248 153 62 2 7 151 5 157 2.13e-53 176
Msa0619370 MtrunA17_Chr4g0018391 47.727 176 79 4 1 163 1 176 5.93e-53 175
Msa0619370 MtrunA17_Chr3g0139331 53.846 156 62 2 7 152 11 166 7.42e-53 175
Msa0619370 MtrunA17_Chr6g0453451 54.194 155 59 2 5 147 18 172 9.20e-53 174
Msa0619370 MtrunA17_Chr8g0372121 50.968 155 65 3 7 150 6 160 3.42e-52 172
Msa0619370 MtrunA17_Chr6g0481091 52.288 153 61 3 7 147 6 158 3.92e-52 170
Msa0619370 MtrunA17_Chr4g0076731 55.405 148 57 2 9 147 56 203 4.59e-52 175
Msa0619370 MtrunA17_Chr1g0147421 50.000 174 72 4 1 159 17 190 8.11e-52 173
Msa0619370 MtrunA17_Chr3g0091921 55.556 153 56 3 5 145 14 166 8.63e-52 171
Msa0619370 MtrunA17_Chr5g0433781 53.503 157 61 3 5 149 4 160 2.95e-51 177
Msa0619370 MtrunA17_Chr5g0400461 50.000 170 66 4 3 156 2 168 5.60e-51 170
Msa0619370 MtrunA17_Chr2g0316971 54.248 153 56 2 7 145 23 175 5.87e-51 171
Msa0619370 MtrunA17_Chr1g0183741 53.289 152 62 3 7 150 10 160 7.58e-51 168
Msa0619370 MtrunA17_Chr3g0109821 54.430 158 59 4 5 149 4 161 1.08e-50 176
Msa0619370 MtrunA17_Chr5g0398971 49.686 159 67 3 1 146 1 159 1.09e-50 169
Msa0619370 MtrunA17_Chr7g0214071 55.128 156 55 4 2 146 10 161 1.39e-50 167
Msa0619370 MtrunA17_Chr4g0056541 48.193 166 74 4 1 154 1 166 2.51e-50 169
Msa0619370 MtrunA17_Chr5g0442771 50.000 166 61 2 9 152 20 185 3.09e-50 167
Msa0619370 MtrunA17_Chr5g0405211 51.656 151 62 3 7 146 8 158 3.38e-50 168
Msa0619370 MtrunA17_Chr4g0017921 53.333 150 60 3 7 146 8 157 5.74e-50 168
Msa0619370 MtrunA17_Chr7g0253011 51.220 164 64 3 4 151 14 177 5.92e-50 169
Msa0619370 MtrunA17_Chr2g0309331 48.795 166 71 4 1 152 2 167 1.37e-49 167
Msa0619370 MtrunA17_Chr6g0461661 52.903 155 59 3 5 145 16 170 8.75e-49 166
Msa0619370 MtrunA17_Chr7g0261411 52.740 146 61 2 7 144 10 155 1.65e-48 162
Msa0619370 MtrunA17_Chr1g0200561 43.716 183 86 4 7 172 19 201 1.84e-48 164
Msa0619370 MtrunA17_Chr2g0311651 40.367 218 101 5 9 200 24 238 2.40e-48 162
Msa0619370 MtrunA17_Chr7g0217721 44.633 177 73 2 5 156 17 193 3.48e-47 160
Msa0619370 MtrunA17_Chr2g0311661 41.256 223 94 6 9 201 23 238 4.98e-47 159
Msa0619370 MtrunA17_Chr4g0054791 50.000 168 64 5 1 151 1 165 6.32e-47 159
Msa0619370 MtrunA17_Chr2g0312321 42.439 205 100 5 6 199 10 207 1.09e-46 158
Msa0619370 MtrunA17_Chr7g0217711 54.198 131 59 1 5 134 17 147 6.45e-46 152
Msa0619370 MtrunA17_Chr5g0428991 53.595 153 59 4 6 146 24 176 9.94e-46 162
Msa0619370 MtrunA17_Chr8g0346001 43.605 172 75 4 1 150 9 180 6.79e-45 157
Msa0619370 MtrunA17_Chr3g0144271 57.364 129 51 2 7 131 23 151 6.72e-44 154
Msa0619370 MtrunA17_Chr3g0128151 51.656 151 61 4 7 145 22 172 1.69e-43 155
Msa0619370 MtrunA17_Chr8g0385991 44.253 174 78 3 2 158 9 180 2.22e-43 147
Msa0619370 MtrunA17_Chr3g0130101 47.059 153 69 3 7 147 7 159 6.60e-43 149
Msa0619370 MtrunA17_Chr1g0201021 52.206 136 61 3 9 141 21 155 8.01e-42 150
Msa0619370 MtrunA17_Chr3g0131911 47.879 165 64 3 2 146 9 171 1.84e-41 142
Msa0619370 MtrunA17_Chr4g0038751 46.000 150 73 3 9 150 17 166 2.42e-41 144
Msa0619370 MtrunA17_Chr3g0128111 47.297 148 66 4 10 145 45 192 3.47e-41 142
Msa0619370 MtrunA17_Chr3g0092671 44.751 181 87 5 4 172 2 181 8.00e-41 147
Msa0619370 MtrunA17_Chr1g0197361 44.311 167 81 4 9 163 10 176 1.38e-40 147
Msa0619370 MtrunA17_Chr8g0345671 48.980 147 64 5 6 142 10 155 6.25e-40 143
Msa0619370 MtrunA17_Chr1g0197351 47.134 157 65 3 7 145 42 198 1.36e-39 143
Msa0619370 MtrunA17_Chr8g0364791 43.506 154 75 3 6 147 5 158 2.91e-39 142
Msa0619370 MtrunA17_Chr8g0384201 41.558 154 78 3 6 147 5 158 1.26e-36 135
Msa0619370 MtrunA17_Chr4g0050701 40.764 157 67 3 7 145 11 159 3.60e-34 122
Msa0619370 MtrunA17_Chr8g0345691 42.466 146 73 5 7 142 12 156 9.84e-34 126
Msa0619370 MtrunA17_Chr4g0026141 39.157 166 82 4 7 153 5 170 1.46e-33 122
Msa0619370 MtrunA17_Chr3g0113001 50.407 123 48 2 52 161 10 132 4.07e-33 122
Msa0619370 MtrunA17_Chr2g0321631 34.016 244 126 8 8 223 5 241 3.20e-32 119
Msa0619370 MtrunA17_Chr2g0321741 47.321 112 55 3 35 142 20 131 7.14e-32 120
Msa0619370 MtrunA17_Chr8g0384351 43.226 155 68 5 2 151 5 144 8.77e-32 116
Msa0619370 MtrunA17_Chr7g0266701 30.303 231 127 7 7 212 4 225 2.20e-31 117
Msa0619370 MtrunA17_Chr8g0345711 40.645 155 84 5 7 154 12 165 1.22e-30 112
Msa0619370 MtrunA17_Chr8g0345731 42.424 132 68 4 7 130 24 155 1.22e-28 107
Msa0619370 MtrunA17_Chr8g0345721 37.037 162 66 5 10 136 38 198 5.49e-26 101
Msa0619370 MtrunA17_Chr3g0113031 48.113 106 41 2 70 161 3 108 7.98e-25 100
Msa0619370 MtrunA17_Chr8g0345741 41.441 111 59 3 38 143 23 132 1.45e-23 93.6
Msa0619370 MtrunA17_Chr8g0345701 37.333 150 71 6 1 130 1 147 2.34e-23 93.6
Msa0619370 MtrunA17_Chr3g0130321 32.121 165 84 4 1 143 1 159 2.99e-22 91.7
Msa0619370 MtrunA17_Chr7g0243371 54.667 75 31 1 60 131 17 91 2.05e-21 87.0
Msa0619370 MtrunA17_Chr7g0251661 31.159 138 88 4 3 136 6 140 3.59e-18 79.3
Msa0619370 MtrunA17_Chr7g0251651 31.387 137 87 4 2 134 13 146 7.74e-18 79.3
Msa0619370 MtrunA17_Chr7g0251671 29.323 133 87 4 6 134 9 138 8.07e-16 73.2
Msa0619370 MtrunA17_Chr7g0274971 31.928 166 93 7 13 161 11 173 2.79e-11 61.6
Msa0619370 MtrunA17_Chr8g0389661 31.646 158 79 7 5 136 45 199 2.94e-11 63.5
Msa0619370 MtrunA17_Chr4g0040541 30.345 145 82 5 7 133 48 191 4.13e-11 62.0
Msa0619370 MtrunA17_Chr8g0367761 29.861 144 83 5 7 133 68 210 4.93e-11 61.6
Msa0619370 MtrunA17_Chr4g0046431 29.861 144 83 5 7 133 68 210 6.79e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619370 AT1G01720.1 59.655 290 98 6 1 274 1 287 1.51e-109 318
Msa0619370 AT5G08790.1 59.722 288 74 8 1 267 1 267 4.74e-107 312
Msa0619370 AT5G63790.1 56.757 296 68 9 1 273 44 302 2.45e-100 296
Msa0619370 AT5G63790.2 56.757 296 68 9 1 273 54 312 4.13e-100 296
Msa0619370 AT1G77450.1 56.923 260 56 7 5 249 8 226 1.49e-88 264
Msa0619370 AT1G52890.1 68.153 157 40 2 5 151 12 168 2.11e-72 225
Msa0619370 AT4G27410.2 64.497 169 50 2 5 163 12 180 4.73e-72 223
Msa0619370 AT3G15500.1 67.284 162 41 3 5 154 12 173 5.42e-72 224
Msa0619370 AT1G69490.1 52.913 206 78 4 7 198 9 209 9.77e-70 216
Msa0619370 AT3G04070.2 63.975 161 36 2 7 145 10 170 1.37e-68 216
Msa0619370 AT1G61110.1 63.855 166 37 2 3 145 12 177 7.14e-68 213
Msa0619370 AT4G27410.3 58.602 186 50 3 5 163 12 197 1.13e-67 213
Msa0619370 AT3G04070.1 58.192 177 36 2 7 145 10 186 4.33e-66 210
Msa0619370 AT3G15510.1 60.000 170 43 3 11 156 21 189 3.28e-64 205
Msa0619370 AT1G52880.1 63.057 157 36 2 11 145 21 177 1.06e-59 192
Msa0619370 AT3G18400.1 55.195 154 60 2 7 151 5 158 9.37e-57 184
Msa0619370 AT5G61430.1 56.774 155 55 3 5 147 14 168 8.57e-56 183
Msa0619370 AT5G39610.1 55.090 167 58 4 5 159 18 179 1.53e-55 181
Msa0619370 AT1G26870.1 51.250 160 57 2 7 145 16 175 3.44e-55 184
Msa0619370 AT5G07680.1 57.516 153 53 3 5 145 15 167 5.42e-55 181
Msa0619370 AT5G07680.2 57.516 153 53 3 5 145 1 153 5.74e-55 180
Msa0619370 AT5G62380.2 48.045 179 82 3 1 168 1 179 6.87e-55 181
Msa0619370 AT5G62380.1 48.045 179 82 3 1 168 1 179 6.87e-55 181
Msa0619370 AT1G76420.1 54.605 152 58 2 7 147 22 173 4.65e-54 178
Msa0619370 AT2G33480.2 56.209 153 56 3 2 146 10 159 1.68e-53 175
Msa0619370 AT2G33480.1 55.484 155 56 3 2 146 10 161 3.22e-53 174
Msa0619370 AT3G04060.1 52.381 168 67 3 2 156 15 182 3.99e-53 176
Msa0619370 AT5G39820.1 46.286 175 61 2 9 150 22 196 4.06e-53 176
Msa0619370 AT2G24430.2 53.503 157 62 2 7 152 16 172 4.98e-53 175
Msa0619370 AT2G24430.1 53.503 157 62 2 7 152 16 172 4.98e-53 175
Msa0619370 AT3G03200.1 53.896 154 58 3 5 145 4 157 8.54e-53 179
Msa0619370 AT3G17730.1 52.941 153 60 3 7 147 6 158 1.14e-52 172
Msa0619370 AT2G02450.1 46.667 180 86 3 9 179 53 231 4.00e-52 174
Msa0619370 AT3G29035.1 47.692 195 80 5 5 185 22 208 6.25e-52 172
Msa0619370 AT2G02450.2 46.667 180 86 3 9 179 53 231 6.48e-52 175
Msa0619370 AT3G15170.1 51.572 159 63 2 7 151 20 178 1.40e-51 171
Msa0619370 AT5G53950.1 54.902 153 55 2 7 145 17 169 1.44e-51 173
Msa0619370 AT1G12260.2 43.814 194 91 5 1 179 1 191 2.25e-51 171
Msa0619370 AT5G17260.1 53.247 154 59 3 5 145 4 157 4.18e-51 174
Msa0619370 AT1G12260.1 43.814 194 91 5 1 179 1 191 4.92e-51 172
Msa0619370 AT5G13180.1 55.128 156 56 3 2 146 9 161 4.98e-51 168
Msa0619370 AT1G62700.1 50.318 157 67 3 1 146 1 157 1.10e-50 171
Msa0619370 AT1G62700.2 50.318 157 67 3 1 146 1 157 1.10e-50 171
Msa0619370 AT4G36160.1 51.299 154 64 3 4 146 7 160 1.68e-50 170
Msa0619370 AT4G36160.3 51.299 154 64 3 4 146 7 160 1.68e-50 170
Msa0619370 AT4G36160.2 51.299 154 64 3 4 146 11 164 1.80e-50 170
Msa0619370 AT4G10350.1 49.405 168 72 3 7 161 9 176 2.79e-50 169
Msa0619370 AT5G18270.1 54.545 154 57 3 5 145 19 172 2.82e-50 169
Msa0619370 AT2G18060.3 49.677 155 67 3 4 147 6 160 2.84e-50 169
Msa0619370 AT2G18060.1 49.677 155 67 3 4 147 6 160 2.84e-50 169
Msa0619370 AT5G18270.2 54.545 154 57 3 5 145 19 172 3.64e-50 168
Msa0619370 AT2G43000.1 51.351 148 61 2 9 145 20 167 4.82e-50 166
Msa0619370 AT1G33280.1 50.311 161 70 3 7 157 8 168 8.42e-50 166
Msa0619370 AT1G79580.3 49.068 161 71 3 3 152 13 173 8.99e-50 168
Msa0619370 AT1G79580.5 49.068 161 71 3 3 152 13 173 8.99e-50 168
Msa0619370 AT1G79580.4 49.068 161 71 3 3 152 13 173 8.99e-50 168
Msa0619370 AT1G79580.2 49.068 161 71 3 3 152 13 173 8.99e-50 168
Msa0619370 AT1G79580.1 49.068 161 71 3 3 152 13 173 8.99e-50 168
Msa0619370 AT4G17980.1 50.943 159 62 3 3 145 2 160 1.12e-49 165
Msa0619370 AT4G17980.2 50.943 159 62 3 3 145 2 160 1.25e-49 166
Msa0619370 AT1G71930.2 51.333 150 62 3 7 145 9 158 2.72e-49 166
Msa0619370 AT1G71930.1 51.333 150 62 3 7 145 9 158 2.72e-49 166
Msa0619370 AT1G56010.2 47.701 174 77 3 6 165 18 191 5.06e-49 165
Msa0619370 AT1G65910.1 51.572 159 65 3 5 151 4 162 1.15e-48 171
Msa0619370 AT1G54330.1 51.923 156 66 3 5 151 4 159 1.33e-48 163
Msa0619370 AT3G12977.1 50.000 150 64 2 7 145 18 167 3.05e-48 162
Msa0619370 AT5G46590.1 50.318 157 64 3 3 145 2 158 4.04e-48 162
Msa0619370 AT4G28530.1 49.697 165 57 5 6 145 9 172 9.63e-48 162
Msa0619370 AT3G10480.2 47.399 173 79 3 3 163 23 195 1.04e-47 164
Msa0619370 AT5G66300.1 48.734 158 69 3 4 149 9 166 1.15e-47 160
Msa0619370 AT5G46590.2 54.015 137 59 2 3 135 2 138 3.19e-47 159
Msa0619370 AT4G35580.3 50.282 177 70 5 7 171 9 179 3.40e-47 165
Msa0619370 AT4G35580.2 50.282 177 70 5 7 171 9 179 3.60e-47 165
Msa0619370 AT4G35580.1 50.282 177 70 5 7 171 9 179 3.79e-47 164
Msa0619370 AT1G32510.1 45.745 188 81 4 1 168 1 187 4.04e-47 159
Msa0619370 AT3G10490.1 47.399 173 78 4 4 163 24 196 6.08e-47 157
Msa0619370 AT3G10480.1 46.552 174 80 3 3 163 23 196 1.20e-46 162
Msa0619370 AT2G46770.1 44.186 172 70 4 1 146 10 181 4.57e-46 158
Msa0619370 AT1G33060.1 44.776 201 91 6 7 195 24 216 4.92e-46 164
Msa0619370 AT1G33060.2 44.776 201 91 6 7 195 24 216 5.11e-46 164
Msa0619370 AT3G10490.2 47.399 173 78 4 4 163 24 196 2.01e-45 159
Msa0619370 AT3G49530.2 46.512 172 77 4 7 164 13 183 4.11e-45 157
Msa0619370 AT1G32770.1 43.529 170 73 3 1 147 10 179 6.77e-45 155
Msa0619370 AT3G49530.1 46.512 172 77 4 7 164 13 183 1.17e-44 157
Msa0619370 AT3G61910.1 39.286 196 87 5 1 164 5 200 2.09e-44 153
Msa0619370 AT5G24590.2 49.673 153 64 3 7 146 13 165 5.83e-44 155
Msa0619370 AT3G10500.1 49.673 153 65 3 7 147 9 161 9.19e-44 156
Msa0619370 AT2G17040.1 48.966 145 66 3 9 145 8 152 1.32e-43 149
Msa0619370 AT3G12910.1 46.629 178 66 6 2 152 17 192 1.76e-43 150
Msa0619370 AT5G04410.1 49.020 153 66 3 7 147 9 161 3.51e-43 155
Msa0619370 AT3G10480.3 40.097 207 78 3 3 163 23 229 9.68e-43 153
Msa0619370 AT1G34180.3 44.910 167 80 4 9 163 18 184 2.12e-42 150
Msa0619370 AT1G34180.1 44.910 167 80 4 9 163 18 184 1.04e-41 150
Msa0619370 AT2G27300.1 48.571 140 68 3 7 142 14 153 2.31e-40 143
Msa0619370 AT3G44290.2 46.377 138 70 3 9 142 16 153 2.65e-40 139
Msa0619370 AT1G34190.1 44.311 167 81 4 9 163 18 184 3.75e-40 146
Msa0619370 AT1G34180.4 42.458 179 79 4 9 163 18 196 4.06e-40 145
Msa0619370 AT5G09330.5 44.586 157 75 3 3 147 2 158 7.55e-40 144
Msa0619370 AT5G09330.2 44.586 157 75 3 3 147 2 158 7.55e-40 144
Msa0619370 AT5G09330.4 44.586 157 75 3 3 147 2 158 7.55e-40 144
Msa0619370 AT5G09330.3 44.586 157 75 3 3 147 2 158 7.55e-40 144
Msa0619370 AT5G09330.1 44.586 157 75 3 3 147 2 158 7.55e-40 144
Msa0619370 AT1G34180.2 42.458 179 79 4 9 163 18 196 1.52e-39 145
Msa0619370 AT3G44290.1 46.377 138 70 3 9 142 16 153 2.33e-39 140
Msa0619370 AT5G22290.1 45.455 143 73 4 9 146 23 165 4.79e-39 139
Msa0619370 AT5G64060.1 40.462 173 91 3 3 163 2 174 1.19e-38 139
Msa0619370 AT1G32870.2 50.968 155 60 4 7 147 10 162 2.50e-37 138
Msa0619370 AT1G32870.1 50.968 155 60 4 7 147 10 162 3.01e-37 138
Msa0619370 AT1G32870.3 50.968 155 60 4 7 147 46 198 4.61e-37 138
Msa0619370 AT5G61430.2 59.048 105 31 3 55 147 1 105 2.50e-34 125
Msa0619370 AT1G56010.1 47.581 124 52 2 55 165 1 124 2.27e-32 120
Msa0619370 AT5G04395.1 40.523 153 74 3 6 141 27 179 4.22e-32 117
Msa0619370 AT2G33480.3 56.701 97 32 2 60 146 8 104 4.43e-32 118
Msa0619370 AT3G44350.2 32.381 210 110 7 6 188 4 208 6.25e-32 118
Msa0619370 AT5G22380.1 32.794 247 120 9 4 224 2 228 1.02e-31 117
Msa0619370 AT4G10350.2 51.786 112 44 2 60 161 18 129 1.15e-31 119
Msa0619370 AT5G64530.1 37.500 176 72 4 5 154 1 164 1.87e-31 115
Msa0619370 AT3G12977.2 50.476 105 41 2 52 145 10 114 3.10e-31 116
Msa0619370 AT4G28530.2 40.764 157 46 3 6 145 9 135 3.81e-31 118
Msa0619370 AT5G64530.2 45.385 130 56 3 5 131 1 118 3.51e-30 111
Msa0619370 AT3G44350.1 42.336 137 62 5 6 130 4 135 6.39e-30 110
Msa0619370 AT4G01550.1 38.776 147 79 4 10 145 7 153 7.00e-28 111
Msa0619370 AT4G01520.1 38.776 147 78 5 8 142 5 151 7.81e-27 106
Msa0619370 AT4G01540.4 39.310 145 76 5 10 142 7 151 1.05e-25 105
Msa0619370 AT4G01540.3 39.310 145 76 5 10 142 7 151 1.42e-25 105
Msa0619370 AT4G01540.2 39.310 145 76 5 10 142 7 151 1.46e-25 105
Msa0619370 AT4G01540.1 39.310 145 76 5 10 142 7 151 1.77e-25 105
Msa0619370 AT3G04420.2 33.684 190 100 6 5 168 1 190 1.36e-24 100
Msa0619370 AT3G04420.1 33.684 190 100 6 5 168 1 190 2.51e-24 100
Msa0619370 AT1G02230.1 37.037 135 74 4 8 134 4 135 3.65e-23 97.4
Msa0619370 AT5G14000.1 35.256 156 90 4 1 147 9 162 5.85e-22 91.3
Msa0619370 AT2G43000.2 47.727 88 35 2 69 145 2 89 3.94e-21 89.0
Msa0619370 AT1G02250.1 35.135 148 80 5 8 142 4 148 2.02e-20 89.7
Msa0619370 AT5G14000.2 37.226 137 81 3 1 134 9 143 4.23e-20 85.1
Msa0619370 AT3G56530.1 35.099 151 81 5 7 143 52 199 7.47e-20 87.8
Msa0619370 AT1G02220.1 33.974 156 91 5 5 151 1 153 1.22e-19 88.2
Msa0619370 AT1G01010.1 33.974 156 82 6 5 142 1 153 1.53e-18 85.1
Msa0619370 AT3G10490.4 45.263 95 41 3 80 163 2 96 2.75e-18 84.0
Msa0619370 AT3G10490.3 45.263 95 41 3 80 163 2 96 2.75e-18 84.0
Msa0619370 AT2G18060.2 47.887 71 29 2 85 147 2 72 7.47e-16 75.9
Msa0619370 AT3G55210.1 32.298 161 87 6 4 143 8 167 8.81e-16 75.9
Msa0619370 AT5G50820.1 33.577 137 74 6 4 133 14 140 1.33e-13 68.2
Msa0619370 AT5G22290.2 47.692 65 30 3 86 146 2 66 2.32e-12 65.5
Msa0619370 AT1G28470.1 29.932 147 85 6 7 136 77 222 2.04e-11 63.5
Msa0619370 AT4G29230.1 32.484 157 76 8 7 136 48 201 2.37e-11 63.9
Msa0619370 AT4G29230.2 32.484 157 76 8 7 136 47 200 2.50e-11 63.9
Msa0619370 AT4G29230.3 32.484 157 76 8 7 136 48 201 3.81e-11 63.5
Msa0619370 AT3G04430.1 33.582 134 70 6 13 130 6 136 4.52e-11 61.2
Msa0619370 AT1G25580.1 30.769 156 85 6 7 143 58 209 4.75e-11 63.2
Msa0619370 AT3G56520.1 31.515 165 83 8 7 150 8 163 7.51e-11 60.1

Find 121 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTAGGGTTTGTTGAATT+TGG 0.180719 4_2:+70489217 Msa0619370:three_prime_UTR
ATCCAATTAGGCATGTTATT+AGG 0.202654 4_2:+70489347 Msa0619370:three_prime_UTR
AAATCAATTTCTTTGATAAT+AGG 0.219498 4_2:-70488022 None:intergenic
TCCAATTAGGCATGTTATTA+GGG 0.225184 4_2:+70489348 Msa0619370:three_prime_UTR
AATGACCATTTGGGAGGATT+AGG 0.250459 4_2:+70489054 Msa0619370:three_prime_UTR
TGAAAATCAAAGGCTGAAAC+TGG 0.273975 4_2:-70488860 None:intergenic
CCCCTAATAACATGCCTAAT+TGG 0.277744 4_2:-70489349 None:intergenic
GGGCTGCGGGAACCGGATAT+TGG 0.287906 4_2:+70488258 Msa0619370:CDS
TACTAGGGTTTGTTGAATTT+GGG 0.300795 4_2:+70489218 Msa0619370:three_prime_UTR
GAAAATTGAAAATGACCATT+TGG 0.304176 4_2:+70489044 Msa0619370:three_prime_UTR
GGCATGTTATTAGGGGTATA+TGG 0.340002 4_2:+70489356 Msa0619370:three_prime_UTR
TTCTTTATCCCAAGTGCCTT+CGG 0.348007 4_2:-70488314 None:intergenic
TTTACAGAAATGGCTCTTTA+CGG 0.351320 4_2:+70488170 Msa0619370:intron
TTTGATCCATGGCATCTTCC+AGG 0.357407 4_2:+70488052 Msa0619370:CDS
AATAACAAATTAAATTTACT+TGG 0.360188 4_2:-70488984 None:intergenic
AACCCGAAAATTGATTCATT+TGG 0.363530 4_2:-70488937 None:intergenic
AAAATTGAAAATGACCATTT+GGG 0.367814 4_2:+70489045 Msa0619370:three_prime_UTR
AAGTGGAATGAATTTGTATT+GGG 0.373773 4_2:+70488830 Msa0619370:CDS
TAATGGTGCATGTCTGATCT+TGG 0.383752 4_2:+70489186 Msa0619370:three_prime_UTR
ATTAATTGCAGCTTGATGAT+TGG 0.388930 4_2:+70488555 Msa0619370:intron
TTGATAATAGGAACAGCTAC+AGG 0.390807 4_2:-70488010 None:intergenic
CCGAACCGGGCTGCGGGAAC+CGG 0.391909 4_2:+70488251 Msa0619370:CDS
AGTGTTACTGTTAACATGTA+AGG 0.392554 4_2:+70489384 Msa0619370:three_prime_UTR
AGGATTAGGGATCCTAAAAT+TGG 0.395578 4_2:+70489068 Msa0619370:three_prime_UTR
ATGACCATTTGGGAGGATTA+GGG 0.396512 4_2:+70489055 Msa0619370:three_prime_UTR
CCAAAGGAATTAAAACCAAT+TGG 0.402035 4_2:+70488366 Msa0619370:CDS
CGGTTCGGCCTTGAACCGTT+TGG 0.403070 4_2:-70488236 None:intergenic
CCGGTTCCCGCAGCCCGGTT+CGG 0.410215 4_2:-70488251 None:intergenic
TCAAAGGCTGAAACTGGGTC+TGG 0.410879 4_2:-70488854 None:intergenic
TGAGTTCGAAGTTGTGAGAA+AGG 0.411148 4_2:-70487779 None:intergenic
AGTTGCAGTTAGTATTTGTT+TGG 0.411894 4_2:-70489149 None:intergenic
TTAATTGCAGCTTGATGATT+GGG 0.412168 4_2:+70488556 Msa0619370:intron
CAAGTGGAATGAATTTGTAT+TGG 0.415048 4_2:+70488829 Msa0619370:CDS
AGTGTTGGTTGGTGGCTGCT+AGG 0.418122 4_2:-70487830 None:intergenic
TGGTTGAAATTTAAGAAAAG+TGG 0.419169 4_2:+70489264 Msa0619370:three_prime_UTR
TCTTCTTCTTCAGTGTTGGT+TGG 0.420782 4_2:-70487841 None:intergenic
GTAAATATCCAAACGGTTCA+AGG 0.423042 4_2:+70488228 Msa0619370:CDS
TGTCGAATTTACAACAAGAA+AGG 0.430099 4_2:+70488584 Msa0619370:CDS
ATCTTGGGTAGGTGATTACT+AGG 0.434038 4_2:+70489202 Msa0619370:three_prime_UTR
TACTGATCCTGAGGGGCAAA+AGG 0.435530 4_2:-70488914 None:intergenic
CAAATTAAATTTACTTGGGC+AGG 0.439187 4_2:-70488979 None:intergenic
CAAACGGTTCAAGGCCGAAC+CGG 0.440323 4_2:+70488237 Msa0619370:CDS
TTCAAGGCCGAACCGGGCTG+CGG 0.445265 4_2:+70488244 Msa0619370:CDS
CAATACAAATTCATTCCACT+TGG 0.450741 4_2:-70488828 None:intergenic
AATAGAAATAGGTCATGGTC+TGG 0.452417 4_2:+70489016 Msa0619370:three_prime_UTR
AATGGTGCATGTCTGATCTT+GGG 0.455923 4_2:+70489187 Msa0619370:three_prime_UTR
ATAGAAATAGGTCATGGTCT+GGG 0.460816 4_2:+70489017 Msa0619370:three_prime_UTR
GCAGTTAGTATTTGTTTGGT+AGG 0.465487 4_2:-70489145 None:intergenic
TCTTCTTCAGTGTTGGTTGG+TGG 0.470870 4_2:-70487838 None:intergenic
GGTTGAAATTTAAGAAAAGT+GGG 0.472430 4_2:+70489265 Msa0619370:three_prime_UTR
TTTGGATATTTACGATCCCT+TGG 0.476106 4_2:-70488218 None:intergenic
TCCGGTCGCCTTCCAATATC+CGG 0.478603 4_2:-70488270 None:intergenic
CCTAAAATTGGAGGGTCCCA+TGG 0.480588 4_2:+70489080 Msa0619370:three_prime_UTR
TCAAGGCCGAACCGGGCTGC+GGG 0.480914 4_2:+70488245 Msa0619370:CDS
TCCAATCGGCTTATCAGCTC+CGG 0.481369 4_2:-70488288 None:intergenic
CGTGGTTTCACCGTGCGATA+AGG 0.482787 4_2:+70488790 Msa0619370:CDS
CAGTTGAATCTTATGGATGA+TGG 0.485236 4_2:+70488881 Msa0619370:CDS
ATACTCATGCATGATCCAAT+TGG 0.485541 4_2:-70488381 None:intergenic
CAAAGGCTGAAACTGGGTCT+GGG 0.487541 4_2:-70488853 None:intergenic
ATTGGAAAGCCGAAGGCACT+TGG 0.488594 4_2:+70488305 Msa0619370:CDS
GTCGAATTTACAACAAGAAA+GGG 0.491222 4_2:+70488585 Msa0619370:CDS
TGTGAGAAAGGAAGAAGTTG+TGG 0.504684 4_2:-70487767 None:intergenic
GTGTTGGTTGGTGGCTGCTA+GGG 0.507815 4_2:-70487829 None:intergenic
ACTGCAAGTGGAGCTTCTAA+TGG 0.512363 4_2:+70489169 Msa0619370:three_prime_UTR
TTCATTTGGTACTGATCCTG+AGG 0.513979 4_2:-70488923 None:intergenic
AACTAGGCGAAGATCCAATT+AGG 0.515527 4_2:+70489335 Msa0619370:three_prime_UTR
AATGATCTCGATTCTCAACT+AGG 0.517949 4_2:+70489319 Msa0619370:three_prime_UTR
AATATCCGGTTCCCGCAGCC+CGG 0.524402 4_2:-70488256 None:intergenic
AGTGCCTTCGGCTTTCCAAT+CGG 0.524558 4_2:-70488302 None:intergenic
ATTTGTATAAGTTTGATCCA+TGG 0.528456 4_2:+70488041 Msa0619370:CDS
AAACGGTTCAAGGCCGAACC+GGG 0.528831 4_2:+70488238 Msa0619370:CDS
ATACTAACTGCAACTGCAAG+TGG 0.529536 4_2:+70489157 Msa0619370:three_prime_UTR
GCTGCTAGGGTAGTTAGTAT+TGG 0.532321 4_2:-70487816 None:intergenic
TCAGATCAAGATGAACGGCC+AGG 0.532358 4_2:+70488682 Msa0619370:CDS
GTCGGGTGAAATCTGAAGCC+AGG 0.534952 4_2:-70487938 None:intergenic
GTACACTGACACATCAGATT+CGG 0.536856 4_2:+70488730 Msa0619370:CDS
CACTGTTCCTAAAATCATCC+TGG 0.536982 4_2:-70488700 None:intergenic
TGGCCGTTCATCTTGATCTG+AGG 0.540560 4_2:-70488680 None:intergenic
ACCGGATATTGGAAGGCGAC+CGG 0.540712 4_2:+70488269 Msa0619370:CDS
TCTTGGGTAGGTGATTACTA+GGG 0.549155 4_2:+70489203 Msa0619370:three_prime_UTR
GGATCCCTAATCCTCCCAAA+TGG 0.552239 4_2:-70489059 None:intergenic
TGCGGGAACCGGATATTGGA+AGG 0.555135 4_2:+70488262 Msa0619370:CDS
ATAACAAATTAAATTTACTT+GGG 0.555352 4_2:-70488983 None:intergenic
TGACAAGCTCATCATCAGTC+GGG 0.555923 4_2:-70487955 None:intergenic
ACCGGAGCTGATAAGCCGAT+TGG 0.556049 4_2:+70488287 Msa0619370:CDS
ACTGATCCTGAGGGGCAAAA+GGG 0.560321 4_2:-70488913 None:intergenic
CTCTTTACGGTGAGAAAGAG+TGG 0.566657 4_2:+70488183 Msa0619370:CDS
AAGATTCAACTGAAAATCAA+AGG 0.566776 4_2:-70488870 None:intergenic
CTCAAGCGGTTCTGAGCACG+TGG 0.568997 4_2:+70488772 Msa0619370:CDS
ATTAGGGATCCTAAAATTGG+AGG 0.571106 4_2:+70489071 Msa0619370:three_prime_UTR
TGAGCTTCCTCAGAAAACAT+TGG 0.577453 4_2:-70488638 None:intergenic
ATTGAATATACGCGAATGCA+AGG 0.577743 4_2:+70487899 Msa0619370:exon
TAAGTACCTGGAAGATGCCA+TGG 0.577977 4_2:-70488058 None:intergenic
ATTGAAAATGACCATTTGGG+AGG 0.580131 4_2:+70489048 Msa0619370:three_prime_UTR
CTTTGAACTTCCTTATCGCA+CGG 0.587532 4_2:-70488800 None:intergenic
AGGGATCGTAAATATCCAAA+CGG 0.593976 4_2:+70488221 Msa0619370:CDS
TTGACAAGCTCATCATCAGT+CGG 0.594991 4_2:-70487956 None:intergenic
GAAAATCAAAGGCTGAAACT+GGG 0.599958 4_2:-70488859 None:intergenic
AATACAAATTCATTCCACTT+GGG 0.602517 4_2:-70488827 None:intergenic
ACACATCAGATTCGGTGCCA+CGG 0.603238 4_2:+70488738 Msa0619370:CDS
TCATTTGGTACTGATCCTGA+GGG 0.603683 4_2:-70488922 None:intergenic
GTTGAAATTTAAGAAAAGTG+GGG 0.606864 4_2:+70489266 Msa0619370:three_prime_UTR
TAGAAATAGGTCATGGTCTG+GGG 0.608175 4_2:+70489018 Msa0619370:three_prime_UTR
AAGTTCAAAGTGAGCCCAAG+TGG 0.609329 4_2:+70488813 Msa0619370:CDS
TTGGAAAGCCGAAGGCACTT+GGG 0.610579 4_2:+70488306 Msa0619370:CDS
CGGTTTCACACCGACTCAAG+CGG 0.614416 4_2:+70488758 Msa0619370:CDS
TTAGGGATCCTAAAATTGGA+GGG 0.619634 4_2:+70489072 Msa0619370:three_prime_UTR
TTAGTAATAGAAATAGGTCA+TGG 0.629502 4_2:+70489011 Msa0619370:three_prime_UTR
GTGCTCAGAACCGCTTGAGT+CGG 0.630980 4_2:-70488768 None:intergenic
AATAGGAACAGCTACAGGGA+GGG 0.637721 4_2:-70488005 None:intergenic
CTTGAGTCGGTGTGAAACCG+TGG 0.640274 4_2:-70488755 None:intergenic
GGAGCATTAGAATTACCACC+TGG 0.643311 4_2:+70487920 Msa0619370:CDS
CCAATTAGGCATGTTATTAG+GGG 0.644452 4_2:+70489349 Msa0619370:three_prime_UTR
TATGCTGGCAAAGCTCCCAA+AGG 0.653423 4_2:+70488350 Msa0619370:CDS
AAACCTCAGATCAAGATGAA+CGG 0.656051 4_2:+70488677 Msa0619370:CDS
TGATAATAGGAACAGCTACA+GGG 0.657698 4_2:-70488009 None:intergenic
GTGCATGTCTGATCTTGGGT+AGG 0.661579 4_2:+70489191 Msa0619370:three_prime_UTR
TAAGCCGATTGGAAAGCCGA+AGG 0.696583 4_2:+70488298 Msa0619370:CDS
TAATAGGAACAGCTACAGGG+AGG 0.713279 4_2:-70488006 None:intergenic
GGGTGAAATCTGAAGCCAGG+TGG 0.722817 4_2:-70487935 None:intergenic
CATTTGGTACTGATCCTGAG+GGG 0.747553 4_2:-70488921 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAATTAAATTTACTT+GGG - chr4_2:70488986-70489005 None:intergenic 10.0%
!! AATAACAAATTAAATTTACT+TGG - chr4_2:70488987-70489006 None:intergenic 10.0%
!! ATAACAAATTAAATTTACTT+GGG - chr4_2:70488986-70489005 None:intergenic 10.0%
!! AATAACAAATTAAATTTACT+TGG - chr4_2:70488987-70489006 None:intergenic 10.0%
!!! AAATCAATTTCTTTGATAAT+AGG - chr4_2:70488025-70488044 None:intergenic 15.0%
!!! ATATTTTAATGCTAATTATG+TGG + chr4_2:70488134-70488153 Msa0619370:intron 15.0%
!!! ATATTGATTTTTCATTAGTA+TGG + chr4_2:70489244-70489263 Msa0619370:three_prime_UTR 15.0%
!!! AAATCAATTTCTTTGATAAT+AGG - chr4_2:70488025-70488044 None:intergenic 15.0%
!!! ATATTTTAATGCTAATTATG+TGG + chr4_2:70488134-70488153 Msa0619370:intron 15.0%
!!! ATATTGATTTTTCATTAGTA+TGG + chr4_2:70489244-70489263 Msa0619370:three_prime_UTR 15.0%
!! CACAAGAAATAAAATTGATT+TGG - chr4_2:70488472-70488491 None:intergenic 20.0%
!!! TTTTCGTTAGTAATAGAAAT+AGG + chr4_2:70489005-70489024 Msa0619370:three_prime_UTR 20.0%
!! AAAATTGAAAATGACCATTT+GGG + chr4_2:70489045-70489064 Msa0619370:three_prime_UTR 20.0%
!! AACCAATTTAAAAAATCCAT+GGG - chr4_2:70489099-70489118 None:intergenic 20.0%
!! CACAAGAAATAAAATTGATT+TGG - chr4_2:70488472-70488491 None:intergenic 20.0%
!!! TTTTCGTTAGTAATAGAAAT+AGG + chr4_2:70489005-70489024 Msa0619370:three_prime_UTR 20.0%
!! AAAATTGAAAATGACCATTT+GGG + chr4_2:70489045-70489064 Msa0619370:three_prime_UTR 20.0%
!! AACCAATTTAAAAAATCCAT+GGG - chr4_2:70489099-70489118 None:intergenic 20.0%
! ATTTGTATAAGTTTGATCCA+TGG + chr4_2:70488041-70488060 Msa0619370:CDS 25.0%
! GTTGTATGTATTTACAGAAA+TGG + chr4_2:70488160-70488179 Msa0619370:intron 25.0%
!!! CAATTGGTTTTAATTCCTTT+GGG - chr4_2:70488368-70488387 None:intergenic 25.0%
!!! ATTGTGGTTATTTTTTGAAG+CGG - chr4_2:70488429-70488448 None:intergenic 25.0%
! ATGTACATACTCTTAAATTG+TGG - chr4_2:70488445-70488464 None:intergenic 25.0%
! AATACAAATTCATTCCACTT+GGG - chr4_2:70488830-70488849 None:intergenic 25.0%
! AAGTGGAATGAATTTGTATT+GGG + chr4_2:70488830-70488849 Msa0619370:CDS 25.0%
! AAGATTCAACTGAAAATCAA+AGG - chr4_2:70488873-70488892 None:intergenic 25.0%
!! TGATTTTCAGTTGAATCTTA+TGG + chr4_2:70488874-70488893 Msa0619370:CDS 25.0%
!! GTACCAAATGAATCAATTTT+CGG + chr4_2:70488934-70488953 Msa0619370:CDS 25.0%
!! TACCAAATGAATCAATTTTC+GGG + chr4_2:70488935-70488954 Msa0619370:CDS 25.0%
! TTAGTAATAGAAATAGGTCA+TGG + chr4_2:70489011-70489030 Msa0619370:three_prime_UTR 25.0%
! GAAAATTGAAAATGACCATT+TGG + chr4_2:70489044-70489063 Msa0619370:three_prime_UTR 25.0%
! CAACCAATTTAAAAAATCCA+TGG - chr4_2:70489100-70489119 None:intergenic 25.0%
! TGGTTGAAATTTAAGAAAAG+TGG + chr4_2:70489264-70489283 Msa0619370:three_prime_UTR 25.0%
! GGTTGAAATTTAAGAAAAGT+GGG + chr4_2:70489265-70489284 Msa0619370:three_prime_UTR 25.0%
! GTTGAAATTTAAGAAAAGTG+GGG + chr4_2:70489266-70489285 Msa0619370:three_prime_UTR 25.0%
! ATTTGTATAAGTTTGATCCA+TGG + chr4_2:70488041-70488060 Msa0619370:CDS 25.0%
! GTTGTATGTATTTACAGAAA+TGG + chr4_2:70488160-70488179 Msa0619370:intron 25.0%
!!! CAATTGGTTTTAATTCCTTT+GGG - chr4_2:70488368-70488387 None:intergenic 25.0%
!!! ATTGTGGTTATTTTTTGAAG+CGG - chr4_2:70488429-70488448 None:intergenic 25.0%
! ATGTACATACTCTTAAATTG+TGG - chr4_2:70488445-70488464 None:intergenic 25.0%
! AATACAAATTCATTCCACTT+GGG - chr4_2:70488830-70488849 None:intergenic 25.0%
! AAGTGGAATGAATTTGTATT+GGG + chr4_2:70488830-70488849 Msa0619370:CDS 25.0%
! AAGATTCAACTGAAAATCAA+AGG - chr4_2:70488873-70488892 None:intergenic 25.0%
!! TGATTTTCAGTTGAATCTTA+TGG + chr4_2:70488874-70488893 Msa0619370:CDS 25.0%
!! GTACCAAATGAATCAATTTT+CGG + chr4_2:70488934-70488953 Msa0619370:CDS 25.0%
!! TACCAAATGAATCAATTTTC+GGG + chr4_2:70488935-70488954 Msa0619370:CDS 25.0%
! TTAGTAATAGAAATAGGTCA+TGG + chr4_2:70489011-70489030 Msa0619370:three_prime_UTR 25.0%
! GAAAATTGAAAATGACCATT+TGG + chr4_2:70489044-70489063 Msa0619370:three_prime_UTR 25.0%
! CAACCAATTTAAAAAATCCA+TGG - chr4_2:70489100-70489119 None:intergenic 25.0%
! TGGTTGAAATTTAAGAAAAG+TGG + chr4_2:70489264-70489283 Msa0619370:three_prime_UTR 25.0%
! GGTTGAAATTTAAGAAAAGT+GGG + chr4_2:70489265-70489284 Msa0619370:three_prime_UTR 25.0%
! GTTGAAATTTAAGAAAAGTG+GGG + chr4_2:70489266-70489285 Msa0619370:three_prime_UTR 25.0%
!!! AAGAAGTTGTGGTTTTATAG+GGG - chr4_2:70487759-70487778 None:intergenic 30.0%
!!! GAAGAAGTTGTGGTTTTATA+GGG - chr4_2:70487760-70487779 None:intergenic 30.0%
! TTTTTCTTCTTCTTCAGTGT+TGG - chr4_2:70487848-70487867 None:intergenic 30.0%
GAAAATAAAGAGTAAGTACC+TGG - chr4_2:70488073-70488092 None:intergenic 30.0%
TTTACAGAAATGGCTCTTTA+CGG + chr4_2:70488170-70488189 Msa0619370:intron 30.0%
!!! CCAATTGGTTTTAATTCCTT+TGG - chr4_2:70488369-70488388 None:intergenic 30.0%
CCAAAGGAATTAAAACCAAT+TGG + chr4_2:70488366-70488385 Msa0619370:CDS 30.0%
! ATTAATTGCAGCTTGATGAT+TGG + chr4_2:70488555-70488574 Msa0619370:intron 30.0%
! TTAATTGCAGCTTGATGATT+GGG + chr4_2:70488556-70488575 Msa0619370:intron 30.0%
TGTCGAATTTACAACAAGAA+AGG + chr4_2:70488584-70488603 Msa0619370:CDS 30.0%
GTCGAATTTACAACAAGAAA+GGG + chr4_2:70488585-70488604 Msa0619370:CDS 30.0%
! TAAATCACCAATGTTTTCTG+AGG + chr4_2:70488631-70488650 Msa0619370:CDS 30.0%
CAATACAAATTCATTCCACT+TGG - chr4_2:70488831-70488850 None:intergenic 30.0%
CAAGTGGAATGAATTTGTAT+TGG + chr4_2:70488829-70488848 Msa0619370:CDS 30.0%
! AACCCGAAAATTGATTCATT+TGG - chr4_2:70488940-70488959 None:intergenic 30.0%
!!! AAATGAATCAATTTTCGGGT+TGG + chr4_2:70488939-70488958 Msa0619370:CDS 30.0%
CAAATTAAATTTACTTGGGC+AGG - chr4_2:70488982-70489001 None:intergenic 30.0%
!!! GTCCCATGGATTTTTTAAAT+TGG + chr4_2:70489094-70489113 Msa0619370:three_prime_UTR 30.0%
AGTTGCAGTTAGTATTTGTT+TGG - chr4_2:70489152-70489171 None:intergenic 30.0%
!! TTACTAGGGTTTGTTGAATT+TGG + chr4_2:70489217-70489236 Msa0619370:three_prime_UTR 30.0%
!! TACTAGGGTTTGTTGAATTT+GGG + chr4_2:70489218-70489237 Msa0619370:three_prime_UTR 30.0%
ATCCAATTAGGCATGTTATT+AGG + chr4_2:70489347-70489366 Msa0619370:three_prime_UTR 30.0%
TCCAATTAGGCATGTTATTA+GGG + chr4_2:70489348-70489367 Msa0619370:three_prime_UTR 30.0%
! AGTGTTACTGTTAACATGTA+AGG + chr4_2:70489384-70489403 Msa0619370:three_prime_UTR 30.0%
!!! AAGAAGTTGTGGTTTTATAG+GGG - chr4_2:70487759-70487778 None:intergenic 30.0%
!!! GAAGAAGTTGTGGTTTTATA+GGG - chr4_2:70487760-70487779 None:intergenic 30.0%
! TTTTTCTTCTTCTTCAGTGT+TGG - chr4_2:70487848-70487867 None:intergenic 30.0%
GAAAATAAAGAGTAAGTACC+TGG - chr4_2:70488073-70488092 None:intergenic 30.0%
TTTACAGAAATGGCTCTTTA+CGG + chr4_2:70488170-70488189 Msa0619370:intron 30.0%
!!! CCAATTGGTTTTAATTCCTT+TGG - chr4_2:70488369-70488388 None:intergenic 30.0%
CCAAAGGAATTAAAACCAAT+TGG + chr4_2:70488366-70488385 Msa0619370:CDS 30.0%
! ATTAATTGCAGCTTGATGAT+TGG + chr4_2:70488555-70488574 Msa0619370:intron 30.0%
! TTAATTGCAGCTTGATGATT+GGG + chr4_2:70488556-70488575 Msa0619370:intron 30.0%
TGTCGAATTTACAACAAGAA+AGG + chr4_2:70488584-70488603 Msa0619370:CDS 30.0%
GTCGAATTTACAACAAGAAA+GGG + chr4_2:70488585-70488604 Msa0619370:CDS 30.0%
! TAAATCACCAATGTTTTCTG+AGG + chr4_2:70488631-70488650 Msa0619370:CDS 30.0%
CAATACAAATTCATTCCACT+TGG - chr4_2:70488831-70488850 None:intergenic 30.0%
CAAGTGGAATGAATTTGTAT+TGG + chr4_2:70488829-70488848 Msa0619370:CDS 30.0%
! AACCCGAAAATTGATTCATT+TGG - chr4_2:70488940-70488959 None:intergenic 30.0%
!!! AAATGAATCAATTTTCGGGT+TGG + chr4_2:70488939-70488958 Msa0619370:CDS 30.0%
CAAATTAAATTTACTTGGGC+AGG - chr4_2:70488982-70489001 None:intergenic 30.0%
!!! GTCCCATGGATTTTTTAAAT+TGG + chr4_2:70489094-70489113 Msa0619370:three_prime_UTR 30.0%
AGTTGCAGTTAGTATTTGTT+TGG - chr4_2:70489152-70489171 None:intergenic 30.0%
!! TTACTAGGGTTTGTTGAATT+TGG + chr4_2:70489217-70489236 Msa0619370:three_prime_UTR 30.0%
!! TACTAGGGTTTGTTGAATTT+GGG + chr4_2:70489218-70489237 Msa0619370:three_prime_UTR 30.0%
ATCCAATTAGGCATGTTATT+AGG + chr4_2:70489347-70489366 Msa0619370:three_prime_UTR 30.0%
TCCAATTAGGCATGTTATTA+GGG + chr4_2:70489348-70489367 Msa0619370:three_prime_UTR 30.0%
! AGTGTTACTGTTAACATGTA+AGG + chr4_2:70489384-70489403 Msa0619370:three_prime_UTR 30.0%
!!! GGAAGAAGTTGTGGTTTTAT+AGG - chr4_2:70487761-70487780 None:intergenic 35.0%
ATTGAATATACGCGAATGCA+AGG + chr4_2:70487899-70487918 Msa0619370:exon 35.0%
TGATAATAGGAACAGCTACA+GGG - chr4_2:70488012-70488031 None:intergenic 35.0%
! TTGATAATAGGAACAGCTAC+AGG - chr4_2:70488013-70488032 None:intergenic 35.0%
AACATACACTTCTGATCTGA+TGG + chr4_2:70488099-70488118 Msa0619370:intron 35.0%
!!! AGTGGTATTTTTTCTCTCCA+AGG + chr4_2:70488201-70488220 Msa0619370:CDS 35.0%
!!! GTGGTATTTTTTCTCTCCAA+GGG + chr4_2:70488202-70488221 Msa0619370:CDS 35.0%
TTTGGATATTTACGATCCCT+TGG - chr4_2:70488221-70488240 None:intergenic 35.0%
AGGGATCGTAAATATCCAAA+CGG + chr4_2:70488221-70488240 Msa0619370:CDS 35.0%
GTAAATATCCAAACGGTTCA+AGG + chr4_2:70488228-70488247 Msa0619370:CDS 35.0%
ATACTCATGCATGATCCAAT+TGG - chr4_2:70488384-70488403 None:intergenic 35.0%
AAACCTCAGATCAAGATGAA+CGG + chr4_2:70488677-70488696 Msa0619370:CDS 35.0%
GAAAATCAAAGGCTGAAACT+GGG - chr4_2:70488862-70488881 None:intergenic 35.0%
TGAAAATCAAAGGCTGAAAC+TGG - chr4_2:70488863-70488882 None:intergenic 35.0%
CAGTTGAATCTTATGGATGA+TGG + chr4_2:70488881-70488900 Msa0619370:CDS 35.0%
AATAGAAATAGGTCATGGTC+TGG + chr4_2:70489016-70489035 Msa0619370:three_prime_UTR 35.0%
ATAGAAATAGGTCATGGTCT+GGG + chr4_2:70489017-70489036 Msa0619370:three_prime_UTR 35.0%
ATTGAAAATGACCATTTGGG+AGG + chr4_2:70489048-70489067 Msa0619370:three_prime_UTR 35.0%
AGGATTAGGGATCCTAAAAT+TGG + chr4_2:70489068-70489087 Msa0619370:three_prime_UTR 35.0%
ATTAGGGATCCTAAAATTGG+AGG + chr4_2:70489071-70489090 Msa0619370:three_prime_UTR 35.0%
TTAGGGATCCTAAAATTGGA+GGG + chr4_2:70489072-70489091 Msa0619370:three_prime_UTR 35.0%
GCAGTTAGTATTTGTTTGGT+AGG - chr4_2:70489148-70489167 None:intergenic 35.0%
AATGATCTCGATTCTCAACT+AGG + chr4_2:70489319-70489338 Msa0619370:three_prime_UTR 35.0%
CCAATTAGGCATGTTATTAG+GGG + chr4_2:70489349-70489368 Msa0619370:three_prime_UTR 35.0%
!!! GGAAGAAGTTGTGGTTTTAT+AGG - chr4_2:70487761-70487780 None:intergenic 35.0%
ATTGAATATACGCGAATGCA+AGG + chr4_2:70487899-70487918 Msa0619370:exon 35.0%
TGATAATAGGAACAGCTACA+GGG - chr4_2:70488012-70488031 None:intergenic 35.0%
! TTGATAATAGGAACAGCTAC+AGG - chr4_2:70488013-70488032 None:intergenic 35.0%
AACATACACTTCTGATCTGA+TGG + chr4_2:70488099-70488118 Msa0619370:intron 35.0%
!!! AGTGGTATTTTTTCTCTCCA+AGG + chr4_2:70488201-70488220 Msa0619370:CDS 35.0%
!!! GTGGTATTTTTTCTCTCCAA+GGG + chr4_2:70488202-70488221 Msa0619370:CDS 35.0%
TTTGGATATTTACGATCCCT+TGG - chr4_2:70488221-70488240 None:intergenic 35.0%
AGGGATCGTAAATATCCAAA+CGG + chr4_2:70488221-70488240 Msa0619370:CDS 35.0%
GTAAATATCCAAACGGTTCA+AGG + chr4_2:70488228-70488247 Msa0619370:CDS 35.0%
ATACTCATGCATGATCCAAT+TGG - chr4_2:70488384-70488403 None:intergenic 35.0%
AAACCTCAGATCAAGATGAA+CGG + chr4_2:70488677-70488696 Msa0619370:CDS 35.0%
GAAAATCAAAGGCTGAAACT+GGG - chr4_2:70488862-70488881 None:intergenic 35.0%
TGAAAATCAAAGGCTGAAAC+TGG - chr4_2:70488863-70488882 None:intergenic 35.0%
CAGTTGAATCTTATGGATGA+TGG + chr4_2:70488881-70488900 Msa0619370:CDS 35.0%
AATAGAAATAGGTCATGGTC+TGG + chr4_2:70489016-70489035 Msa0619370:three_prime_UTR 35.0%
ATAGAAATAGGTCATGGTCT+GGG + chr4_2:70489017-70489036 Msa0619370:three_prime_UTR 35.0%
ATTGAAAATGACCATTTGGG+AGG + chr4_2:70489048-70489067 Msa0619370:three_prime_UTR 35.0%
AGGATTAGGGATCCTAAAAT+TGG + chr4_2:70489068-70489087 Msa0619370:three_prime_UTR 35.0%
ATTAGGGATCCTAAAATTGG+AGG + chr4_2:70489071-70489090 Msa0619370:three_prime_UTR 35.0%
TTAGGGATCCTAAAATTGGA+GGG + chr4_2:70489072-70489091 Msa0619370:three_prime_UTR 35.0%
GCAGTTAGTATTTGTTTGGT+AGG - chr4_2:70489148-70489167 None:intergenic 35.0%
AATGATCTCGATTCTCAACT+AGG + chr4_2:70489319-70489338 Msa0619370:three_prime_UTR 35.0%
CCAATTAGGCATGTTATTAG+GGG + chr4_2:70489349-70489368 Msa0619370:three_prime_UTR 35.0%
!!! GTTGTGGTTTTATAGGGGAT+AGG - chr4_2:70487754-70487773 None:intergenic 40.0%
TGTGAGAAAGGAAGAAGTTG+TGG - chr4_2:70487770-70487789 None:intergenic 40.0%
TGAGTTCGAAGTTGTGAGAA+AGG - chr4_2:70487782-70487801 None:intergenic 40.0%
!! TCTTCTTCTTCAGTGTTGGT+TGG - chr4_2:70487844-70487863 None:intergenic 40.0%
TTGACAAGCTCATCATCAGT+CGG - chr4_2:70487959-70487978 None:intergenic 40.0%
TTCTTTATCCCAAGTGCCTT+CGG - chr4_2:70488317-70488336 None:intergenic 40.0%
!! AAAGCACTCGTTTTCTATGC+TGG + chr4_2:70488335-70488354 Msa0619370:CDS 40.0%
TGAGCTTCCTCAGAAAACAT+TGG - chr4_2:70488641-70488660 None:intergenic 40.0%
CACTGTTCCTAAAATCATCC+TGG - chr4_2:70488703-70488722 None:intergenic 40.0%
GTACACTGACACATCAGATT+CGG + chr4_2:70488730-70488749 Msa0619370:CDS 40.0%
CTTTGAACTTCCTTATCGCA+CGG - chr4_2:70488803-70488822 None:intergenic 40.0%
!! TCATTTGGTACTGATCCTGA+GGG - chr4_2:70488925-70488944 None:intergenic 40.0%
!! TTCATTTGGTACTGATCCTG+AGG - chr4_2:70488926-70488945 None:intergenic 40.0%
TAGAAATAGGTCATGGTCTG+GGG + chr4_2:70489018-70489037 Msa0619370:three_prime_UTR 40.0%
AATGACCATTTGGGAGGATT+AGG + chr4_2:70489054-70489073 Msa0619370:three_prime_UTR 40.0%
ATGACCATTTGGGAGGATTA+GGG + chr4_2:70489055-70489074 Msa0619370:three_prime_UTR 40.0%
ATACTAACTGCAACTGCAAG+TGG + chr4_2:70489157-70489176 Msa0619370:three_prime_UTR 40.0%
TAATGGTGCATGTCTGATCT+TGG + chr4_2:70489186-70489205 Msa0619370:three_prime_UTR 40.0%
AATGGTGCATGTCTGATCTT+GGG + chr4_2:70489187-70489206 Msa0619370:three_prime_UTR 40.0%
ATCTTGGGTAGGTGATTACT+AGG + chr4_2:70489202-70489221 Msa0619370:three_prime_UTR 40.0%
TCTTGGGTAGGTGATTACTA+GGG + chr4_2:70489203-70489222 Msa0619370:three_prime_UTR 40.0%
AACTAGGCGAAGATCCAATT+AGG + chr4_2:70489335-70489354 Msa0619370:three_prime_UTR 40.0%
CCCCTAATAACATGCCTAAT+TGG - chr4_2:70489352-70489371 None:intergenic 40.0%
! GGCATGTTATTAGGGGTATA+TGG + chr4_2:70489356-70489375 Msa0619370:three_prime_UTR 40.0%
!!! GTTGTGGTTTTATAGGGGAT+AGG - chr4_2:70487754-70487773 None:intergenic 40.0%
TGTGAGAAAGGAAGAAGTTG+TGG - chr4_2:70487770-70487789 None:intergenic 40.0%
TGAGTTCGAAGTTGTGAGAA+AGG - chr4_2:70487782-70487801 None:intergenic 40.0%
!! TCTTCTTCTTCAGTGTTGGT+TGG - chr4_2:70487844-70487863 None:intergenic 40.0%
TTGACAAGCTCATCATCAGT+CGG - chr4_2:70487959-70487978 None:intergenic 40.0%
TTCTTTATCCCAAGTGCCTT+CGG - chr4_2:70488317-70488336 None:intergenic 40.0%
!! AAAGCACTCGTTTTCTATGC+TGG + chr4_2:70488335-70488354 Msa0619370:CDS 40.0%
TGAGCTTCCTCAGAAAACAT+TGG - chr4_2:70488641-70488660 None:intergenic 40.0%
CACTGTTCCTAAAATCATCC+TGG - chr4_2:70488703-70488722 None:intergenic 40.0%
GTACACTGACACATCAGATT+CGG + chr4_2:70488730-70488749 Msa0619370:CDS 40.0%
CTTTGAACTTCCTTATCGCA+CGG - chr4_2:70488803-70488822 None:intergenic 40.0%
!! TCATTTGGTACTGATCCTGA+GGG - chr4_2:70488925-70488944 None:intergenic 40.0%
!! TTCATTTGGTACTGATCCTG+AGG - chr4_2:70488926-70488945 None:intergenic 40.0%
TAGAAATAGGTCATGGTCTG+GGG + chr4_2:70489018-70489037 Msa0619370:three_prime_UTR 40.0%
AATGACCATTTGGGAGGATT+AGG + chr4_2:70489054-70489073 Msa0619370:three_prime_UTR 40.0%
ATGACCATTTGGGAGGATTA+GGG + chr4_2:70489055-70489074 Msa0619370:three_prime_UTR 40.0%
ATACTAACTGCAACTGCAAG+TGG + chr4_2:70489157-70489176 Msa0619370:three_prime_UTR 40.0%
TAATGGTGCATGTCTGATCT+TGG + chr4_2:70489186-70489205 Msa0619370:three_prime_UTR 40.0%
AATGGTGCATGTCTGATCTT+GGG + chr4_2:70489187-70489206 Msa0619370:three_prime_UTR 40.0%
ATCTTGGGTAGGTGATTACT+AGG + chr4_2:70489202-70489221 Msa0619370:three_prime_UTR 40.0%
TCTTGGGTAGGTGATTACTA+GGG + chr4_2:70489203-70489222 Msa0619370:three_prime_UTR 40.0%
AACTAGGCGAAGATCCAATT+AGG + chr4_2:70489335-70489354 Msa0619370:three_prime_UTR 40.0%
CCCCTAATAACATGCCTAAT+TGG - chr4_2:70489352-70489371 None:intergenic 40.0%
! GGCATGTTATTAGGGGTATA+TGG + chr4_2:70489356-70489375 Msa0619370:three_prime_UTR 40.0%
GCTGCTAGGGTAGTTAGTAT+TGG - chr4_2:70487819-70487838 None:intergenic 45.0%
!! TCTTCTTCAGTGTTGGTTGG+TGG - chr4_2:70487841-70487860 None:intergenic 45.0%
! GGAGCATTAGAATTACCACC+TGG + chr4_2:70487920-70487939 Msa0619370:CDS 45.0%
TGACAAGCTCATCATCAGTC+GGG - chr4_2:70487958-70487977 None:intergenic 45.0%
AATAGGAACAGCTACAGGGA+GGG - chr4_2:70488008-70488027 None:intergenic 45.0%
TAATAGGAACAGCTACAGGG+AGG - chr4_2:70488009-70488028 None:intergenic 45.0%
TTTGATCCATGGCATCTTCC+AGG + chr4_2:70488052-70488071 Msa0619370:CDS 45.0%
TAAGTACCTGGAAGATGCCA+TGG - chr4_2:70488061-70488080 None:intergenic 45.0%
CTCTTTACGGTGAGAAAGAG+TGG + chr4_2:70488183-70488202 Msa0619370:CDS 45.0%
! TGAACGGCCAGGATGATTTT+AGG + chr4_2:70488693-70488712 Msa0619370:CDS 45.0%
AAGTTCAAAGTGAGCCCAAG+TGG + chr4_2:70488813-70488832 Msa0619370:CDS 45.0%
!! CATTTGGTACTGATCCTGAG+GGG - chr4_2:70488924-70488943 None:intergenic 45.0%
ACTGCAAGTGGAGCTTCTAA+TGG + chr4_2:70489169-70489188 Msa0619370:three_prime_UTR 45.0%
GCTGCTAGGGTAGTTAGTAT+TGG - chr4_2:70487819-70487838 None:intergenic 45.0%
!! TCTTCTTCAGTGTTGGTTGG+TGG - chr4_2:70487841-70487860 None:intergenic 45.0%
! GGAGCATTAGAATTACCACC+TGG + chr4_2:70487920-70487939 Msa0619370:CDS 45.0%
TGACAAGCTCATCATCAGTC+GGG - chr4_2:70487958-70487977 None:intergenic 45.0%
AATAGGAACAGCTACAGGGA+GGG - chr4_2:70488008-70488027 None:intergenic 45.0%
TAATAGGAACAGCTACAGGG+AGG - chr4_2:70488009-70488028 None:intergenic 45.0%
TTTGATCCATGGCATCTTCC+AGG + chr4_2:70488052-70488071 Msa0619370:CDS 45.0%
TAAGTACCTGGAAGATGCCA+TGG - chr4_2:70488061-70488080 None:intergenic 45.0%
CTCTTTACGGTGAGAAAGAG+TGG + chr4_2:70488183-70488202 Msa0619370:CDS 45.0%
! TGAACGGCCAGGATGATTTT+AGG + chr4_2:70488693-70488712 Msa0619370:CDS 45.0%
AAGTTCAAAGTGAGCCCAAG+TGG + chr4_2:70488813-70488832 Msa0619370:CDS 45.0%
!! CATTTGGTACTGATCCTGAG+GGG - chr4_2:70488924-70488943 None:intergenic 45.0%
ACTGCAAGTGGAGCTTCTAA+TGG + chr4_2:70489169-70489188 Msa0619370:three_prime_UTR 45.0%
! TCCAATCGGCTTATCAGCTC+CGG - chr4_2:70488291-70488310 None:intergenic 50.0%
TAAGCCGATTGGAAAGCCGA+AGG + chr4_2:70488298-70488317 Msa0619370:CDS 50.0%
AGTGCCTTCGGCTTTCCAAT+CGG - chr4_2:70488305-70488324 None:intergenic 50.0%
!! ATTGGAAAGCCGAAGGCACT+TGG + chr4_2:70488305-70488324 Msa0619370:CDS 50.0%
!! TTGGAAAGCCGAAGGCACTT+GGG + chr4_2:70488306-70488325 Msa0619370:CDS 50.0%
TATGCTGGCAAAGCTCCCAA+AGG + chr4_2:70488350-70488369 Msa0619370:CDS 50.0%
TGGCCGTTCATCTTGATCTG+AGG - chr4_2:70488683-70488702 None:intergenic 50.0%
TCAGATCAAGATGAACGGCC+AGG + chr4_2:70488682-70488701 Msa0619370:CDS 50.0%
!! ACACATCAGATTCGGTGCCA+CGG + chr4_2:70488738-70488757 Msa0619370:CDS 50.0%
CAAAGGCTGAAACTGGGTCT+GGG - chr4_2:70488856-70488875 None:intergenic 50.0%
TCAAAGGCTGAAACTGGGTC+TGG - chr4_2:70488857-70488876 None:intergenic 50.0%
ACTGATCCTGAGGGGCAAAA+GGG - chr4_2:70488916-70488935 None:intergenic 50.0%
TACTGATCCTGAGGGGCAAA+AGG - chr4_2:70488917-70488936 None:intergenic 50.0%
GGATCCCTAATCCTCCCAAA+TGG - chr4_2:70489062-70489081 None:intergenic 50.0%
! CCATGGGACCCTCCAATTTT+AGG - chr4_2:70489083-70489102 None:intergenic 50.0%
CCTAAAATTGGAGGGTCCCA+TGG + chr4_2:70489080-70489099 Msa0619370:three_prime_UTR 50.0%
GTGCATGTCTGATCTTGGGT+AGG + chr4_2:70489191-70489210 Msa0619370:three_prime_UTR 50.0%
! TCCAATCGGCTTATCAGCTC+CGG - chr4_2:70488291-70488310 None:intergenic 50.0%
TAAGCCGATTGGAAAGCCGA+AGG + chr4_2:70488298-70488317 Msa0619370:CDS 50.0%
AGTGCCTTCGGCTTTCCAAT+CGG - chr4_2:70488305-70488324 None:intergenic 50.0%
!! ATTGGAAAGCCGAAGGCACT+TGG + chr4_2:70488305-70488324 Msa0619370:CDS 50.0%
!! TTGGAAAGCCGAAGGCACTT+GGG + chr4_2:70488306-70488325 Msa0619370:CDS 50.0%
TATGCTGGCAAAGCTCCCAA+AGG + chr4_2:70488350-70488369 Msa0619370:CDS 50.0%
TGGCCGTTCATCTTGATCTG+AGG - chr4_2:70488683-70488702 None:intergenic 50.0%
TCAGATCAAGATGAACGGCC+AGG + chr4_2:70488682-70488701 Msa0619370:CDS 50.0%
!! ACACATCAGATTCGGTGCCA+CGG + chr4_2:70488738-70488757 Msa0619370:CDS 50.0%
CAAAGGCTGAAACTGGGTCT+GGG - chr4_2:70488856-70488875 None:intergenic 50.0%
TCAAAGGCTGAAACTGGGTC+TGG - chr4_2:70488857-70488876 None:intergenic 50.0%
ACTGATCCTGAGGGGCAAAA+GGG - chr4_2:70488916-70488935 None:intergenic 50.0%
TACTGATCCTGAGGGGCAAA+AGG - chr4_2:70488917-70488936 None:intergenic 50.0%
GGATCCCTAATCCTCCCAAA+TGG - chr4_2:70489062-70489081 None:intergenic 50.0%
! CCATGGGACCCTCCAATTTT+AGG - chr4_2:70489083-70489102 None:intergenic 50.0%
CCTAAAATTGGAGGGTCCCA+TGG + chr4_2:70489080-70489099 Msa0619370:three_prime_UTR 50.0%
GTGCATGTCTGATCTTGGGT+AGG + chr4_2:70489191-70489210 Msa0619370:three_prime_UTR 50.0%
!! GTGTTGGTTGGTGGCTGCTA+GGG - chr4_2:70487832-70487851 None:intergenic 55.0%
!! AGTGTTGGTTGGTGGCTGCT+AGG - chr4_2:70487833-70487852 None:intergenic 55.0%
! GGGTGAAATCTGAAGCCAGG+TGG - chr4_2:70487938-70487957 None:intergenic 55.0%
! GTCGGGTGAAATCTGAAGCC+AGG - chr4_2:70487941-70487960 None:intergenic 55.0%
CAAACGGTTCAAGGCCGAAC+CGG + chr4_2:70488237-70488256 Msa0619370:CDS 55.0%
AAACGGTTCAAGGCCGAACC+GGG + chr4_2:70488238-70488257 Msa0619370:CDS 55.0%
TGCGGGAACCGGATATTGGA+AGG + chr4_2:70488262-70488281 Msa0619370:CDS 55.0%
ACCGGATATTGGAAGGCGAC+CGG + chr4_2:70488269-70488288 Msa0619370:CDS 55.0%
TCCGGTCGCCTTCCAATATC+CGG - chr4_2:70488273-70488292 None:intergenic 55.0%
ACCGGAGCTGATAAGCCGAT+TGG + chr4_2:70488287-70488306 Msa0619370:CDS 55.0%
CTTGAGTCGGTGTGAAACCG+TGG - chr4_2:70488758-70488777 None:intergenic 55.0%
!! CGGTTTCACACCGACTCAAG+CGG + chr4_2:70488758-70488777 Msa0619370:CDS 55.0%
GTGCTCAGAACCGCTTGAGT+CGG - chr4_2:70488771-70488790 None:intergenic 55.0%
CGTGGTTTCACCGTGCGATA+AGG + chr4_2:70488790-70488809 Msa0619370:CDS 55.0%
! AGATGACCCTTTTGCCCCTC+AGG + chr4_2:70488907-70488926 Msa0619370:CDS 55.0%
!! GTGTTGGTTGGTGGCTGCTA+GGG - chr4_2:70487832-70487851 None:intergenic 55.0%
!! AGTGTTGGTTGGTGGCTGCT+AGG - chr4_2:70487833-70487852 None:intergenic 55.0%
! GGGTGAAATCTGAAGCCAGG+TGG - chr4_2:70487938-70487957 None:intergenic 55.0%
! GTCGGGTGAAATCTGAAGCC+AGG - chr4_2:70487941-70487960 None:intergenic 55.0%
CAAACGGTTCAAGGCCGAAC+CGG + chr4_2:70488237-70488256 Msa0619370:CDS 55.0%
AAACGGTTCAAGGCCGAACC+GGG + chr4_2:70488238-70488257 Msa0619370:CDS 55.0%
TGCGGGAACCGGATATTGGA+AGG + chr4_2:70488262-70488281 Msa0619370:CDS 55.0%
ACCGGATATTGGAAGGCGAC+CGG + chr4_2:70488269-70488288 Msa0619370:CDS 55.0%
TCCGGTCGCCTTCCAATATC+CGG - chr4_2:70488273-70488292 None:intergenic 55.0%
ACCGGAGCTGATAAGCCGAT+TGG + chr4_2:70488287-70488306 Msa0619370:CDS 55.0%
CTTGAGTCGGTGTGAAACCG+TGG - chr4_2:70488758-70488777 None:intergenic 55.0%
!! CGGTTTCACACCGACTCAAG+CGG + chr4_2:70488758-70488777 Msa0619370:CDS 55.0%
GTGCTCAGAACCGCTTGAGT+CGG - chr4_2:70488771-70488790 None:intergenic 55.0%
CGTGGTTTCACCGTGCGATA+AGG + chr4_2:70488790-70488809 Msa0619370:CDS 55.0%
! AGATGACCCTTTTGCCCCTC+AGG + chr4_2:70488907-70488926 Msa0619370:CDS 55.0%
! CGGTTCGGCCTTGAACCGTT+TGG - chr4_2:70488239-70488258 None:intergenic 60.0%
AATATCCGGTTCCCGCAGCC+CGG - chr4_2:70488259-70488278 None:intergenic 60.0%
!! CTCAAGCGGTTCTGAGCACG+TGG + chr4_2:70488772-70488791 Msa0619370:CDS 60.0%
! CGGTTCGGCCTTGAACCGTT+TGG - chr4_2:70488239-70488258 None:intergenic 60.0%
AATATCCGGTTCCCGCAGCC+CGG - chr4_2:70488259-70488278 None:intergenic 60.0%
!! CTCAAGCGGTTCTGAGCACG+TGG + chr4_2:70488772-70488791 Msa0619370:CDS 60.0%
TTCAAGGCCGAACCGGGCTG+CGG + chr4_2:70488244-70488263 Msa0619370:CDS 65.0%
GGGCTGCGGGAACCGGATAT+TGG + chr4_2:70488258-70488277 Msa0619370:CDS 65.0%
TTCAAGGCCGAACCGGGCTG+CGG + chr4_2:70488244-70488263 Msa0619370:CDS 65.0%
GGGCTGCGGGAACCGGATAT+TGG + chr4_2:70488258-70488277 Msa0619370:CDS 65.0%
TCAAGGCCGAACCGGGCTGC+GGG + chr4_2:70488245-70488264 Msa0619370:CDS 70.0%
TCAAGGCCGAACCGGGCTGC+GGG + chr4_2:70488245-70488264 Msa0619370:CDS 70.0%
CCGGTTCCCGCAGCCCGGTT+CGG - chr4_2:70488254-70488273 None:intergenic 75.0%
CCGAACCGGGCTGCGGGAAC+CGG + chr4_2:70488251-70488270 Msa0619370:CDS 75.0%
CCGGTTCCCGCAGCCCGGTT+CGG - chr4_2:70488254-70488273 None:intergenic 75.0%
CCGAACCGGGCTGCGGGAAC+CGG + chr4_2:70488251-70488270 Msa0619370:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 70487749 70489457 70487749 ID=Msa0619370;Name=Msa0619370
chr4_2 mRNA 70487749 70489457 70487749 ID=Msa0619370-mRNA-1;Parent=Msa0619370;Name=Msa0619370-mRNA-1;_AED=0.07;_eAED=0.07;_QI=165|0.5|0.66|1|1|0.33|3|466|274
chr4_2 exon 70487749 70488073 70487749 ID=Msa0619370-mRNA-1:exon:20522;Parent=Msa0619370-mRNA-1
chr4_2 exon 70488177 70488415 70488177 ID=Msa0619370-mRNA-1:exon:20523;Parent=Msa0619370-mRNA-1
chr4_2 exon 70488566 70489457 70488566 ID=Msa0619370-mRNA-1:exon:20524;Parent=Msa0619370-mRNA-1
chr4_2 five_prime_UTR 70487749 70487913 70487749 ID=Msa0619370-mRNA-1:five_prime_utr;Parent=Msa0619370-mRNA-1
chr4_2 CDS 70487914 70488073 70487914 ID=Msa0619370-mRNA-1:cds;Parent=Msa0619370-mRNA-1
chr4_2 CDS 70488177 70488415 70488177 ID=Msa0619370-mRNA-1:cds;Parent=Msa0619370-mRNA-1
chr4_2 CDS 70488566 70488991 70488566 ID=Msa0619370-mRNA-1:cds;Parent=Msa0619370-mRNA-1
chr4_2 three_prime_UTR 70488992 70489457 70488992 ID=Msa0619370-mRNA-1:three_prime_utr;Parent=Msa0619370-mRNA-1
Gene Sequence

>Msa0619370

ATGCAAGGAGCATTAGAATTACCACCTGGCTTCAGATTTCACCCGACTGATGATGAGCTTGTCAATCACTACTTGTGTAGAAAGTGTGCTTCCCTCCCTGTAGCTGTTCCTATTATCAAAGAAATTGATTTGTATAAGTTTGATCCATGGCATCTTCCAGAAATGGCTCTTTACGGTGAGAAAGAGTGGTATTTTTTCTCTCCAAGGGATCGTAAATATCCAAACGGTTCAAGGCCGAACCGGGCTGCGGGAACCGGATATTGGAAGGCGACCGGAGCTGATAAGCCGATTGGAAAGCCGAAGGCACTTGGGATAAAGAAAGCACTCGTTTTCTATGCTGGCAAAGCTCCCAAAGGAATTAAAACCAATTGGATCATGCATGAGTATCGTCTTGCTAATCTTGATGATTGGGTCTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAATGACACTAAATCACCAATGTTTTCTGAGGAAGCTCAATTTGAGAATGAGACAAAACCTCAGATCAAGATGAACGGCCAGGATGATTTTAGGAACAGTGATCAATTGTACACTGACACATCAGATTCGGTGCCACGGTTTCACACCGACTCAAGCGGTTCTGAGCACGTGGTTTCACCGTGCGATAAGGAAGTTCAAAGTGAGCCCAAGTGGAATGAATTTGTATTGGGCCCAGACCCAGTTTCAGCCTTTGATTTTCAGTTGAATCTTATGGATGATGGTGAAGATGACCCTTTTGCCCCTCAGGATCAGTACCAAATGAATCAATTTTCGGGTTGGCAAGATGTGTTTATGTACCTGCCCAAGTAA
Protein sequence

>Msa0619370

MQGALELPPGFRFHPTDDELVNHYLCRKCASLPVAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGIKTNWIMHEYRLANLDDWVLCRIYNKKGKIEKYNDTKSPMFSEEAQFENETKPQIKMNGQDDFRNSDQLYTDTSDSVPRFHTDSSGSEHVVSPCDKEVQSEPKWNEFVLGPDPVSAFDFQLNLMDDGEDDPFAPQDQYQMNQFSGWQDVFMYLPK*