Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693470 | KEH30835.1 | 96.114 | 386 | 15 | 0 | 1 | 386 | 1 | 386 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693470 | sp|Q9ZQG9|E1314_ARATH | 51.020 | 343 | 161 | 2 | 33 | 374 | 30 | 366 | 2.79e-121 | 359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693470 | A0A072UYA7 | 96.114 | 386 | 15 | 0 | 1 | 386 | 1 | 386 | 0.0 | 758 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0610760 | Msa0693470 | 0.926495 | 4.338166e-91 | -8.615850e-47 |
| Msa0693470 | Msa0743510 | 0.809113 | 2.221222e-50 | -8.615850e-47 |
| Msa0693470 | Msa0772490 | 0.804420 | 2.178638e-49 | -8.615850e-47 |
| Msa0693470 | Msa0798450 | 0.802499 | 5.449312e-49 | -8.615850e-47 |
| Msa0693470 | Msa1221960 | 0.816317 | 5.885479e-52 | -8.615850e-47 |
| Msa0693470 | Msa1265020 | 0.802406 | 5.696753e-49 | -8.615850e-47 |
| Msa0693470 | Msa1337850 | 0.803755 | 2.996540e-49 | -8.615850e-47 |
| Msa0693470 | Msa1404570 | 0.889413 | 2.477563e-73 | -8.615850e-47 |
| Msa0693470 | Msa1437520 | 0.938583 | 5.292210e-99 | -8.615850e-47 |
| Msa0570670 | Msa0693470 | 0.909757 | 3.998830e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693470 | MtrunA17_Chr4g0043851 | 92.911 | 395 | 26 | 1 | 1 | 395 | 1 | 393 | 0.0 | 744 |
| Msa0693470 | MtrunA17_Chr2g0285901 | 76.106 | 339 | 75 | 2 | 12 | 350 | 9 | 341 | 0.0 | 541 |
| Msa0693470 | MtrunA17_Chr1g0189111 | 56.535 | 329 | 142 | 1 | 23 | 351 | 22 | 349 | 3.66e-137 | 398 |
| Msa0693470 | MtrunA17_Chr4g0026321 | 52.941 | 323 | 152 | 0 | 31 | 353 | 28 | 350 | 1.84e-126 | 369 |
| Msa0693470 | MtrunA17_Chr2g0321511 | 50.000 | 338 | 167 | 1 | 13 | 350 | 10 | 345 | 1.71e-122 | 360 |
| Msa0693470 | MtrunA17_Chr4g0003281 | 48.235 | 340 | 175 | 1 | 27 | 365 | 35 | 374 | 1.77e-117 | 347 |
| Msa0693470 | MtrunA17_Chr4g0064021 | 43.490 | 361 | 201 | 2 | 27 | 386 | 21 | 379 | 7.47e-104 | 312 |
| Msa0693470 | MtrunA17_Chr5g0439251 | 49.538 | 325 | 161 | 3 | 29 | 351 | 22 | 345 | 6.82e-100 | 305 |
| Msa0693470 | MtrunA17_Chr3g0144531 | 45.299 | 351 | 190 | 2 | 14 | 362 | 9 | 359 | 1.81e-99 | 303 |
| Msa0693470 | MtrunA17_Chr4g0034901 | 45.014 | 351 | 191 | 2 | 14 | 362 | 10 | 360 | 2.33e-98 | 300 |
| Msa0693470 | MtrunA17_Chr1g0155001 | 46.273 | 322 | 171 | 2 | 32 | 351 | 24 | 345 | 1.11e-96 | 295 |
| Msa0693470 | MtrunA17_Chr3g0119541 | 45.217 | 345 | 181 | 4 | 25 | 362 | 19 | 362 | 2.59e-95 | 289 |
| Msa0693470 | MtrunA17_Chr1g0177171 | 45.706 | 326 | 174 | 3 | 28 | 351 | 34 | 358 | 2.63e-95 | 293 |
| Msa0693470 | MtrunA17_Chr1g0146831 | 45.988 | 324 | 169 | 3 | 26 | 347 | 25 | 344 | 2.29e-93 | 285 |
| Msa0693470 | MtrunA17_Chr8g0389741 | 40.369 | 379 | 214 | 4 | 8 | 382 | 1 | 371 | 1.78e-89 | 279 |
| Msa0693470 | MtrunA17_Chr6g0487261 | 45.312 | 320 | 173 | 2 | 33 | 351 | 28 | 346 | 1.26e-87 | 274 |
| Msa0693470 | MtrunA17_Chr7g0234821 | 42.769 | 325 | 180 | 5 | 33 | 352 | 27 | 350 | 1.36e-86 | 270 |
| Msa0693470 | MtrunA17_Chr7g0223961 | 44.444 | 324 | 172 | 5 | 29 | 350 | 20 | 337 | 5.58e-86 | 268 |
| Msa0693470 | MtrunA17_Chr8g0339191 | 40.923 | 325 | 186 | 5 | 33 | 352 | 30 | 353 | 2.04e-81 | 257 |
| Msa0693470 | MtrunA17_Chr4g0046311 | 39.091 | 330 | 193 | 5 | 30 | 352 | 21 | 349 | 6.18e-78 | 248 |
| Msa0693470 | MtrunA17_Chr4g0043511 | 41.667 | 348 | 194 | 7 | 7 | 350 | 37 | 379 | 2.39e-77 | 249 |
| Msa0693470 | MtrunA17_Chr3g0121271 | 38.658 | 313 | 187 | 3 | 30 | 338 | 24 | 335 | 8.08e-77 | 246 |
| Msa0693470 | MtrunA17_Chr4g0075031 | 39.144 | 327 | 194 | 3 | 32 | 354 | 45 | 370 | 5.08e-75 | 242 |
| Msa0693470 | MtrunA17_Chr8g0378621 | 35.013 | 377 | 227 | 6 | 8 | 380 | 7 | 369 | 7.75e-75 | 241 |
| Msa0693470 | MtrunA17_Chr4g0039011 | 40.432 | 324 | 181 | 6 | 30 | 353 | 40 | 351 | 8.59e-74 | 234 |
| Msa0693470 | MtrunA17_Chr1g0161011 | 38.506 | 348 | 208 | 4 | 8 | 351 | 1 | 346 | 1.16e-73 | 238 |
| Msa0693470 | MtrunA17_Chr5g0434591 | 37.892 | 351 | 205 | 5 | 8 | 351 | 1 | 345 | 1.95e-73 | 237 |
| Msa0693470 | MtrunA17_Chr3g0110371 | 36.826 | 334 | 206 | 3 | 10 | 339 | 2 | 334 | 4.85e-69 | 226 |
| Msa0693470 | MtrunA17_Chr4g0038981 | 38.941 | 321 | 183 | 7 | 26 | 346 | 17 | 324 | 5.13e-67 | 215 |
| Msa0693470 | MtrunA17_Chr4g0038971 | 38.750 | 320 | 183 | 8 | 29 | 348 | 20 | 326 | 1.16e-66 | 214 |
| Msa0693470 | MtrunA17_Chr4g0038961 | 38.580 | 324 | 184 | 8 | 26 | 348 | 17 | 326 | 3.53e-66 | 213 |
| Msa0693470 | MtrunA17_Chr4g0038941 | 39.319 | 323 | 183 | 6 | 26 | 348 | 46 | 355 | 4.31e-66 | 214 |
| Msa0693470 | MtrunA17_Chr2g0294601 | 38.769 | 325 | 189 | 7 | 30 | 352 | 57 | 373 | 1.38e-63 | 208 |
| Msa0693470 | MtrunA17_Chr7g0250301 | 34.365 | 323 | 202 | 6 | 25 | 346 | 1 | 314 | 7.91e-63 | 204 |
| Msa0693470 | MtrunA17_Chr4g0039071 | 38.629 | 321 | 187 | 7 | 31 | 349 | 24 | 336 | 5.06e-62 | 204 |
| Msa0693470 | MtrunA17_Chr2g0294591 | 35.542 | 332 | 202 | 8 | 30 | 358 | 28 | 350 | 1.03e-58 | 195 |
| Msa0693470 | MtrunA17_Chr1g0174261 | 38.754 | 289 | 167 | 6 | 62 | 348 | 2 | 282 | 1.71e-57 | 191 |
| Msa0693470 | MtrunA17_Chr4g0039021 | 37.676 | 284 | 167 | 5 | 58 | 340 | 7 | 281 | 2.04e-55 | 184 |
| Msa0693470 | MtrunA17_Chr1g0148391 | 33.708 | 356 | 215 | 13 | 6 | 352 | 4 | 347 | 5.00e-52 | 180 |
| Msa0693470 | MtrunA17_Chr7g0250321 | 33.219 | 292 | 184 | 6 | 7 | 297 | 5 | 286 | 2.23e-50 | 171 |
| Msa0693470 | MtrunA17_Chr4g0062771 | 31.405 | 363 | 225 | 13 | 2 | 353 | 6 | 355 | 4.07e-48 | 170 |
| Msa0693470 | MtrunA17_Chr2g0290821 | 32.537 | 335 | 211 | 10 | 27 | 351 | 23 | 352 | 5.58e-48 | 170 |
| Msa0693470 | MtrunA17_Chr3g0138741 | 32.370 | 346 | 221 | 10 | 14 | 352 | 13 | 352 | 8.89e-48 | 169 |
| Msa0693470 | MtrunA17_Chr6g0461601 | 32.558 | 344 | 207 | 11 | 11 | 341 | 8 | 339 | 1.36e-47 | 169 |
| Msa0693470 | MtrunA17_Chr4g0069801 | 30.899 | 356 | 227 | 13 | 6 | 352 | 4 | 349 | 9.85e-47 | 166 |
| Msa0693470 | MtrunA17_Chr7g0253091 | 33.038 | 339 | 207 | 11 | 25 | 352 | 19 | 348 | 1.99e-46 | 166 |
| Msa0693470 | MtrunA17_Chr8g0383311 | 29.577 | 355 | 235 | 11 | 13 | 359 | 24 | 371 | 8.56e-45 | 161 |
| Msa0693470 | MtrunA17_Chr4g0076581 | 33.233 | 331 | 206 | 11 | 30 | 351 | 31 | 355 | 9.12e-44 | 159 |
| Msa0693470 | MtrunA17_Chr5g0436361 | 34.967 | 306 | 184 | 10 | 48 | 347 | 53 | 349 | 5.76e-42 | 151 |
| Msa0693470 | MtrunA17_Chr3g0105981 | 32.635 | 334 | 208 | 10 | 31 | 356 | 26 | 350 | 1.59e-41 | 151 |
| Msa0693470 | MtrunA17_Chr2g0306311 | 29.213 | 356 | 211 | 12 | 30 | 350 | 28 | 377 | 7.61e-39 | 145 |
| Msa0693470 | MtrunA17_Chr3g0129341 | 29.532 | 342 | 224 | 13 | 29 | 362 | 31 | 363 | 2.31e-37 | 141 |
| Msa0693470 | MtrunA17_Chr4g0018771 | 43.519 | 108 | 54 | 3 | 254 | 361 | 86 | 186 | 7.37e-20 | 87.4 |
| Msa0693470 | MtrunA17_Chr4g0018861 | 42.478 | 113 | 58 | 3 | 249 | 361 | 79 | 184 | 1.43e-19 | 86.7 |
| Msa0693470 | MtrunA17_Chr2g0294581 | 34.211 | 152 | 91 | 3 | 30 | 179 | 74 | 218 | 2.10e-17 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693470 | AT4G18340.1 | 63.073 | 371 | 137 | 0 | 3 | 373 | 5 | 375 | 2.40e-175 | 494 |
| Msa0693470 | AT4G18340.2 | 62.634 | 372 | 139 | 0 | 3 | 374 | 5 | 376 | 3.00e-175 | 494 |
| Msa0693470 | AT1G30080.2 | 64.873 | 353 | 120 | 3 | 1 | 349 | 1 | 353 | 6.30e-169 | 478 |
| Msa0693470 | AT1G30080.1 | 64.873 | 353 | 120 | 3 | 1 | 349 | 1 | 353 | 7.50e-169 | 478 |
| Msa0693470 | AT2G27500.2 | 51.312 | 343 | 160 | 2 | 33 | 374 | 30 | 366 | 8.71e-123 | 360 |
| Msa0693470 | AT2G27500.1 | 51.020 | 343 | 161 | 2 | 33 | 374 | 30 | 366 | 2.84e-122 | 359 |
| Msa0693470 | AT1G32860.1 | 50.464 | 323 | 158 | 1 | 31 | 351 | 28 | 350 | 8.70e-121 | 357 |
| Msa0693470 | AT5G42100.2 | 52.000 | 325 | 153 | 2 | 29 | 350 | 24 | 348 | 1.99e-116 | 346 |
| Msa0693470 | AT5G42100.1 | 52.000 | 325 | 153 | 2 | 29 | 350 | 24 | 348 | 3.04e-116 | 345 |
| Msa0693470 | AT3G15800.1 | 48.094 | 341 | 174 | 3 | 19 | 357 | 31 | 370 | 1.62e-114 | 340 |
| Msa0693470 | AT2G26600.1 | 43.895 | 344 | 191 | 2 | 27 | 369 | 29 | 371 | 6.79e-106 | 318 |
| Msa0693470 | AT4G26830.1 | 47.175 | 354 | 181 | 4 | 8 | 359 | 1 | 350 | 6.89e-105 | 317 |
| Msa0693470 | AT4G26830.2 | 49.240 | 329 | 161 | 4 | 33 | 359 | 30 | 354 | 1.95e-103 | 314 |
| Msa0693470 | AT5G55180.1 | 47.181 | 337 | 169 | 4 | 18 | 352 | 19 | 348 | 6.67e-101 | 307 |
| Msa0693470 | AT5G55180.2 | 47.463 | 335 | 167 | 4 | 18 | 350 | 19 | 346 | 9.29e-101 | 307 |
| Msa0693470 | AT2G27500.3 | 50.340 | 294 | 139 | 2 | 82 | 374 | 1 | 288 | 9.92e-101 | 301 |
| Msa0693470 | AT5G24318.4 | 45.820 | 323 | 169 | 3 | 30 | 350 | 28 | 346 | 2.61e-97 | 295 |
| Msa0693470 | AT5G24318.2 | 43.889 | 360 | 190 | 6 | 30 | 382 | 28 | 382 | 1.46e-96 | 296 |
| Msa0693470 | AT2G05790.1 | 46.273 | 322 | 170 | 3 | 29 | 348 | 22 | 342 | 2.50e-96 | 296 |
| Msa0693470 | AT5G24318.1 | 43.889 | 360 | 190 | 6 | 30 | 382 | 28 | 382 | 2.51e-96 | 295 |
| Msa0693470 | AT4G34480.2 | 46.012 | 326 | 175 | 1 | 33 | 357 | 27 | 352 | 1.11e-93 | 285 |
| Msa0693470 | AT5G42720.1 | 44.444 | 342 | 188 | 2 | 12 | 351 | 6 | 347 | 1.99e-93 | 287 |
| Msa0693470 | AT4G34480.1 | 45.000 | 340 | 181 | 2 | 13 | 351 | 12 | 346 | 5.15e-91 | 283 |
| Msa0693470 | AT5G56590.1 | 44.340 | 318 | 175 | 2 | 33 | 348 | 27 | 344 | 8.92e-91 | 283 |
| Msa0693470 | AT2G16230.1 | 43.692 | 325 | 182 | 1 | 33 | 356 | 26 | 350 | 1.58e-90 | 282 |
| Msa0693470 | AT3G07320.1 | 41.231 | 325 | 185 | 5 | 33 | 352 | 26 | 349 | 5.64e-85 | 266 |
| Msa0693470 | AT2G26600.2 | 45.221 | 272 | 148 | 1 | 98 | 369 | 7 | 277 | 7.49e-85 | 260 |
| Msa0693470 | AT3G13560.4 | 40.741 | 324 | 187 | 3 | 27 | 346 | 21 | 343 | 1.13e-80 | 256 |
| Msa0693470 | AT3G13560.1 | 40.741 | 324 | 187 | 3 | 27 | 346 | 21 | 343 | 1.13e-80 | 256 |
| Msa0693470 | AT3G13560.2 | 40.741 | 324 | 187 | 3 | 27 | 346 | 21 | 343 | 1.13e-80 | 256 |
| Msa0693470 | AT3G13560.5 | 40.741 | 324 | 187 | 3 | 27 | 346 | 21 | 343 | 1.13e-80 | 256 |
| Msa0693470 | AT3G13560.3 | 40.741 | 324 | 187 | 3 | 27 | 346 | 21 | 343 | 1.13e-80 | 256 |
| Msa0693470 | AT4G14080.1 | 39.506 | 324 | 191 | 4 | 29 | 348 | 39 | 361 | 9.07e-78 | 248 |
| Msa0693470 | AT1G11820.1 | 39.329 | 328 | 194 | 3 | 33 | 356 | 45 | 371 | 2.63e-77 | 244 |
| Msa0693470 | AT3G23770.1 | 38.623 | 334 | 197 | 5 | 26 | 352 | 31 | 363 | 1.19e-76 | 245 |
| Msa0693470 | AT1G11820.3 | 39.628 | 323 | 190 | 3 | 33 | 351 | 45 | 366 | 4.91e-76 | 244 |
| Msa0693470 | AT1G11820.2 | 39.937 | 318 | 186 | 3 | 33 | 346 | 45 | 361 | 5.85e-76 | 244 |
| Msa0693470 | AT2G01630.2 | 40.432 | 324 | 188 | 3 | 32 | 351 | 23 | 345 | 8.22e-75 | 238 |
| Msa0693470 | AT4G29360.1 | 41.925 | 322 | 185 | 2 | 26 | 346 | 21 | 341 | 1.05e-74 | 242 |
| Msa0693470 | AT4G29360.2 | 41.925 | 322 | 185 | 2 | 26 | 346 | 31 | 351 | 1.22e-74 | 242 |
| Msa0693470 | AT2G01630.3 | 40.432 | 324 | 188 | 3 | 32 | 351 | 23 | 345 | 1.58e-74 | 239 |
| Msa0693470 | AT2G01630.1 | 40.432 | 324 | 188 | 3 | 32 | 351 | 23 | 345 | 9.49e-74 | 238 |
| Msa0693470 | AT3G55430.1 | 39.939 | 328 | 185 | 9 | 27 | 350 | 24 | 343 | 5.99e-72 | 232 |
| Msa0693470 | AT3G46570.1 | 41.212 | 330 | 183 | 8 | 26 | 350 | 21 | 344 | 2.96e-69 | 223 |
| Msa0693470 | AT1G66250.1 | 38.788 | 330 | 191 | 5 | 21 | 346 | 26 | 348 | 3.51e-68 | 224 |
| Msa0693470 | AT5G20390.1 | 37.391 | 345 | 204 | 8 | 1 | 342 | 1 | 336 | 7.62e-68 | 218 |
| Msa0693470 | AT3G57270.1 | 38.871 | 319 | 183 | 8 | 33 | 348 | 28 | 337 | 9.21e-66 | 213 |
| Msa0693470 | AT5G20340.1 | 39.009 | 323 | 182 | 7 | 24 | 342 | 35 | 346 | 2.91e-64 | 209 |
| Msa0693470 | AT4G34480.3 | 47.210 | 233 | 123 | 0 | 119 | 351 | 3 | 235 | 9.04e-63 | 207 |
| Msa0693470 | AT4G16260.1 | 34.670 | 349 | 211 | 6 | 8 | 352 | 1 | 336 | 3.57e-62 | 204 |
| Msa0693470 | AT5G20330.1 | 37.830 | 341 | 189 | 8 | 14 | 342 | 8 | 337 | 4.44e-62 | 203 |
| Msa0693470 | AT3G61810.1 | 36.364 | 330 | 188 | 6 | 32 | 351 | 55 | 372 | 6.46e-62 | 204 |
| Msa0693470 | AT2G39640.1 | 35.942 | 345 | 208 | 7 | 10 | 350 | 5 | 340 | 8.32e-62 | 208 |
| Msa0693470 | AT1G33220.1 | 37.574 | 338 | 188 | 8 | 14 | 338 | 8 | 335 | 3.01e-61 | 201 |
| Msa0693470 | AT3G57260.1 | 36.982 | 338 | 195 | 10 | 13 | 348 | 15 | 336 | 7.40e-61 | 200 |
| Msa0693470 | AT3G57260.2 | 36.982 | 338 | 195 | 10 | 13 | 348 | 31 | 352 | 9.86e-61 | 200 |
| Msa0693470 | AT1G77780.1 | 34.195 | 348 | 216 | 9 | 17 | 362 | 8 | 344 | 2.93e-60 | 199 |
| Msa0693470 | AT4G16260.2 | 35.350 | 314 | 195 | 4 | 39 | 352 | 2 | 307 | 7.40e-59 | 194 |
| Msa0693470 | AT5G24318.3 | 43.673 | 245 | 129 | 4 | 143 | 382 | 3 | 243 | 3.04e-58 | 192 |
| Msa0693470 | AT1G77790.1 | 35.465 | 344 | 209 | 8 | 10 | 348 | 6 | 341 | 9.62e-58 | 192 |
| Msa0693470 | AT3G57240.1 | 34.462 | 325 | 198 | 8 | 25 | 348 | 28 | 338 | 1.19e-52 | 179 |
| Msa0693470 | AT4G31140.1 | 30.899 | 356 | 229 | 11 | 4 | 352 | 3 | 348 | 3.56e-47 | 168 |
| Msa0693470 | AT3G24330.1 | 33.144 | 353 | 215 | 14 | 13 | 352 | 18 | 362 | 1.11e-46 | 167 |
| Msa0693470 | AT5G20560.1 | 33.227 | 313 | 193 | 8 | 33 | 340 | 35 | 336 | 4.88e-46 | 161 |
| Msa0693470 | AT5G64790.1 | 33.230 | 322 | 198 | 11 | 29 | 341 | 25 | 338 | 4.24e-45 | 162 |
| Msa0693470 | AT5G18220.1 | 32.121 | 330 | 211 | 8 | 29 | 352 | 27 | 349 | 1.72e-43 | 158 |
| Msa0693470 | AT2G19440.2 | 31.897 | 348 | 220 | 11 | 14 | 352 | 3 | 342 | 2.78e-42 | 154 |
| Msa0693470 | AT2G19440.1 | 31.897 | 348 | 220 | 11 | 14 | 352 | 3 | 342 | 2.78e-42 | 154 |
| Msa0693470 | AT1G64760.1 | 32.249 | 338 | 210 | 11 | 29 | 356 | 22 | 350 | 3.77e-42 | 154 |
| Msa0693470 | AT1G64760.2 | 32.249 | 338 | 210 | 11 | 29 | 356 | 22 | 350 | 3.77e-42 | 154 |
| Msa0693470 | AT4G17180.1 | 30.514 | 331 | 210 | 11 | 30 | 351 | 23 | 342 | 1.46e-41 | 152 |
| Msa0693470 | AT5G58480.1 | 31.804 | 327 | 208 | 9 | 29 | 347 | 23 | 342 | 1.51e-41 | 152 |
| Msa0693470 | AT5G58090.1 | 30.422 | 332 | 218 | 9 | 28 | 352 | 18 | 343 | 1.72e-41 | 152 |
| Msa0693470 | AT3G55780.1 | 32.390 | 318 | 199 | 10 | 46 | 355 | 49 | 358 | 3.84e-41 | 149 |
| Msa0693470 | AT5G20870.1 | 31.680 | 363 | 221 | 14 | 5 | 351 | 6 | 357 | 6.88e-41 | 151 |
| Msa0693470 | AT3G04010.1 | 31.778 | 343 | 211 | 12 | 9 | 341 | 14 | 343 | 8.29e-40 | 148 |
Find 66 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGAACAAGATATTGAATT+AGG | 0.153002 | 4_4:+62371006 | None:intergenic |
| ACATTTGCCATTGCTAAATT+AGG | 0.171344 | 4_4:-62370648 | Msa0693470:CDS |
| TATGATTCCAATCTCATTCT+AGG | 0.189809 | 4_4:+62370477 | None:intergenic |
| TCATAATGTAAATTTGTATT+AGG | 0.242481 | 4_4:+62370702 | None:intergenic |
| GATAATTTCCACGTCTGAAT+TGG | 0.275744 | 4_4:+62371178 | None:intergenic |
| ATATTGATTTAGAGGGAAAT+AGG | 0.284181 | 4_4:+62371534 | None:intergenic |
| CTAAATAACTTGTATATTGT+TGG | 0.296342 | 4_4:+62370240 | None:intergenic |
| TTCGCACGTGTCGCGTCATT+TGG | 0.301924 | 4_4:-62371326 | Msa0693470:CDS |
| TAGTCTAGAGATATTTGATT+AGG | 0.302492 | 4_4:+62370759 | None:intergenic |
| TACAATGCTCTAGTTCAATT+AGG | 0.318143 | 4_4:-62370969 | Msa0693470:CDS |
| TGTGACAAATATTGATTTAG+AGG | 0.321820 | 4_4:+62371526 | None:intergenic |
| TGCTCTAGTTCAATTAGGTT+TGG | 0.329748 | 4_4:-62370964 | Msa0693470:CDS |
| CTTGTTGTGGATCATTTAAT+TGG | 0.341370 | 4_4:+62371129 | None:intergenic |
| ATCTTTGTGTCTGGAAGATA+TGG | 0.358675 | 4_4:+62371077 | None:intergenic |
| GAGGTTAGGGTTTCTGAGAC+TGG | 0.362945 | 4_4:-62370612 | Msa0693470:CDS |
| AGTCTAGAGATATTTGATTA+GGG | 0.367834 | 4_4:+62370760 | None:intergenic |
| GTAAGAGAAATTGAAGTAGA+AGG | 0.368771 | 4_4:+62370327 | None:intergenic |
| TTTGAATCCTAGAATGAGAT+TGG | 0.371338 | 4_4:-62370484 | Msa0693470:CDS |
| AAAGGTGACTCTGATGAAAT+TGG | 0.380257 | 4_4:-62370579 | Msa0693470:CDS |
| GGATCAACCATTCCTTGGTT+AGG | 0.386797 | 4_4:+62370723 | None:intergenic |
| TCATTCTTATAAGCAAAATA+AGG | 0.388117 | 4_4:+62370783 | None:intergenic |
| GCGTCATTTGGAATCAACTA+TGG | 0.393043 | 4_4:-62371314 | Msa0693470:CDS |
| TTTAATGAAAATATGAAGAA+TGG | 0.404108 | 4_4:-62370441 | Msa0693470:CDS |
| TGGAACAAGATATTGAATTA+GGG | 0.410253 | 4_4:+62371007 | None:intergenic |
| TGGAAGATATGGTTTGATAT+TGG | 0.415025 | 4_4:+62371088 | None:intergenic |
| CCAACCTCAGAAAGGAACTA+TGG | 0.427631 | 4_4:-62370417 | Msa0693470:CDS |
| CCATAGTTCCTTTCTGAGGT+TGG | 0.446684 | 4_4:+62370417 | None:intergenic |
| TATTAGGATCAACCATTCCT+TGG | 0.446836 | 4_4:+62370718 | None:intergenic |
| ATCCACAACAAGCACTTCAA+TGG | 0.448948 | 4_4:-62371118 | Msa0693470:CDS |
| TGATAACATGCTTTATGCTA+TGG | 0.465658 | 4_4:-62370682 | Msa0693470:CDS |
| AGGATATGCATTGACCCAAA+AGG | 0.470969 | 4_4:+62370803 | None:intergenic |
| TTGTAAGTCATACTTTCATC+AGG | 0.472826 | 4_4:+62370384 | None:intergenic |
| AAAGTATGACTTACAATGTT+GGG | 0.473433 | 4_4:-62370377 | Msa0693470:CDS |
| ATTCCAGTGATCTTTGTGTC+TGG | 0.474898 | 4_4:+62371068 | None:intergenic |
| AAGATCACTGGAATTCAAGT+AGG | 0.477367 | 4_4:-62371059 | Msa0693470:CDS |
| GGCAACATTTACTCAAAGAA+TGG | 0.488334 | 4_4:-62371501 | Msa0693470:CDS |
| GGATATGCATTGACCCAAAA+GGG | 0.491865 | 4_4:+62370804 | None:intergenic |
| TTGTAAATGTTGATCACTGC+TGG | 0.497136 | 4_4:+62370987 | None:intergenic |
| TTTATAACAAGAATTTATTG+AGG | 0.499075 | 4_4:-62370533 | Msa0693470:CDS |
| TTAGGGTTTCTGAGACTGGT+TGG | 0.504743 | 4_4:-62370608 | Msa0693470:CDS |
| CTCTTACCTCTTCTGCCACT+AGG | 0.508681 | 4_4:-62370311 | Msa0693470:CDS |
| GTGACAAATATTGATTTAGA+GGG | 0.511053 | 4_4:+62371527 | None:intergenic |
| TCAAGAACTTCTAATGAACT+AGG | 0.514280 | 4_4:+62370918 | None:intergenic |
| AATCTCATTCTAGGATTCAA+AGG | 0.515011 | 4_4:+62370486 | None:intergenic |
| AGTTTCAGAAGTGAAATCTC+TGG | 0.515867 | 4_4:-62370870 | Msa0693470:CDS |
| GAATCTTACCCTCCTTCAGC+TGG | 0.518663 | 4_4:-62370894 | Msa0693470:CDS |
| GAGACTGGTTGGCCATCAAA+AGG | 0.519791 | 4_4:-62370597 | Msa0693470:CDS |
| TCCACAACAAGCACTTCAAT+GGG | 0.523957 | 4_4:-62371117 | Msa0693470:CDS |
| ATTTAATCCTAACCAAGGAA+TGG | 0.526689 | 4_4:-62370730 | Msa0693470:CDS |
| AGGAGACAAATGAAGAATGA+AGG | 0.534907 | 4_4:-62370513 | Msa0693470:CDS |
| CTTTGTCCTAGTGGCAGAAG+AGG | 0.537253 | 4_4:+62370305 | None:intergenic |
| CTTCCAGACACAAAGATCAC+TGG | 0.544255 | 4_4:-62371071 | Msa0693470:CDS |
| CTCTTCTGCCACTAGGACAA+AGG | 0.544384 | 4_4:-62370304 | Msa0693470:CDS |
| ACCCATTGAAGTGCTTGTTG+TGG | 0.545635 | 4_4:+62371116 | None:intergenic |
| GCGAAAGCTTTAAGAATCTG+TGG | 0.549065 | 4_4:+62371200 | None:intergenic |
| ATTAAAACCTAATTTAGCAA+TGG | 0.564223 | 4_4:+62370641 | None:intergenic |
| TAAATCAATATTTGTCACAA+TGG | 0.569290 | 4_4:-62371522 | Msa0693470:exon |
| CAAACCATAGTTCCTTTCTG+AGG | 0.570996 | 4_4:+62370413 | None:intergenic |
| GAAAGTATGACTTACAATGT+TGG | 0.572069 | 4_4:-62370378 | Msa0693470:CDS |
| AGATCACTGGAATTCAAGTA+GGG | 0.581675 | 4_4:-62371058 | Msa0693470:CDS |
| CTGAAACTACCAGCTGAAGG+AGG | 0.582451 | 4_4:+62370885 | None:intergenic |
| AGCTTTCGCCAATTCAGACG+TGG | 0.610463 | 4_4:-62371186 | Msa0693470:CDS |
| AGAATGGACCAACCTCAGAA+AGG | 0.610841 | 4_4:-62370425 | Msa0693470:CDS |
| GTATTATTTAATCCTAACCA+AGG | 0.619362 | 4_4:-62370735 | Msa0693470:CDS |
| TGAAACTACCAGCTGAAGGA+GGG | 0.628259 | 4_4:+62370886 | None:intergenic |
| CTTCTGAAACTACCAGCTGA+AGG | 0.634495 | 4_4:+62370882 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATAATGTAAATTTGTATT+AGG | + | chr4_4:62371091-62371110 | None:intergenic | 15.0% |
| !! | TTTATAACAAGAATTTATTG+AGG | - | chr4_4:62371257-62371276 | Msa0693470:CDS | 15.0% |
| !! | TTTAATGAAAATATGAAGAA+TGG | - | chr4_4:62371349-62371368 | Msa0693470:intron | 15.0% |
| !! | TCATAATGTAAATTTGTATT+AGG | + | chr4_4:62371091-62371110 | None:intergenic | 15.0% |
| !! | TTTATAACAAGAATTTATTG+AGG | - | chr4_4:62371257-62371276 | Msa0693470:CDS | 15.0% |
| !! | TTTAATGAAAATATGAAGAA+TGG | - | chr4_4:62371349-62371368 | Msa0693470:intron | 15.0% |
| !! | TAAATCAATATTTGTCACAA+TGG | - | chr4_4:62370268-62370287 | Msa0693470:CDS | 20.0% |
| !! | TCATTCTTATAAGCAAAATA+AGG | + | chr4_4:62371010-62371029 | None:intergenic | 20.0% |
| !! | ATTAAAACCTAATTTAGCAA+TGG | + | chr4_4:62371152-62371171 | None:intergenic | 20.0% |
| !!! | ATTGCTAAATTAGGTTTTAA+TGG | - | chr4_4:62371151-62371170 | Msa0693470:CDS | 20.0% |
| !!! | TTGCTAAATTAGGTTTTAAT+GGG | - | chr4_4:62371152-62371171 | Msa0693470:CDS | 20.0% |
| !!! | CTAAATAACTTGTATATTGT+TGG | + | chr4_4:62371553-62371572 | None:intergenic | 20.0% |
| !! | TAAATCAATATTTGTCACAA+TGG | - | chr4_4:62370268-62370287 | Msa0693470:CDS | 20.0% |
| !! | TCATTCTTATAAGCAAAATA+AGG | + | chr4_4:62371010-62371029 | None:intergenic | 20.0% |
| !! | ATTAAAACCTAATTTAGCAA+TGG | + | chr4_4:62371152-62371171 | None:intergenic | 20.0% |
| !!! | ATTGCTAAATTAGGTTTTAA+TGG | - | chr4_4:62371151-62371170 | Msa0693470:CDS | 20.0% |
| !!! | TTGCTAAATTAGGTTTTAAT+GGG | - | chr4_4:62371152-62371171 | Msa0693470:CDS | 20.0% |
| !!! | CTAAATAACTTGTATATTGT+TGG | + | chr4_4:62371553-62371572 | None:intergenic | 20.0% |
| !!! | ATATTGATTTAGAGGGAAAT+AGG | + | chr4_4:62370259-62370278 | None:intergenic | 25.0% |
| !!! | GTGACAAATATTGATTTAGA+GGG | + | chr4_4:62370266-62370285 | None:intergenic | 25.0% |
| !!! | TGTGACAAATATTGATTTAG+AGG | + | chr4_4:62370267-62370286 | None:intergenic | 25.0% |
| ! | ATGAAAAAACAGAACAAACA+GGG | + | chr4_4:62370357-62370376 | None:intergenic | 25.0% |
| ! | TGGAACAAGATATTGAATTA+GGG | + | chr4_4:62370786-62370805 | None:intergenic | 25.0% |
| !! | AAAAACAAAATCACCCTTTT+GGG | - | chr4_4:62370973-62370992 | Msa0693470:CDS | 25.0% |
| ! | AGTCTAGAGATATTTGATTA+GGG | + | chr4_4:62371033-62371052 | None:intergenic | 25.0% |
| ! | TAGTCTAGAGATATTTGATT+AGG | + | chr4_4:62371034-62371053 | None:intergenic | 25.0% |
| ! | GTATTATTTAATCCTAACCA+AGG | - | chr4_4:62371055-62371074 | Msa0693470:CDS | 25.0% |
| ! | AAAGTATGACTTACAATGTT+GGG | - | chr4_4:62371413-62371432 | Msa0693470:intron | 25.0% |
| !!! | ATATTGATTTAGAGGGAAAT+AGG | + | chr4_4:62370259-62370278 | None:intergenic | 25.0% |
| !!! | GTGACAAATATTGATTTAGA+GGG | + | chr4_4:62370266-62370285 | None:intergenic | 25.0% |
| !!! | TGTGACAAATATTGATTTAG+AGG | + | chr4_4:62370267-62370286 | None:intergenic | 25.0% |
| ! | ATGAAAAAACAGAACAAACA+GGG | + | chr4_4:62370357-62370376 | None:intergenic | 25.0% |
| ! | TGGAACAAGATATTGAATTA+GGG | + | chr4_4:62370786-62370805 | None:intergenic | 25.0% |
| !! | AAAAACAAAATCACCCTTTT+GGG | - | chr4_4:62370973-62370992 | Msa0693470:CDS | 25.0% |
| ! | AGTCTAGAGATATTTGATTA+GGG | + | chr4_4:62371033-62371052 | None:intergenic | 25.0% |
| ! | TAGTCTAGAGATATTTGATT+AGG | + | chr4_4:62371034-62371053 | None:intergenic | 25.0% |
| ! | GTATTATTTAATCCTAACCA+AGG | - | chr4_4:62371055-62371074 | Msa0693470:CDS | 25.0% |
| ! | AAAGTATGACTTACAATGTT+GGG | - | chr4_4:62371413-62371432 | Msa0693470:intron | 25.0% |
| CATGAAAAAACAGAACAAAC+AGG | + | chr4_4:62370358-62370377 | None:intergenic | 30.0% | |
| GATTATGCAATTACAGATAC+TGG | - | chr4_4:62370437-62370456 | Msa0693470:CDS | 30.0% | |
| ! | CTTGTTGTGGATCATTTAAT+TGG | + | chr4_4:62370664-62370683 | None:intergenic | 30.0% |
| TGGAAGATATGGTTTGATAT+TGG | + | chr4_4:62370705-62370724 | None:intergenic | 30.0% | |
| CTGGAACAAGATATTGAATT+AGG | + | chr4_4:62370787-62370806 | None:intergenic | 30.0% | |
| ! | TACAATGCTCTAGTTCAATT+AGG | - | chr4_4:62370821-62370840 | Msa0693470:CDS | 30.0% |
| TCAAGAACTTCTAATGAACT+AGG | + | chr4_4:62370875-62370894 | None:intergenic | 30.0% | |
| ! | CAAAAACAAAATCACCCTTT+TGG | - | chr4_4:62370972-62370991 | Msa0693470:CDS | 30.0% |
| ATTTAATCCTAACCAAGGAA+TGG | - | chr4_4:62371060-62371079 | Msa0693470:CDS | 30.0% | |
| TGATAACATGCTTTATGCTA+TGG | - | chr4_4:62371108-62371127 | Msa0693470:CDS | 30.0% | |
| ACATTTGCCATTGCTAAATT+AGG | - | chr4_4:62371142-62371161 | Msa0693470:CDS | 30.0% | |
| !! | ATTAGGTTTTAATGGGATAG+AGG | - | chr4_4:62371159-62371178 | Msa0693470:CDS | 30.0% |
| ! | TTTTAATGGGATAGAGGTTA+GGG | - | chr4_4:62371165-62371184 | Msa0693470:CDS | 30.0% |
| !! | AATCTCATTCTAGGATTCAA+AGG | + | chr4_4:62371307-62371326 | None:intergenic | 30.0% |
| TTTGAATCCTAGAATGAGAT+TGG | - | chr4_4:62371306-62371325 | Msa0693470:CDS | 30.0% | |
| TATGATTCCAATCTCATTCT+AGG | + | chr4_4:62371316-62371335 | None:intergenic | 30.0% | |
| TTGTAAGTCATACTTTCATC+AGG | + | chr4_4:62371409-62371428 | None:intergenic | 30.0% | |
| ! | GAAAGTATGACTTACAATGT+TGG | - | chr4_4:62371412-62371431 | Msa0693470:intron | 30.0% |
| GTAAGAGAAATTGAAGTAGA+AGG | + | chr4_4:62371466-62371485 | None:intergenic | 30.0% | |
| !!! | TTTTTTTACCTTTGTCCTAG+TGG | + | chr4_4:62371497-62371516 | None:intergenic | 30.0% |
| CATGAAAAAACAGAACAAAC+AGG | + | chr4_4:62370358-62370377 | None:intergenic | 30.0% | |
| GATTATGCAATTACAGATAC+TGG | - | chr4_4:62370437-62370456 | Msa0693470:CDS | 30.0% | |
| ! | CTTGTTGTGGATCATTTAAT+TGG | + | chr4_4:62370664-62370683 | None:intergenic | 30.0% |
| TGGAAGATATGGTTTGATAT+TGG | + | chr4_4:62370705-62370724 | None:intergenic | 30.0% | |
| CTGGAACAAGATATTGAATT+AGG | + | chr4_4:62370787-62370806 | None:intergenic | 30.0% | |
| ! | TACAATGCTCTAGTTCAATT+AGG | - | chr4_4:62370821-62370840 | Msa0693470:CDS | 30.0% |
| TCAAGAACTTCTAATGAACT+AGG | + | chr4_4:62370875-62370894 | None:intergenic | 30.0% | |
| ! | CAAAAACAAAATCACCCTTT+TGG | - | chr4_4:62370972-62370991 | Msa0693470:CDS | 30.0% |
| ATTTAATCCTAACCAAGGAA+TGG | - | chr4_4:62371060-62371079 | Msa0693470:CDS | 30.0% | |
| TGATAACATGCTTTATGCTA+TGG | - | chr4_4:62371108-62371127 | Msa0693470:CDS | 30.0% | |
| ACATTTGCCATTGCTAAATT+AGG | - | chr4_4:62371142-62371161 | Msa0693470:CDS | 30.0% | |
| !! | ATTAGGTTTTAATGGGATAG+AGG | - | chr4_4:62371159-62371178 | Msa0693470:CDS | 30.0% |
| ! | TTTTAATGGGATAGAGGTTA+GGG | - | chr4_4:62371165-62371184 | Msa0693470:CDS | 30.0% |
| !! | AATCTCATTCTAGGATTCAA+AGG | + | chr4_4:62371307-62371326 | None:intergenic | 30.0% |
| TTTGAATCCTAGAATGAGAT+TGG | - | chr4_4:62371306-62371325 | Msa0693470:CDS | 30.0% | |
| TATGATTCCAATCTCATTCT+AGG | + | chr4_4:62371316-62371335 | None:intergenic | 30.0% | |
| TTGTAAGTCATACTTTCATC+AGG | + | chr4_4:62371409-62371428 | None:intergenic | 30.0% | |
| ! | GAAAGTATGACTTACAATGT+TGG | - | chr4_4:62371412-62371431 | Msa0693470:intron | 30.0% |
| GTAAGAGAAATTGAAGTAGA+AGG | + | chr4_4:62371466-62371485 | None:intergenic | 30.0% | |
| !!! | TTTTTTTACCTTTGTCCTAG+TGG | + | chr4_4:62371497-62371516 | None:intergenic | 30.0% |
| GGCAACATTTACTCAAAGAA+TGG | - | chr4_4:62370289-62370308 | Msa0693470:CDS | 35.0% | |
| !!! | AGAAGTCCTAGTACTTTTTC+TGG | + | chr4_4:62370527-62370546 | None:intergenic | 35.0% |
| GATAATTTCCACGTCTGAAT+TGG | + | chr4_4:62370615-62370634 | None:intergenic | 35.0% | |
| ATCTTTGTGTCTGGAAGATA+TGG | + | chr4_4:62370716-62370735 | None:intergenic | 35.0% | |
| AAGATCACTGGAATTCAAGT+AGG | - | chr4_4:62370731-62370750 | Msa0693470:CDS | 35.0% | |
| AGATCACTGGAATTCAAGTA+GGG | - | chr4_4:62370732-62370751 | Msa0693470:CDS | 35.0% | |
| TTGTAAATGTTGATCACTGC+TGG | + | chr4_4:62370806-62370825 | None:intergenic | 35.0% | |
| ! | TGCTCTAGTTCAATTAGGTT+TGG | - | chr4_4:62370826-62370845 | Msa0693470:CDS | 35.0% |
| AGTTTCAGAAGTGAAATCTC+TGG | - | chr4_4:62370920-62370939 | Msa0693470:CDS | 35.0% | |
| TATTAGGATCAACCATTCCT+TGG | + | chr4_4:62371075-62371094 | None:intergenic | 35.0% | |
| !! | GTTTTAATGGGATAGAGGTT+AGG | - | chr4_4:62371164-62371183 | Msa0693470:CDS | 35.0% |
| AAAGGTGACTCTGATGAAAT+TGG | - | chr4_4:62371211-62371230 | Msa0693470:CDS | 35.0% | |
| AGGAGACAAATGAAGAATGA+AGG | - | chr4_4:62371277-62371296 | Msa0693470:CDS | 35.0% | |
| GGCAACATTTACTCAAAGAA+TGG | - | chr4_4:62370289-62370308 | Msa0693470:CDS | 35.0% | |
| !!! | AGAAGTCCTAGTACTTTTTC+TGG | + | chr4_4:62370527-62370546 | None:intergenic | 35.0% |
| GATAATTTCCACGTCTGAAT+TGG | + | chr4_4:62370615-62370634 | None:intergenic | 35.0% | |
| ATCTTTGTGTCTGGAAGATA+TGG | + | chr4_4:62370716-62370735 | None:intergenic | 35.0% | |
| AAGATCACTGGAATTCAAGT+AGG | - | chr4_4:62370731-62370750 | Msa0693470:CDS | 35.0% | |
| AGATCACTGGAATTCAAGTA+GGG | - | chr4_4:62370732-62370751 | Msa0693470:CDS | 35.0% | |
| TTGTAAATGTTGATCACTGC+TGG | + | chr4_4:62370806-62370825 | None:intergenic | 35.0% | |
| ! | TGCTCTAGTTCAATTAGGTT+TGG | - | chr4_4:62370826-62370845 | Msa0693470:CDS | 35.0% |
| AGTTTCAGAAGTGAAATCTC+TGG | - | chr4_4:62370920-62370939 | Msa0693470:CDS | 35.0% | |
| TATTAGGATCAACCATTCCT+TGG | + | chr4_4:62371075-62371094 | None:intergenic | 35.0% | |
| !! | GTTTTAATGGGATAGAGGTT+AGG | - | chr4_4:62371164-62371183 | Msa0693470:CDS | 35.0% |
| AAAGGTGACTCTGATGAAAT+TGG | - | chr4_4:62371211-62371230 | Msa0693470:CDS | 35.0% | |
| AGGAGACAAATGAAGAATGA+AGG | - | chr4_4:62371277-62371296 | Msa0693470:CDS | 35.0% | |
| !!! | CTAGCATTTTTTCTCTCTGC+AGG | - | chr4_4:62370329-62370348 | Msa0693470:CDS | 40.0% |
| ! | GCGTCATTTGGAATCAACTA+TGG | - | chr4_4:62370476-62370495 | Msa0693470:CDS | 40.0% |
| !!! | CCTAGTACTTTTTCTGGTTG+TGG | + | chr4_4:62370521-62370540 | None:intergenic | 40.0% |
| !! | CCACAACCAGAAAAAGTACT+AGG | - | chr4_4:62370518-62370537 | Msa0693470:CDS | 40.0% |
| !! | GCGAAAGCTTTAAGAATCTG+TGG | + | chr4_4:62370593-62370612 | None:intergenic | 40.0% |
| ATCCACAACAAGCACTTCAA+TGG | - | chr4_4:62370672-62370691 | Msa0693470:CDS | 40.0% | |
| TCCACAACAAGCACTTCAAT+GGG | - | chr4_4:62370673-62370692 | Msa0693470:CDS | 40.0% | |
| ATTCCAGTGATCTTTGTGTC+TGG | + | chr4_4:62370725-62370744 | None:intergenic | 40.0% | |
| ! | GGATATGCATTGACCCAAAA+GGG | + | chr4_4:62370989-62371008 | None:intergenic | 40.0% |
| ! | AGGATATGCATTGACCCAAA+AGG | + | chr4_4:62370990-62371009 | None:intergenic | 40.0% |
| ! | TCATCAGAGTCACCTTTTGA+TGG | + | chr4_4:62371208-62371227 | None:intergenic | 40.0% |
| CAAACCATAGTTCCTTTCTG+AGG | + | chr4_4:62371380-62371399 | None:intergenic | 40.0% | |
| !!! | CTAGCATTTTTTCTCTCTGC+AGG | - | chr4_4:62370329-62370348 | Msa0693470:CDS | 40.0% |
| ! | GCGTCATTTGGAATCAACTA+TGG | - | chr4_4:62370476-62370495 | Msa0693470:CDS | 40.0% |
| !!! | CCTAGTACTTTTTCTGGTTG+TGG | + | chr4_4:62370521-62370540 | None:intergenic | 40.0% |
| !! | CCACAACCAGAAAAAGTACT+AGG | - | chr4_4:62370518-62370537 | Msa0693470:CDS | 40.0% |
| !! | GCGAAAGCTTTAAGAATCTG+TGG | + | chr4_4:62370593-62370612 | None:intergenic | 40.0% |
| ATCCACAACAAGCACTTCAA+TGG | - | chr4_4:62370672-62370691 | Msa0693470:CDS | 40.0% | |
| TCCACAACAAGCACTTCAAT+GGG | - | chr4_4:62370673-62370692 | Msa0693470:CDS | 40.0% | |
| ATTCCAGTGATCTTTGTGTC+TGG | + | chr4_4:62370725-62370744 | None:intergenic | 40.0% | |
| ! | GGATATGCATTGACCCAAAA+GGG | + | chr4_4:62370989-62371008 | None:intergenic | 40.0% |
| ! | AGGATATGCATTGACCCAAA+AGG | + | chr4_4:62370990-62371009 | None:intergenic | 40.0% |
| ! | TCATCAGAGTCACCTTTTGA+TGG | + | chr4_4:62371208-62371227 | None:intergenic | 40.0% |
| CAAACCATAGTTCCTTTCTG+AGG | + | chr4_4:62371380-62371399 | None:intergenic | 40.0% | |
| ! | ACCCATTGAAGTGCTTGTTG+TGG | + | chr4_4:62370677-62370696 | None:intergenic | 45.0% |
| CTTCCAGACACAAAGATCAC+TGG | - | chr4_4:62370719-62370738 | Msa0693470:CDS | 45.0% | |
| TGAAACTACCAGCTGAAGGA+GGG | + | chr4_4:62370907-62370926 | None:intergenic | 45.0% | |
| !! | CTTCTGAAACTACCAGCTGA+AGG | + | chr4_4:62370911-62370930 | None:intergenic | 45.0% |
| GGATCAACCATTCCTTGGTT+AGG | + | chr4_4:62371070-62371089 | None:intergenic | 45.0% | |
| !! | TTAGGGTTTCTGAGACTGGT+TGG | - | chr4_4:62371182-62371201 | Msa0693470:CDS | 45.0% |
| AGAATGGACCAACCTCAGAA+AGG | - | chr4_4:62371365-62371384 | Msa0693470:intron | 45.0% | |
| !! | CCATAGTTCCTTTCTGAGGT+TGG | + | chr4_4:62371376-62371395 | None:intergenic | 45.0% |
| CCAACCTCAGAAAGGAACTA+TGG | - | chr4_4:62371373-62371392 | Msa0693470:intron | 45.0% | |
| ! | ACCCATTGAAGTGCTTGTTG+TGG | + | chr4_4:62370677-62370696 | None:intergenic | 45.0% |
| CTTCCAGACACAAAGATCAC+TGG | - | chr4_4:62370719-62370738 | Msa0693470:CDS | 45.0% | |
| TGAAACTACCAGCTGAAGGA+GGG | + | chr4_4:62370907-62370926 | None:intergenic | 45.0% | |
| !! | CTTCTGAAACTACCAGCTGA+AGG | + | chr4_4:62370911-62370930 | None:intergenic | 45.0% |
| GGATCAACCATTCCTTGGTT+AGG | + | chr4_4:62371070-62371089 | None:intergenic | 45.0% | |
| !! | TTAGGGTTTCTGAGACTGGT+TGG | - | chr4_4:62371182-62371201 | Msa0693470:CDS | 45.0% |
| AGAATGGACCAACCTCAGAA+AGG | - | chr4_4:62371365-62371384 | Msa0693470:intron | 45.0% | |
| !! | CCATAGTTCCTTTCTGAGGT+TGG | + | chr4_4:62371376-62371395 | None:intergenic | 45.0% |
| CCAACCTCAGAAAGGAACTA+TGG | - | chr4_4:62371373-62371392 | Msa0693470:intron | 45.0% | |
| AGCTTTCGCCAATTCAGACG+TGG | - | chr4_4:62370604-62370623 | Msa0693470:CDS | 50.0% | |
| GAATCTTACCCTCCTTCAGC+TGG | - | chr4_4:62370896-62370915 | Msa0693470:CDS | 50.0% | |
| CTGAAACTACCAGCTGAAGG+AGG | + | chr4_4:62370908-62370927 | None:intergenic | 50.0% | |
| !! | GAGGTTAGGGTTTCTGAGAC+TGG | - | chr4_4:62371178-62371197 | Msa0693470:CDS | 50.0% |
| ! | GAGACTGGTTGGCCATCAAA+AGG | - | chr4_4:62371193-62371212 | Msa0693470:CDS | 50.0% |
| CTCTTACCTCTTCTGCCACT+AGG | - | chr4_4:62371479-62371498 | Msa0693470:CDS | 50.0% | |
| CTTTGTCCTAGTGGCAGAAG+AGG | + | chr4_4:62371488-62371507 | None:intergenic | 50.0% | |
| CTCTTCTGCCACTAGGACAA+AGG | - | chr4_4:62371486-62371505 | Msa0693470:CDS | 50.0% | |
| AGCTTTCGCCAATTCAGACG+TGG | - | chr4_4:62370604-62370623 | Msa0693470:CDS | 50.0% | |
| GAATCTTACCCTCCTTCAGC+TGG | - | chr4_4:62370896-62370915 | Msa0693470:CDS | 50.0% | |
| CTGAAACTACCAGCTGAAGG+AGG | + | chr4_4:62370908-62370927 | None:intergenic | 50.0% | |
| !! | GAGGTTAGGGTTTCTGAGAC+TGG | - | chr4_4:62371178-62371197 | Msa0693470:CDS | 50.0% |
| ! | GAGACTGGTTGGCCATCAAA+AGG | - | chr4_4:62371193-62371212 | Msa0693470:CDS | 50.0% |
| CTCTTACCTCTTCTGCCACT+AGG | - | chr4_4:62371479-62371498 | Msa0693470:CDS | 50.0% | |
| CTTTGTCCTAGTGGCAGAAG+AGG | + | chr4_4:62371488-62371507 | None:intergenic | 50.0% | |
| CTCTTCTGCCACTAGGACAA+AGG | - | chr4_4:62371486-62371505 | Msa0693470:CDS | 50.0% | |
| TTCGCACGTGTCGCGTCATT+TGG | - | chr4_4:62370464-62370483 | Msa0693470:CDS | 55.0% | |
| TTCGCACGTGTCGCGTCATT+TGG | - | chr4_4:62370464-62370483 | Msa0693470:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 62370233 | 62371579 | 62370233 | ID=Msa0693470;Name=Msa0693470 |
| chr4_4 | mRNA | 62370233 | 62371579 | 62370233 | ID=Msa0693470-mRNA-1;Parent=Msa0693470;Name=Msa0693470-mRNA-1;_AED=0.08;_eAED=0.08;_QI=54|1|0.5|1|1|1|2|0|396 |
| chr4_4 | exon | 62370233 | 62371359 | 62370233 | ID=Msa0693470-mRNA-1:exon:17451;Parent=Msa0693470-mRNA-1 |
| chr4_4 | exon | 62371462 | 62371579 | 62371462 | ID=Msa0693470-mRNA-1:exon:17450;Parent=Msa0693470-mRNA-1 |
| chr4_4 | five_prime_UTR | 62371526 | 62371579 | 62371526 | ID=Msa0693470-mRNA-1:five_prime_utr;Parent=Msa0693470-mRNA-1 |
| chr4_4 | CDS | 62371462 | 62371525 | 62371462 | ID=Msa0693470-mRNA-1:cds;Parent=Msa0693470-mRNA-1 |
| chr4_4 | CDS | 62370233 | 62371359 | 62370233 | ID=Msa0693470-mRNA-1:cds;Parent=Msa0693470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
