AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0659500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0659500 MtrunA17_Chr8g0384721 91.468 293 11 5 57 343 1 285 0.0 541
Msa0659500 MtrunA17_Chr3g0130731 68.687 297 70 7 57 340 1 287 3.99e-134 383
Msa0659500 MtrunA17_Chr3g0124761 62.752 298 88 7 57 343 1 286 1.95e-119 346
Msa0659500 MtrunA17_Chr2g0318101 67.683 164 39 3 63 214 15 176 7.90e-75 234
Msa0659500 MtrunA17_Chr2g0318081 67.702 161 47 2 61 220 14 170 8.70e-75 234
Msa0659500 MtrunA17_Chr7g0252971 55.838 197 72 2 63 244 8 204 8.81e-73 229
Msa0659500 MtrunA17_Chr8g0359921 68.944 161 47 2 61 220 12 170 1.61e-72 228
Msa0659500 MtrunA17_Chr5g0417791 64.103 156 55 1 61 215 1 156 2.79e-72 225
Msa0659500 MtrunA17_Chr4g0042561 63.871 155 55 1 62 215 8 162 3.25e-71 223
Msa0659500 MtrunA17_Chr4g0047841 65.143 175 37 4 63 214 15 188 7.23e-71 224
Msa0659500 MtrunA17_Chr2g0326361 54.545 187 72 2 63 246 14 190 2.71e-69 219
Msa0659500 MtrunA17_Chr7g0263931 61.635 159 58 1 61 216 9 167 2.07e-68 217
Msa0659500 MtrunA17_Chr2g0309891 43.966 232 116 5 61 282 4 231 6.79e-57 188
Msa0659500 MtrunA17_Chr8g0361731 44.248 226 103 8 65 277 16 231 5.99e-56 187
Msa0659500 MtrunA17_Chr5g0417001 42.553 235 114 6 65 281 16 247 9.34e-56 186
Msa0659500 MtrunA17_Chr6g0453131 50.588 170 65 3 62 218 14 177 2.21e-54 182
Msa0659500 MtrunA17_Chr6g0453451 55.484 155 66 2 61 214 18 170 9.76e-54 179
Msa0659500 MtrunA17_Chr6g0484441 52.121 165 68 3 63 224 5 161 2.27e-53 178
Msa0659500 MtrunA17_Chr4g0060931 53.659 164 67 3 61 220 15 173 3.22e-53 179
Msa0659500 MtrunA17_Chr6g0481091 52.866 157 67 4 63 216 6 158 3.83e-53 175
Msa0659500 MtrunA17_Chr3g0139331 52.469 162 68 2 63 221 11 166 6.14e-52 175
Msa0659500 MtrunA17_Chr4g0018391 46.667 180 83 5 63 235 7 180 8.02e-52 175
Msa0659500 MtrunA17_Chr3g0091921 52.121 165 76 2 61 224 14 176 8.17e-52 174
Msa0659500 MtrunA17_Chr8g0372121 49.689 161 71 3 63 219 6 160 1.25e-51 173
Msa0659500 MtrunA17_Chr5g0442771 51.205 166 72 3 65 221 20 185 2.61e-51 172
Msa0659500 MtrunA17_Chr7g0253011 51.205 166 74 2 60 220 14 177 2.89e-51 174
Msa0659500 MtrunA17_Chr3g0109821 54.037 161 68 3 61 218 4 161 6.06e-51 179
Msa0659500 MtrunA17_Chr5g0433781 53.416 161 68 4 61 218 4 160 6.94e-51 179
Msa0659500 MtrunA17_Chr4g0076731 53.247 154 64 2 65 216 56 203 8.84e-51 174
Msa0659500 MtrunA17_Chr1g0147421 50.289 173 72 4 57 221 17 183 1.41e-50 172
Msa0659500 MtrunA17_Chr7g0214071 52.695 167 67 4 52 215 4 161 1.80e-50 169
Msa0659500 MtrunA17_Chr2g0316971 54.140 157 63 3 63 214 23 175 2.15e-50 172
Msa0659500 MtrunA17_Chr5g0398971 48.780 164 74 3 57 215 1 159 2.42e-50 171
Msa0659500 MtrunA17_Chr2g0309331 48.256 172 76 4 57 221 2 167 4.75e-50 170
Msa0659500 MtrunA17_Chr4g0056541 44.751 181 86 4 63 235 7 181 4.75e-50 171
Msa0659500 MtrunA17_Chr5g0400461 49.112 169 69 3 59 217 2 163 1.19e-49 169
Msa0659500 MtrunA17_Chr5g0405211 50.955 157 67 3 63 215 8 158 1.23e-49 169
Msa0659500 MtrunA17_Chr7g0217721 48.045 179 77 4 61 225 17 193 1.32e-49 169
Msa0659500 MtrunA17_Chr1g0183741 47.283 184 83 4 63 241 10 184 3.17e-49 166
Msa0659500 MtrunA17_Chr2g0311651 40.969 227 117 7 57 269 15 238 9.87e-49 166
Msa0659500 MtrunA17_Chr4g0017921 50.318 157 67 3 63 215 8 157 2.93e-48 166
Msa0659500 MtrunA17_Chr6g0461661 51.592 157 71 2 61 214 16 170 9.57e-48 165
Msa0659500 MtrunA17_Chr1g0200561 48.077 156 71 3 63 214 19 168 1.39e-47 164
Msa0659500 MtrunA17_Chr2g0311661 51.235 162 62 5 65 211 23 182 3.50e-47 161
Msa0659500 MtrunA17_Chr7g0261411 47.253 182 83 3 63 241 10 181 4.19e-47 161
Msa0659500 MtrunA17_Chr7g0217711 51.634 153 67 3 61 208 17 167 5.25e-47 157
Msa0659500 MtrunA17_Chr2g0312321 42.925 212 102 6 62 268 10 207 6.05e-47 161
Msa0659500 MtrunA17_Chr4g0054791 48.824 170 76 5 57 220 1 165 7.05e-46 159
Msa0659500 MtrunA17_Chr8g0385991 46.243 173 87 3 59 227 10 180 1.65e-45 155
Msa0659500 MtrunA17_Chr8g0346001 43.605 172 88 3 57 219 9 180 5.84e-45 159
Msa0659500 MtrunA17_Chr5g0428991 51.899 158 65 4 63 215 25 176 1.44e-44 161
Msa0659500 MtrunA17_Chr3g0144271 52.597 154 66 4 63 212 23 173 6.49e-44 156
Msa0659500 MtrunA17_Chr3g0131911 48.780 164 75 3 59 215 10 171 2.89e-43 149
Msa0659500 MtrunA17_Chr3g0130101 45.860 157 78 3 63 216 7 159 7.25e-43 152
Msa0659500 MtrunA17_Chr3g0128151 49.682 157 68 4 63 214 22 172 2.63e-42 154
Msa0659500 MtrunA17_Chr1g0201021 47.097 155 75 4 65 216 21 171 2.90e-41 151
Msa0659500 MtrunA17_Chr3g0092671 44.624 186 93 6 60 241 2 181 1.33e-40 149
Msa0659500 MtrunA17_Chr1g0197361 44.186 172 87 5 65 232 10 176 3.83e-40 149
Msa0659500 MtrunA17_Chr8g0364791 43.038 158 83 3 62 216 5 158 5.48e-40 146
Msa0659500 MtrunA17_Chr3g0128111 45.455 154 73 4 66 214 45 192 1.22e-39 140
Msa0659500 MtrunA17_Chr4g0038751 46.104 154 70 4 65 214 17 161 2.81e-39 140
Msa0659500 MtrunA17_Chr1g0197351 43.429 175 94 3 45 214 24 198 4.32e-39 144
Msa0659500 MtrunA17_Chr8g0345671 46.795 156 67 6 62 211 10 155 2.46e-37 138
Msa0659500 MtrunA17_Chr8g0384201 41.139 158 86 3 62 216 5 158 9.08e-37 138
Msa0659500 MtrunA17_Chr4g0026141 40.476 168 92 4 63 223 5 171 1.10e-35 130
Msa0659500 MtrunA17_Chr7g0266701 34.463 177 101 5 63 227 4 177 1.65e-34 127
Msa0659500 MtrunA17_Chr4g0050701 41.401 157 79 3 63 214 11 159 6.83e-34 123
Msa0659500 MtrunA17_Chr2g0321631 34.694 245 136 8 64 292 5 241 1.54e-33 124
Msa0659500 MtrunA17_Chr3g0113001 52.033 123 57 2 108 229 10 131 5.97e-33 124
Msa0659500 MtrunA17_Chr8g0345691 39.623 159 72 6 63 211 12 156 2.95e-31 122
Msa0659500 MtrunA17_Chr2g0321741 45.528 123 54 4 91 211 20 131 1.84e-30 118
Msa0659500 MtrunA17_Chr8g0384351 42.073 164 70 6 58 220 5 144 8.43e-30 112
Msa0659500 MtrunA17_Chr8g0345711 38.750 160 84 6 63 209 12 170 2.10e-29 111
Msa0659500 MtrunA17_Chr8g0345731 42.537 134 69 4 63 188 24 157 5.34e-28 107
Msa0659500 MtrunA17_Chr3g0113031 50.459 109 45 3 126 229 3 107 1.91e-25 103
Msa0659500 MtrunA17_Chr8g0345721 36.196 163 68 5 66 193 38 199 1.70e-24 99.4
Msa0659500 MtrunA17_Chr8g0345701 37.584 149 70 6 57 185 1 146 5.24e-23 94.4
Msa0659500 MtrunA17_Chr3g0130321 33.333 165 95 5 57 212 1 159 9.48e-23 94.4
Msa0659500 MtrunA17_Chr7g0243371 54.667 75 31 1 116 187 17 91 6.42e-21 86.7
Msa0659500 MtrunA17_Chr8g0345741 37.097 124 59 4 94 212 23 132 7.70e-21 87.8
Msa0659500 MtrunA17_Chr7g0251661 30.882 136 87 4 59 190 6 138 1.29e-17 79.0
Msa0659500 MtrunA17_Chr7g0251651 31.387 137 87 4 58 190 13 146 1.75e-17 79.7
Msa0659500 MtrunA17_Chr7g0251671 29.323 133 87 4 62 190 9 138 1.29e-15 73.6
Msa0659500 MtrunA17_Chr7g0274971 33.129 163 90 8 69 221 11 164 1.10e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0659500 AT1G01720.1 62.414 290 103 5 57 343 1 287 2.19e-119 346
Msa0659500 AT5G08790.1 63.194 288 77 8 57 336 1 267 4.57e-116 337
Msa0659500 AT5G63790.1 57.009 321 90 10 33 342 19 302 3.82e-110 323
Msa0659500 AT5G63790.2 57.413 317 87 10 33 338 29 308 4.48e-110 324
Msa0659500 AT1G77450.1 59.770 261 60 7 61 318 8 226 4.84e-96 285
Msa0659500 AT1G69490.1 54.369 206 88 3 63 267 9 209 3.70e-75 233
Msa0659500 AT1G52890.1 67.702 161 47 2 61 220 12 168 8.60e-74 231
Msa0659500 AT3G15500.1 67.702 161 47 2 61 220 12 168 2.04e-73 230
Msa0659500 AT4G27410.2 69.677 155 42 2 61 214 12 162 3.98e-73 229
Msa0659500 AT1G61110.1 65.663 166 47 2 59 214 12 177 5.63e-71 224
Msa0659500 AT3G04070.2 65.217 161 47 2 63 214 10 170 1.30e-69 221
Msa0659500 AT3G04070.1 61.017 177 44 3 63 214 10 186 2.68e-69 221
Msa0659500 AT4G27410.3 62.791 172 42 3 61 214 12 179 1.19e-68 218
Msa0659500 AT3G15510.1 65.839 161 39 4 67 214 21 178 1.37e-66 214
Msa0659500 AT1G52880.1 65.409 159 42 3 67 214 21 177 3.67e-62 201
Msa0659500 AT5G39610.1 50.000 184 84 3 46 228 3 179 7.59e-57 186
Msa0659500 AT5G61430.1 50.575 174 83 2 48 220 1 172 4.61e-56 186
Msa0659500 AT5G07680.2 54.878 164 65 3 61 220 1 159 3.23e-55 183
Msa0659500 AT5G07680.1 56.329 158 60 3 61 214 15 167 3.57e-55 183
Msa0659500 AT3G18400.1 54.375 160 65 3 63 220 5 158 7.48e-55 182
Msa0659500 AT1G26870.1 51.807 166 60 3 63 214 16 175 8.92e-55 185
Msa0659500 AT5G39820.1 48.276 174 70 3 65 218 22 195 4.56e-54 181
Msa0659500 AT3G29035.1 48.223 197 89 4 61 254 22 208 6.21e-54 180
Msa0659500 AT1G76420.1 54.777 157 63 4 63 216 22 173 7.67e-54 180
Msa0659500 AT2G33480.2 54.717 159 62 3 58 215 10 159 3.37e-53 176
Msa0659500 AT3G04060.1 51.445 173 74 3 58 225 15 182 5.67e-53 178
Msa0659500 AT2G33480.1 55.346 159 63 4 58 215 10 161 5.98e-53 176
Msa0659500 AT5G62380.2 46.486 185 89 3 57 237 1 179 1.27e-52 177
Msa0659500 AT5G62380.1 46.486 185 89 3 57 237 1 179 1.27e-52 177
Msa0659500 AT3G03200.1 52.866 157 68 3 61 214 4 157 1.44e-52 181
Msa0659500 AT2G24430.2 52.469 162 69 3 63 221 16 172 2.27e-52 176
Msa0659500 AT2G24430.1 52.469 162 69 3 63 221 16 172 2.27e-52 176
Msa0659500 AT3G17730.1 52.229 157 68 3 63 216 6 158 2.59e-52 173
Msa0659500 AT5G17260.1 53.503 157 67 3 61 214 4 157 2.89e-51 177
Msa0659500 AT5G53950.1 53.416 161 58 3 63 214 17 169 9.62e-51 173
Msa0659500 AT2G43000.1 50.993 151 70 2 65 214 20 167 9.78e-51 170
Msa0659500 AT2G02450.1 52.597 154 65 2 65 216 53 200 1.58e-50 172
Msa0659500 AT2G02450.2 52.597 154 65 2 65 216 53 200 1.75e-50 173
Msa0659500 AT3G15170.1 50.299 167 66 3 63 220 20 178 2.32e-50 170
Msa0659500 AT4G36160.2 48.837 172 76 4 48 215 1 164 2.75e-50 172
Msa0659500 AT5G13180.1 55.000 160 61 3 59 215 10 161 2.98e-50 168
Msa0659500 AT5G18270.1 52.469 162 61 3 61 214 19 172 4.06e-50 170
Msa0659500 AT1G12260.2 42.500 200 98 5 57 248 1 191 4.21e-50 171
Msa0659500 AT5G18270.2 52.469 162 61 3 61 214 19 172 5.52e-50 170
Msa0659500 AT1G12260.1 49.080 163 73 3 57 215 1 157 8.47e-50 171
Msa0659500 AT1G62700.1 48.466 163 74 3 57 215 1 157 8.92e-50 171
Msa0659500 AT1G62700.2 48.466 163 74 3 57 215 1 157 8.92e-50 171
Msa0659500 AT4G36160.1 50.625 160 69 3 60 215 7 160 9.21e-50 171
Msa0659500 AT4G36160.3 50.625 160 69 3 60 215 7 160 9.21e-50 171
Msa0659500 AT5G46590.1 51.250 160 71 4 59 214 2 158 1.16e-49 168
Msa0659500 AT2G18060.3 49.068 161 72 3 60 216 6 160 1.16e-49 170
Msa0659500 AT2G18060.1 49.068 161 72 3 60 216 6 160 1.16e-49 170
Msa0659500 AT1G79580.3 47.024 168 77 3 59 221 13 173 2.84e-49 169
Msa0659500 AT1G79580.5 47.024 168 77 3 59 221 13 173 2.84e-49 169
Msa0659500 AT1G79580.4 47.024 168 77 3 59 221 13 173 2.84e-49 169
Msa0659500 AT1G79580.2 47.024 168 77 3 59 221 13 173 2.84e-49 169
Msa0659500 AT1G79580.1 47.024 168 77 3 59 221 13 173 2.84e-49 169
Msa0659500 AT3G10490.1 47.253 182 83 4 60 238 24 195 3.74e-49 165
Msa0659500 AT4G17980.1 50.932 161 72 4 59 214 2 160 3.99e-49 166
Msa0659500 AT1G56010.2 47.150 193 83 6 62 238 18 207 4.19e-49 167
Msa0659500 AT1G71930.2 49.359 156 69 3 63 214 9 158 5.07e-49 167
Msa0659500 AT1G71930.1 49.359 156 69 3 63 214 9 158 5.07e-49 167
Msa0659500 AT4G17980.2 50.932 161 72 4 59 214 2 160 5.98e-49 166
Msa0659500 AT4G10350.1 51.592 157 68 3 63 215 9 161 1.03e-48 167
Msa0659500 AT1G65910.1 50.296 169 74 4 61 223 4 168 1.14e-48 173
Msa0659500 AT3G10480.1 47.253 182 83 4 60 238 24 195 1.94e-48 169
Msa0659500 AT1G54330.1 50.920 163 70 3 61 220 4 159 2.22e-48 165
Msa0659500 AT3G12977.1 50.327 153 72 2 63 214 18 167 3.59e-48 164
Msa0659500 AT3G10480.2 47.802 182 81 5 60 238 24 194 5.43e-48 167
Msa0659500 AT5G46590.2 52.778 144 64 2 59 198 2 145 6.45e-48 163
Msa0659500 AT5G66300.1 48.466 163 75 3 60 218 9 166 8.30e-48 163
Msa0659500 AT3G10490.2 47.253 182 83 4 60 238 24 195 1.23e-47 167
Msa0659500 AT1G33280.1 49.682 157 68 3 63 215 8 157 1.57e-47 163
Msa0659500 AT3G61910.1 39.000 200 109 3 57 243 5 204 3.66e-47 162
Msa0659500 AT2G46770.1 44.186 172 83 3 57 215 10 181 9.16e-47 162
Msa0659500 AT1G32510.1 45.989 187 87 4 57 233 1 183 9.64e-47 160
Msa0659500 AT1G33060.1 46.597 191 83 5 49 224 7 193 1.68e-46 167
Msa0659500 AT1G33060.2 46.597 191 83 5 49 224 7 193 1.77e-46 167
Msa0659500 AT5G24590.2 49.682 157 71 3 63 215 13 165 7.41e-46 162
Msa0659500 AT4G28530.1 46.821 173 63 4 62 214 9 172 1.37e-45 159
Msa0659500 AT4G35580.2 52.229 157 64 4 63 214 9 159 1.92e-45 162
Msa0659500 AT4G35580.3 52.229 157 64 4 63 214 9 159 2.14e-45 162
Msa0659500 AT4G35580.1 48.634 183 77 6 63 240 9 179 3.21e-45 162
Msa0659500 AT1G32770.1 43.787 169 85 3 57 215 10 178 4.51e-45 158
Msa0659500 AT3G10480.3 41.204 216 81 5 59 238 23 228 1.33e-44 160
Msa0659500 AT3G10500.1 49.045 157 73 3 63 216 9 161 4.71e-44 159
Msa0659500 AT3G49530.2 47.134 157 75 3 63 215 13 165 7.83e-44 156
Msa0659500 AT3G12910.1 48.315 178 76 7 58 221 17 192 2.41e-43 152
Msa0659500 AT3G49530.1 47.134 157 75 3 63 215 13 165 2.42e-43 155
Msa0659500 AT2G17040.1 43.548 186 78 6 65 233 8 183 1.78e-42 149
Msa0659500 AT1G34180.3 43.860 171 89 3 65 232 18 184 2.29e-42 153
Msa0659500 AT5G04410.1 47.771 157 75 3 63 216 9 161 2.37e-42 155
Msa0659500 AT1G34180.1 43.860 171 89 3 65 232 18 184 1.32e-41 152
Msa0659500 AT1G34190.1 42.690 171 91 3 65 232 18 184 3.18e-40 149
Msa0659500 AT1G34180.4 41.530 183 88 3 65 232 18 196 4.34e-40 147
Msa0659500 AT5G09330.5 44.720 161 82 4 59 216 2 158 5.09e-40 147
Msa0659500 AT5G09330.2 44.720 161 82 4 59 216 2 158 5.09e-40 147
Msa0659500 AT5G09330.4 44.720 161 82 4 59 216 2 158 5.09e-40 147
Msa0659500 AT5G09330.3 44.720 161 82 4 59 216 2 158 5.09e-40 147
Msa0659500 AT5G09330.1 44.720 161 82 4 59 216 2 158 5.09e-40 147
Msa0659500 AT3G44290.2 33.898 236 125 7 65 295 16 225 7.87e-40 140
Msa0659500 AT1G34180.2 41.530 183 88 3 65 232 18 196 2.29e-39 147
Msa0659500 AT2G27300.1 45.033 151 70 3 63 211 14 153 7.75e-39 141
Msa0659500 AT3G44290.1 34.061 229 120 7 65 288 16 218 1.51e-38 140
Msa0659500 AT5G64060.1 40.678 177 98 4 59 232 2 174 1.86e-38 140
Msa0659500 AT5G22290.1 42.857 154 74 4 65 215 23 165 1.26e-37 137
Msa0659500 AT1G32870.3 47.977 173 77 6 49 216 34 198 3.24e-37 140
Msa0659500 AT1G32870.1 50.314 159 68 5 63 216 10 162 7.51e-37 139
Msa0659500 AT1G32870.2 50.314 159 68 5 63 216 10 162 7.69e-37 139
Msa0659500 AT5G61430.2 55.856 111 46 2 111 220 1 109 1.84e-34 127
Msa0659500 AT5G22380.1 33.333 249 129 9 60 293 2 228 6.25e-33 122
Msa0659500 AT1G56010.1 46.853 143 58 5 111 238 1 140 1.13e-32 122
Msa0659500 AT3G44350.2 38.506 174 87 7 62 223 4 169 3.51e-32 120
Msa0659500 AT5G64530.1 39.306 173 80 4 61 220 1 161 6.87e-32 118
Msa0659500 AT2G33480.3 56.436 101 39 3 116 215 8 104 1.18e-31 118
Msa0659500 AT5G04395.1 40.268 149 72 3 63 194 28 176 4.68e-31 116
Msa0659500 AT3G12977.2 50.926 108 49 2 108 214 10 114 7.23e-31 117
Msa0659500 AT3G44350.1 38.509 161 79 6 62 207 4 159 1.92e-30 114
Msa0659500 AT4G10350.2 50.000 116 53 2 116 230 18 129 3.75e-30 117
Msa0659500 AT5G64530.2 44.697 132 58 3 61 189 1 120 7.88e-30 112
Msa0659500 AT4G28530.2 37.059 170 47 3 62 214 9 135 1.09e-28 113
Msa0659500 AT4G01550.1 40.769 130 70 3 66 188 7 136 6.25e-26 108
Msa0659500 AT4G01520.1 35.227 176 97 5 64 231 5 171 1.20e-25 104
Msa0659500 AT4G01540.3 33.508 191 107 6 66 245 7 188 1.25e-24 103
Msa0659500 AT4G01540.4 33.508 191 107 6 66 245 7 188 1.30e-24 103
Msa0659500 AT4G01540.1 35.632 174 95 5 66 231 7 171 1.85e-24 103
Msa0659500 AT4G01540.2 35.632 174 95 5 66 231 7 171 2.07e-24 103
Msa0659500 AT3G04420.2 40.769 130 72 3 61 185 1 130 1.89e-23 98.6
Msa0659500 AT3G04420.1 40.769 130 72 3 61 185 1 130 5.28e-23 98.2
Msa0659500 AT1G02230.1 36.296 135 75 4 64 190 4 135 2.50e-22 96.7
Msa0659500 AT2G43000.2 47.253 91 44 2 125 214 2 89 7.51e-22 92.0
Msa0659500 AT5G14000.2 36.000 150 91 3 57 203 9 156 5.28e-21 88.6
Msa0659500 AT5G14000.1 33.742 163 96 4 57 216 9 162 1.53e-20 88.6
Msa0659500 AT3G56530.1 35.032 157 86 6 63 212 52 199 3.46e-20 90.1
Msa0659500 AT3G10490.4 51.250 80 35 2 136 214 2 78 4.07e-20 90.5
Msa0659500 AT3G10490.3 51.250 80 35 2 136 214 2 78 4.07e-20 90.5
Msa0659500 AT1G02220.1 33.333 165 93 5 61 220 1 153 4.80e-20 90.5
Msa0659500 AT1G02250.1 38.462 130 69 4 64 185 4 130 1.30e-19 89.0
Msa0659500 AT1G01010.1 35.252 139 73 5 61 185 1 136 4.26e-17 82.4
Msa0659500 AT2G18060.2 46.753 77 34 2 141 216 2 72 2.20e-15 75.9
Msa0659500 AT5G50820.1 34.074 135 72 6 60 187 14 138 1.46e-13 68.9
Msa0659500 AT5G22290.2 42.105 76 31 3 142 215 2 66 2.92e-11 63.2
Msa0659500 AT4G29230.1 33.333 153 72 8 63 188 48 197 8.10e-11 63.5
Msa0659500 AT4G29230.2 33.333 153 72 8 63 188 47 196 8.85e-11 63.5

Find 130 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTAGGGTTTGTTGAATT+TGG 0.180719 4_3:+69912637 Msa0659500:three_prime_UTR
AAATCAATTTCTTTGATAAT+AGG 0.219498 4_3:-69911451 None:intergenic
TCCAATTGGGCATGTTATTA+GGG 0.222956 4_3:+69912769 Msa0659500:three_prime_UTR
ATCCAATTGGGCATGTTATT+AGG 0.228872 4_3:+69912768 Msa0659500:three_prime_UTR
AATGACCATTTGGGAGGATT+AGG 0.250459 4_3:+69912474 Msa0659500:three_prime_UTR
TGAAAATCAAAGGCTGAAAC+TGG 0.273975 4_3:-69912280 None:intergenic
GGGCTGCGGGAACCGGATAT+TGG 0.287906 4_3:+69911684 Msa0659500:CDS
TACTAGGGTTTGTTGAATTT+GGG 0.300795 4_3:+69912638 Msa0659500:three_prime_UTR
GAAAATTGAAAATGACCATT+TGG 0.304176 4_3:+69912464 Msa0659500:three_prime_UTR
GGCATGTTATTAGGGGTATA+TGG 0.335913 4_3:+69912777 Msa0659500:three_prime_UTR
TTCTATTACTACCTCCGTTC+CGG 0.344797 4_3:+69912854 Msa0659500:three_prime_UTR
TTCTTTATCCCAAGTGCCTT+CGG 0.348007 4_3:-69911740 None:intergenic
TTTACAGAAATGGCTCTTTA+CGG 0.351320 4_3:+69911596 Msa0659500:intron
TTTGATCCATGGCATCTTCC+AGG 0.357407 4_3:+69911481 Msa0659500:CDS
AATAACAAATTAAATTTACT+TGG 0.360188 4_3:-69912404 None:intergenic
AACCCGAAAATTGATTCATT+TGG 0.363530 4_3:-69912357 None:intergenic
AAAATTGAAAATGACCATTT+GGG 0.367814 4_3:+69912465 Msa0659500:three_prime_UTR
AAGTGGAATGAATTTGTATT+GGG 0.373773 4_3:+69912250 Msa0659500:CDS
TAATGGTGCATGTCTGATCT+TGG 0.383752 4_3:+69912606 Msa0659500:three_prime_UTR
ATTAATTGCAGCTTGATGAT+TGG 0.388930 4_3:+69911975 Msa0659500:intron
TTGATAATAGGAACAGCTAC+AGG 0.390807 4_3:-69911439 None:intergenic
CCGAACCGGGCTGCGGGAAC+CGG 0.391909 4_3:+69911677 Msa0659500:CDS
AGTGTTACTGTTAACATGTA+AGG 0.392554 4_3:+69912805 Msa0659500:three_prime_UTR
AGGATTAGGGATCCTAAAAT+TGG 0.395578 4_3:+69912488 Msa0659500:three_prime_UTR
ATGACCATTTGGGAGGATTA+GGG 0.396512 4_3:+69912475 Msa0659500:three_prime_UTR
CCAAAGGAATTAAAACCAAT+TGG 0.402035 4_3:+69911792 Msa0659500:CDS
CGGTTCGGCCTTGAACCGTT+TGG 0.403070 4_3:-69911662 None:intergenic
CCGGTTCCCGCAGCCCGGTT+CGG 0.410215 4_3:-69911677 None:intergenic
TCAAAGGCTGAAACTGGGTC+TGG 0.410879 4_3:-69912274 None:intergenic
TGAGTTCGAAGTTGTGAGAA+AGG 0.411148 4_3:-69911205 None:intergenic
AGTTGCAGTTAGTATTTGTT+TGG 0.411894 4_3:-69912569 None:intergenic
TTAATTGCAGCTTGATGATT+GGG 0.412168 4_3:+69911976 Msa0659500:intron
CAAGTGGAATGAATTTGTAT+TGG 0.415048 4_3:+69912249 Msa0659500:CDS
AGTGTTGGTTGGTGGCTGCT+AGG 0.418122 4_3:-69911256 None:intergenic
TGGTTGAAATTTAAGAAAAG+TGG 0.418578 4_3:+69912685 Msa0659500:three_prime_UTR
CCGGTTTAATTGACATACTT+TGG 0.419854 4_3:+69912873 Msa0659500:three_prime_UTR
GTAAATATCCAAACGGTTCA+AGG 0.423042 4_3:+69911654 Msa0659500:CDS
CAACGAGGTGTAGATCCAAT+TGG 0.423382 4_3:+69912755 Msa0659500:three_prime_UTR
TGTCGAATTTACAACAAGAA+AGG 0.430099 4_3:+69912004 Msa0659500:CDS
CCAAAGTATGTCAATTAAAC+CGG 0.431507 4_3:-69912873 None:intergenic
ATCTTGGGTAGGTGATTACT+AGG 0.434038 4_3:+69912622 Msa0659500:three_prime_UTR
TCTTCTTCTTCAGTGTTGGT+TGG 0.434262 4_3:-69911267 None:intergenic
TACTGATCCTGAGGGGCAAA+AGG 0.435530 4_3:-69912334 None:intergenic
CCCCTAATAACATGCCCAAT+TGG 0.438787 4_3:-69912770 None:intergenic
CAAATTAAATTTACTTGGGC+AGG 0.439187 4_3:-69912399 None:intergenic
CAAACGGTTCAAGGCCGAAC+CGG 0.440323 4_3:+69911663 Msa0659500:CDS
TTCAAGGCCGAACCGGGCTG+CGG 0.445265 4_3:+69911670 Msa0659500:CDS
CAATACAAATTCATTCCACT+TGG 0.450741 4_3:-69912248 None:intergenic
AATAGAAATAGGTCATGGTC+TGG 0.452417 4_3:+69912436 Msa0659500:three_prime_UTR
AATGGTGCATGTCTGATCTT+GGG 0.455923 4_3:+69912607 Msa0659500:three_prime_UTR
ATAGAAATAGGTCATGGTCT+GGG 0.460816 4_3:+69912437 Msa0659500:three_prime_UTR
GGTTGAAATTTAAGAAAAGT+GGG 0.461181 4_3:+69912686 Msa0659500:three_prime_UTR
GCAGTTAGTATTTGTTTGGT+AGG 0.465487 4_3:-69912565 None:intergenic
AACGGAGGTAGTAATAGAAA+TGG 0.466954 4_3:-69912850 None:intergenic
TCTTCTTCAGTGTTGGTTGG+TGG 0.470870 4_3:-69911264 None:intergenic
TTTGGATATTTACGATCCCT+TGG 0.476106 4_3:-69911644 None:intergenic
TCCGGTCGCCTTCCAATATC+CGG 0.478603 4_3:-69911696 None:intergenic
CCTAAAATTGGAGGGTCCCA+TGG 0.480588 4_3:+69912500 Msa0659500:three_prime_UTR
TCAAGGCCGAACCGGGCTGC+GGG 0.480914 4_3:+69911671 Msa0659500:CDS
TCCAATCGGCTTATCAGCTC+CGG 0.481369 4_3:-69911714 None:intergenic
CGTGGTTTCACCGTGCGATA+AGG 0.482787 4_3:+69912210 Msa0659500:CDS
CAGTTGAATCTTATGGATGA+TGG 0.485236 4_3:+69912301 Msa0659500:CDS
ATACTCATGCATGATCCAAT+TGG 0.485541 4_3:-69911807 None:intergenic
CAAAGGCTGAAACTGGGTCT+GGG 0.487541 4_3:-69912273 None:intergenic
ATTGGAAAGCCGAAGGCACT+TGG 0.488594 4_3:+69911731 Msa0659500:CDS
GTCGAATTTACAACAAGAAA+GGG 0.491222 4_3:+69912005 Msa0659500:CDS
TGTGAGAAAGGAAGAAGTTG+TGG 0.504684 4_3:-69911193 None:intergenic
GTGTTGGTTGGTGGCTGCTA+GGG 0.507815 4_3:-69911255 None:intergenic
AACGAGGTGTAGATCCAATT+GGG 0.510509 4_3:+69912756 Msa0659500:three_prime_UTR
ACTGCAAGTGGAGCTTCTAA+TGG 0.512363 4_3:+69912589 Msa0659500:three_prime_UTR
TTCATTTGGTACTGATCCTG+AGG 0.513979 4_3:-69912343 None:intergenic
CACTATTCCTAAAATCATCC+TGG 0.521129 4_3:-69912120 None:intergenic
AATATCCGGTTCCCGCAGCC+CGG 0.524402 4_3:-69911682 None:intergenic
AGTGCCTTCGGCTTTCCAAT+CGG 0.524558 4_3:-69911728 None:intergenic
ATTTGTATAAGTTTGATCCA+TGG 0.528456 4_3:+69911470 Msa0659500:CDS
AAACGGTTCAAGGCCGAACC+GGG 0.528831 4_3:+69911664 Msa0659500:CDS
ATACTAACTGCAACTGCAAG+TGG 0.529536 4_3:+69912577 Msa0659500:three_prime_UTR
GCTGCTAGGGTAGTTAGTAT+TGG 0.532321 4_3:-69911242 None:intergenic
TCAGATCAAGATGAACGGCC+AGG 0.532358 4_3:+69912102 Msa0659500:CDS
GTCGGGTGAAATCTGAAGCC+AGG 0.534952 4_3:-69911367 None:intergenic
GTACACTGACACATCAGATT+CGG 0.536856 4_3:+69912150 Msa0659500:CDS
TGGCCGTTCATCTTGATCTG+AGG 0.540560 4_3:-69912100 None:intergenic
ACCGGATATTGGAAGGCGAC+CGG 0.540712 4_3:+69911695 Msa0659500:CDS
TCTTGGGTAGGTGATTACTA+GGG 0.549155 4_3:+69912623 Msa0659500:three_prime_UTR
GGATCCCTAATCCTCCCAAA+TGG 0.552239 4_3:-69912479 None:intergenic
TGCGGGAACCGGATATTGGA+AGG 0.555135 4_3:+69911688 Msa0659500:CDS
ATAACAAATTAAATTTACTT+GGG 0.555352 4_3:-69912403 None:intergenic
TGACAAGCTCATCATCAGTC+GGG 0.555923 4_3:-69911384 None:intergenic
ACCGGAGCTGATAAGCCGAT+TGG 0.556049 4_3:+69911713 Msa0659500:CDS
ACTGATCCTGAGGGGCAAAA+GGG 0.560321 4_3:-69912333 None:intergenic
ATGTACGTACTCTTAAATTG+TGG 0.565839 4_3:-69911868 None:intergenic
CTCTTTACGGTGAGAAAGAG+TGG 0.566657 4_3:+69911609 Msa0659500:CDS
AAGATTCAACTGAAAATCAA+AGG 0.566776 4_3:-69912290 None:intergenic
CTCAAGCGGTTCTGAGCACG+TGG 0.568997 4_3:+69912192 Msa0659500:CDS
ATTAGGGATCCTAAAATTGG+AGG 0.571106 4_3:+69912491 Msa0659500:three_prime_UTR
ATTGAATATACGCGAATGCA+AGG 0.577743 4_3:+69911328 Msa0659500:CDS
GTTGAAATTTAAGAAAAGTG+GGG 0.577847 4_3:+69912687 Msa0659500:three_prime_UTR
TAAGTACCTGGAAGATGCCA+TGG 0.577977 4_3:-69911487 None:intergenic
ATTGAAAATGACCATTTGGG+AGG 0.580131 4_3:+69912468 Msa0659500:three_prime_UTR
CTTTGAACTTCCTTATCGCA+CGG 0.587532 4_3:-69912220 None:intergenic
AGGGATCGTAAATATCCAAA+CGG 0.593976 4_3:+69911647 Msa0659500:CDS
TTGACAAGCTCATCATCAGT+CGG 0.594991 4_3:-69911385 None:intergenic
GAAAATCAAAGGCTGAAACT+GGG 0.599958 4_3:-69912279 None:intergenic
AATACAAATTCATTCCACTT+GGG 0.602517 4_3:-69912247 None:intergenic
ACACATCAGATTCGGTGCCA+CGG 0.603238 4_3:+69912158 Msa0659500:CDS
TCATTTGGTACTGATCCTGA+GGG 0.603683 4_3:-69912342 None:intergenic
TAGAAATAGGTCATGGTCTG+GGG 0.608175 4_3:+69912438 Msa0659500:three_prime_UTR
AAGTTCAAAGTGAGCCCAAG+TGG 0.609329 4_3:+69912233 Msa0659500:CDS
TTGGAAAGCCGAAGGCACTT+GGG 0.610579 4_3:+69911732 Msa0659500:CDS
CGGTTTCACACCGACTCAAG+CGG 0.614416 4_3:+69912178 Msa0659500:CDS
TTAGGGATCCTAAAATTGGA+GGG 0.619634 4_3:+69912492 Msa0659500:three_prime_UTR
GTATGTCAATTAAACCGGAA+CGG 0.623626 4_3:-69912868 None:intergenic
TTAGTAATAGAAATAGGTCA+TGG 0.629502 4_3:+69912431 Msa0659500:three_prime_UTR
GTGCTCAGAACCGCTTGAGT+CGG 0.630980 4_3:-69912188 None:intergenic
AATAGGAACAGCTACAGGGA+GGG 0.637721 4_3:-69911434 None:intergenic
CTTGAGTCGGTGTGAAACCG+TGG 0.640274 4_3:-69912175 None:intergenic
GGAGCATTAGAATTACCACC+TGG 0.643311 4_3:+69911349 Msa0659500:CDS
CCAATTGGGCATGTTATTAG+GGG 0.644452 4_3:+69912770 Msa0659500:three_prime_UTR
GCTTCCTCAGAAAACAGTGG+TGG 0.648220 4_3:-69912055 None:intergenic
TATGCTGGCAAAGCTCCCAA+AGG 0.653423 4_3:+69911776 Msa0659500:CDS
AAACCTCAGATCAAGATGAA+CGG 0.656051 4_3:+69912097 Msa0659500:CDS
TGATAATAGGAACAGCTACA+GGG 0.657698 4_3:-69911438 None:intergenic
GTGCATGTCTGATCTTGGGT+AGG 0.661579 4_3:+69912611 Msa0659500:three_prime_UTR
TAAGCCGATTGGAAAGCCGA+AGG 0.696583 4_3:+69911724 Msa0659500:CDS
TGAGCTTCCTCAGAAAACAG+TGG 0.712517 4_3:-69912058 None:intergenic
TAATAGGAACAGCTACAGGG+AGG 0.713279 4_3:-69911435 None:intergenic
GGGTGAAATCTGAAGCCAGG+TGG 0.722817 4_3:-69911364 None:intergenic
TGTCAATTAAACCGGAACGG+AGG 0.723503 4_3:-69912865 None:intergenic
AATGATCTCGATTCTCAACG+AGG 0.729907 4_3:+69912740 Msa0659500:three_prime_UTR
CATTTGGTACTGATCCTGAG+GGG 0.747553 4_3:-69912341 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAATTAAATTTACTT+GGG - chr4_3:69912406-69912425 None:intergenic 10.0%
!! AATAACAAATTAAATTTACT+TGG - chr4_3:69912407-69912426 None:intergenic 10.0%
!! ATAACAAATTAAATTTACTT+GGG - chr4_3:69912406-69912425 None:intergenic 10.0%
!! AATAACAAATTAAATTTACT+TGG - chr4_3:69912407-69912426 None:intergenic 10.0%
!!! AAATCAATTTCTTTGATAAT+AGG - chr4_3:69911454-69911473 None:intergenic 15.0%
!!! ATATTTTAATGCTAATTATG+TGG + chr4_3:69911560-69911579 Msa0659500:intron 15.0%
!! ATAAAATAAAAGAATTGGTT+TGG - chr4_3:69911898-69911917 None:intergenic 15.0%
!!! TATTGATTTTTCATTAGTAT+TGG + chr4_3:69912665-69912684 Msa0659500:three_prime_UTR 15.0%
!!! AAATCAATTTCTTTGATAAT+AGG - chr4_3:69911454-69911473 None:intergenic 15.0%
!!! ATATTTTAATGCTAATTATG+TGG + chr4_3:69911560-69911579 Msa0659500:intron 15.0%
!! ATAAAATAAAAGAATTGGTT+TGG - chr4_3:69911898-69911917 None:intergenic 15.0%
!!! TATTGATTTTTCATTAGTAT+TGG + chr4_3:69912665-69912684 Msa0659500:three_prime_UTR 15.0%
!!! TTTTCGTTAGTAATAGAAAT+AGG + chr4_3:69912425-69912444 Msa0659500:three_prime_UTR 20.0%
!! AAAATTGAAAATGACCATTT+GGG + chr4_3:69912465-69912484 Msa0659500:three_prime_UTR 20.0%
!! AACCAATTTAAAAAATCCAT+GGG - chr4_3:69912519-69912538 None:intergenic 20.0%
!!! TTTTCGTTAGTAATAGAAAT+AGG + chr4_3:69912425-69912444 Msa0659500:three_prime_UTR 20.0%
!! AAAATTGAAAATGACCATTT+GGG + chr4_3:69912465-69912484 Msa0659500:three_prime_UTR 20.0%
!! AACCAATTTAAAAAATCCAT+GGG - chr4_3:69912519-69912538 None:intergenic 20.0%
! ATTTGTATAAGTTTGATCCA+TGG + chr4_3:69911470-69911489 Msa0659500:CDS 25.0%
! GTTGTATGTATTTACAGAAA+TGG + chr4_3:69911586-69911605 Msa0659500:intron 25.0%
!!! CAATTGGTTTTAATTCCTTT+GGG - chr4_3:69911794-69911813 None:intergenic 25.0%
!!! ATTGTGGTTATTTTTTGAAG+CGG - chr4_3:69911855-69911874 None:intergenic 25.0%
!!! AAATAAAAGAATTGGTTTGG+TGG - chr4_3:69911895-69911914 None:intergenic 25.0%
! AATACAAATTCATTCCACTT+GGG - chr4_3:69912250-69912269 None:intergenic 25.0%
! AAGTGGAATGAATTTGTATT+GGG + chr4_3:69912250-69912269 Msa0659500:CDS 25.0%
! AAGATTCAACTGAAAATCAA+AGG - chr4_3:69912293-69912312 None:intergenic 25.0%
!! TGATTTTCAGTTGAATCTTA+TGG + chr4_3:69912294-69912313 Msa0659500:CDS 25.0%
!! GTACCAAATGAATCAATTTT+CGG + chr4_3:69912354-69912373 Msa0659500:CDS 25.0%
!! TACCAAATGAATCAATTTTC+GGG + chr4_3:69912355-69912374 Msa0659500:CDS 25.0%
! TTAGTAATAGAAATAGGTCA+TGG + chr4_3:69912431-69912450 Msa0659500:three_prime_UTR 25.0%
! GAAAATTGAAAATGACCATT+TGG + chr4_3:69912464-69912483 Msa0659500:three_prime_UTR 25.0%
! CAACCAATTTAAAAAATCCA+TGG - chr4_3:69912520-69912539 None:intergenic 25.0%
! TGGTTGAAATTTAAGAAAAG+TGG + chr4_3:69912685-69912704 Msa0659500:three_prime_UTR 25.0%
! GGTTGAAATTTAAGAAAAGT+GGG + chr4_3:69912686-69912705 Msa0659500:three_prime_UTR 25.0%
! GTTGAAATTTAAGAAAAGTG+GGG + chr4_3:69912687-69912706 Msa0659500:three_prime_UTR 25.0%
! ATTTGTATAAGTTTGATCCA+TGG + chr4_3:69911470-69911489 Msa0659500:CDS 25.0%
! GTTGTATGTATTTACAGAAA+TGG + chr4_3:69911586-69911605 Msa0659500:intron 25.0%
!!! CAATTGGTTTTAATTCCTTT+GGG - chr4_3:69911794-69911813 None:intergenic 25.0%
!!! ATTGTGGTTATTTTTTGAAG+CGG - chr4_3:69911855-69911874 None:intergenic 25.0%
!!! AAATAAAAGAATTGGTTTGG+TGG - chr4_3:69911895-69911914 None:intergenic 25.0%
! AATACAAATTCATTCCACTT+GGG - chr4_3:69912250-69912269 None:intergenic 25.0%
! AAGTGGAATGAATTTGTATT+GGG + chr4_3:69912250-69912269 Msa0659500:CDS 25.0%
! AAGATTCAACTGAAAATCAA+AGG - chr4_3:69912293-69912312 None:intergenic 25.0%
!! TGATTTTCAGTTGAATCTTA+TGG + chr4_3:69912294-69912313 Msa0659500:CDS 25.0%
!! GTACCAAATGAATCAATTTT+CGG + chr4_3:69912354-69912373 Msa0659500:CDS 25.0%
!! TACCAAATGAATCAATTTTC+GGG + chr4_3:69912355-69912374 Msa0659500:CDS 25.0%
! TTAGTAATAGAAATAGGTCA+TGG + chr4_3:69912431-69912450 Msa0659500:three_prime_UTR 25.0%
! GAAAATTGAAAATGACCATT+TGG + chr4_3:69912464-69912483 Msa0659500:three_prime_UTR 25.0%
! CAACCAATTTAAAAAATCCA+TGG - chr4_3:69912520-69912539 None:intergenic 25.0%
! TGGTTGAAATTTAAGAAAAG+TGG + chr4_3:69912685-69912704 Msa0659500:three_prime_UTR 25.0%
! GGTTGAAATTTAAGAAAAGT+GGG + chr4_3:69912686-69912705 Msa0659500:three_prime_UTR 25.0%
! GTTGAAATTTAAGAAAAGTG+GGG + chr4_3:69912687-69912706 Msa0659500:three_prime_UTR 25.0%
!!! AAGAAGTTGTGGTTTTATAG+GGG - chr4_3:69911185-69911204 None:intergenic 30.0%
!!! GAAGAAGTTGTGGTTTTATA+GGG - chr4_3:69911186-69911205 None:intergenic 30.0%
GAAAATAAAGAGTAAGTACC+TGG - chr4_3:69911502-69911521 None:intergenic 30.0%
TTTACAGAAATGGCTCTTTA+CGG + chr4_3:69911596-69911615 Msa0659500:intron 30.0%
!!! CCAATTGGTTTTAATTCCTT+TGG - chr4_3:69911795-69911814 None:intergenic 30.0%
CCAAAGGAATTAAAACCAAT+TGG + chr4_3:69911792-69911811 Msa0659500:CDS 30.0%
ATGTACGTACTCTTAAATTG+TGG - chr4_3:69911871-69911890 None:intergenic 30.0%
! ATTAATTGCAGCTTGATGAT+TGG + chr4_3:69911975-69911994 Msa0659500:intron 30.0%
! TTAATTGCAGCTTGATGATT+GGG + chr4_3:69911976-69911995 Msa0659500:intron 30.0%
TGTCGAATTTACAACAAGAA+AGG + chr4_3:69912004-69912023 Msa0659500:CDS 30.0%
GTCGAATTTACAACAAGAAA+GGG + chr4_3:69912005-69912024 Msa0659500:CDS 30.0%
CAATACAAATTCATTCCACT+TGG - chr4_3:69912251-69912270 None:intergenic 30.0%
CAAGTGGAATGAATTTGTAT+TGG + chr4_3:69912249-69912268 Msa0659500:CDS 30.0%
! AACCCGAAAATTGATTCATT+TGG - chr4_3:69912360-69912379 None:intergenic 30.0%
!!! AAATGAATCAATTTTCGGGT+TGG + chr4_3:69912359-69912378 Msa0659500:CDS 30.0%
CAAATTAAATTTACTTGGGC+AGG - chr4_3:69912402-69912421 None:intergenic 30.0%
!!! GTCCCATGGATTTTTTAAAT+TGG + chr4_3:69912514-69912533 Msa0659500:three_prime_UTR 30.0%
AGTTGCAGTTAGTATTTGTT+TGG - chr4_3:69912572-69912591 None:intergenic 30.0%
!! TTACTAGGGTTTGTTGAATT+TGG + chr4_3:69912637-69912656 Msa0659500:three_prime_UTR 30.0%
!! TACTAGGGTTTGTTGAATTT+GGG + chr4_3:69912638-69912657 Msa0659500:three_prime_UTR 30.0%
! AGTGTTACTGTTAACATGTA+AGG + chr4_3:69912805-69912824 Msa0659500:three_prime_UTR 30.0%
CCAAAGTATGTCAATTAAAC+CGG - chr4_3:69912876-69912895 None:intergenic 30.0%
!!! AAGAAGTTGTGGTTTTATAG+GGG - chr4_3:69911185-69911204 None:intergenic 30.0%
!!! GAAGAAGTTGTGGTTTTATA+GGG - chr4_3:69911186-69911205 None:intergenic 30.0%
GAAAATAAAGAGTAAGTACC+TGG - chr4_3:69911502-69911521 None:intergenic 30.0%
TTTACAGAAATGGCTCTTTA+CGG + chr4_3:69911596-69911615 Msa0659500:intron 30.0%
!!! CCAATTGGTTTTAATTCCTT+TGG - chr4_3:69911795-69911814 None:intergenic 30.0%
CCAAAGGAATTAAAACCAAT+TGG + chr4_3:69911792-69911811 Msa0659500:CDS 30.0%
ATGTACGTACTCTTAAATTG+TGG - chr4_3:69911871-69911890 None:intergenic 30.0%
! ATTAATTGCAGCTTGATGAT+TGG + chr4_3:69911975-69911994 Msa0659500:intron 30.0%
! TTAATTGCAGCTTGATGATT+GGG + chr4_3:69911976-69911995 Msa0659500:intron 30.0%
TGTCGAATTTACAACAAGAA+AGG + chr4_3:69912004-69912023 Msa0659500:CDS 30.0%
GTCGAATTTACAACAAGAAA+GGG + chr4_3:69912005-69912024 Msa0659500:CDS 30.0%
CAATACAAATTCATTCCACT+TGG - chr4_3:69912251-69912270 None:intergenic 30.0%
CAAGTGGAATGAATTTGTAT+TGG + chr4_3:69912249-69912268 Msa0659500:CDS 30.0%
! AACCCGAAAATTGATTCATT+TGG - chr4_3:69912360-69912379 None:intergenic 30.0%
!!! AAATGAATCAATTTTCGGGT+TGG + chr4_3:69912359-69912378 Msa0659500:CDS 30.0%
CAAATTAAATTTACTTGGGC+AGG - chr4_3:69912402-69912421 None:intergenic 30.0%
!!! GTCCCATGGATTTTTTAAAT+TGG + chr4_3:69912514-69912533 Msa0659500:three_prime_UTR 30.0%
AGTTGCAGTTAGTATTTGTT+TGG - chr4_3:69912572-69912591 None:intergenic 30.0%
!! TTACTAGGGTTTGTTGAATT+TGG + chr4_3:69912637-69912656 Msa0659500:three_prime_UTR 30.0%
!! TACTAGGGTTTGTTGAATTT+GGG + chr4_3:69912638-69912657 Msa0659500:three_prime_UTR 30.0%
! AGTGTTACTGTTAACATGTA+AGG + chr4_3:69912805-69912824 Msa0659500:three_prime_UTR 30.0%
CCAAAGTATGTCAATTAAAC+CGG - chr4_3:69912876-69912895 None:intergenic 30.0%
!!! GGAAGAAGTTGTGGTTTTAT+AGG - chr4_3:69911187-69911206 None:intergenic 35.0%
TTCTTCTTCTTCTTCAGTGT+TGG - chr4_3:69911274-69911293 None:intergenic 35.0%
ATTGAATATACGCGAATGCA+AGG + chr4_3:69911328-69911347 Msa0659500:CDS 35.0%
TGATAATAGGAACAGCTACA+GGG - chr4_3:69911441-69911460 None:intergenic 35.0%
! TTGATAATAGGAACAGCTAC+AGG - chr4_3:69911442-69911461 None:intergenic 35.0%
!!! AGTGGTATTTTTTCTCTCCA+AGG + chr4_3:69911627-69911646 Msa0659500:CDS 35.0%
!!! GTGGTATTTTTTCTCTCCAA+GGG + chr4_3:69911628-69911647 Msa0659500:CDS 35.0%
TTTGGATATTTACGATCCCT+TGG - chr4_3:69911647-69911666 None:intergenic 35.0%
AGGGATCGTAAATATCCAAA+CGG + chr4_3:69911647-69911666 Msa0659500:CDS 35.0%
GTAAATATCCAAACGGTTCA+AGG + chr4_3:69911654-69911673 Msa0659500:CDS 35.0%
!! AAAGCACTTGTTTTCTATGC+TGG + chr4_3:69911761-69911780 Msa0659500:CDS 35.0%
ATACTCATGCATGATCCAAT+TGG - chr4_3:69911810-69911829 None:intergenic 35.0%
AAACCTCAGATCAAGATGAA+CGG + chr4_3:69912097-69912116 Msa0659500:CDS 35.0%
CACTATTCCTAAAATCATCC+TGG - chr4_3:69912123-69912142 None:intergenic 35.0%
GAAAATCAAAGGCTGAAACT+GGG - chr4_3:69912282-69912301 None:intergenic 35.0%
TGAAAATCAAAGGCTGAAAC+TGG - chr4_3:69912283-69912302 None:intergenic 35.0%
CAGTTGAATCTTATGGATGA+TGG + chr4_3:69912301-69912320 Msa0659500:CDS 35.0%
AATAGAAATAGGTCATGGTC+TGG + chr4_3:69912436-69912455 Msa0659500:three_prime_UTR 35.0%
ATAGAAATAGGTCATGGTCT+GGG + chr4_3:69912437-69912456 Msa0659500:three_prime_UTR 35.0%
ATTGAAAATGACCATTTGGG+AGG + chr4_3:69912468-69912487 Msa0659500:three_prime_UTR 35.0%
AGGATTAGGGATCCTAAAAT+TGG + chr4_3:69912488-69912507 Msa0659500:three_prime_UTR 35.0%
ATTAGGGATCCTAAAATTGG+AGG + chr4_3:69912491-69912510 Msa0659500:three_prime_UTR 35.0%
TTAGGGATCCTAAAATTGGA+GGG + chr4_3:69912492-69912511 Msa0659500:three_prime_UTR 35.0%
GCAGTTAGTATTTGTTTGGT+AGG - chr4_3:69912568-69912587 None:intergenic 35.0%
ATCCAATTGGGCATGTTATT+AGG + chr4_3:69912768-69912787 Msa0659500:three_prime_UTR 35.0%
TCCAATTGGGCATGTTATTA+GGG + chr4_3:69912769-69912788 Msa0659500:three_prime_UTR 35.0%
AACGGAGGTAGTAATAGAAA+TGG - chr4_3:69912853-69912872 None:intergenic 35.0%
GTATGTCAATTAAACCGGAA+CGG - chr4_3:69912871-69912890 None:intergenic 35.0%
CCGGTTTAATTGACATACTT+TGG + chr4_3:69912873-69912892 Msa0659500:three_prime_UTR 35.0%
!!! GGAAGAAGTTGTGGTTTTAT+AGG - chr4_3:69911187-69911206 None:intergenic 35.0%
TTCTTCTTCTTCTTCAGTGT+TGG - chr4_3:69911274-69911293 None:intergenic 35.0%
ATTGAATATACGCGAATGCA+AGG + chr4_3:69911328-69911347 Msa0659500:CDS 35.0%
TGATAATAGGAACAGCTACA+GGG - chr4_3:69911441-69911460 None:intergenic 35.0%
! TTGATAATAGGAACAGCTAC+AGG - chr4_3:69911442-69911461 None:intergenic 35.0%
!!! AGTGGTATTTTTTCTCTCCA+AGG + chr4_3:69911627-69911646 Msa0659500:CDS 35.0%
!!! GTGGTATTTTTTCTCTCCAA+GGG + chr4_3:69911628-69911647 Msa0659500:CDS 35.0%
TTTGGATATTTACGATCCCT+TGG - chr4_3:69911647-69911666 None:intergenic 35.0%
AGGGATCGTAAATATCCAAA+CGG + chr4_3:69911647-69911666 Msa0659500:CDS 35.0%
GTAAATATCCAAACGGTTCA+AGG + chr4_3:69911654-69911673 Msa0659500:CDS 35.0%
!! AAAGCACTTGTTTTCTATGC+TGG + chr4_3:69911761-69911780 Msa0659500:CDS 35.0%
ATACTCATGCATGATCCAAT+TGG - chr4_3:69911810-69911829 None:intergenic 35.0%
AAACCTCAGATCAAGATGAA+CGG + chr4_3:69912097-69912116 Msa0659500:CDS 35.0%
CACTATTCCTAAAATCATCC+TGG - chr4_3:69912123-69912142 None:intergenic 35.0%
GAAAATCAAAGGCTGAAACT+GGG - chr4_3:69912282-69912301 None:intergenic 35.0%
TGAAAATCAAAGGCTGAAAC+TGG - chr4_3:69912283-69912302 None:intergenic 35.0%
CAGTTGAATCTTATGGATGA+TGG + chr4_3:69912301-69912320 Msa0659500:CDS 35.0%
AATAGAAATAGGTCATGGTC+TGG + chr4_3:69912436-69912455 Msa0659500:three_prime_UTR 35.0%
ATAGAAATAGGTCATGGTCT+GGG + chr4_3:69912437-69912456 Msa0659500:three_prime_UTR 35.0%
ATTGAAAATGACCATTTGGG+AGG + chr4_3:69912468-69912487 Msa0659500:three_prime_UTR 35.0%
AGGATTAGGGATCCTAAAAT+TGG + chr4_3:69912488-69912507 Msa0659500:three_prime_UTR 35.0%
ATTAGGGATCCTAAAATTGG+AGG + chr4_3:69912491-69912510 Msa0659500:three_prime_UTR 35.0%
TTAGGGATCCTAAAATTGGA+GGG + chr4_3:69912492-69912511 Msa0659500:three_prime_UTR 35.0%
GCAGTTAGTATTTGTTTGGT+AGG - chr4_3:69912568-69912587 None:intergenic 35.0%
ATCCAATTGGGCATGTTATT+AGG + chr4_3:69912768-69912787 Msa0659500:three_prime_UTR 35.0%
TCCAATTGGGCATGTTATTA+GGG + chr4_3:69912769-69912788 Msa0659500:three_prime_UTR 35.0%
AACGGAGGTAGTAATAGAAA+TGG - chr4_3:69912853-69912872 None:intergenic 35.0%
GTATGTCAATTAAACCGGAA+CGG - chr4_3:69912871-69912890 None:intergenic 35.0%
CCGGTTTAATTGACATACTT+TGG + chr4_3:69912873-69912892 Msa0659500:three_prime_UTR 35.0%
!!! GTTGTGGTTTTATAGGGGAT+AGG - chr4_3:69911180-69911199 None:intergenic 40.0%
TGTGAGAAAGGAAGAAGTTG+TGG - chr4_3:69911196-69911215 None:intergenic 40.0%
TGAGTTCGAAGTTGTGAGAA+AGG - chr4_3:69911208-69911227 None:intergenic 40.0%
!! TCTTCTTCTTCAGTGTTGGT+TGG - chr4_3:69911270-69911289 None:intergenic 40.0%
TTGACAAGCTCATCATCAGT+CGG - chr4_3:69911388-69911407 None:intergenic 40.0%
AGCCATACACTTCTGATTGA+AGG + chr4_3:69911524-69911543 Msa0659500:intron 40.0%
! AGCCTTCAATCAGAAGTGTA+TGG - chr4_3:69911529-69911548 None:intergenic 40.0%
TTCTTTATCCCAAGTGCCTT+CGG - chr4_3:69911743-69911762 None:intergenic 40.0%
! TAAACCACCACTGTTTTCTG+AGG + chr4_3:69912051-69912070 Msa0659500:CDS 40.0%
GTACACTGACACATCAGATT+CGG + chr4_3:69912150-69912169 Msa0659500:CDS 40.0%
CTTTGAACTTCCTTATCGCA+CGG - chr4_3:69912223-69912242 None:intergenic 40.0%
!! TCATTTGGTACTGATCCTGA+GGG - chr4_3:69912345-69912364 None:intergenic 40.0%
!! TTCATTTGGTACTGATCCTG+AGG - chr4_3:69912346-69912365 None:intergenic 40.0%
TAGAAATAGGTCATGGTCTG+GGG + chr4_3:69912438-69912457 Msa0659500:three_prime_UTR 40.0%
AATGACCATTTGGGAGGATT+AGG + chr4_3:69912474-69912493 Msa0659500:three_prime_UTR 40.0%
ATGACCATTTGGGAGGATTA+GGG + chr4_3:69912475-69912494 Msa0659500:three_prime_UTR 40.0%
ATACTAACTGCAACTGCAAG+TGG + chr4_3:69912577-69912596 Msa0659500:three_prime_UTR 40.0%
TAATGGTGCATGTCTGATCT+TGG + chr4_3:69912606-69912625 Msa0659500:three_prime_UTR 40.0%
AATGGTGCATGTCTGATCTT+GGG + chr4_3:69912607-69912626 Msa0659500:three_prime_UTR 40.0%
ATCTTGGGTAGGTGATTACT+AGG + chr4_3:69912622-69912641 Msa0659500:three_prime_UTR 40.0%
TCTTGGGTAGGTGATTACTA+GGG + chr4_3:69912623-69912642 Msa0659500:three_prime_UTR 40.0%
AATGATCTCGATTCTCAACG+AGG + chr4_3:69912740-69912759 Msa0659500:three_prime_UTR 40.0%
AACGAGGTGTAGATCCAATT+GGG + chr4_3:69912756-69912775 Msa0659500:three_prime_UTR 40.0%
CCAATTGGGCATGTTATTAG+GGG + chr4_3:69912770-69912789 Msa0659500:three_prime_UTR 40.0%
! GGCATGTTATTAGGGGTATA+TGG + chr4_3:69912777-69912796 Msa0659500:three_prime_UTR 40.0%
TTCTATTACTACCTCCGTTC+CGG + chr4_3:69912854-69912873 Msa0659500:three_prime_UTR 40.0%
!!! GTTGTGGTTTTATAGGGGAT+AGG - chr4_3:69911180-69911199 None:intergenic 40.0%
TGTGAGAAAGGAAGAAGTTG+TGG - chr4_3:69911196-69911215 None:intergenic 40.0%
TGAGTTCGAAGTTGTGAGAA+AGG - chr4_3:69911208-69911227 None:intergenic 40.0%
!! TCTTCTTCTTCAGTGTTGGT+TGG - chr4_3:69911270-69911289 None:intergenic 40.0%
TTGACAAGCTCATCATCAGT+CGG - chr4_3:69911388-69911407 None:intergenic 40.0%
AGCCATACACTTCTGATTGA+AGG + chr4_3:69911524-69911543 Msa0659500:intron 40.0%
! AGCCTTCAATCAGAAGTGTA+TGG - chr4_3:69911529-69911548 None:intergenic 40.0%
TTCTTTATCCCAAGTGCCTT+CGG - chr4_3:69911743-69911762 None:intergenic 40.0%
! TAAACCACCACTGTTTTCTG+AGG + chr4_3:69912051-69912070 Msa0659500:CDS 40.0%
GTACACTGACACATCAGATT+CGG + chr4_3:69912150-69912169 Msa0659500:CDS 40.0%
CTTTGAACTTCCTTATCGCA+CGG - chr4_3:69912223-69912242 None:intergenic 40.0%
!! TCATTTGGTACTGATCCTGA+GGG - chr4_3:69912345-69912364 None:intergenic 40.0%
!! TTCATTTGGTACTGATCCTG+AGG - chr4_3:69912346-69912365 None:intergenic 40.0%
TAGAAATAGGTCATGGTCTG+GGG + chr4_3:69912438-69912457 Msa0659500:three_prime_UTR 40.0%
AATGACCATTTGGGAGGATT+AGG + chr4_3:69912474-69912493 Msa0659500:three_prime_UTR 40.0%
ATGACCATTTGGGAGGATTA+GGG + chr4_3:69912475-69912494 Msa0659500:three_prime_UTR 40.0%
ATACTAACTGCAACTGCAAG+TGG + chr4_3:69912577-69912596 Msa0659500:three_prime_UTR 40.0%
TAATGGTGCATGTCTGATCT+TGG + chr4_3:69912606-69912625 Msa0659500:three_prime_UTR 40.0%
AATGGTGCATGTCTGATCTT+GGG + chr4_3:69912607-69912626 Msa0659500:three_prime_UTR 40.0%
ATCTTGGGTAGGTGATTACT+AGG + chr4_3:69912622-69912641 Msa0659500:three_prime_UTR 40.0%
TCTTGGGTAGGTGATTACTA+GGG + chr4_3:69912623-69912642 Msa0659500:three_prime_UTR 40.0%
AATGATCTCGATTCTCAACG+AGG + chr4_3:69912740-69912759 Msa0659500:three_prime_UTR 40.0%
AACGAGGTGTAGATCCAATT+GGG + chr4_3:69912756-69912775 Msa0659500:three_prime_UTR 40.0%
CCAATTGGGCATGTTATTAG+GGG + chr4_3:69912770-69912789 Msa0659500:three_prime_UTR 40.0%
! GGCATGTTATTAGGGGTATA+TGG + chr4_3:69912777-69912796 Msa0659500:three_prime_UTR 40.0%
TTCTATTACTACCTCCGTTC+CGG + chr4_3:69912854-69912873 Msa0659500:three_prime_UTR 40.0%
GCTGCTAGGGTAGTTAGTAT+TGG - chr4_3:69911245-69911264 None:intergenic 45.0%
!! TCTTCTTCAGTGTTGGTTGG+TGG - chr4_3:69911267-69911286 None:intergenic 45.0%
! GGAGCATTAGAATTACCACC+TGG + chr4_3:69911349-69911368 Msa0659500:CDS 45.0%
TGACAAGCTCATCATCAGTC+GGG - chr4_3:69911387-69911406 None:intergenic 45.0%
AATAGGAACAGCTACAGGGA+GGG - chr4_3:69911437-69911456 None:intergenic 45.0%
TAATAGGAACAGCTACAGGG+AGG - chr4_3:69911438-69911457 None:intergenic 45.0%
TTTGATCCATGGCATCTTCC+AGG + chr4_3:69911481-69911500 Msa0659500:CDS 45.0%
TAAGTACCTGGAAGATGCCA+TGG - chr4_3:69911490-69911509 None:intergenic 45.0%
CTCTTTACGGTGAGAAAGAG+TGG + chr4_3:69911609-69911628 Msa0659500:CDS 45.0%
TGAGCTTCCTCAGAAAACAG+TGG - chr4_3:69912061-69912080 None:intergenic 45.0%
! TGAACGGCCAGGATGATTTT+AGG + chr4_3:69912113-69912132 Msa0659500:CDS 45.0%
AAGTTCAAAGTGAGCCCAAG+TGG + chr4_3:69912233-69912252 Msa0659500:CDS 45.0%
!! CATTTGGTACTGATCCTGAG+GGG - chr4_3:69912344-69912363 None:intergenic 45.0%
ACTGCAAGTGGAGCTTCTAA+TGG + chr4_3:69912589-69912608 Msa0659500:three_prime_UTR 45.0%
CAACGAGGTGTAGATCCAAT+TGG + chr4_3:69912755-69912774 Msa0659500:three_prime_UTR 45.0%
CCCCTAATAACATGCCCAAT+TGG - chr4_3:69912773-69912792 None:intergenic 45.0%
TGTCAATTAAACCGGAACGG+AGG - chr4_3:69912868-69912887 None:intergenic 45.0%
!!! GTGGTTTTATAGGGGATAGG+AGG - chr4_3:69911177-69911196 None:intergenic 45.0%
GCTGCTAGGGTAGTTAGTAT+TGG - chr4_3:69911245-69911264 None:intergenic 45.0%
!! TCTTCTTCAGTGTTGGTTGG+TGG - chr4_3:69911267-69911286 None:intergenic 45.0%
! GGAGCATTAGAATTACCACC+TGG + chr4_3:69911349-69911368 Msa0659500:CDS 45.0%
TGACAAGCTCATCATCAGTC+GGG - chr4_3:69911387-69911406 None:intergenic 45.0%
AATAGGAACAGCTACAGGGA+GGG - chr4_3:69911437-69911456 None:intergenic 45.0%
TAATAGGAACAGCTACAGGG+AGG - chr4_3:69911438-69911457 None:intergenic 45.0%
TTTGATCCATGGCATCTTCC+AGG + chr4_3:69911481-69911500 Msa0659500:CDS 45.0%
TAAGTACCTGGAAGATGCCA+TGG - chr4_3:69911490-69911509 None:intergenic 45.0%
CTCTTTACGGTGAGAAAGAG+TGG + chr4_3:69911609-69911628 Msa0659500:CDS 45.0%
TGAGCTTCCTCAGAAAACAG+TGG - chr4_3:69912061-69912080 None:intergenic 45.0%
! TGAACGGCCAGGATGATTTT+AGG + chr4_3:69912113-69912132 Msa0659500:CDS 45.0%
AAGTTCAAAGTGAGCCCAAG+TGG + chr4_3:69912233-69912252 Msa0659500:CDS 45.0%
!! CATTTGGTACTGATCCTGAG+GGG - chr4_3:69912344-69912363 None:intergenic 45.0%
ACTGCAAGTGGAGCTTCTAA+TGG + chr4_3:69912589-69912608 Msa0659500:three_prime_UTR 45.0%
CAACGAGGTGTAGATCCAAT+TGG + chr4_3:69912755-69912774 Msa0659500:three_prime_UTR 45.0%
CCCCTAATAACATGCCCAAT+TGG - chr4_3:69912773-69912792 None:intergenic 45.0%
TGTCAATTAAACCGGAACGG+AGG - chr4_3:69912868-69912887 None:intergenic 45.0%
!! AAAAAATAAAATAAAAGAAT+TGG - chr4_3:69911903-69911922 None:intergenic 5.0%
!! AAAAAATAAAATAAAAGAAT+TGG - chr4_3:69911903-69911922 None:intergenic 5.0%
! TCCAATCGGCTTATCAGCTC+CGG - chr4_3:69911717-69911736 None:intergenic 50.0%
TAAGCCGATTGGAAAGCCGA+AGG + chr4_3:69911724-69911743 Msa0659500:CDS 50.0%
AGTGCCTTCGGCTTTCCAAT+CGG - chr4_3:69911731-69911750 None:intergenic 50.0%
!! ATTGGAAAGCCGAAGGCACT+TGG + chr4_3:69911731-69911750 Msa0659500:CDS 50.0%
!! TTGGAAAGCCGAAGGCACTT+GGG + chr4_3:69911732-69911751 Msa0659500:CDS 50.0%
TATGCTGGCAAAGCTCCCAA+AGG + chr4_3:69911776-69911795 Msa0659500:CDS 50.0%
GCTTCCTCAGAAAACAGTGG+TGG - chr4_3:69912058-69912077 None:intergenic 50.0%
TGGCCGTTCATCTTGATCTG+AGG - chr4_3:69912103-69912122 None:intergenic 50.0%
TCAGATCAAGATGAACGGCC+AGG + chr4_3:69912102-69912121 Msa0659500:CDS 50.0%
!! ACACATCAGATTCGGTGCCA+CGG + chr4_3:69912158-69912177 Msa0659500:CDS 50.0%
CAAAGGCTGAAACTGGGTCT+GGG - chr4_3:69912276-69912295 None:intergenic 50.0%
TCAAAGGCTGAAACTGGGTC+TGG - chr4_3:69912277-69912296 None:intergenic 50.0%
ACTGATCCTGAGGGGCAAAA+GGG - chr4_3:69912336-69912355 None:intergenic 50.0%
TACTGATCCTGAGGGGCAAA+AGG - chr4_3:69912337-69912356 None:intergenic 50.0%
GGATCCCTAATCCTCCCAAA+TGG - chr4_3:69912482-69912501 None:intergenic 50.0%
! CCATGGGACCCTCCAATTTT+AGG - chr4_3:69912503-69912522 None:intergenic 50.0%
CCTAAAATTGGAGGGTCCCA+TGG + chr4_3:69912500-69912519 Msa0659500:three_prime_UTR 50.0%
GTGCATGTCTGATCTTGGGT+AGG + chr4_3:69912611-69912630 Msa0659500:three_prime_UTR 50.0%
! TCCAATCGGCTTATCAGCTC+CGG - chr4_3:69911717-69911736 None:intergenic 50.0%
TAAGCCGATTGGAAAGCCGA+AGG + chr4_3:69911724-69911743 Msa0659500:CDS 50.0%
AGTGCCTTCGGCTTTCCAAT+CGG - chr4_3:69911731-69911750 None:intergenic 50.0%
!! ATTGGAAAGCCGAAGGCACT+TGG + chr4_3:69911731-69911750 Msa0659500:CDS 50.0%
!! TTGGAAAGCCGAAGGCACTT+GGG + chr4_3:69911732-69911751 Msa0659500:CDS 50.0%
TATGCTGGCAAAGCTCCCAA+AGG + chr4_3:69911776-69911795 Msa0659500:CDS 50.0%
GCTTCCTCAGAAAACAGTGG+TGG - chr4_3:69912058-69912077 None:intergenic 50.0%
TGGCCGTTCATCTTGATCTG+AGG - chr4_3:69912103-69912122 None:intergenic 50.0%
TCAGATCAAGATGAACGGCC+AGG + chr4_3:69912102-69912121 Msa0659500:CDS 50.0%
!! ACACATCAGATTCGGTGCCA+CGG + chr4_3:69912158-69912177 Msa0659500:CDS 50.0%
CAAAGGCTGAAACTGGGTCT+GGG - chr4_3:69912276-69912295 None:intergenic 50.0%
TCAAAGGCTGAAACTGGGTC+TGG - chr4_3:69912277-69912296 None:intergenic 50.0%
ACTGATCCTGAGGGGCAAAA+GGG - chr4_3:69912336-69912355 None:intergenic 50.0%
TACTGATCCTGAGGGGCAAA+AGG - chr4_3:69912337-69912356 None:intergenic 50.0%
GGATCCCTAATCCTCCCAAA+TGG - chr4_3:69912482-69912501 None:intergenic 50.0%
! CCATGGGACCCTCCAATTTT+AGG - chr4_3:69912503-69912522 None:intergenic 50.0%
CCTAAAATTGGAGGGTCCCA+TGG + chr4_3:69912500-69912519 Msa0659500:three_prime_UTR 50.0%
GTGCATGTCTGATCTTGGGT+AGG + chr4_3:69912611-69912630 Msa0659500:three_prime_UTR 50.0%
!! GTGTTGGTTGGTGGCTGCTA+GGG - chr4_3:69911258-69911277 None:intergenic 55.0%
!! AGTGTTGGTTGGTGGCTGCT+AGG - chr4_3:69911259-69911278 None:intergenic 55.0%
! GGGTGAAATCTGAAGCCAGG+TGG - chr4_3:69911367-69911386 None:intergenic 55.0%
! GTCGGGTGAAATCTGAAGCC+AGG - chr4_3:69911370-69911389 None:intergenic 55.0%
CAAACGGTTCAAGGCCGAAC+CGG + chr4_3:69911663-69911682 Msa0659500:CDS 55.0%
AAACGGTTCAAGGCCGAACC+GGG + chr4_3:69911664-69911683 Msa0659500:CDS 55.0%
TGCGGGAACCGGATATTGGA+AGG + chr4_3:69911688-69911707 Msa0659500:CDS 55.0%
ACCGGATATTGGAAGGCGAC+CGG + chr4_3:69911695-69911714 Msa0659500:CDS 55.0%
TCCGGTCGCCTTCCAATATC+CGG - chr4_3:69911699-69911718 None:intergenic 55.0%
ACCGGAGCTGATAAGCCGAT+TGG + chr4_3:69911713-69911732 Msa0659500:CDS 55.0%
CTTGAGTCGGTGTGAAACCG+TGG - chr4_3:69912178-69912197 None:intergenic 55.0%
!! CGGTTTCACACCGACTCAAG+CGG + chr4_3:69912178-69912197 Msa0659500:CDS 55.0%
GTGCTCAGAACCGCTTGAGT+CGG - chr4_3:69912191-69912210 None:intergenic 55.0%
CGTGGTTTCACCGTGCGATA+AGG + chr4_3:69912210-69912229 Msa0659500:CDS 55.0%
! AGATGACCCTTTTGCCCCTC+AGG + chr4_3:69912327-69912346 Msa0659500:CDS 55.0%
!! GTGTTGGTTGGTGGCTGCTA+GGG - chr4_3:69911258-69911277 None:intergenic 55.0%
!! AGTGTTGGTTGGTGGCTGCT+AGG - chr4_3:69911259-69911278 None:intergenic 55.0%
! GGGTGAAATCTGAAGCCAGG+TGG - chr4_3:69911367-69911386 None:intergenic 55.0%
! GTCGGGTGAAATCTGAAGCC+AGG - chr4_3:69911370-69911389 None:intergenic 55.0%
CAAACGGTTCAAGGCCGAAC+CGG + chr4_3:69911663-69911682 Msa0659500:CDS 55.0%
AAACGGTTCAAGGCCGAACC+GGG + chr4_3:69911664-69911683 Msa0659500:CDS 55.0%
TGCGGGAACCGGATATTGGA+AGG + chr4_3:69911688-69911707 Msa0659500:CDS 55.0%
ACCGGATATTGGAAGGCGAC+CGG + chr4_3:69911695-69911714 Msa0659500:CDS 55.0%
TCCGGTCGCCTTCCAATATC+CGG - chr4_3:69911699-69911718 None:intergenic 55.0%
ACCGGAGCTGATAAGCCGAT+TGG + chr4_3:69911713-69911732 Msa0659500:CDS 55.0%
CTTGAGTCGGTGTGAAACCG+TGG - chr4_3:69912178-69912197 None:intergenic 55.0%
!! CGGTTTCACACCGACTCAAG+CGG + chr4_3:69912178-69912197 Msa0659500:CDS 55.0%
GTGCTCAGAACCGCTTGAGT+CGG - chr4_3:69912191-69912210 None:intergenic 55.0%
CGTGGTTTCACCGTGCGATA+AGG + chr4_3:69912210-69912229 Msa0659500:CDS 55.0%
! AGATGACCCTTTTGCCCCTC+AGG + chr4_3:69912327-69912346 Msa0659500:CDS 55.0%
! CGGTTCGGCCTTGAACCGTT+TGG - chr4_3:69911665-69911684 None:intergenic 60.0%
AATATCCGGTTCCCGCAGCC+CGG - chr4_3:69911685-69911704 None:intergenic 60.0%
!! CTCAAGCGGTTCTGAGCACG+TGG + chr4_3:69912192-69912211 Msa0659500:CDS 60.0%
! CGGTTCGGCCTTGAACCGTT+TGG - chr4_3:69911665-69911684 None:intergenic 60.0%
AATATCCGGTTCCCGCAGCC+CGG - chr4_3:69911685-69911704 None:intergenic 60.0%
!! CTCAAGCGGTTCTGAGCACG+TGG + chr4_3:69912192-69912211 Msa0659500:CDS 60.0%
TTCAAGGCCGAACCGGGCTG+CGG + chr4_3:69911670-69911689 Msa0659500:CDS 65.0%
GGGCTGCGGGAACCGGATAT+TGG + chr4_3:69911684-69911703 Msa0659500:CDS 65.0%
TTCAAGGCCGAACCGGGCTG+CGG + chr4_3:69911670-69911689 Msa0659500:CDS 65.0%
GGGCTGCGGGAACCGGATAT+TGG + chr4_3:69911684-69911703 Msa0659500:CDS 65.0%
TCAAGGCCGAACCGGGCTGC+GGG + chr4_3:69911671-69911690 Msa0659500:CDS 70.0%
TCAAGGCCGAACCGGGCTGC+GGG + chr4_3:69911671-69911690 Msa0659500:CDS 70.0%
CCGGTTCCCGCAGCCCGGTT+CGG - chr4_3:69911680-69911699 None:intergenic 75.0%
CCGAACCGGGCTGCGGGAAC+CGG + chr4_3:69911677-69911696 Msa0659500:CDS 75.0%
CCGGTTCCCGCAGCCCGGTT+CGG - chr4_3:69911680-69911699 None:intergenic 75.0%
CCGAACCGGGCTGCGGGAAC+CGG + chr4_3:69911677-69911696 Msa0659500:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 69911175 69912901 69911175 ID=Msa0659500;Name=Msa0659500
chr4_3 mRNA 69911175 69912901 69911175 ID=Msa0659500-mRNA-1;Parent=Msa0659500;Name=Msa0659500-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|1|1|1|1|3|490|343
chr4_3 exon 69911175 69911502 69911175 ID=Msa0659500-mRNA-1:exon:20600;Parent=Msa0659500-mRNA-1
chr4_3 exon 69911603 69911880 69911603 ID=Msa0659500-mRNA-1:exon:20601;Parent=Msa0659500-mRNA-1
chr4_3 exon 69911986 69912901 69911986 ID=Msa0659500-mRNA-1:exon:20602;Parent=Msa0659500-mRNA-1
chr4_3 CDS 69911175 69911502 69911175 ID=Msa0659500-mRNA-1:cds;Parent=Msa0659500-mRNA-1
chr4_3 CDS 69911603 69911880 69911603 ID=Msa0659500-mRNA-1:cds;Parent=Msa0659500-mRNA-1
chr4_3 CDS 69911986 69912411 69911986 ID=Msa0659500-mRNA-1:cds;Parent=Msa0659500-mRNA-1
chr4_3 three_prime_UTR 69912412 69912901 69912412 ID=Msa0659500-mRNA-1:three_prime_utr;Parent=Msa0659500-mRNA-1
Gene Sequence

>Msa0659500

CTCCTATCCCCTATAAAACCACAACTTCTTCCTTTCTCACAACTTCGAACTCACTTCAATATCATATCCAATACTAACTACCCTAGCAGCCACCAACCAACACTGAAGAAGAAGAAGAAAAAGAACAATAGTACGTATAGTATCAAGAAATTAATTGAATATACGCGAATGCAAGGAGCATTAGAATTACCACCTGGCTTCAGATTTCACCCGACTGATGATGAGCTTGTCAATCACTACTTGTGTAGAAAGTGTGCTTCCCTCCCTGTAGCTGTTCCTATTATCAAAGAAATTGATTTGTATAAGTTTGATCCATGGCATCTTCCAGAAATGGCTCTTTACGGTGAGAAAGAGTGGTATTTTTTCTCTCCAAGGGATCGTAAATATCCAAACGGTTCAAGGCCGAACCGGGCTGCGGGAACCGGATATTGGAAGGCGACCGGAGCTGATAAGCCGATTGGAAAGCCGAAGGCACTTGGGATAAAGAAAGCACTTGTTTTCTATGCTGGCAAAGCTCCCAAAGGAATTAAAACCAATTGGATCATGCATGAGTATCGTCTTGCTAATGTTGATAGATCCGCTTCAAAAAATAACCACAATTTAAGACTTGATGATTGGGTCTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAATCACACTAAACCACCACTGTTTTCTGAGGAAGCTCAATTTGAGAATGAGACAAAACCTCAGATCAAGATGAACGGCCAGGATGATTTTAGGAATAGTGATCAATTGTACACTGACACATCAGATTCGGTGCCACGGTTTCACACCGACTCAAGCGGTTCTGAGCACGTGGTTTCACCGTGCGATAAGGAAGTTCAAAGTGAGCCCAAGTGGAATGAATTTGTATTGGGCCCAGACCCAGTTTCAGCCTTTGATTTTCAGTTGAATCTTATGGATGATGGTGAAGATGACCCTTTTGCCCCTCAGGATCAGTACCAAATGAATCAATTTTCGGGTTGGCAAGATGTGTTTATGTACCTGCCCAAGTAA
Protein sequence

>Msa0659500

LLSPIKPQLLPFSQLRTHFNIISNTNYPSSHQPTLKKKKKKNNSTYSIKKLIEYTRMQGALELPPGFRFHPTDDELVNHYLCRKCASLPVAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASKNNHNLRLDDWVLCRIYNKKGKIEKYNHTKPPLFSEEAQFENETKPQIKMNGQDDFRNSDQLYTDTSDSVPRFHTDSSGSEHVVSPCDKEVQSEPKWNEFVLGPDPVSAFDFQLNLMDDGEDDPFAPQDQYQMNQFSGWQDVFMYLPK*