Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570670 | KEH30835.1 | 95.325 | 385 | 18 | 0 | 1 | 385 | 1 | 385 | 0.0 | 747 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570670 | sp|Q9ZQG9|E1314_ARATH | 51.020 | 343 | 161 | 2 | 33 | 374 | 30 | 366 | 1.46e-120 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570670 | A0A072UYA7 | 95.325 | 385 | 18 | 0 | 1 | 385 | 1 | 385 | 0.0 | 747 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0570670 | Msa0610760 | 0.874466 | 6.606445e-68 | -8.615850e-47 |
| Msa0570670 | Msa0693470 | 0.909757 | 3.998830e-82 | -8.615850e-47 |
| Msa0570670 | Msa1404570 | 0.830374 | 3.043642e-55 | -8.615850e-47 |
| Msa0570670 | Msa1437520 | 0.887417 | 1.453710e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570670 | MtrunA17_Chr4g0043851 | 93.782 | 386 | 24 | 0 | 1 | 386 | 1 | 386 | 0.0 | 740 |
| Msa0570670 | MtrunA17_Chr2g0285901 | 75.811 | 339 | 76 | 2 | 12 | 350 | 9 | 341 | 0.0 | 539 |
| Msa0570670 | MtrunA17_Chr1g0189111 | 56.535 | 329 | 142 | 1 | 23 | 351 | 22 | 349 | 8.68e-137 | 397 |
| Msa0570670 | MtrunA17_Chr4g0026321 | 52.941 | 323 | 152 | 0 | 31 | 353 | 28 | 350 | 7.36e-126 | 368 |
| Msa0570670 | MtrunA17_Chr2g0321511 | 50.000 | 338 | 167 | 1 | 13 | 350 | 10 | 345 | 6.81e-122 | 358 |
| Msa0570670 | MtrunA17_Chr4g0003281 | 48.235 | 340 | 175 | 1 | 27 | 365 | 35 | 374 | 4.38e-117 | 346 |
| Msa0570670 | MtrunA17_Chr4g0064021 | 45.732 | 328 | 177 | 1 | 27 | 353 | 21 | 348 | 1.15e-102 | 309 |
| Msa0570670 | MtrunA17_Chr5g0439251 | 49.538 | 325 | 161 | 3 | 29 | 351 | 22 | 345 | 1.69e-99 | 304 |
| Msa0570670 | MtrunA17_Chr3g0144531 | 45.299 | 351 | 190 | 2 | 14 | 362 | 9 | 359 | 4.63e-99 | 302 |
| Msa0570670 | MtrunA17_Chr4g0034901 | 45.014 | 351 | 191 | 2 | 14 | 362 | 10 | 360 | 4.96e-98 | 300 |
| Msa0570670 | MtrunA17_Chr1g0155001 | 45.963 | 322 | 172 | 2 | 32 | 351 | 24 | 345 | 7.18e-96 | 293 |
| Msa0570670 | MtrunA17_Chr3g0119541 | 45.217 | 345 | 181 | 4 | 25 | 362 | 19 | 362 | 2.02e-95 | 290 |
| Msa0570670 | MtrunA17_Chr1g0177171 | 45.706 | 326 | 174 | 3 | 28 | 351 | 34 | 358 | 2.24e-95 | 294 |
| Msa0570670 | MtrunA17_Chr1g0146831 | 45.988 | 324 | 169 | 3 | 26 | 347 | 25 | 344 | 7.35e-93 | 283 |
| Msa0570670 | MtrunA17_Chr8g0389741 | 42.899 | 345 | 192 | 3 | 8 | 348 | 1 | 344 | 1.00e-88 | 277 |
| Msa0570670 | MtrunA17_Chr6g0487261 | 42.982 | 342 | 193 | 2 | 33 | 373 | 28 | 368 | 2.17e-87 | 273 |
| Msa0570670 | MtrunA17_Chr7g0234821 | 42.769 | 325 | 180 | 5 | 33 | 352 | 27 | 350 | 3.33e-86 | 269 |
| Msa0570670 | MtrunA17_Chr7g0223961 | 44.136 | 324 | 173 | 5 | 29 | 350 | 20 | 337 | 3.12e-85 | 266 |
| Msa0570670 | MtrunA17_Chr8g0339191 | 40.923 | 325 | 186 | 5 | 33 | 352 | 30 | 353 | 4.10e-81 | 256 |
| Msa0570670 | MtrunA17_Chr4g0046311 | 39.210 | 329 | 192 | 5 | 30 | 351 | 21 | 348 | 1.92e-77 | 247 |
| Msa0570670 | MtrunA17_Chr4g0043511 | 41.667 | 348 | 194 | 7 | 7 | 350 | 37 | 379 | 3.76e-77 | 248 |
| Msa0570670 | MtrunA17_Chr3g0121271 | 38.658 | 313 | 187 | 3 | 30 | 338 | 24 | 335 | 8.98e-77 | 246 |
| Msa0570670 | MtrunA17_Chr4g0075031 | 39.144 | 327 | 194 | 3 | 32 | 354 | 45 | 370 | 8.54e-75 | 241 |
| Msa0570670 | MtrunA17_Chr8g0378621 | 36.443 | 343 | 208 | 4 | 8 | 346 | 7 | 343 | 1.33e-74 | 240 |
| Msa0570670 | MtrunA17_Chr1g0161011 | 38.506 | 348 | 208 | 4 | 8 | 351 | 1 | 346 | 1.64e-73 | 237 |
| Msa0570670 | MtrunA17_Chr5g0434591 | 38.938 | 339 | 194 | 5 | 8 | 339 | 1 | 333 | 2.76e-73 | 237 |
| Msa0570670 | MtrunA17_Chr4g0039011 | 40.123 | 324 | 182 | 6 | 30 | 353 | 40 | 351 | 3.66e-73 | 233 |
| Msa0570670 | MtrunA17_Chr3g0110371 | 36.826 | 334 | 206 | 3 | 10 | 339 | 2 | 334 | 1.06e-68 | 224 |
| Msa0570670 | MtrunA17_Chr4g0038981 | 38.941 | 321 | 183 | 7 | 26 | 346 | 17 | 324 | 6.20e-67 | 215 |
| Msa0570670 | MtrunA17_Chr4g0038971 | 38.750 | 320 | 183 | 8 | 29 | 348 | 20 | 326 | 1.08e-66 | 214 |
| Msa0570670 | MtrunA17_Chr4g0038961 | 38.580 | 324 | 184 | 8 | 26 | 348 | 17 | 326 | 5.64e-66 | 213 |
| Msa0570670 | MtrunA17_Chr4g0038941 | 39.319 | 323 | 183 | 6 | 26 | 348 | 46 | 355 | 7.42e-66 | 213 |
| Msa0570670 | MtrunA17_Chr2g0294601 | 38.769 | 325 | 189 | 7 | 30 | 352 | 57 | 373 | 2.49e-63 | 208 |
| Msa0570670 | MtrunA17_Chr7g0250301 | 34.056 | 323 | 203 | 6 | 25 | 346 | 1 | 314 | 4.41e-62 | 202 |
| Msa0570670 | MtrunA17_Chr4g0039071 | 38.629 | 321 | 187 | 7 | 31 | 349 | 24 | 336 | 8.31e-62 | 203 |
| Msa0570670 | MtrunA17_Chr2g0294591 | 35.542 | 332 | 202 | 8 | 30 | 358 | 28 | 350 | 1.95e-58 | 194 |
| Msa0570670 | MtrunA17_Chr1g0174261 | 38.754 | 289 | 167 | 6 | 62 | 348 | 2 | 282 | 4.39e-57 | 190 |
| Msa0570670 | MtrunA17_Chr4g0039021 | 37.324 | 284 | 168 | 5 | 58 | 340 | 7 | 281 | 7.83e-55 | 182 |
| Msa0570670 | MtrunA17_Chr1g0148391 | 33.708 | 356 | 215 | 13 | 6 | 352 | 4 | 347 | 8.21e-52 | 180 |
| Msa0570670 | MtrunA17_Chr7g0250321 | 32.877 | 292 | 185 | 6 | 7 | 297 | 5 | 286 | 1.10e-49 | 169 |
| Msa0570670 | MtrunA17_Chr2g0290821 | 32.432 | 333 | 212 | 10 | 27 | 351 | 23 | 350 | 1.12e-47 | 169 |
| Msa0570670 | MtrunA17_Chr4g0062771 | 31.129 | 363 | 226 | 13 | 2 | 353 | 6 | 355 | 1.41e-47 | 169 |
| Msa0570670 | MtrunA17_Chr3g0138741 | 32.370 | 346 | 221 | 10 | 14 | 352 | 13 | 352 | 1.84e-47 | 168 |
| Msa0570670 | MtrunA17_Chr6g0461601 | 32.267 | 344 | 208 | 11 | 11 | 341 | 8 | 339 | 6.24e-47 | 167 |
| Msa0570670 | MtrunA17_Chr4g0069801 | 30.899 | 356 | 227 | 13 | 6 | 352 | 4 | 349 | 3.62e-46 | 165 |
| Msa0570670 | MtrunA17_Chr7g0253091 | 32.743 | 339 | 208 | 11 | 25 | 352 | 19 | 348 | 7.57e-46 | 164 |
| Msa0570670 | MtrunA17_Chr8g0383311 | 29.101 | 378 | 253 | 11 | 13 | 382 | 24 | 394 | 1.78e-44 | 160 |
| Msa0570670 | MtrunA17_Chr4g0076581 | 33.233 | 331 | 206 | 11 | 30 | 351 | 31 | 355 | 1.57e-43 | 158 |
| Msa0570670 | MtrunA17_Chr5g0436361 | 34.967 | 306 | 184 | 10 | 48 | 347 | 53 | 349 | 1.59e-41 | 150 |
| Msa0570670 | MtrunA17_Chr3g0105981 | 32.635 | 334 | 208 | 10 | 31 | 356 | 26 | 350 | 2.07e-41 | 151 |
| Msa0570670 | MtrunA17_Chr2g0306311 | 28.933 | 356 | 212 | 12 | 30 | 350 | 28 | 377 | 2.73e-38 | 144 |
| Msa0570670 | MtrunA17_Chr3g0129341 | 29.532 | 342 | 224 | 13 | 29 | 362 | 31 | 363 | 3.90e-37 | 140 |
| Msa0570670 | MtrunA17_Chr4g0018771 | 37.410 | 139 | 76 | 4 | 254 | 388 | 86 | 217 | 3.30e-20 | 88.6 |
| Msa0570670 | MtrunA17_Chr4g0018861 | 36.806 | 144 | 80 | 4 | 249 | 388 | 79 | 215 | 5.46e-20 | 87.8 |
| Msa0570670 | MtrunA17_Chr2g0294581 | 34.211 | 152 | 91 | 3 | 30 | 179 | 74 | 218 | 3.01e-17 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570670 | AT4G18340.1 | 60.051 | 393 | 157 | 0 | 3 | 395 | 5 | 397 | 4.46e-174 | 491 |
| Msa0570670 | AT4G18340.2 | 62.366 | 372 | 140 | 0 | 3 | 374 | 5 | 376 | 6.74e-174 | 490 |
| Msa0570670 | AT1G30080.2 | 64.589 | 353 | 121 | 3 | 1 | 349 | 1 | 353 | 5.45e-168 | 475 |
| Msa0570670 | AT1G30080.1 | 64.589 | 353 | 121 | 3 | 1 | 349 | 1 | 353 | 7.39e-168 | 476 |
| Msa0570670 | AT2G27500.2 | 51.312 | 343 | 160 | 2 | 33 | 374 | 30 | 366 | 3.96e-122 | 358 |
| Msa0570670 | AT2G27500.1 | 51.020 | 343 | 161 | 2 | 33 | 374 | 30 | 366 | 1.49e-121 | 358 |
| Msa0570670 | AT1G32860.1 | 50.155 | 323 | 159 | 1 | 31 | 351 | 28 | 350 | 4.50e-120 | 355 |
| Msa0570670 | AT5G42100.2 | 51.692 | 325 | 154 | 2 | 29 | 350 | 24 | 348 | 1.15e-115 | 344 |
| Msa0570670 | AT5G42100.1 | 51.692 | 325 | 154 | 2 | 29 | 350 | 24 | 348 | 1.97e-115 | 343 |
| Msa0570670 | AT3G15800.1 | 48.094 | 341 | 174 | 3 | 19 | 357 | 31 | 370 | 3.56e-114 | 339 |
| Msa0570670 | AT2G26600.1 | 43.895 | 344 | 191 | 2 | 27 | 369 | 29 | 371 | 1.81e-105 | 317 |
| Msa0570670 | AT4G26830.1 | 47.175 | 354 | 181 | 4 | 8 | 359 | 1 | 350 | 2.85e-104 | 316 |
| Msa0570670 | AT4G26830.2 | 49.240 | 329 | 161 | 4 | 33 | 359 | 30 | 354 | 4.49e-103 | 313 |
| Msa0570670 | AT5G55180.1 | 47.164 | 335 | 168 | 4 | 18 | 350 | 19 | 346 | 3.30e-100 | 305 |
| Msa0570670 | AT5G55180.2 | 47.164 | 335 | 168 | 4 | 18 | 350 | 19 | 346 | 3.48e-100 | 306 |
| Msa0570670 | AT2G27500.3 | 50.340 | 294 | 139 | 2 | 82 | 374 | 1 | 288 | 4.54e-100 | 300 |
| Msa0570670 | AT5G24318.4 | 45.820 | 323 | 169 | 3 | 30 | 350 | 28 | 346 | 1.00e-96 | 293 |
| Msa0570670 | AT2G05790.1 | 46.273 | 322 | 170 | 3 | 29 | 348 | 22 | 342 | 7.36e-96 | 295 |
| Msa0570670 | AT5G24318.2 | 45.646 | 333 | 174 | 4 | 30 | 359 | 28 | 356 | 7.69e-96 | 294 |
| Msa0570670 | AT5G24318.1 | 45.646 | 333 | 174 | 4 | 30 | 359 | 28 | 356 | 1.54e-95 | 293 |
| Msa0570670 | AT4G34480.2 | 45.872 | 327 | 176 | 1 | 32 | 357 | 26 | 352 | 1.05e-93 | 285 |
| Msa0570670 | AT5G42720.1 | 44.444 | 342 | 188 | 2 | 12 | 351 | 6 | 347 | 1.91e-93 | 287 |
| Msa0570670 | AT4G34480.1 | 44.536 | 366 | 194 | 3 | 13 | 377 | 12 | 369 | 2.79e-91 | 284 |
| Msa0570670 | AT5G56590.1 | 43.614 | 321 | 179 | 2 | 33 | 351 | 27 | 347 | 3.27e-90 | 281 |
| Msa0570670 | AT2G16230.1 | 43.252 | 326 | 184 | 1 | 32 | 356 | 25 | 350 | 9.73e-90 | 280 |
| Msa0570670 | AT2G26600.2 | 45.221 | 272 | 148 | 1 | 98 | 369 | 7 | 277 | 1.94e-84 | 259 |
| Msa0570670 | AT3G07320.1 | 41.231 | 325 | 185 | 5 | 33 | 352 | 26 | 349 | 2.09e-84 | 265 |
| Msa0570670 | AT3G13560.4 | 40.741 | 324 | 187 | 3 | 27 | 346 | 21 | 343 | 1.37e-80 | 256 |
| Msa0570670 | AT3G13560.1 | 40.741 | 324 | 187 | 3 | 27 | 346 | 21 | 343 | 1.37e-80 | 256 |
| Msa0570670 | AT3G13560.2 | 40.741 | 324 | 187 | 3 | 27 | 346 | 21 | 343 | 1.37e-80 | 256 |
| Msa0570670 | AT3G13560.5 | 40.741 | 324 | 187 | 3 | 27 | 346 | 21 | 343 | 1.37e-80 | 256 |
| Msa0570670 | AT3G13560.3 | 40.741 | 324 | 187 | 3 | 27 | 346 | 21 | 343 | 1.37e-80 | 256 |
| Msa0570670 | AT4G14080.1 | 39.506 | 324 | 191 | 4 | 29 | 348 | 39 | 361 | 1.70e-77 | 248 |
| Msa0570670 | AT1G11820.1 | 39.329 | 328 | 194 | 3 | 33 | 356 | 45 | 371 | 5.35e-77 | 243 |
| Msa0570670 | AT3G23770.1 | 38.739 | 333 | 196 | 5 | 26 | 351 | 31 | 362 | 3.62e-76 | 244 |
| Msa0570670 | AT1G11820.3 | 39.628 | 323 | 190 | 3 | 33 | 351 | 45 | 366 | 6.98e-76 | 243 |
| Msa0570670 | AT1G11820.2 | 39.937 | 318 | 186 | 3 | 33 | 346 | 45 | 361 | 1.34e-75 | 243 |
| Msa0570670 | AT4G29360.1 | 41.925 | 322 | 185 | 2 | 26 | 346 | 21 | 341 | 1.15e-74 | 242 |
| Msa0570670 | AT2G01630.2 | 40.432 | 324 | 188 | 3 | 32 | 351 | 23 | 345 | 1.58e-74 | 237 |
| Msa0570670 | AT4G29360.2 | 41.925 | 322 | 185 | 2 | 26 | 346 | 31 | 351 | 1.68e-74 | 241 |
| Msa0570670 | AT2G01630.3 | 40.432 | 324 | 188 | 3 | 32 | 351 | 23 | 345 | 3.79e-74 | 238 |
| Msa0570670 | AT2G01630.1 | 40.432 | 324 | 188 | 3 | 32 | 351 | 23 | 345 | 2.04e-73 | 238 |
| Msa0570670 | AT3G55430.1 | 38.395 | 349 | 203 | 9 | 27 | 371 | 24 | 364 | 4.03e-72 | 233 |
| Msa0570670 | AT3G46570.1 | 41.212 | 330 | 183 | 8 | 26 | 350 | 21 | 344 | 4.39e-69 | 222 |
| Msa0570670 | AT1G66250.1 | 37.222 | 360 | 214 | 6 | 21 | 375 | 26 | 378 | 4.01e-68 | 224 |
| Msa0570670 | AT5G20390.1 | 37.101 | 345 | 205 | 8 | 1 | 342 | 1 | 336 | 4.50e-67 | 216 |
| Msa0570670 | AT3G57270.1 | 38.871 | 319 | 183 | 8 | 33 | 348 | 28 | 337 | 1.50e-65 | 212 |
| Msa0570670 | AT5G20340.1 | 38.700 | 323 | 183 | 7 | 24 | 342 | 35 | 346 | 1.19e-63 | 208 |
| Msa0570670 | AT4G34480.3 | 46.332 | 259 | 136 | 1 | 119 | 377 | 3 | 258 | 5.95e-63 | 207 |
| Msa0570670 | AT3G61810.1 | 36.364 | 330 | 188 | 6 | 32 | 351 | 55 | 372 | 7.71e-62 | 204 |
| Msa0570670 | AT4G16260.1 | 34.670 | 349 | 211 | 6 | 8 | 352 | 1 | 336 | 1.00e-61 | 202 |
| Msa0570670 | AT2G39640.1 | 35.942 | 345 | 208 | 7 | 10 | 350 | 5 | 340 | 1.69e-61 | 207 |
| Msa0570670 | AT5G20330.1 | 37.537 | 341 | 190 | 8 | 14 | 342 | 8 | 337 | 1.83e-61 | 202 |
| Msa0570670 | AT3G57260.1 | 36.982 | 338 | 195 | 10 | 13 | 348 | 15 | 336 | 1.28e-60 | 199 |
| Msa0570670 | AT3G57260.2 | 36.982 | 338 | 195 | 10 | 13 | 348 | 31 | 352 | 1.40e-60 | 200 |
| Msa0570670 | AT1G33220.1 | 37.278 | 338 | 189 | 8 | 14 | 338 | 8 | 335 | 1.58e-60 | 199 |
| Msa0570670 | AT1G77780.1 | 33.807 | 352 | 220 | 9 | 13 | 362 | 4 | 344 | 1.67e-59 | 197 |
| Msa0570670 | AT4G16260.2 | 35.350 | 314 | 195 | 4 | 39 | 352 | 2 | 307 | 1.88e-58 | 193 |
| Msa0570670 | AT5G24318.3 | 45.662 | 219 | 113 | 3 | 143 | 359 | 3 | 217 | 1.91e-57 | 191 |
| Msa0570670 | AT1G77790.1 | 35.174 | 344 | 210 | 8 | 10 | 348 | 6 | 341 | 4.07e-57 | 191 |
| Msa0570670 | AT3G57240.1 | 34.462 | 325 | 198 | 8 | 25 | 348 | 28 | 338 | 2.46e-52 | 178 |
| Msa0570670 | AT4G31140.1 | 30.899 | 356 | 229 | 11 | 4 | 352 | 3 | 348 | 5.87e-47 | 167 |
| Msa0570670 | AT3G24330.1 | 32.861 | 353 | 216 | 14 | 13 | 352 | 18 | 362 | 4.16e-46 | 166 |
| Msa0570670 | AT5G20560.1 | 32.907 | 313 | 194 | 8 | 33 | 340 | 35 | 336 | 2.74e-45 | 159 |
| Msa0570670 | AT5G64790.1 | 33.230 | 322 | 198 | 11 | 29 | 341 | 25 | 338 | 7.72e-45 | 162 |
| Msa0570670 | AT5G18220.1 | 31.818 | 330 | 212 | 8 | 29 | 352 | 27 | 349 | 6.01e-43 | 157 |
| Msa0570670 | AT5G58090.1 | 29.834 | 362 | 226 | 11 | 28 | 382 | 18 | 358 | 5.01e-42 | 154 |
| Msa0570670 | AT2G19440.2 | 31.609 | 348 | 221 | 11 | 14 | 352 | 3 | 342 | 1.29e-41 | 153 |
| Msa0570670 | AT2G19440.1 | 31.609 | 348 | 221 | 11 | 14 | 352 | 3 | 342 | 1.29e-41 | 153 |
| Msa0570670 | AT1G64760.1 | 31.953 | 338 | 211 | 11 | 29 | 356 | 22 | 350 | 1.33e-41 | 153 |
| Msa0570670 | AT1G64760.2 | 31.953 | 338 | 211 | 11 | 29 | 356 | 22 | 350 | 1.33e-41 | 153 |
| Msa0570670 | AT4G17180.1 | 30.514 | 331 | 210 | 11 | 30 | 351 | 23 | 342 | 2.22e-41 | 152 |
| Msa0570670 | AT5G58480.1 | 31.804 | 327 | 208 | 9 | 29 | 347 | 23 | 342 | 4.80e-41 | 151 |
| Msa0570670 | AT3G55780.1 | 32.390 | 318 | 199 | 10 | 46 | 355 | 49 | 358 | 1.25e-40 | 148 |
| Msa0570670 | AT5G20870.1 | 31.680 | 363 | 221 | 14 | 5 | 351 | 6 | 357 | 1.98e-40 | 150 |
| Msa0570670 | AT3G04010.1 | 31.487 | 343 | 212 | 12 | 9 | 341 | 14 | 343 | 4.28e-39 | 146 |
Find 67 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGAACAAGATATTGAATT+AGG | 0.153002 | 4_1:+72966189 | None:intergenic |
| ACATTTGCCATTGCTAAATT+AGG | 0.171344 | 4_1:-72965831 | Msa0570670:CDS |
| TATGATTCCAATCTCATTCT+AGG | 0.189809 | 4_1:+72965660 | None:intergenic |
| TCATAATGTAAATTTGTATT+AGG | 0.242481 | 4_1:+72965885 | None:intergenic |
| GATAATTTCCACGTCTGAAT+TGG | 0.275744 | 4_1:+72966361 | None:intergenic |
| ATATTGATTTAGAGGGAAAT+AGG | 0.284181 | 4_1:+72966717 | None:intergenic |
| CTAAATAACTTGTATATTGT+TGG | 0.296342 | 4_1:+72965420 | None:intergenic |
| TTCGCACGTGTCGCGTCATT+TGG | 0.301924 | 4_1:-72966509 | Msa0570670:CDS |
| TAGTCTAGAGATATTTGATT+AGG | 0.302492 | 4_1:+72965942 | None:intergenic |
| TACAATGCTCTAGTTCAATT+AGG | 0.318143 | 4_1:-72966152 | Msa0570670:CDS |
| TGTGACAAATATTGATTTAG+AGG | 0.321820 | 4_1:+72966709 | None:intergenic |
| TGCTCTAGTTCAATTAGGTT+TGG | 0.329748 | 4_1:-72966147 | Msa0570670:CDS |
| CTTGTTGTGGATCATTTAAT+TGG | 0.341370 | 4_1:+72966312 | None:intergenic |
| ATCTTTGTGTCTGGAAGATA+TGG | 0.358675 | 4_1:+72966260 | None:intergenic |
| GAGGTTAGGGTTTCTGAGAC+TGG | 0.362945 | 4_1:-72965795 | Msa0570670:CDS |
| AGTCTAGAGATATTTGATTA+GGG | 0.367834 | 4_1:+72965943 | None:intergenic |
| GTAAGAGAAATTGAAGTAGA+AGG | 0.368771 | 4_1:+72965510 | None:intergenic |
| TTTGAATCCTAGAATGAGAT+TGG | 0.371338 | 4_1:-72965667 | Msa0570670:CDS |
| AAAGGTGACTCTGATGAAAT+TGG | 0.380257 | 4_1:-72965762 | Msa0570670:CDS |
| GGATCAACCATTCCTTGGTT+AGG | 0.386797 | 4_1:+72965906 | None:intergenic |
| TCATTCTTATAAGCAAAATA+AGG | 0.388117 | 4_1:+72965966 | None:intergenic |
| GCGTCATTTGGAATCAACTA+TGG | 0.393043 | 4_1:-72966497 | Msa0570670:CDS |
| TCTCTTACCTCTTCTGCCAC+TGG | 0.396125 | 4_1:-72965495 | Msa0570670:CDS |
| TTTAATGAAAATATGAAGAA+TGG | 0.404108 | 4_1:-72965624 | Msa0570670:CDS |
| TGGAACAAGATATTGAATTA+GGG | 0.410253 | 4_1:+72966190 | None:intergenic |
| CTCTTACCTCTTCTGCCACT+GGG | 0.413547 | 4_1:-72965494 | Msa0570670:CDS |
| TGGAAGATATGGTTTGATAT+TGG | 0.415025 | 4_1:+72966271 | None:intergenic |
| CCAACCTCAGAAAGGAACTA+TGG | 0.427631 | 4_1:-72965600 | Msa0570670:CDS |
| CCATAGTTCCTTTCTGAGGT+TGG | 0.438349 | 4_1:+72965600 | None:intergenic |
| TATTAGGATCAACCATTCCT+TGG | 0.446836 | 4_1:+72965901 | None:intergenic |
| ATCCACAACAAGCACTTCAA+TGG | 0.448948 | 4_1:-72966301 | Msa0570670:CDS |
| TGATAACATGCTTTATGCTA+TGG | 0.465658 | 4_1:-72965865 | Msa0570670:CDS |
| AGGATATGCATTGACCCAAA+AGG | 0.470969 | 4_1:+72965986 | None:intergenic |
| TTGTAAGTCATACTTTCATC+AGG | 0.472826 | 4_1:+72965567 | None:intergenic |
| AAAGTATGACTTACAATGTT+GGG | 0.473433 | 4_1:-72965560 | Msa0570670:CDS |
| ATTCCAGTGATCTTTGTGTC+TGG | 0.474898 | 4_1:+72966251 | None:intergenic |
| AAGATCACTGGAATTCAAGT+AGG | 0.477367 | 4_1:-72966242 | Msa0570670:CDS |
| CTCTTCTGCCACTGGGACAA+AGG | 0.479527 | 4_1:-72965487 | Msa0570670:CDS |
| GGCAACATTTACTCAAAGAA+TGG | 0.488334 | 4_1:-72966684 | Msa0570670:CDS |
| GGATATGCATTGACCCAAAA+GGG | 0.491865 | 4_1:+72965987 | None:intergenic |
| TTGTAAATGTTGATCACTGC+TGG | 0.497136 | 4_1:+72966170 | None:intergenic |
| TTTATAACAAGAATTTATTG+AGG | 0.499075 | 4_1:-72965716 | Msa0570670:CDS |
| TTAGGGTTTCTGAGACTGGT+TGG | 0.504743 | 4_1:-72965791 | Msa0570670:CDS |
| GTGACAAATATTGATTTAGA+GGG | 0.511053 | 4_1:+72966710 | None:intergenic |
| TCAAGAACTTCTAATGAACT+AGG | 0.514280 | 4_1:+72966101 | None:intergenic |
| AATCTCATTCTAGGATTCAA+AGG | 0.515011 | 4_1:+72965669 | None:intergenic |
| AGTTTCAGAAGTGAAATCTC+TGG | 0.515867 | 4_1:-72966053 | Msa0570670:CDS |
| GAGACTGGTTGGCCATCAAA+AGG | 0.519791 | 4_1:-72965780 | Msa0570670:CDS |
| TCCACAACAAGCACTTCAAT+GGG | 0.523957 | 4_1:-72966300 | Msa0570670:CDS |
| ATTTAATCCTAACCAAGGAA+TGG | 0.526689 | 4_1:-72965913 | Msa0570670:CDS |
| CTTTGTCCCAGTGGCAGAAG+AGG | 0.529705 | 4_1:+72965488 | None:intergenic |
| AGGAGACAAATGAAGAATGA+AGG | 0.534907 | 4_1:-72965696 | Msa0570670:CDS |
| CTTCCAGACACAAAGATCAC+TGG | 0.544255 | 4_1:-72966254 | Msa0570670:CDS |
| CTGAAACTACCAACTGAAGG+AGG | 0.545386 | 4_1:+72966068 | None:intergenic |
| ACCCATTGAAGTGCTTGTTG+TGG | 0.545635 | 4_1:+72966299 | None:intergenic |
| GCGAAAGCTTTAAGAATCTG+TGG | 0.549065 | 4_1:+72966383 | None:intergenic |
| GAATCTTACCCTCCTTCAGT+TGG | 0.549919 | 4_1:-72966077 | Msa0570670:CDS |
| ATTAAAACCTAATTTAGCAA+TGG | 0.564223 | 4_1:+72965824 | None:intergenic |
| TAAATCAATATTTGTCACAA+TGG | 0.569290 | 4_1:-72966705 | Msa0570670:exon |
| TAAACCATAGTTCCTTTCTG+AGG | 0.569646 | 4_1:+72965596 | None:intergenic |
| GAAAGTATGACTTACAATGT+TGG | 0.572069 | 4_1:-72965561 | Msa0570670:CDS |
| AGATCACTGGAATTCAAGTA+GGG | 0.581675 | 4_1:-72966241 | Msa0570670:CDS |
| AGCTTTCGCCAATTCAGACG+TGG | 0.610463 | 4_1:-72966369 | Msa0570670:CDS |
| AGAATGGACCAACCTCAGAA+AGG | 0.610841 | 4_1:-72965608 | Msa0570670:CDS |
| CTTCTGAAACTACCAACTGA+AGG | 0.615063 | 4_1:+72966065 | None:intergenic |
| GTATTATTTAATCCTAACCA+AGG | 0.619362 | 4_1:-72965918 | Msa0570670:CDS |
| TGAAACTACCAACTGAAGGA+GGG | 0.625505 | 4_1:+72966069 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATAATGTAAATTTGTATT+AGG | + | chr4_1:72966271-72966290 | None:intergenic | 15.0% |
| !! | TTTATAACAAGAATTTATTG+AGG | - | chr4_1:72966437-72966456 | Msa0570670:CDS | 15.0% |
| !! | TTTAATGAAAATATGAAGAA+TGG | - | chr4_1:72966529-72966548 | Msa0570670:intron | 15.0% |
| !! | TCATAATGTAAATTTGTATT+AGG | + | chr4_1:72966271-72966290 | None:intergenic | 15.0% |
| !! | TTTATAACAAGAATTTATTG+AGG | - | chr4_1:72966437-72966456 | Msa0570670:CDS | 15.0% |
| !! | TTTAATGAAAATATGAAGAA+TGG | - | chr4_1:72966529-72966548 | Msa0570670:intron | 15.0% |
| !! | TAAATCAATATTTGTCACAA+TGG | - | chr4_1:72965448-72965467 | Msa0570670:CDS | 20.0% |
| !! | TCATTCTTATAAGCAAAATA+AGG | + | chr4_1:72966190-72966209 | None:intergenic | 20.0% |
| !! | ATTAAAACCTAATTTAGCAA+TGG | + | chr4_1:72966332-72966351 | None:intergenic | 20.0% |
| !!! | ATTGCTAAATTAGGTTTTAA+TGG | - | chr4_1:72966331-72966350 | Msa0570670:CDS | 20.0% |
| !!! | TTGCTAAATTAGGTTTTAAT+GGG | - | chr4_1:72966332-72966351 | Msa0570670:CDS | 20.0% |
| !!! | CTAAATAACTTGTATATTGT+TGG | + | chr4_1:72966736-72966755 | None:intergenic | 20.0% |
| !! | TAAATCAATATTTGTCACAA+TGG | - | chr4_1:72965448-72965467 | Msa0570670:CDS | 20.0% |
| !! | TCATTCTTATAAGCAAAATA+AGG | + | chr4_1:72966190-72966209 | None:intergenic | 20.0% |
| !! | ATTAAAACCTAATTTAGCAA+TGG | + | chr4_1:72966332-72966351 | None:intergenic | 20.0% |
| !!! | ATTGCTAAATTAGGTTTTAA+TGG | - | chr4_1:72966331-72966350 | Msa0570670:CDS | 20.0% |
| !!! | TTGCTAAATTAGGTTTTAAT+GGG | - | chr4_1:72966332-72966351 | Msa0570670:CDS | 20.0% |
| !!! | CTAAATAACTTGTATATTGT+TGG | + | chr4_1:72966736-72966755 | None:intergenic | 20.0% |
| !!! | ATATTGATTTAGAGGGAAAT+AGG | + | chr4_1:72965439-72965458 | None:intergenic | 25.0% |
| !!! | GTGACAAATATTGATTTAGA+GGG | + | chr4_1:72965446-72965465 | None:intergenic | 25.0% |
| !!! | TGTGACAAATATTGATTTAG+AGG | + | chr4_1:72965447-72965466 | None:intergenic | 25.0% |
| ! | ATGAAAAAACAGAACAAACA+GGG | + | chr4_1:72965537-72965556 | None:intergenic | 25.0% |
| ! | TGGAACAAGATATTGAATTA+GGG | + | chr4_1:72965966-72965985 | None:intergenic | 25.0% |
| !! | AAAAACAAAATCACCCTTTT+GGG | - | chr4_1:72966153-72966172 | Msa0570670:CDS | 25.0% |
| ! | AGTCTAGAGATATTTGATTA+GGG | + | chr4_1:72966213-72966232 | None:intergenic | 25.0% |
| ! | TAGTCTAGAGATATTTGATT+AGG | + | chr4_1:72966214-72966233 | None:intergenic | 25.0% |
| ! | GTATTATTTAATCCTAACCA+AGG | - | chr4_1:72966235-72966254 | Msa0570670:CDS | 25.0% |
| ! | AAAGTATGACTTACAATGTT+GGG | - | chr4_1:72966593-72966612 | Msa0570670:intron | 25.0% |
| !!! | ATATTGATTTAGAGGGAAAT+AGG | + | chr4_1:72965439-72965458 | None:intergenic | 25.0% |
| !!! | GTGACAAATATTGATTTAGA+GGG | + | chr4_1:72965446-72965465 | None:intergenic | 25.0% |
| !!! | TGTGACAAATATTGATTTAG+AGG | + | chr4_1:72965447-72965466 | None:intergenic | 25.0% |
| ! | ATGAAAAAACAGAACAAACA+GGG | + | chr4_1:72965537-72965556 | None:intergenic | 25.0% |
| ! | TGGAACAAGATATTGAATTA+GGG | + | chr4_1:72965966-72965985 | None:intergenic | 25.0% |
| !! | AAAAACAAAATCACCCTTTT+GGG | - | chr4_1:72966153-72966172 | Msa0570670:CDS | 25.0% |
| ! | AGTCTAGAGATATTTGATTA+GGG | + | chr4_1:72966213-72966232 | None:intergenic | 25.0% |
| ! | TAGTCTAGAGATATTTGATT+AGG | + | chr4_1:72966214-72966233 | None:intergenic | 25.0% |
| ! | GTATTATTTAATCCTAACCA+AGG | - | chr4_1:72966235-72966254 | Msa0570670:CDS | 25.0% |
| ! | AAAGTATGACTTACAATGTT+GGG | - | chr4_1:72966593-72966612 | Msa0570670:intron | 25.0% |
| CATGAAAAAACAGAACAAAC+AGG | + | chr4_1:72965538-72965557 | None:intergenic | 30.0% | |
| GATTATGCAATTACAGATAC+TGG | - | chr4_1:72965617-72965636 | Msa0570670:CDS | 30.0% | |
| ! | CTTGTTGTGGATCATTTAAT+TGG | + | chr4_1:72965844-72965863 | None:intergenic | 30.0% |
| TGGAAGATATGGTTTGATAT+TGG | + | chr4_1:72965885-72965904 | None:intergenic | 30.0% | |
| CTGGAACAAGATATTGAATT+AGG | + | chr4_1:72965967-72965986 | None:intergenic | 30.0% | |
| ! | TACAATGCTCTAGTTCAATT+AGG | - | chr4_1:72966001-72966020 | Msa0570670:CDS | 30.0% |
| TCAAGAACTTCTAATGAACT+AGG | + | chr4_1:72966055-72966074 | None:intergenic | 30.0% | |
| ! | CAAAAACAAAATCACCCTTT+TGG | - | chr4_1:72966152-72966171 | Msa0570670:CDS | 30.0% |
| ATTTAATCCTAACCAAGGAA+TGG | - | chr4_1:72966240-72966259 | Msa0570670:CDS | 30.0% | |
| TGATAACATGCTTTATGCTA+TGG | - | chr4_1:72966288-72966307 | Msa0570670:CDS | 30.0% | |
| ACATTTGCCATTGCTAAATT+AGG | - | chr4_1:72966322-72966341 | Msa0570670:CDS | 30.0% | |
| !! | ATTAGGTTTTAATGGGATAG+AGG | - | chr4_1:72966339-72966358 | Msa0570670:CDS | 30.0% |
| ! | TTTTAATGGGATAGAGGTTA+GGG | - | chr4_1:72966345-72966364 | Msa0570670:CDS | 30.0% |
| !! | AATCTCATTCTAGGATTCAA+AGG | + | chr4_1:72966487-72966506 | None:intergenic | 30.0% |
| TTTGAATCCTAGAATGAGAT+TGG | - | chr4_1:72966486-72966505 | Msa0570670:CDS | 30.0% | |
| TATGATTCCAATCTCATTCT+AGG | + | chr4_1:72966496-72966515 | None:intergenic | 30.0% | |
| TTGTAAGTCATACTTTCATC+AGG | + | chr4_1:72966589-72966608 | None:intergenic | 30.0% | |
| ! | GAAAGTATGACTTACAATGT+TGG | - | chr4_1:72966592-72966611 | Msa0570670:intron | 30.0% |
| GTAAGAGAAATTGAAGTAGA+AGG | + | chr4_1:72966646-72966665 | None:intergenic | 30.0% | |
| CATGAAAAAACAGAACAAAC+AGG | + | chr4_1:72965538-72965557 | None:intergenic | 30.0% | |
| GATTATGCAATTACAGATAC+TGG | - | chr4_1:72965617-72965636 | Msa0570670:CDS | 30.0% | |
| ! | CTTGTTGTGGATCATTTAAT+TGG | + | chr4_1:72965844-72965863 | None:intergenic | 30.0% |
| TGGAAGATATGGTTTGATAT+TGG | + | chr4_1:72965885-72965904 | None:intergenic | 30.0% | |
| CTGGAACAAGATATTGAATT+AGG | + | chr4_1:72965967-72965986 | None:intergenic | 30.0% | |
| ! | TACAATGCTCTAGTTCAATT+AGG | - | chr4_1:72966001-72966020 | Msa0570670:CDS | 30.0% |
| TCAAGAACTTCTAATGAACT+AGG | + | chr4_1:72966055-72966074 | None:intergenic | 30.0% | |
| ! | CAAAAACAAAATCACCCTTT+TGG | - | chr4_1:72966152-72966171 | Msa0570670:CDS | 30.0% |
| ATTTAATCCTAACCAAGGAA+TGG | - | chr4_1:72966240-72966259 | Msa0570670:CDS | 30.0% | |
| TGATAACATGCTTTATGCTA+TGG | - | chr4_1:72966288-72966307 | Msa0570670:CDS | 30.0% | |
| ACATTTGCCATTGCTAAATT+AGG | - | chr4_1:72966322-72966341 | Msa0570670:CDS | 30.0% | |
| !! | ATTAGGTTTTAATGGGATAG+AGG | - | chr4_1:72966339-72966358 | Msa0570670:CDS | 30.0% |
| ! | TTTTAATGGGATAGAGGTTA+GGG | - | chr4_1:72966345-72966364 | Msa0570670:CDS | 30.0% |
| !! | AATCTCATTCTAGGATTCAA+AGG | + | chr4_1:72966487-72966506 | None:intergenic | 30.0% |
| TTTGAATCCTAGAATGAGAT+TGG | - | chr4_1:72966486-72966505 | Msa0570670:CDS | 30.0% | |
| TATGATTCCAATCTCATTCT+AGG | + | chr4_1:72966496-72966515 | None:intergenic | 30.0% | |
| TTGTAAGTCATACTTTCATC+AGG | + | chr4_1:72966589-72966608 | None:intergenic | 30.0% | |
| ! | GAAAGTATGACTTACAATGT+TGG | - | chr4_1:72966592-72966611 | Msa0570670:intron | 30.0% |
| GTAAGAGAAATTGAAGTAGA+AGG | + | chr4_1:72966646-72966665 | None:intergenic | 30.0% | |
| GGCAACATTTACTCAAAGAA+TGG | - | chr4_1:72965469-72965488 | Msa0570670:CDS | 35.0% | |
| !!! | AGAAGTCCTAGTACTTTTTC+TGG | + | chr4_1:72965707-72965726 | None:intergenic | 35.0% |
| GATAATTTCCACGTCTGAAT+TGG | + | chr4_1:72965795-72965814 | None:intergenic | 35.0% | |
| ATCTTTGTGTCTGGAAGATA+TGG | + | chr4_1:72965896-72965915 | None:intergenic | 35.0% | |
| AAGATCACTGGAATTCAAGT+AGG | - | chr4_1:72965911-72965930 | Msa0570670:CDS | 35.0% | |
| AGATCACTGGAATTCAAGTA+GGG | - | chr4_1:72965912-72965931 | Msa0570670:CDS | 35.0% | |
| TTGTAAATGTTGATCACTGC+TGG | + | chr4_1:72965986-72966005 | None:intergenic | 35.0% | |
| ! | TGCTCTAGTTCAATTAGGTT+TGG | - | chr4_1:72966006-72966025 | Msa0570670:CDS | 35.0% |
| AGTTTCAGAAGTGAAATCTC+TGG | - | chr4_1:72966100-72966119 | Msa0570670:CDS | 35.0% | |
| TATTAGGATCAACCATTCCT+TGG | + | chr4_1:72966255-72966274 | None:intergenic | 35.0% | |
| !! | GTTTTAATGGGATAGAGGTT+AGG | - | chr4_1:72966344-72966363 | Msa0570670:CDS | 35.0% |
| AAAGGTGACTCTGATGAAAT+TGG | - | chr4_1:72966391-72966410 | Msa0570670:CDS | 35.0% | |
| AGGAGACAAATGAAGAATGA+AGG | - | chr4_1:72966457-72966476 | Msa0570670:CDS | 35.0% | |
| TAAACCATAGTTCCTTTCTG+AGG | + | chr4_1:72966560-72966579 | None:intergenic | 35.0% | |
| !!! | TTTTTTTACCTTTGTCCCAG+TGG | + | chr4_1:72966677-72966696 | None:intergenic | 35.0% |
| GGCAACATTTACTCAAAGAA+TGG | - | chr4_1:72965469-72965488 | Msa0570670:CDS | 35.0% | |
| !!! | AGAAGTCCTAGTACTTTTTC+TGG | + | chr4_1:72965707-72965726 | None:intergenic | 35.0% |
| GATAATTTCCACGTCTGAAT+TGG | + | chr4_1:72965795-72965814 | None:intergenic | 35.0% | |
| ATCTTTGTGTCTGGAAGATA+TGG | + | chr4_1:72965896-72965915 | None:intergenic | 35.0% | |
| AAGATCACTGGAATTCAAGT+AGG | - | chr4_1:72965911-72965930 | Msa0570670:CDS | 35.0% | |
| AGATCACTGGAATTCAAGTA+GGG | - | chr4_1:72965912-72965931 | Msa0570670:CDS | 35.0% | |
| TTGTAAATGTTGATCACTGC+TGG | + | chr4_1:72965986-72966005 | None:intergenic | 35.0% | |
| ! | TGCTCTAGTTCAATTAGGTT+TGG | - | chr4_1:72966006-72966025 | Msa0570670:CDS | 35.0% |
| AGTTTCAGAAGTGAAATCTC+TGG | - | chr4_1:72966100-72966119 | Msa0570670:CDS | 35.0% | |
| TATTAGGATCAACCATTCCT+TGG | + | chr4_1:72966255-72966274 | None:intergenic | 35.0% | |
| !! | GTTTTAATGGGATAGAGGTT+AGG | - | chr4_1:72966344-72966363 | Msa0570670:CDS | 35.0% |
| AAAGGTGACTCTGATGAAAT+TGG | - | chr4_1:72966391-72966410 | Msa0570670:CDS | 35.0% | |
| AGGAGACAAATGAAGAATGA+AGG | - | chr4_1:72966457-72966476 | Msa0570670:CDS | 35.0% | |
| TAAACCATAGTTCCTTTCTG+AGG | + | chr4_1:72966560-72966579 | None:intergenic | 35.0% | |
| !!! | TTTTTTTACCTTTGTCCCAG+TGG | + | chr4_1:72966677-72966696 | None:intergenic | 35.0% |
| !!! | CTAGCATTTTTTCTCTCTGC+AGG | - | chr4_1:72965509-72965528 | Msa0570670:CDS | 40.0% |
| ! | GCGTCATTTGGAATCAACTA+TGG | - | chr4_1:72965656-72965675 | Msa0570670:CDS | 40.0% |
| !!! | CCTAGTACTTTTTCTGGTTG+TGG | + | chr4_1:72965701-72965720 | None:intergenic | 40.0% |
| !! | CCACAACCAGAAAAAGTACT+AGG | - | chr4_1:72965698-72965717 | Msa0570670:CDS | 40.0% |
| !! | GCGAAAGCTTTAAGAATCTG+TGG | + | chr4_1:72965773-72965792 | None:intergenic | 40.0% |
| ATCCACAACAAGCACTTCAA+TGG | - | chr4_1:72965852-72965871 | Msa0570670:CDS | 40.0% | |
| TCCACAACAAGCACTTCAAT+GGG | - | chr4_1:72965853-72965872 | Msa0570670:CDS | 40.0% | |
| ATTCCAGTGATCTTTGTGTC+TGG | + | chr4_1:72965905-72965924 | None:intergenic | 40.0% | |
| TGAAACTACCAACTGAAGGA+GGG | + | chr4_1:72966087-72966106 | None:intergenic | 40.0% | |
| !! | CTTCTGAAACTACCAACTGA+AGG | + | chr4_1:72966091-72966110 | None:intergenic | 40.0% |
| ! | GGATATGCATTGACCCAAAA+GGG | + | chr4_1:72966169-72966188 | None:intergenic | 40.0% |
| ! | AGGATATGCATTGACCCAAA+AGG | + | chr4_1:72966170-72966189 | None:intergenic | 40.0% |
| ! | TCATCAGAGTCACCTTTTGA+TGG | + | chr4_1:72966388-72966407 | None:intergenic | 40.0% |
| !!! | CTAGCATTTTTTCTCTCTGC+AGG | - | chr4_1:72965509-72965528 | Msa0570670:CDS | 40.0% |
| ! | GCGTCATTTGGAATCAACTA+TGG | - | chr4_1:72965656-72965675 | Msa0570670:CDS | 40.0% |
| !!! | CCTAGTACTTTTTCTGGTTG+TGG | + | chr4_1:72965701-72965720 | None:intergenic | 40.0% |
| !! | CCACAACCAGAAAAAGTACT+AGG | - | chr4_1:72965698-72965717 | Msa0570670:CDS | 40.0% |
| !! | GCGAAAGCTTTAAGAATCTG+TGG | + | chr4_1:72965773-72965792 | None:intergenic | 40.0% |
| ATCCACAACAAGCACTTCAA+TGG | - | chr4_1:72965852-72965871 | Msa0570670:CDS | 40.0% | |
| TCCACAACAAGCACTTCAAT+GGG | - | chr4_1:72965853-72965872 | Msa0570670:CDS | 40.0% | |
| ATTCCAGTGATCTTTGTGTC+TGG | + | chr4_1:72965905-72965924 | None:intergenic | 40.0% | |
| TGAAACTACCAACTGAAGGA+GGG | + | chr4_1:72966087-72966106 | None:intergenic | 40.0% | |
| !! | CTTCTGAAACTACCAACTGA+AGG | + | chr4_1:72966091-72966110 | None:intergenic | 40.0% |
| ! | GGATATGCATTGACCCAAAA+GGG | + | chr4_1:72966169-72966188 | None:intergenic | 40.0% |
| ! | AGGATATGCATTGACCCAAA+AGG | + | chr4_1:72966170-72966189 | None:intergenic | 40.0% |
| ! | TCATCAGAGTCACCTTTTGA+TGG | + | chr4_1:72966388-72966407 | None:intergenic | 40.0% |
| ! | ACCCATTGAAGTGCTTGTTG+TGG | + | chr4_1:72965857-72965876 | None:intergenic | 45.0% |
| CTTCCAGACACAAAGATCAC+TGG | - | chr4_1:72965899-72965918 | Msa0570670:CDS | 45.0% | |
| GAATCTTACCCTCCTTCAGT+TGG | - | chr4_1:72966076-72966095 | Msa0570670:CDS | 45.0% | |
| CTGAAACTACCAACTGAAGG+AGG | + | chr4_1:72966088-72966107 | None:intergenic | 45.0% | |
| GGATCAACCATTCCTTGGTT+AGG | + | chr4_1:72966250-72966269 | None:intergenic | 45.0% | |
| !! | TTAGGGTTTCTGAGACTGGT+TGG | - | chr4_1:72966362-72966381 | Msa0570670:CDS | 45.0% |
| AGAATGGACCAACCTCAGAA+AGG | - | chr4_1:72966545-72966564 | Msa0570670:intron | 45.0% | |
| !! | CCATAGTTCCTTTCTGAGGT+TGG | + | chr4_1:72966556-72966575 | None:intergenic | 45.0% |
| CCAACCTCAGAAAGGAACTA+TGG | - | chr4_1:72966553-72966572 | Msa0570670:intron | 45.0% | |
| ! | ACCCATTGAAGTGCTTGTTG+TGG | + | chr4_1:72965857-72965876 | None:intergenic | 45.0% |
| CTTCCAGACACAAAGATCAC+TGG | - | chr4_1:72965899-72965918 | Msa0570670:CDS | 45.0% | |
| GAATCTTACCCTCCTTCAGT+TGG | - | chr4_1:72966076-72966095 | Msa0570670:CDS | 45.0% | |
| CTGAAACTACCAACTGAAGG+AGG | + | chr4_1:72966088-72966107 | None:intergenic | 45.0% | |
| GGATCAACCATTCCTTGGTT+AGG | + | chr4_1:72966250-72966269 | None:intergenic | 45.0% | |
| !! | TTAGGGTTTCTGAGACTGGT+TGG | - | chr4_1:72966362-72966381 | Msa0570670:CDS | 45.0% |
| AGAATGGACCAACCTCAGAA+AGG | - | chr4_1:72966545-72966564 | Msa0570670:intron | 45.0% | |
| !! | CCATAGTTCCTTTCTGAGGT+TGG | + | chr4_1:72966556-72966575 | None:intergenic | 45.0% |
| CCAACCTCAGAAAGGAACTA+TGG | - | chr4_1:72966553-72966572 | Msa0570670:intron | 45.0% | |
| AGCTTTCGCCAATTCAGACG+TGG | - | chr4_1:72965784-72965803 | Msa0570670:CDS | 50.0% | |
| !! | GAGGTTAGGGTTTCTGAGAC+TGG | - | chr4_1:72966358-72966377 | Msa0570670:CDS | 50.0% |
| ! | GAGACTGGTTGGCCATCAAA+AGG | - | chr4_1:72966373-72966392 | Msa0570670:CDS | 50.0% |
| TCTCTTACCTCTTCTGCCAC+TGG | - | chr4_1:72966658-72966677 | Msa0570670:CDS | 50.0% | |
| CTCTTACCTCTTCTGCCACT+GGG | - | chr4_1:72966659-72966678 | Msa0570670:CDS | 50.0% | |
| AGCTTTCGCCAATTCAGACG+TGG | - | chr4_1:72965784-72965803 | Msa0570670:CDS | 50.0% | |
| !! | GAGGTTAGGGTTTCTGAGAC+TGG | - | chr4_1:72966358-72966377 | Msa0570670:CDS | 50.0% |
| ! | GAGACTGGTTGGCCATCAAA+AGG | - | chr4_1:72966373-72966392 | Msa0570670:CDS | 50.0% |
| TCTCTTACCTCTTCTGCCAC+TGG | - | chr4_1:72966658-72966677 | Msa0570670:CDS | 50.0% | |
| CTCTTACCTCTTCTGCCACT+GGG | - | chr4_1:72966659-72966678 | Msa0570670:CDS | 50.0% | |
| TTCGCACGTGTCGCGTCATT+TGG | - | chr4_1:72965644-72965663 | Msa0570670:CDS | 55.0% | |
| CTTTGTCCCAGTGGCAGAAG+AGG | + | chr4_1:72966668-72966687 | None:intergenic | 55.0% | |
| CTCTTCTGCCACTGGGACAA+AGG | - | chr4_1:72966666-72966685 | Msa0570670:CDS | 55.0% | |
| TTCGCACGTGTCGCGTCATT+TGG | - | chr4_1:72965644-72965663 | Msa0570670:CDS | 55.0% | |
| CTTTGTCCCAGTGGCAGAAG+AGG | + | chr4_1:72966668-72966687 | None:intergenic | 55.0% | |
| CTCTTCTGCCACTGGGACAA+AGG | - | chr4_1:72966666-72966685 | Msa0570670:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 72965413 | 72966762 | 72965413 | ID=Msa0570670;Name=Msa0570670 |
| chr4_1 | mRNA | 72965413 | 72966762 | 72965413 | ID=Msa0570670-mRNA-1;Parent=Msa0570670;Name=Msa0570670-mRNA-1;_AED=0.10;_eAED=0.10;_QI=54|1|0.5|1|1|1|2|0|397 |
| chr4_1 | exon | 72965413 | 72966542 | 72965413 | ID=Msa0570670-mRNA-1:exon:24982;Parent=Msa0570670-mRNA-1 |
| chr4_1 | exon | 72966645 | 72966762 | 72966645 | ID=Msa0570670-mRNA-1:exon:24981;Parent=Msa0570670-mRNA-1 |
| chr4_1 | five_prime_UTR | 72966709 | 72966762 | 72966709 | ID=Msa0570670-mRNA-1:five_prime_utr;Parent=Msa0570670-mRNA-1 |
| chr4_1 | CDS | 72966645 | 72966708 | 72966645 | ID=Msa0570670-mRNA-1:cds;Parent=Msa0570670-mRNA-1 |
| chr4_1 | CDS | 72965413 | 72966542 | 72965413 | ID=Msa0570670-mRNA-1:cds;Parent=Msa0570670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
