Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0574630 | XP_013447352.2 | 93.911 | 542 | 31 | 2 | 1 | 541 | 1 | 541 | 0.0 | 1043 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0574630 | sp|O49298|PME6_ARATH | 52.424 | 557 | 226 | 13 | 11 | 541 | 11 | 554 | 0.0 | 549 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0574630 | A0A396GY45 | 93.911 | 542 | 31 | 2 | 1 | 541 | 1 | 541 | 0.0 | 1043 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0201370 | Msa0574630 | 0.817437 | 3.298751e-52 | -8.615850e-47 |
Msa0282590 | Msa0574630 | 0.803664 | 3.128911e-49 | -8.615850e-47 |
Msa0574620 | Msa0574630 | 0.907193 | 6.603761e-81 | -8.615850e-47 |
Msa0574630 | Msa0708330 | 0.877795 | 4.715803e-69 | -8.615850e-47 |
Msa0574630 | Msa0708350 | 0.868253 | 7.490032e-66 | -8.615850e-47 |
Msa0574630 | Msa1111760 | 0.805257 | 1.456351e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0574630 | MtrunA17_Chr8g0391311 | 93.911 | 542 | 31 | 2 | 1 | 541 | 1 | 541 | 0.0 | 1043 |
Msa0574630 | MtrunA17_Chr8g0391291 | 93.358 | 542 | 32 | 3 | 1 | 541 | 1 | 539 | 0.0 | 1032 |
Msa0574630 | MtrunA17_Chr8g0391281 | 91.667 | 312 | 22 | 3 | 1 | 311 | 1 | 309 | 0.0 | 559 |
Msa0574630 | MtrunA17_Chr4g0011771 | 50.466 | 537 | 229 | 11 | 13 | 541 | 6 | 513 | 0.0 | 529 |
Msa0574630 | MtrunA17_Chr4g0011791 | 49.813 | 534 | 227 | 13 | 18 | 541 | 7 | 509 | 4.89e-178 | 511 |
Msa0574630 | MtrunA17_Chr3g0079341 | 47.082 | 514 | 242 | 7 | 36 | 541 | 36 | 527 | 1.55e-161 | 470 |
Msa0574630 | MtrunA17_Chr4g0018371 | 45.136 | 514 | 260 | 6 | 36 | 541 | 40 | 539 | 1.31e-160 | 468 |
Msa0574630 | MtrunA17_Chr3g0090091 | 47.104 | 518 | 237 | 10 | 36 | 541 | 36 | 528 | 3.21e-160 | 466 |
Msa0574630 | MtrunA17_Chr3g0079361 | 46.693 | 514 | 244 | 6 | 36 | 541 | 36 | 527 | 1.07e-159 | 465 |
Msa0574630 | MtrunA17_Chr3g0079351 | 46.887 | 514 | 243 | 8 | 36 | 541 | 36 | 527 | 4.96e-159 | 463 |
Msa0574630 | MtrunA17_Chr4g0011751 | 49.684 | 475 | 205 | 8 | 74 | 541 | 42 | 489 | 9.61e-157 | 456 |
Msa0574630 | MtrunA17_Chr7g0269541 | 45.946 | 518 | 252 | 7 | 35 | 537 | 48 | 552 | 8.23e-155 | 454 |
Msa0574630 | MtrunA17_Chr7g0233771 | 45.920 | 527 | 244 | 11 | 37 | 541 | 47 | 554 | 7.11e-153 | 449 |
Msa0574630 | MtrunA17_Chr8g0345281 | 44.571 | 525 | 267 | 6 | 35 | 541 | 71 | 589 | 7.46e-150 | 442 |
Msa0574630 | MtrunA17_Chr2g0302021 | 47.269 | 476 | 217 | 7 | 79 | 541 | 71 | 525 | 5.63e-142 | 420 |
Msa0574630 | MtrunA17_Chr3g0126771 | 42.617 | 535 | 261 | 11 | 35 | 541 | 81 | 597 | 2.54e-141 | 421 |
Msa0574630 | MtrunA17_Chr1g0147051 | 42.509 | 534 | 269 | 10 | 35 | 541 | 85 | 607 | 3.13e-141 | 421 |
Msa0574630 | MtrunA17_Chr7g0233801 | 43.570 | 521 | 254 | 10 | 42 | 541 | 52 | 553 | 4.05e-141 | 419 |
Msa0574630 | MtrunA17_Chr8g0354901 | 50.107 | 467 | 200 | 9 | 88 | 541 | 135 | 581 | 8.99e-141 | 419 |
Msa0574630 | MtrunA17_Chr1g0192331 | 45.698 | 523 | 243 | 14 | 35 | 541 | 31 | 528 | 7.80e-139 | 412 |
Msa0574630 | MtrunA17_Chr7g0233831 | 46.405 | 459 | 225 | 6 | 88 | 541 | 113 | 555 | 9.54e-139 | 412 |
Msa0574630 | MtrunA17_Chr7g0269531 | 44.673 | 535 | 253 | 11 | 33 | 537 | 40 | 561 | 1.18e-138 | 413 |
Msa0574630 | MtrunA17_Chr4g0069841 | 45.929 | 479 | 214 | 8 | 81 | 541 | 65 | 516 | 2.30e-137 | 408 |
Msa0574630 | MtrunA17_Chr7g0272141 | 45.051 | 495 | 234 | 10 | 63 | 541 | 70 | 542 | 9.60e-137 | 407 |
Msa0574630 | MtrunA17_Chr7g0269511 | 43.126 | 531 | 271 | 8 | 35 | 541 | 41 | 564 | 1.56e-134 | 402 |
Msa0574630 | MtrunA17_Chr7g0269521 | 50.698 | 430 | 190 | 8 | 129 | 541 | 138 | 562 | 3.20e-134 | 401 |
Msa0574630 | MtrunA17_Chr4g0069891 | 42.344 | 529 | 268 | 10 | 33 | 541 | 82 | 593 | 4.68e-133 | 399 |
Msa0574630 | MtrunA17_Chr3g0080391 | 46.753 | 462 | 215 | 8 | 92 | 541 | 132 | 574 | 8.21e-133 | 398 |
Msa0574630 | MtrunA17_Chr1g0195331 | 43.011 | 558 | 274 | 12 | 18 | 541 | 8 | 555 | 7.36e-132 | 395 |
Msa0574630 | MtrunA17_Chr1g0195301 | 42.652 | 558 | 276 | 12 | 18 | 541 | 8 | 555 | 2.75e-131 | 394 |
Msa0574630 | MtrunA17_Chr1g0195321 | 42.652 | 558 | 276 | 12 | 18 | 541 | 8 | 555 | 2.75e-131 | 394 |
Msa0574630 | MtrunA17_Chr4g0069881 | 42.418 | 521 | 256 | 13 | 36 | 541 | 44 | 535 | 1.45e-130 | 391 |
Msa0574630 | MtrunA17_Chr4g0069861 | 43.763 | 473 | 235 | 6 | 81 | 541 | 64 | 517 | 1.08e-129 | 388 |
Msa0574630 | MtrunA17_Chr8g0345211 | 43.238 | 525 | 256 | 13 | 36 | 541 | 81 | 582 | 1.54e-129 | 390 |
Msa0574630 | MtrunA17_Chr8g0354911 | 41.848 | 552 | 260 | 12 | 35 | 541 | 77 | 612 | 2.26e-129 | 390 |
Msa0574630 | MtrunA17_Chr1g0175661 | 42.935 | 552 | 276 | 12 | 21 | 541 | 15 | 558 | 8.17e-129 | 387 |
Msa0574630 | MtrunA17_Chr1g0195351 | 42.294 | 558 | 276 | 13 | 18 | 541 | 8 | 553 | 2.74e-126 | 380 |
Msa0574630 | MtrunA17_Chr1g0194091 | 40.516 | 543 | 288 | 12 | 27 | 541 | 34 | 569 | 1.78e-124 | 377 |
Msa0574630 | MtrunA17_Chr1g0194081 | 38.534 | 532 | 302 | 11 | 30 | 541 | 37 | 563 | 3.45e-120 | 365 |
Msa0574630 | MtrunA17_Chr1g0195311 | 61.597 | 263 | 100 | 1 | 279 | 541 | 53 | 314 | 5.65e-119 | 353 |
Msa0574630 | MtrunA17_Chr3g0080381 | 38.828 | 546 | 287 | 12 | 35 | 541 | 91 | 628 | 1.51e-117 | 360 |
Msa0574630 | MtrunA17_Chr1g0192311 | 39.306 | 519 | 284 | 14 | 36 | 537 | 62 | 566 | 2.15e-112 | 346 |
Msa0574630 | MtrunA17_Chr1g0192281 | 39.306 | 519 | 284 | 14 | 36 | 537 | 62 | 566 | 2.15e-112 | 346 |
Msa0574630 | MtrunA17_Chr1g0192321 | 37.753 | 543 | 280 | 14 | 36 | 540 | 60 | 582 | 2.36e-111 | 343 |
Msa0574630 | MtrunA17_Chr7g0272151 | 38.131 | 535 | 286 | 12 | 36 | 540 | 63 | 582 | 5.86e-111 | 342 |
Msa0574630 | MtrunA17_Chr1g0192301 | 38.104 | 517 | 293 | 12 | 36 | 537 | 67 | 571 | 8.35e-111 | 342 |
Msa0574630 | MtrunA17_Chr4g0067611 | 39.539 | 521 | 287 | 12 | 36 | 540 | 63 | 571 | 4.61e-110 | 340 |
Msa0574630 | MtrunA17_Chr4g0067601 | 39.163 | 526 | 288 | 12 | 33 | 540 | 60 | 571 | 7.94e-110 | 339 |
Msa0574630 | MtrunA17_Chr4g0000121 | 37.572 | 519 | 293 | 12 | 36 | 537 | 49 | 553 | 9.80e-110 | 338 |
Msa0574630 | MtrunA17_Chr7g0270661 | 39.715 | 491 | 263 | 9 | 75 | 536 | 83 | 569 | 2.41e-105 | 327 |
Msa0574630 | MtrunA17_Chr7g0270671 | 39.715 | 491 | 263 | 9 | 75 | 536 | 83 | 569 | 2.41e-105 | 327 |
Msa0574630 | MtrunA17_Chr2g0301931 | 54.225 | 284 | 125 | 3 | 258 | 541 | 14 | 292 | 9.15e-105 | 316 |
Msa0574630 | MtrunA17_Chr2g0295531 | 36.069 | 524 | 291 | 11 | 33 | 537 | 44 | 542 | 4.05e-103 | 323 |
Msa0574630 | MtrunA17_Chr7g0270651 | 36.431 | 538 | 307 | 10 | 33 | 541 | 43 | 574 | 4.97e-103 | 321 |
Msa0574630 | MtrunA17_Chr7g0234711 | 62.281 | 228 | 85 | 1 | 315 | 541 | 42 | 269 | 6.05e-103 | 310 |
Msa0574630 | MtrunA17_Chr7g0270691 | 35.057 | 522 | 299 | 9 | 36 | 541 | 52 | 549 | 8.16e-100 | 312 |
Msa0574630 | MtrunA17_Chr2g0302001 | 53.543 | 254 | 117 | 1 | 288 | 541 | 185 | 437 | 5.77e-99 | 306 |
Msa0574630 | MtrunA17_Chr2g0295551 | 36.295 | 529 | 294 | 11 | 33 | 540 | 57 | 563 | 1.61e-98 | 309 |
Msa0574630 | MtrunA17_Chr7g0270631 | 38.557 | 485 | 269 | 8 | 75 | 532 | 71 | 553 | 2.33e-94 | 311 |
Msa0574630 | MtrunA17_Chr7g0270631 | 37.917 | 480 | 266 | 9 | 75 | 524 | 619 | 1096 | 8.08e-84 | 282 |
Msa0574630 | MtrunA17_Chr8g0391261 | 92.806 | 139 | 10 | 0 | 403 | 541 | 28 | 166 | 9.94e-92 | 278 |
Msa0574630 | MtrunA17_Chr8g0384121 | 34.351 | 524 | 303 | 13 | 31 | 533 | 53 | 556 | 4.08e-90 | 288 |
Msa0574630 | MtrunA17_Chr3g0129921 | 35.065 | 539 | 283 | 16 | 33 | 534 | 49 | 557 | 8.70e-90 | 286 |
Msa0574630 | MtrunA17_Chr2g0295541 | 33.451 | 565 | 292 | 14 | 33 | 540 | 57 | 594 | 2.06e-89 | 286 |
Msa0574630 | MtrunA17_Chr5g0437831 | 41.813 | 342 | 192 | 6 | 202 | 541 | 47 | 383 | 1.35e-83 | 265 |
Msa0574630 | MtrunA17_Chr8g0380581 | 39.763 | 337 | 193 | 4 | 203 | 537 | 44 | 372 | 1.80e-83 | 264 |
Msa0574630 | MtrunA17_Chr7g0268241 | 40.256 | 313 | 174 | 5 | 230 | 541 | 50 | 350 | 2.36e-76 | 245 |
Msa0574630 | MtrunA17_Chr2g0334111 | 38.535 | 314 | 178 | 5 | 229 | 541 | 24 | 323 | 4.96e-75 | 240 |
Msa0574630 | MtrunA17_Chr7g0271381 | 31.716 | 536 | 293 | 17 | 36 | 541 | 64 | 556 | 4.15e-68 | 229 |
Msa0574630 | MtrunA17_Chr6g0487101 | 39.085 | 284 | 147 | 7 | 258 | 530 | 112 | 380 | 2.61e-50 | 177 |
Msa0574630 | MtrunA17_Chr8g0389771 | 38.811 | 286 | 147 | 7 | 258 | 530 | 107 | 377 | 1.85e-49 | 175 |
Msa0574630 | MtrunA17_Chr1g0194311 | 32.733 | 333 | 193 | 8 | 208 | 530 | 57 | 368 | 2.39e-49 | 174 |
Msa0574630 | MtrunA17_Chr2g0299431 | 43.265 | 245 | 124 | 6 | 203 | 442 | 30 | 264 | 7.52e-49 | 170 |
Msa0574630 | MtrunA17_Chr6g0453551 | 33.770 | 305 | 177 | 6 | 230 | 524 | 6 | 295 | 1.33e-48 | 171 |
Msa0574630 | MtrunA17_Chr7g0258341 | 34.421 | 337 | 194 | 7 | 209 | 531 | 65 | 388 | 4.21e-48 | 171 |
Msa0574630 | MtrunA17_Chr6g0466951 | 34.722 | 288 | 164 | 6 | 221 | 503 | 60 | 328 | 7.18e-48 | 170 |
Msa0574630 | MtrunA17_Chr7g0217941 | 32.099 | 324 | 189 | 7 | 232 | 539 | 8 | 316 | 7.82e-46 | 163 |
Msa0574630 | MtrunA17_Chr6g0466961 | 36.140 | 285 | 154 | 7 | 226 | 503 | 36 | 299 | 8.83e-46 | 163 |
Msa0574630 | MtrunA17_Chr7g0234731 | 34.043 | 282 | 157 | 6 | 36 | 310 | 55 | 314 | 9.82e-43 | 155 |
Msa0574630 | MtrunA17_Chr1g0161731 | 32.624 | 282 | 159 | 6 | 261 | 534 | 79 | 337 | 1.45e-42 | 155 |
Msa0574630 | MtrunA17_Chr5g0446301 | 32.899 | 307 | 178 | 7 | 236 | 530 | 67 | 357 | 4.95e-38 | 143 |
Msa0574630 | MtrunA17_Chr4g0070051 | 31.833 | 311 | 181 | 12 | 230 | 530 | 54 | 343 | 1.46e-37 | 142 |
Msa0574630 | MtrunA17_Chr5g0437821 | 46.970 | 132 | 69 | 1 | 344 | 474 | 4 | 135 | 1.97e-35 | 129 |
Msa0574630 | MtrunA17_Chr5g0440871 | 31.270 | 307 | 186 | 7 | 227 | 531 | 36 | 319 | 2.04e-35 | 135 |
Msa0574630 | MtrunA17_Chr7g0265201 | 29.412 | 306 | 188 | 6 | 232 | 530 | 101 | 385 | 5.86e-35 | 135 |
Msa0574630 | MtrunA17_Chr5g0399221 | 29.483 | 329 | 200 | 8 | 223 | 539 | 56 | 364 | 4.96e-34 | 132 |
Msa0574630 | MtrunA17_Chr2g0294321 | 29.231 | 325 | 204 | 7 | 212 | 530 | 42 | 346 | 5.24e-34 | 132 |
Msa0574630 | MtrunA17_Chr8g0351871 | 29.114 | 316 | 195 | 8 | 225 | 531 | 28 | 323 | 1.56e-31 | 124 |
Msa0574630 | MtrunA17_Chr4g0037751 | 29.964 | 277 | 175 | 6 | 230 | 500 | 71 | 334 | 3.10e-30 | 121 |
Msa0574630 | MtrunA17_Chr6g0459781 | 38.728 | 173 | 93 | 4 | 230 | 392 | 13 | 182 | 7.01e-30 | 116 |
Msa0574630 | MtrunA17_Chr2g0295851 | 28.221 | 326 | 197 | 10 | 212 | 530 | 41 | 336 | 8.38e-29 | 117 |
Msa0574630 | MtrunA17_Chr5g0420831 | 29.474 | 285 | 170 | 8 | 230 | 502 | 71 | 336 | 3.38e-28 | 115 |
Msa0574630 | MtrunA17_Chr4g0025841 | 29.388 | 245 | 155 | 5 | 230 | 474 | 37 | 263 | 1.50e-25 | 106 |
Msa0574630 | MtrunA17_Chr5g0440901 | 33.553 | 152 | 91 | 2 | 323 | 474 | 1 | 142 | 8.59e-23 | 94.7 |
Msa0574630 | MtrunA17_Chr7g0265161 | 30.387 | 181 | 93 | 4 | 296 | 471 | 5 | 157 | 1.00e-20 | 91.7 |
Msa0574630 | MtrunA17_Chr2g0314691 | 28.788 | 198 | 126 | 4 | 334 | 530 | 18 | 201 | 4.67e-20 | 88.6 |
Msa0574630 | MtrunA17_Chr6g0460141 | 37.681 | 138 | 78 | 5 | 261 | 390 | 7 | 144 | 9.44e-19 | 83.2 |
Msa0574630 | MtrunA17_Chr5g0440891 | 33.333 | 156 | 96 | 3 | 230 | 385 | 48 | 195 | 2.80e-17 | 80.5 |
Msa0574630 | MtrunA17_Chr4g0073911 | 27.273 | 176 | 118 | 3 | 261 | 429 | 38 | 210 | 6.78e-16 | 77.8 |
Msa0574630 | MtrunA17_Chr6g0459791 | 36.000 | 125 | 67 | 4 | 407 | 530 | 4 | 116 | 1.36e-14 | 70.5 |
Msa0574630 | MtrunA17_Chr4g0018251 | 28.916 | 166 | 102 | 5 | 27 | 181 | 35 | 195 | 5.92e-11 | 62.0 |
Msa0574630 | MtrunA17_Chr4g0018241 | 28.916 | 166 | 102 | 5 | 27 | 181 | 35 | 195 | 6.27e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0574630 | AT1G23200.1 | 52.424 | 557 | 226 | 13 | 11 | 541 | 11 | 554 | 0.0 | 549 |
Msa0574630 | AT2G45220.1 | 50.392 | 510 | 217 | 11 | 36 | 541 | 34 | 511 | 5.16e-174 | 501 |
Msa0574630 | AT5G51490.1 | 43.186 | 521 | 259 | 9 | 36 | 541 | 38 | 536 | 7.56e-148 | 436 |
Msa0574630 | AT3G49220.1 | 45.019 | 522 | 257 | 13 | 35 | 541 | 90 | 596 | 2.63e-147 | 436 |
Msa0574630 | AT5G51500.1 | 43.846 | 520 | 257 | 10 | 36 | 541 | 42 | 540 | 3.16e-147 | 434 |
Msa0574630 | AT3G49220.3 | 45.019 | 522 | 257 | 13 | 35 | 541 | 135 | 641 | 1.47e-146 | 436 |
Msa0574630 | AT3G60730.1 | 45.253 | 495 | 239 | 7 | 70 | 541 | 34 | 519 | 1.94e-146 | 431 |
Msa0574630 | AT3G47400.1 | 43.595 | 523 | 262 | 8 | 36 | 541 | 88 | 594 | 1.96e-146 | 434 |
Msa0574630 | AT3G14310.1 | 43.993 | 541 | 259 | 9 | 35 | 541 | 62 | 592 | 3.94e-145 | 431 |
Msa0574630 | AT5G53370.1 | 44.208 | 518 | 268 | 10 | 35 | 541 | 78 | 585 | 9.95e-145 | 429 |
Msa0574630 | AT5G53370.2 | 44.208 | 518 | 268 | 10 | 35 | 541 | 114 | 621 | 2.89e-144 | 429 |
Msa0574630 | AT1G11580.1 | 44.643 | 504 | 258 | 6 | 45 | 541 | 68 | 557 | 3.29e-143 | 424 |
Msa0574630 | AT1G11580.2 | 44.643 | 504 | 258 | 6 | 45 | 541 | 89 | 578 | 7.23e-143 | 424 |
Msa0574630 | AT1G53830.1 | 42.831 | 537 | 261 | 9 | 36 | 541 | 66 | 587 | 1.49e-139 | 416 |
Msa0574630 | AT3G59010.1 | 46.584 | 483 | 225 | 11 | 69 | 541 | 69 | 528 | 1.59e-137 | 409 |
Msa0574630 | AT3G43270.1 | 45.979 | 485 | 241 | 6 | 69 | 541 | 50 | 525 | 3.78e-135 | 403 |
Msa0574630 | AT4G00190.1 | 42.967 | 519 | 246 | 11 | 28 | 541 | 1 | 474 | 4.11e-134 | 398 |
Msa0574630 | AT2G26440.1 | 42.747 | 517 | 275 | 8 | 36 | 541 | 41 | 547 | 5.57e-134 | 400 |
Msa0574630 | AT4G02330.1 | 42.531 | 569 | 276 | 12 | 18 | 541 | 9 | 571 | 1.04e-133 | 400 |
Msa0574630 | AT4G02320.1 | 45.614 | 456 | 228 | 5 | 96 | 541 | 73 | 518 | 6.57e-132 | 394 |
Msa0574630 | AT2G26450.1 | 42.308 | 520 | 265 | 11 | 36 | 541 | 113 | 611 | 1.04e-131 | 397 |
Msa0574630 | AT5G27870.1 | 41.779 | 517 | 275 | 11 | 36 | 541 | 61 | 562 | 2.51e-131 | 400 |
Msa0574630 | AT3G05620.1 | 41.935 | 527 | 261 | 9 | 35 | 541 | 40 | 541 | 1.96e-130 | 391 |
Msa0574630 | AT2G43050.1 | 45.843 | 445 | 207 | 7 | 103 | 541 | 100 | 516 | 3.09e-130 | 390 |
Msa0574630 | AT4G02300.1 | 40.816 | 539 | 273 | 11 | 22 | 541 | 21 | 532 | 4.88e-130 | 390 |
Msa0574630 | AT4G33220.1 | 42.797 | 472 | 236 | 6 | 94 | 541 | 62 | 523 | 3.41e-129 | 387 |
Msa0574630 | AT5G04960.1 | 41.617 | 507 | 277 | 9 | 36 | 539 | 72 | 562 | 1.06e-128 | 387 |
Msa0574630 | AT3G05610.1 | 40.962 | 520 | 277 | 11 | 36 | 541 | 62 | 565 | 3.02e-128 | 390 |
Msa0574630 | AT3G10710.1 | 41.748 | 515 | 264 | 9 | 36 | 541 | 74 | 561 | 2.19e-125 | 379 |
Msa0574630 | AT1G02810.1 | 55.521 | 317 | 137 | 3 | 228 | 541 | 262 | 577 | 1.26e-123 | 375 |
Msa0574630 | AT3G10720.2 | 39.332 | 539 | 290 | 9 | 35 | 541 | 82 | 615 | 2.00e-123 | 375 |
Msa0574630 | AT5G04970.1 | 40.370 | 540 | 285 | 11 | 34 | 541 | 86 | 620 | 2.57e-123 | 375 |
Msa0574630 | AT4G33220.2 | 50.737 | 339 | 161 | 2 | 203 | 541 | 70 | 402 | 3.26e-123 | 368 |
Msa0574630 | AT2G47550.1 | 45.322 | 481 | 230 | 10 | 88 | 541 | 84 | 558 | 1.43e-122 | 372 |
Msa0574630 | AT4G33230.1 | 40.385 | 520 | 284 | 10 | 36 | 541 | 99 | 606 | 3.36e-122 | 372 |
Msa0574630 | AT5G49180.1 | 40.535 | 523 | 281 | 13 | 33 | 537 | 56 | 566 | 4.03e-122 | 371 |
Msa0574630 | AT3G06830.1 | 39.771 | 523 | 285 | 13 | 36 | 539 | 55 | 566 | 2.56e-121 | 369 |
Msa0574630 | AT5G20860.2 | 39.469 | 527 | 271 | 12 | 36 | 541 | 39 | 538 | 1.10e-120 | 366 |
Msa0574630 | AT1G53840.1 | 39.469 | 527 | 270 | 14 | 36 | 535 | 77 | 581 | 3.62e-120 | 366 |
Msa0574630 | AT3G14300.1 | 40.190 | 525 | 269 | 14 | 36 | 536 | 463 | 966 | 1.94e-114 | 362 |
Msa0574630 | AT3G10720.1 | 56.923 | 260 | 111 | 1 | 282 | 541 | 1 | 259 | 1.08e-108 | 325 |
Msa0574630 | AT4G03930.1 | 36.111 | 540 | 303 | 11 | 20 | 541 | 9 | 524 | 2.75e-106 | 328 |
Msa0574630 | AT3G27980.1 | 42.512 | 414 | 214 | 6 | 129 | 541 | 107 | 497 | 5.94e-104 | 322 |
Msa0574630 | AT1G11590.1 | 40.359 | 446 | 237 | 7 | 106 | 541 | 98 | 524 | 2.94e-103 | 320 |
Msa0574630 | AT4G15980.1 | 47.337 | 338 | 174 | 4 | 203 | 539 | 366 | 700 | 1.28e-101 | 322 |
Msa0574630 | AT4G15980.2 | 47.337 | 338 | 174 | 4 | 203 | 539 | 376 | 710 | 1.91e-101 | 322 |
Msa0574630 | AT5G20860.1 | 36.240 | 516 | 251 | 12 | 28 | 520 | 29 | 489 | 1.96e-99 | 310 |
Msa0574630 | AT5G09760.1 | 34.783 | 529 | 295 | 13 | 33 | 534 | 46 | 551 | 5.27e-92 | 292 |
Msa0574630 | AT5G09760.2 | 34.783 | 529 | 295 | 13 | 33 | 534 | 72 | 577 | 9.97e-92 | 292 |
Msa0574630 | AT1G11370.1 | 49.612 | 258 | 129 | 1 | 216 | 473 | 32 | 288 | 1.91e-87 | 271 |
Msa0574630 | AT3G62170.1 | 37.342 | 474 | 256 | 11 | 100 | 541 | 124 | 588 | 1.13e-86 | 279 |
Msa0574630 | AT2G47040.1 | 39.207 | 454 | 248 | 12 | 103 | 541 | 155 | 595 | 1.89e-86 | 279 |
Msa0574630 | AT2G47030.1 | 40.049 | 412 | 216 | 8 | 154 | 541 | 184 | 588 | 2.81e-86 | 278 |
Msa0574630 | AT5G64640.1 | 36.748 | 449 | 250 | 11 | 104 | 531 | 164 | 599 | 2.27e-84 | 274 |
Msa0574630 | AT5G19730.1 | 37.676 | 284 | 151 | 6 | 258 | 530 | 113 | 381 | 3.10e-50 | 177 |
Msa0574630 | AT3G29090.1 | 35.439 | 285 | 160 | 6 | 230 | 503 | 7 | 278 | 3.73e-48 | 170 |
Msa0574630 | AT1G05310.1 | 35.032 | 314 | 175 | 7 | 230 | 530 | 91 | 388 | 4.03e-47 | 169 |
Msa0574630 | AT2G36710.1 | 33.442 | 308 | 185 | 5 | 230 | 530 | 91 | 385 | 4.31e-44 | 161 |
Msa0574630 | AT2G36700.1 | 31.579 | 304 | 189 | 5 | 232 | 530 | 44 | 333 | 5.62e-44 | 159 |
Msa0574630 | AT1G44980.1 | 42.512 | 207 | 117 | 2 | 188 | 394 | 37 | 241 | 3.33e-42 | 152 |
Msa0574630 | AT3G17060.1 | 28.869 | 336 | 205 | 8 | 210 | 530 | 20 | 336 | 6.62e-40 | 148 |
Msa0574630 | AT2G21610.1 | 30.795 | 302 | 188 | 6 | 230 | 530 | 51 | 332 | 6.87e-40 | 148 |
Msa0574630 | AT2G21610.2 | 30.795 | 302 | 188 | 6 | 230 | 530 | 56 | 337 | 8.22e-40 | 148 |
Msa0574630 | AT3G24130.1 | 31.333 | 300 | 179 | 7 | 215 | 503 | 21 | 304 | 9.53e-39 | 145 |
Msa0574630 | AT5G18990.1 | 32.333 | 300 | 171 | 7 | 215 | 503 | 21 | 299 | 1.62e-37 | 141 |
Msa0574630 | AT5G47500.1 | 30.699 | 329 | 196 | 8 | 223 | 539 | 54 | 362 | 2.76e-37 | 141 |
Msa0574630 | AT5G07430.1 | 30.323 | 310 | 196 | 6 | 225 | 530 | 62 | 355 | 4.78e-37 | 141 |
Msa0574630 | AT5G55590.1 | 34.385 | 317 | 178 | 9 | 227 | 530 | 79 | 378 | 6.36e-36 | 138 |
Msa0574630 | AT5G26810.1 | 30.794 | 315 | 191 | 9 | 230 | 531 | 34 | 334 | 2.33e-34 | 133 |
Msa0574630 | AT5G55590.2 | 34.615 | 260 | 145 | 7 | 227 | 474 | 79 | 325 | 4.64e-34 | 132 |
Msa0574630 | AT5G61680.1 | 29.052 | 327 | 206 | 9 | 209 | 530 | 53 | 358 | 1.04e-32 | 129 |
Msa0574630 | AT3G49220.2 | 32.877 | 292 | 166 | 13 | 35 | 311 | 135 | 411 | 1.08e-32 | 130 |
Msa0574630 | AT2G19150.1 | 28.395 | 324 | 209 | 8 | 221 | 537 | 32 | 339 | 2.02e-32 | 127 |
Msa0574630 | AT5G07420.1 | 28.308 | 325 | 207 | 9 | 213 | 530 | 50 | 355 | 2.71e-31 | 125 |
Msa0574630 | AT2G47280.1 | 29.167 | 312 | 193 | 8 | 230 | 531 | 35 | 328 | 5.96e-30 | 120 |
Msa0574630 | AT2G19150.2 | 29.344 | 259 | 167 | 6 | 221 | 474 | 32 | 279 | 3.53e-28 | 114 |
Msa0574630 | AT1G69940.1 | 26.045 | 311 | 207 | 8 | 225 | 530 | 63 | 355 | 5.85e-27 | 112 |
Msa0574630 | AT5G07410.1 | 26.367 | 311 | 206 | 8 | 225 | 530 | 63 | 355 | 8.91e-27 | 112 |
Find 170 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGGTGATTCTTGGATTTC+AGG | 0.138272 | 4_1:-78243956 | Msa0574630:CDS |
AAATTTCCATATTGGCTTTC+AGG | 0.159767 | 4_1:-78246196 | Msa0574630:CDS |
GTGAAGAATTTAATGATATT+TGG | 0.168927 | 4_1:-78245971 | Msa0574630:CDS |
TTCTTCTTCTTTCCATGATA+TGG | 0.204942 | 4_1:-78246620 | Msa0574630:CDS |
AATAATTATTGCAGCTGTTA+TGG | 0.232312 | 4_1:-78244608 | Msa0574630:intron |
CGAAGCTTAGGATAGAATTA+AGG | 0.236652 | 4_1:+78247008 | None:intergenic |
GCCAAGTTAATTTATCATTT+AGG | 0.239565 | 4_1:+78246434 | None:intergenic |
TGTGAATATTGATTAATTTC+TGG | 0.257072 | 4_1:-78243907 | Msa0574630:exon |
AATTATCAAACTTGTCAAAA+TGG | 0.258596 | 4_1:-78246394 | Msa0574630:CDS |
GCATTGAGTACACTTTATTA+TGG | 0.267204 | 4_1:-78244094 | Msa0574630:CDS |
CTTACATTTCCTAAAGTTCT+TGG | 0.272581 | 4_1:+78247062 | None:intergenic |
ACAATCTTCCCATGCTGATT+TGG | 0.282004 | 4_1:+78246513 | None:intergenic |
TTTCCATGATATGGCTCTTA+AGG | 0.287787 | 4_1:-78246611 | Msa0574630:CDS |
AATCATTTGCTGCGGTTATA+CGG | 0.315468 | 4_1:+78244251 | None:intergenic |
TATCAGATAAATTTCCATAT+TGG | 0.318034 | 4_1:-78246204 | Msa0574630:CDS |
AATATGAGTTTATTCATATT+AGG | 0.319561 | 4_1:+78246784 | None:intergenic |
TCTGACCCTGAAAGCCAATA+TGG | 0.325074 | 4_1:+78246190 | None:intergenic |
CTGGTGATTCTTGGATTTCA+GGG | 0.333928 | 4_1:-78243955 | Msa0574630:CDS |
ATAATTATTGCAGCTGTTAT+GGG | 0.354501 | 4_1:-78244607 | Msa0574630:intron |
TATATATAGGTCAAGAGATT+TGG | 0.354700 | 4_1:+78246947 | None:intergenic |
TCATCAAGTACTAAACAAAA+TGG | 0.356786 | 4_1:-78246241 | Msa0574630:CDS |
ATGGACTCCACTATTGTTAC+TGG | 0.363587 | 4_1:-78245941 | Msa0574630:CDS |
ATAACACCACCAAGAACTTT+AGG | 0.367761 | 4_1:-78247071 | Msa0574630:five_prime_UTR |
AGATAGTGTGTTGGTGGTGG+TGG | 0.369196 | 4_1:+78246651 | None:intergenic |
CATGGAAAGAAGAAGAATCT+AGG | 0.371037 | 4_1:+78246626 | None:intergenic |
GGAACAATTGATTTCATCTT+CGG | 0.379639 | 4_1:-78244403 | Msa0574630:CDS |
GTCAGATAGAAAGCTGCTTC+AGG | 0.393140 | 4_1:-78246173 | Msa0574630:CDS |
AATTTCCATATTGGCTTTCA+GGG | 0.393369 | 4_1:-78246195 | Msa0574630:CDS |
AATTCAGTTAAAACATATCT+TGG | 0.398697 | 4_1:-78244214 | Msa0574630:CDS |
CTTCAGGCAACACCAGGGTC+AGG | 0.401448 | 4_1:-78246157 | Msa0574630:CDS |
TTTGATAAATTCAGAAGGTT+GGG | 0.405145 | 4_1:-78244137 | Msa0574630:CDS |
GGTAATCATAATGCTATAGA+TGG | 0.406520 | 4_1:-78245920 | Msa0574630:CDS |
GTTGTCATTCATGTGAAATC+AGG | 0.412213 | 4_1:-78246028 | Msa0574630:CDS |
ATACTGGTGGAAGAGTTAAT+TGG | 0.417090 | 4_1:-78244042 | Msa0574630:CDS |
TTGGCTTAGGTAGGCCATAC+AGG | 0.419438 | 4_1:+78246966 | None:intergenic |
GTAATGAAAAGTAATATTGA+TGG | 0.420796 | 4_1:-78244160 | Msa0574630:CDS |
TATTGTCATGTAGTATTTGT+TGG | 0.422147 | 4_1:-78243741 | Msa0574630:three_prime_UTR |
TTTGGAAGAGCTAGGTATAT+AGG | 0.422385 | 4_1:+78246857 | None:intergenic |
CGCAGCAAATGATTTGAAAC+CGG | 0.431620 | 4_1:-78244242 | Msa0574630:CDS |
TGTTCTTCCCTGTGCTGTTA+CGG | 0.432458 | 4_1:+78244312 | None:intergenic |
TACAAGTTTGTGTGCTTCAA+TGG | 0.434838 | 4_1:+78246573 | None:intergenic |
GTTGGTGGTGGTGCTAATAC+TGG | 0.437055 | 4_1:-78244058 | Msa0574630:CDS |
CTTGGTGCTGGCCCTGACCC+TGG | 0.440453 | 4_1:+78246145 | None:intergenic |
CAAGCAGTAGCTCTCCGTTC+CGG | 0.442034 | 4_1:-78244526 | Msa0574630:CDS |
GTTTGATAAATTCAGAAGGT+TGG | 0.445073 | 4_1:-78244138 | Msa0574630:CDS |
TTCTTGGTGGTGTTATTCGA+TGG | 0.446243 | 4_1:+78247078 | None:intergenic |
GAAGCTTAGGATAGAATTAA+GGG | 0.446292 | 4_1:+78247009 | None:intergenic |
ATTTGTGGGTGTCGAAGCTT+AGG | 0.446769 | 4_1:+78246996 | None:intergenic |
TTTGAAATTATTTAATTCCA+TGG | 0.450557 | 4_1:+78246546 | None:intergenic |
GGAAAGTAGTTTAAGTGAGA+TGG | 0.452219 | 4_1:+78246352 | None:intergenic |
GTGTTCTGTTGGTTGCTCAT+TGG | 0.453378 | 4_1:+78244334 | None:intergenic |
ACAAGTTTGATAATTGGTAA+TGG | 0.455118 | 4_1:+78246402 | None:intergenic |
TGGTTACACACATGAGGGTA+TGG | 0.456641 | 4_1:+78246685 | None:intergenic |
GGTGTCTTGGTAGCCTTTGA+AGG | 0.460911 | 4_1:+78244474 | None:intergenic |
GGAATAGTCATATTATCATA+TGG | 0.462423 | 4_1:+78247030 | None:intergenic |
ATTCAGAAGGTTGGGCTCCA+TGG | 0.464333 | 4_1:-78244129 | Msa0574630:CDS |
ATTGCAGCTGTTATGGGAGA+TGG | 0.472604 | 4_1:-78244601 | Msa0574630:intron |
ATTGTCATGTAGTATTTGTT+GGG | 0.472757 | 4_1:-78243740 | Msa0574630:three_prime_UTR |
GTGAAGTTGCTTAACATGGA+TGG | 0.473260 | 4_1:+78246331 | None:intergenic |
GGACATGACCTTTGAGAATA+CGG | 0.477411 | 4_1:-78244566 | Msa0574630:CDS |
AATGATATTTGGAGATGGAA+TGG | 0.477734 | 4_1:-78245960 | Msa0574630:CDS |
GTTGCAGCTGCTAAGCTTAG+TGG | 0.477922 | 4_1:-78246061 | Msa0574630:CDS |
GAAGGTTGGGCTCCATGGAT+GGG | 0.479662 | 4_1:-78244124 | Msa0574630:CDS |
GTTTGTGTGCTTCAATGGCT+TGG | 0.481327 | 4_1:+78246578 | None:intergenic |
AGAAGGTTGGGCTCCATGGA+TGG | 0.481727 | 4_1:-78244125 | Msa0574630:CDS |
AAGCTGCTTCAGGCAACACC+AGG | 0.481870 | 4_1:-78246163 | Msa0574630:CDS |
TGCAGTCGCGGTAGAATTGA+CGG | 0.487904 | 4_1:+78244434 | None:intergenic |
GGTAGATAGTGTGTTGGTGG+TGG | 0.488706 | 4_1:+78246648 | None:intergenic |
TTCTACCGTTGTGCCTTCAA+AGG | 0.490213 | 4_1:-78244487 | Msa0574630:CDS |
TAACCTTAAGAGCCATATCA+TGG | 0.497994 | 4_1:+78246608 | None:intergenic |
ACTTGAAATGATGATGACTT+TGG | 0.499085 | 4_1:-78243827 | Msa0574630:three_prime_UTR |
ACAGAACACCGTAACAGCAC+AGG | 0.500933 | 4_1:-78244320 | Msa0574630:CDS |
CATACAGGTATACTAATTTG+TGG | 0.503840 | 4_1:+78246981 | None:intergenic |
AGATTGTTTAGAGCTTTATG+AGG | 0.504717 | 4_1:-78246497 | Msa0574630:CDS |
AGTGGTGTGCCGTTTGATGC+AGG | 0.508356 | 4_1:-78243932 | Msa0574630:CDS |
ACCTAAATGATAAATTAACT+TGG | 0.508748 | 4_1:-78246435 | Msa0574630:CDS |
ACAATATCAGCTCTTGGTGC+TGG | 0.510769 | 4_1:+78246133 | None:intergenic |
TTGCAGCTGCTAAGCTTAGT+GGG | 0.511688 | 4_1:-78246060 | Msa0574630:CDS |
TCTTGGTGGTGTTATTCGAT+GGG | 0.513717 | 4_1:+78247079 | None:intergenic |
GATATTGTTGTTGCACAAGA+TGG | 0.515434 | 4_1:-78246118 | Msa0574630:CDS |
TGGTGGTGGTTCCAATGTAA+TGG | 0.517543 | 4_1:+78246665 | None:intergenic |
GTTCTTGAATATTTCTGCCA+TGG | 0.518439 | 4_1:+78244187 | None:intergenic |
GGTGGAAGAGTTAATTGGCC+TGG | 0.520232 | 4_1:-78244037 | Msa0574630:CDS |
AAAGGAATGGTGCTATATAT+AGG | 0.520351 | 4_1:+78246934 | None:intergenic |
ATGATTACCAGTAACAATAG+TGG | 0.522826 | 4_1:+78245934 | None:intergenic |
ATGGAAAGAAGAAGAATCTA+GGG | 0.522868 | 4_1:+78246627 | None:intergenic |
GGGAGATGGTTTCATAGCTA+AGG | 0.523196 | 4_1:-78244587 | Msa0574630:CDS |
GAAGGCACAACGGTAGAAAA+CGG | 0.523739 | 4_1:+78244492 | None:intergenic |
CACAAATTAGTATACCTGTA+TGG | 0.525557 | 4_1:-78246980 | Msa0574630:five_prime_UTR |
ATTCACAAACCTGCATCAAA+CGG | 0.526344 | 4_1:+78243923 | None:intergenic |
TGAATGAAATTTAAGTGCAA+AGG | 0.526777 | 4_1:+78246916 | None:intergenic |
TTTAGTGAAGTTGCTTAACA+TGG | 0.527598 | 4_1:+78246327 | None:intergenic |
TACCGCGACTGCAACATCTA+CGG | 0.528232 | 4_1:-78244424 | Msa0574630:CDS |
TATGGCTCTTAAGGTTACCT+TGG | 0.528919 | 4_1:-78246602 | Msa0574630:CDS |
CATAAGCATACAAGGTGTCT+TGG | 0.531685 | 4_1:+78244461 | None:intergenic |
TATAGTGAAAGAAATAAAAG+TGG | 0.536866 | 4_1:-78243869 | Msa0574630:three_prime_UTR |
TAGGTCAAGAGATTTGGCTT+AGG | 0.537662 | 4_1:+78246953 | None:intergenic |
TGTTATTACTAATCCTTCTG+AGG | 0.537907 | 4_1:-78244008 | Msa0574630:CDS |
GTGCTGTTACGGTGTTCTGT+TGG | 0.539536 | 4_1:+78244323 | None:intergenic |
GGTTGGGCTCCATGGATGGG+TGG | 0.540114 | 4_1:-78244121 | Msa0574630:CDS |
TGAAGTTAGAGTGTTGCTAA+TGG | 0.541067 | 4_1:+78246285 | None:intergenic |
ACATTTCCTAAAGTTCTTGG+TGG | 0.542116 | 4_1:+78247065 | None:intergenic |
TATGGTGAATATATGAATGT+TGG | 0.547151 | 4_1:-78244076 | Msa0574630:CDS |
GAAATTTAAGTGCAAAGGAA+TGG | 0.549780 | 4_1:+78246921 | None:intergenic |
TGGGTGTTTGCCTTGTACAA+AGG | 0.550451 | 4_1:-78243721 | Msa0574630:three_prime_UTR |
TCTTGTGTAACCTTTGTACA+AGG | 0.550590 | 4_1:+78243711 | None:intergenic |
GGTTACACACATGAGGGTAT+GGG | 0.553090 | 4_1:+78246686 | None:intergenic |
GAAAATTTAACAGCCTCAGA+AGG | 0.553132 | 4_1:+78243995 | None:intergenic |
ATCTAGGGTAGATAGTGTGT+TGG | 0.553314 | 4_1:+78246642 | None:intergenic |
AATTTAATGATATTTGGAGA+TGG | 0.553852 | 4_1:-78245965 | Msa0574630:CDS |
TTCCGTAGATGTTGCAGTCG+CGG | 0.554832 | 4_1:+78244422 | None:intergenic |
GCTGCTAAGCTTAGTGGGAA+AGG | 0.557812 | 4_1:-78246055 | Msa0574630:CDS |
GATTCTTGGATTTCAGGGAG+TGG | 0.559486 | 4_1:-78243950 | Msa0574630:CDS |
CGGAGTGATCGGCGCCGGAA+CGG | 0.559791 | 4_1:+78244512 | None:intergenic |
GCAACAACAATATCAGCTCT+TGG | 0.560130 | 4_1:+78246127 | None:intergenic |
AGTACTTGATGATGTGGATG+AGG | 0.565120 | 4_1:+78246252 | None:intergenic |
TTGTTTAGTACTTGATGATG+TGG | 0.565122 | 4_1:+78246246 | None:intergenic |
GTTGTTGCACAAGATGGAAG+TGG | 0.568022 | 4_1:-78246112 | Msa0574630:CDS |
AAAAGTGGTTGATGATTCAG+TGG | 0.568443 | 4_1:-78243854 | Msa0574630:three_prime_UTR |
ACGGTAGAAAACGGAGTGAT+CGG | 0.568769 | 4_1:+78244501 | None:intergenic |
CATGTGTGTAACCATTACAT+TGG | 0.569476 | 4_1:-78246676 | Msa0574630:CDS |
GGGTCCTGCCGTATTCTCAA+AGG | 0.569689 | 4_1:+78244558 | None:intergenic |
CAGAACACCGTAACAGCACA+GGG | 0.570741 | 4_1:-78244319 | Msa0574630:CDS |
GTTACACACATGAGGGTATG+GGG | 0.574452 | 4_1:+78246687 | None:intergenic |
TGCTTCAATGGCTTGGTCCA+AGG | 0.576746 | 4_1:+78246585 | None:intergenic |
TAGTCATATTATCATATGGA+AGG | 0.577962 | 4_1:+78247034 | None:intergenic |
ATACAGGTATACTAATTTGT+GGG | 0.578118 | 4_1:+78246982 | None:intergenic |
CGGAACGGAGAGCTACTGCT+TGG | 0.579824 | 4_1:+78244527 | None:intergenic |
GATGGTTTGATAAATTCAGA+AGG | 0.580230 | 4_1:-78244142 | Msa0574630:CDS |
TAAATATATTTGGAAGAGCT+AGG | 0.580761 | 4_1:+78246849 | None:intergenic |
AATGCAAAACCACCCATCCA+TGG | 0.580980 | 4_1:+78244112 | None:intergenic |
AAGAGCTAGGTATATAGGAA+TGG | 0.581001 | 4_1:+78246862 | None:intergenic |
TGCAACAACACCCTCTGAGA+TGG | 0.581283 | 4_1:+78246078 | None:intergenic |
GAAAACGGAGTGATCGGCGC+CGG | 0.581382 | 4_1:+78244507 | None:intergenic |
TAGGGTAGATAGTGTGTTGG+TGG | 0.585938 | 4_1:+78246645 | None:intergenic |
TCAAGTACTAAACAAAATGG+AGG | 0.588650 | 4_1:-78246238 | Msa0574630:CDS |
AAAAGAGGATGGTGAAAGCG+TGG | 0.591353 | 4_1:-78243789 | Msa0574630:three_prime_UTR |
GGTGAATATATGAATGTTGG+TGG | 0.591996 | 4_1:-78244073 | Msa0574630:CDS |
TGGTGGTGACAATTGAAGAT+GGG | 0.594007 | 4_1:-78243769 | Msa0574630:three_prime_UTR |
ACAAGCGTGCCAAATCAGCA+TGG | 0.597886 | 4_1:-78246522 | Msa0574630:CDS |
AGGATATGCAATATTGTGCA+TGG | 0.599200 | 4_1:+78246804 | None:intergenic |
AACTATAAGACCATCTCAGA+GGG | 0.599247 | 4_1:-78246088 | Msa0574630:CDS |
AGTAGTTTAAGTGAGATGGA+AGG | 0.599667 | 4_1:+78246356 | None:intergenic |
ATGACCTTTGAGAATACGGC+AGG | 0.599978 | 4_1:-78244562 | Msa0574630:CDS |
GTGGTGGTGACAATTGAAGA+TGG | 0.602928 | 4_1:-78243770 | Msa0574630:three_prime_UTR |
TTCAGGCAACACCAGGGTCA+GGG | 0.603563 | 4_1:-78246156 | Msa0574630:CDS |
CAAGCGTGCCAAATCAGCAT+GGG | 0.604901 | 4_1:-78246521 | Msa0574630:CDS |
ACGGTTGGCATAAGCATACA+AGG | 0.605300 | 4_1:+78244453 | None:intergenic |
ATGTAATGGTTACACACATG+AGG | 0.605826 | 4_1:+78246679 | None:intergenic |
TCAAGAGATTTGGCTTAGGT+AGG | 0.607745 | 4_1:+78246957 | None:intergenic |
GATGATGTGGATGAGGATGA+TGG | 0.609727 | 4_1:+78246259 | None:intergenic |
CTAAACAAAATGGAGGGAGA+AGG | 0.620123 | 4_1:-78246231 | Msa0574630:CDS |
GAATATATGAATGTTGGTGG+TGG | 0.621736 | 4_1:-78244070 | Msa0574630:CDS |
CGGTTTCAAATCATTTGCTG+CGG | 0.623680 | 4_1:+78244243 | None:intergenic |
GTCGCGGTAGAATTGACGGT+TGG | 0.627744 | 4_1:+78244438 | None:intergenic |
CAAGTACTAAACAAAATGGA+GGG | 0.628274 | 4_1:-78246237 | Msa0574630:CDS |
GGTATATAGGAATGGATGAG+TGG | 0.630123 | 4_1:+78246870 | None:intergenic |
TGTAATGGTTACACACATGA+GGG | 0.637885 | 4_1:+78246680 | None:intergenic |
ACAGATCCAAATGAAAACAC+AGG | 0.641536 | 4_1:-78244292 | Msa0574630:CDS |
AAACATATCTTGGTAGACCA+TGG | 0.646826 | 4_1:-78244204 | Msa0574630:CDS |
AAAGTGGTTGATGATTCAGT+GGG | 0.655206 | 4_1:-78243853 | Msa0574630:three_prime_UTR |
GGTGGTGGTGCTAATACTGG+TGG | 0.661832 | 4_1:-78244055 | Msa0574630:CDS |
ATGGCAGAAATATTCAAGAA+CGG | 0.671890 | 4_1:-78244185 | Msa0574630:CDS |
TTAGTAATAACATGAAAACC+AGG | 0.674041 | 4_1:+78244019 | None:intergenic |
ACACAAACTTGTATCAACCA+TGG | 0.676347 | 4_1:-78246563 | Msa0574630:CDS |
GGTGGTGACAATTGAAGATG+GGG | 0.677712 | 4_1:-78243768 | Msa0574630:three_prime_UTR |
GGTAGCCTTTGAAGGCACAA+CGG | 0.688392 | 4_1:+78244482 | None:intergenic |
AGCTGCTTCAGGCAACACCA+GGG | 0.695457 | 4_1:-78246162 | Msa0574630:CDS |
AAACTATAAGACCATCTCAG+AGG | 0.701800 | 4_1:-78246089 | Msa0574630:CDS |
AGAGGATGGTGAAAGCGTGG+TGG | 0.727927 | 4_1:-78243786 | Msa0574630:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGATAATTAAAGATATTAA+CGG | + | chr4_1:78245471-78245490 | None:intergenic | 10.0% |
!!! | TTTTAATGGCTAAATATATT+TGG | + | chr4_1:78243871-78243890 | None:intergenic | 15.0% |
!! | AATATGAGTTTATTCATATT+AGG | + | chr4_1:78243926-78243945 | None:intergenic | 15.0% |
!!! | TTTGAAATTATTTAATTCCA+TGG | + | chr4_1:78244164-78244183 | None:intergenic | 15.0% |
!! | AACAAATGTTAAATAAAGTA+GGG | + | chr4_1:78245236-78245255 | None:intergenic | 15.0% |
!! | AAACAAATGTTAAATAAAGT+AGG | + | chr4_1:78245237-78245256 | None:intergenic | 15.0% |
!! | TATACATTAGTTAAAAAGTA+TGG | - | chr4_1:78245575-78245594 | Msa0574630:intron | 15.0% |
!!! | TTGTTTTGTATAAAAAAAAG+AGG | - | chr4_1:78246903-78246922 | Msa0574630:five_prime_UTR | 15.0% |
!!! | TAGCGTTTTTTTTTTTTTTT+GGG | - | chr4_1:78247072-78247091 | Msa0574630:five_prime_UTR | 15.0% |
!!! | GGTATCGAATTTTTTTTTAA+TGG | + | chr4_1:78243885-78243904 | None:intergenic | 20.0% |
!! | ACCTAAATGATAAATTAACT+TGG | - | chr4_1:78244272-78244291 | Msa0574630:CDS | 20.0% |
!!! | ATTTTGACAAGTTTGATAAT+TGG | + | chr4_1:78244314-78244333 | None:intergenic | 20.0% |
!! | AATTATCAAACTTGTCAAAA+TGG | - | chr4_1:78244313-78244332 | Msa0574630:CDS | 20.0% |
!! | TATCAGATAAATTTCCATAT+TGG | - | chr4_1:78244503-78244522 | Msa0574630:CDS | 20.0% |
!! | GTGAAGAATTTAATGATATT+TGG | - | chr4_1:78244736-78244755 | Msa0574630:intron | 20.0% |
!! | AATTTAATGATATTTGGAGA+TGG | - | chr4_1:78244742-78244761 | Msa0574630:intron | 20.0% |
!! | TATGAATAGATTAGTGATTA+AGG | + | chr4_1:78244856-78244875 | None:intergenic | 20.0% |
!! | GATGTAAAAGATATAATTGT+TGG | + | chr4_1:78245698-78245717 | None:intergenic | 20.0% |
!!! | AACTTTTTACATTAATTGAC+CGG | + | chr4_1:78245882-78245901 | None:intergenic | 20.0% |
!! | GGTCATAATTACTTTATTAA+AGG | + | chr4_1:78245975-78245994 | None:intergenic | 20.0% |
!! | AATTCAGTTAAAACATATCT+TGG | - | chr4_1:78246493-78246512 | Msa0574630:CDS | 20.0% |
!! | GTAATGAAAAGTAATATTGA+TGG | - | chr4_1:78246547-78246566 | Msa0574630:CDS | 20.0% |
!!! | ATTTTCTGTTGGTAATTTTT+TGG | - | chr4_1:78246729-78246748 | Msa0574630:CDS | 20.0% |
!!! | TGTGAATATTGATTAATTTC+TGG | - | chr4_1:78246800-78246819 | Msa0574630:CDS | 20.0% |
!! | TATAGTGAAAGAAATAAAAG+TGG | - | chr4_1:78246838-78246857 | Msa0574630:five_prime_UTR | 20.0% |
!! | TTTGTATAAAAAAAAGAGGA+TGG | - | chr4_1:78246907-78246926 | Msa0574630:five_prime_UTR | 20.0% |
!!! | CTAGCGTTTTTTTTTTTTTT+TGG | - | chr4_1:78247071-78247090 | Msa0574630:five_prime_UTR | 20.0% |
!!! | TTTTTTTTTTTTTTGGGTCT+AGG | - | chr4_1:78247078-78247097 | Msa0574630:five_prime_UTR | 20.0% |
!!! | TTTTTTTTTTTTTGGGTCTA+GGG | - | chr4_1:78247079-78247098 | Msa0574630:five_prime_UTR | 20.0% |
!! | TAGTATTTTTCACGTAAACT+TGG | - | chr4_1:78243598-78243617 | Msa0574630:three_prime_UTR | 25.0% |
! | TAGTCATATTATCATATGGA+AGG | + | chr4_1:78243676-78243695 | None:intergenic | 25.0% |
! | GGAATAGTCATATTATCATA+TGG | + | chr4_1:78243680-78243699 | None:intergenic | 25.0% |
!! | ATACAGGTATACTAATTTGT+GGG | + | chr4_1:78243728-78243747 | None:intergenic | 25.0% |
! | TATATATAGGTCAAGAGATT+TGG | + | chr4_1:78243763-78243782 | None:intergenic | 25.0% |
! | TGAATGAAATTTAAGTGCAA+AGG | + | chr4_1:78243794-78243813 | None:intergenic | 25.0% |
! | TAAATATATTTGGAAGAGCT+AGG | + | chr4_1:78243861-78243880 | None:intergenic | 25.0% |
! | GCCAAGTTAATTTATCATTT+AGG | + | chr4_1:78244276-78244295 | None:intergenic | 25.0% |
!! | ACAAGTTTGATAATTGGTAA+TGG | + | chr4_1:78244308-78244327 | None:intergenic | 25.0% |
! | TCATCAAGTACTAAACAAAA+TGG | - | chr4_1:78244466-78244485 | Msa0574630:CDS | 25.0% |
! | CACTAGAAAATATATCACTT+TGG | - | chr4_1:78245017-78245036 | Msa0574630:intron | 25.0% |
! | TTTATGTACAACTTGTGTTA+AGG | - | chr4_1:78245070-78245089 | Msa0574630:intron | 25.0% |
!!! | ATTGGACATGTATTTTGAAA+CGG | - | chr4_1:78245634-78245653 | Msa0574630:intron | 25.0% |
! | CAGAACTTTAGTGAATATAA+AGG | + | chr4_1:78245841-78245860 | None:intergenic | 25.0% |
! | CTTTATATTCACTAAAGTTC+TGG | - | chr4_1:78245839-78245858 | Msa0574630:intron | 25.0% |
!!! | GTAAAGAATTTTTTGCACTT+TGG | + | chr4_1:78246033-78246052 | None:intergenic | 25.0% |
! | AATAATTATTGCAGCTGTTA+TGG | - | chr4_1:78246099-78246118 | Msa0574630:CDS | 25.0% |
! | ATAATTATTGCAGCTGTTAT+GGG | - | chr4_1:78246100-78246119 | Msa0574630:CDS | 25.0% |
! | TTTGATAAATTCAGAAGGTT+GGG | - | chr4_1:78246570-78246589 | Msa0574630:CDS | 25.0% |
! | TATGGTGAATATATGAATGT+TGG | - | chr4_1:78246631-78246650 | Msa0574630:CDS | 25.0% |
! | TTAGTAATAACATGAAAACC+AGG | + | chr4_1:78246691-78246710 | None:intergenic | 25.0% |
! | TATTGTCATGTAGTATTTGT+TGG | - | chr4_1:78246966-78246985 | Msa0574630:five_prime_UTR | 25.0% |
! | ATTGTCATGTAGTATTTGTT+GGG | - | chr4_1:78246967-78246986 | Msa0574630:five_prime_UTR | 25.0% |
!!! | TTTTTTTTTTTTGGGTCTAG+GGG | - | chr4_1:78247080-78247099 | Msa0574630:five_prime_UTR | 25.0% |
CTTACATTTCCTAAAGTTCT+TGG | + | chr4_1:78243648-78243667 | None:intergenic | 30.0% | |
GAAGCTTAGGATAGAATTAA+GGG | + | chr4_1:78243701-78243720 | None:intergenic | 30.0% | |
CATACAGGTATACTAATTTG+TGG | + | chr4_1:78243729-78243748 | None:intergenic | 30.0% | |
CACAAATTAGTATACCTGTA+TGG | - | chr4_1:78243727-78243746 | Msa0574630:three_prime_UTR | 30.0% | |
!! | AAAGGAATGGTGCTATATAT+AGG | + | chr4_1:78243776-78243795 | None:intergenic | 30.0% |
GAAATTTAAGTGCAAAGGAA+TGG | + | chr4_1:78243789-78243808 | None:intergenic | 30.0% | |
ATGGAAAGAAGAAGAATCTA+GGG | + | chr4_1:78244083-78244102 | None:intergenic | 30.0% | |
TTCTTCTTCTTTCCATGATA+TGG | - | chr4_1:78244087-78244106 | Msa0574630:CDS | 30.0% | |
! | AGATTGTTTAGAGCTTTATG+AGG | - | chr4_1:78244210-78244229 | Msa0574630:CDS | 30.0% |
TTTAGTGAAGTTGCTTAACA+TGG | + | chr4_1:78244383-78244402 | None:intergenic | 30.0% | |
!! | TTGTTTAGTACTTGATGATG+TGG | + | chr4_1:78244464-78244483 | None:intergenic | 30.0% |
TCAAGTACTAAACAAAATGG+AGG | - | chr4_1:78244469-78244488 | Msa0574630:CDS | 30.0% | |
CAAGTACTAAACAAAATGGA+GGG | - | chr4_1:78244470-78244489 | Msa0574630:CDS | 30.0% | |
!! | AAATTTCCATATTGGCTTTC+AGG | - | chr4_1:78244511-78244530 | Msa0574630:CDS | 30.0% |
!! | AATTTCCATATTGGCTTTCA+GGG | - | chr4_1:78244512-78244531 | Msa0574630:CDS | 30.0% |
AATGATATTTGGAGATGGAA+TGG | - | chr4_1:78244747-78244766 | Msa0574630:intron | 30.0% | |
ATGATTACCAGTAACAATAG+TGG | + | chr4_1:78244776-78244795 | None:intergenic | 30.0% | |
GGTAATCATAATGCTATAGA+TGG | - | chr4_1:78244787-78244806 | Msa0574630:intron | 30.0% | |
!! | ACAGTTGTTTTCTATATGCA+TGG | - | chr4_1:78244923-78244942 | Msa0574630:intron | 30.0% |
!! | CAGTTGTTTTCTATATGCAT+GGG | - | chr4_1:78244924-78244943 | Msa0574630:intron | 30.0% |
TTGAGTAACTACTTGTCATA+TGG | - | chr4_1:78245113-78245132 | Msa0574630:intron | 30.0% | |
! | CTTTTCTACTTTCTCACAAA+AGG | - | chr4_1:78245264-78245283 | Msa0574630:intron | 30.0% |
!! | CTTGGACATGTATTTTGAAA+CGG | + | chr4_1:78245413-78245432 | None:intergenic | 30.0% |
ATAGTGCACATTGCAAAAAT+TGG | - | chr4_1:78245616-78245635 | Msa0574630:intron | 30.0% | |
AGATATAATTGTTGGTCGTA+TGG | + | chr4_1:78245690-78245709 | None:intergenic | 30.0% | |
CCTGAACATTTAATAGTATG+TGG | + | chr4_1:78245996-78246015 | None:intergenic | 30.0% | |
CCACATACTATTAAATGTTC+AGG | - | chr4_1:78245993-78246012 | Msa0574630:CDS | 30.0% | |
! | GGAACAATTGATTTCATCTT+CGG | - | chr4_1:78246304-78246323 | Msa0574630:CDS | 30.0% |
! | ACAATTCCTGTGTTTTCATT+TGG | + | chr4_1:78246424-78246443 | None:intergenic | 30.0% |
!!! | GTTTTAACTGAATTCTGAAC+CGG | + | chr4_1:78246487-78246506 | None:intergenic | 30.0% |
ATGGCAGAAATATTCAAGAA+CGG | - | chr4_1:78246522-78246541 | Msa0574630:CDS | 30.0% | |
GATGGTTTGATAAATTCAGA+AGG | - | chr4_1:78246565-78246584 | Msa0574630:CDS | 30.0% | |
GTTTGATAAATTCAGAAGGT+TGG | - | chr4_1:78246569-78246588 | Msa0574630:CDS | 30.0% | |
GCATTGAGTACACTTTATTA+TGG | - | chr4_1:78246613-78246632 | Msa0574630:CDS | 30.0% | |
TGTTATTACTAATCCTTCTG+AGG | - | chr4_1:78246699-78246718 | Msa0574630:CDS | 30.0% | |
! | ACTTGAAATGATGATGACTT+TGG | - | chr4_1:78246880-78246899 | Msa0574630:five_prime_UTR | 30.0% |
ATAACACCACCAAGAACTTT+AGG | - | chr4_1:78243636-78243655 | Msa0574630:three_prime_UTR | 35.0% | |
ACATTTCCTAAAGTTCTTGG+TGG | + | chr4_1:78243645-78243664 | None:intergenic | 35.0% | |
CGAAGCTTAGGATAGAATTA+AGG | + | chr4_1:78243702-78243721 | None:intergenic | 35.0% | |
AAGAGCTAGGTATATAGGAA+TGG | + | chr4_1:78243848-78243867 | None:intergenic | 35.0% | |
TTTGGAAGAGCTAGGTATAT+AGG | + | chr4_1:78243853-78243872 | None:intergenic | 35.0% | |
AGGATATGCAATATTGTGCA+TGG | + | chr4_1:78243906-78243925 | None:intergenic | 35.0% | |
GCACAAACAAGAGAGAAAAA+AGG | + | chr4_1:78243973-78243992 | None:intergenic | 35.0% | |
!! | TTTTCTCTCTTGTTTGTGCA+TGG | - | chr4_1:78243974-78243993 | Msa0574630:CDS | 35.0% |
TGTAATGGTTACACACATGA+GGG | + | chr4_1:78244030-78244049 | None:intergenic | 35.0% | |
ATGTAATGGTTACACACATG+AGG | + | chr4_1:78244031-78244050 | None:intergenic | 35.0% | |
CATGTGTGTAACCATTACAT+TGG | - | chr4_1:78244031-78244050 | Msa0574630:CDS | 35.0% | |
CATGGAAAGAAGAAGAATCT+AGG | + | chr4_1:78244084-78244103 | None:intergenic | 35.0% | |
TTTCCATGATATGGCTCTTA+AGG | - | chr4_1:78244096-78244115 | Msa0574630:CDS | 35.0% | |
TAACCTTAAGAGCCATATCA+TGG | + | chr4_1:78244102-78244121 | None:intergenic | 35.0% | |
TACAAGTTTGTGTGCTTCAA+TGG | + | chr4_1:78244137-78244156 | None:intergenic | 35.0% | |
ACACAAACTTGTATCAACCA+TGG | - | chr4_1:78244144-78244163 | Msa0574630:CDS | 35.0% | |
AGTAGTTTAAGTGAGATGGA+AGG | + | chr4_1:78244354-78244373 | None:intergenic | 35.0% | |
GGAAAGTAGTTTAAGTGAGA+TGG | + | chr4_1:78244358-78244377 | None:intergenic | 35.0% | |
!! | TGAAGTTAGAGTGTTGCTAA+TGG | + | chr4_1:78244425-78244444 | None:intergenic | 35.0% |
! | GATATTGTTGTTGCACAAGA+TGG | - | chr4_1:78244589-78244608 | Msa0574630:CDS | 35.0% |
AAACTATAAGACCATCTCAG+AGG | - | chr4_1:78244618-78244637 | Msa0574630:intron | 35.0% | |
AACTATAAGACCATCTCAGA+GGG | - | chr4_1:78244619-78244638 | Msa0574630:intron | 35.0% | |
GTTGTCATTCATGTGAAATC+AGG | - | chr4_1:78244679-78244698 | Msa0574630:intron | 35.0% | |
!! | ACTTTTCGTTCAGCTACTTT+TGG | - | chr4_1:78244817-78244836 | Msa0574630:intron | 35.0% |
GGGAGAAATCATATGATCAA+TGG | - | chr4_1:78244944-78244963 | Msa0574630:intron | 35.0% | |
TGCATGTCTCTATCTTAATG+GGG | + | chr4_1:78245043-78245062 | None:intergenic | 35.0% | |
CTGCATGTCTCTATCTTAAT+GGG | + | chr4_1:78245044-78245063 | None:intergenic | 35.0% | |
ACTGCATGTCTCTATCTTAA+TGG | + | chr4_1:78245045-78245064 | None:intergenic | 35.0% | |
!!! | GACATGTATTTTGAAACGGA+GGG | + | chr4_1:78245638-78245657 | None:intergenic | 35.0% |
TAACGGTCAAAATTGTGCAT+TGG | + | chr4_1:78245454-78245473 | None:intergenic | 35.0% | |
!!! | GACATGTATTTTGAAACGGA+GGG | - | chr4_1:78245638-78245657 | Msa0574630:intron | 35.0% |
! | TACATTAATTGACCGGTTCA+TGG | + | chr4_1:78245875-78245894 | None:intergenic | 35.0% |
ACAGATCCAAATGAAAACAC+AGG | - | chr4_1:78246415-78246434 | Msa0574630:CDS | 35.0% | |
! | AATCATTTGCTGCGGTTATA+CGG | + | chr4_1:78246459-78246478 | None:intergenic | 35.0% |
AAACATATCTTGGTAGACCA+TGG | - | chr4_1:78246503-78246522 | Msa0574630:CDS | 35.0% | |
! | GTTCTTGAATATTTCTGCCA+TGG | + | chr4_1:78246523-78246542 | None:intergenic | 35.0% |
GGTGAATATATGAATGTTGG+TGG | - | chr4_1:78246634-78246653 | Msa0574630:CDS | 35.0% | |
! | GAATATATGAATGTTGGTGG+TGG | - | chr4_1:78246637-78246656 | Msa0574630:CDS | 35.0% |
ATACTGGTGGAAGAGTTAAT+TGG | - | chr4_1:78246665-78246684 | Msa0574630:CDS | 35.0% | |
GAAAATTTAACAGCCTCAGA+AGG | + | chr4_1:78246715-78246734 | None:intergenic | 35.0% | |
! | GAGGCTGTTAAATTTTCTGT+TGG | - | chr4_1:78246718-78246737 | Msa0574630:CDS | 35.0% |
!!! | TCTGTTGGTAATTTTTTGGC+TGG | - | chr4_1:78246733-78246752 | Msa0574630:CDS | 35.0% |
!!! | ATTTTTTGGCTGGTGATTCT+TGG | - | chr4_1:78246743-78246762 | Msa0574630:CDS | 35.0% |
ATTCACAAACCTGCATCAAA+CGG | + | chr4_1:78246787-78246806 | None:intergenic | 35.0% | |
!! | AAAAGTGGTTGATGATTCAG+TGG | - | chr4_1:78246853-78246872 | Msa0574630:five_prime_UTR | 35.0% |
!! | AAAGTGGTTGATGATTCAGT+GGG | - | chr4_1:78246854-78246873 | Msa0574630:five_prime_UTR | 35.0% |
TCTTGTGTAACCTTTGTACA+AGG | + | chr4_1:78246999-78247018 | None:intergenic | 35.0% | |
!! | TCTTGGTGGTGTTATTCGAT+GGG | + | chr4_1:78243631-78243650 | None:intergenic | 40.0% |
!! | TTCTTGGTGGTGTTATTCGA+TGG | + | chr4_1:78243632-78243651 | None:intergenic | 40.0% |
! | TCAAGAGATTTGGCTTAGGT+AGG | + | chr4_1:78243753-78243772 | None:intergenic | 40.0% |
! | TAGGTCAAGAGATTTGGCTT+AGG | + | chr4_1:78243757-78243776 | None:intergenic | 40.0% |
GGTATATAGGAATGGATGAG+TGG | + | chr4_1:78243840-78243859 | None:intergenic | 40.0% | |
! | ATCTAGGGTAGATAGTGTGT+TGG | + | chr4_1:78244068-78244087 | None:intergenic | 40.0% |
TATGGCTCTTAAGGTTACCT+TGG | - | chr4_1:78244105-78244124 | Msa0574630:CDS | 40.0% | |
! | ACAATCTTCCCATGCTGATT+TGG | + | chr4_1:78244197-78244216 | None:intergenic | 40.0% |
GTGAAGTTGCTTAACATGGA+TGG | + | chr4_1:78244379-78244398 | None:intergenic | 40.0% | |
!! | AGTACTTGATGATGTGGATG+AGG | + | chr4_1:78244458-78244477 | None:intergenic | 40.0% |
CTAAACAAAATGGAGGGAGA+AGG | - | chr4_1:78244476-78244495 | Msa0574630:CDS | 40.0% | |
GCAACAACAATATCAGCTCT+TGG | + | chr4_1:78244583-78244602 | None:intergenic | 40.0% | |
ATGGACTCCACTATTGTTAC+TGG | - | chr4_1:78244766-78244785 | Msa0574630:intron | 40.0% | |
!!! | GGACATGTATTTTGAAACGG+AGG | + | chr4_1:78245637-78245656 | None:intergenic | 40.0% |
CATATGTGAAGTGGTTGACT+TGG | + | chr4_1:78245431-78245450 | None:intergenic | 40.0% | |
!!! | GGACATGTATTTTGAAACGG+AGG | - | chr4_1:78245637-78245656 | Msa0574630:intron | 40.0% |
GGAGTTTAATCTCCATGAAC+CGG | - | chr4_1:78245860-78245879 | Msa0574630:intron | 40.0% | |
! | GGACATGACCTTTGAGAATA+CGG | - | chr4_1:78246141-78246160 | Msa0574630:CDS | 40.0% |
!!! | AGCTACTGCTTGGTGTTTTT+GGG | + | chr4_1:78246173-78246192 | None:intergenic | 40.0% |
! | CATAAGCATACAAGGTGTCT+TGG | + | chr4_1:78246249-78246268 | None:intergenic | 40.0% |
!! | CGAAGATGTTGCAGTTTTGA+AGG | + | chr4_1:78246345-78246364 | None:intergenic | 40.0% |
! | CGGTTTCAAATCATTTGCTG+CGG | + | chr4_1:78246467-78246486 | None:intergenic | 40.0% |
! | CGCAGCAAATGATTTGAAAC+CGG | - | chr4_1:78246465-78246484 | Msa0574630:CDS | 40.0% |
CTGGTGATTCTTGGATTTCA+GGG | - | chr4_1:78246752-78246771 | Msa0574630:CDS | 40.0% | |
! | TGGTGGTGACAATTGAAGAT+GGG | - | chr4_1:78246938-78246957 | Msa0574630:five_prime_UTR | 40.0% |
!! | ATTTGTGGGTGTCGAAGCTT+AGG | + | chr4_1:78243714-78243733 | None:intergenic | 45.0% |
! | GTTACACACATGAGGGTATG+GGG | + | chr4_1:78244023-78244042 | None:intergenic | 45.0% |
! | GGTTACACACATGAGGGTAT+GGG | + | chr4_1:78244024-78244043 | None:intergenic | 45.0% |
TGGTTACACACATGAGGGTA+TGG | + | chr4_1:78244025-78244044 | None:intergenic | 45.0% | |
!! | TGGTGGTGGTTCCAATGTAA+TGG | + | chr4_1:78244045-78244064 | None:intergenic | 45.0% |
TAGGGTAGATAGTGTGTTGG+TGG | + | chr4_1:78244065-78244084 | None:intergenic | 45.0% | |
GTTTGTGTGCTTCAATGGCT+TGG | + | chr4_1:78244132-78244151 | None:intergenic | 45.0% | |
GATGATGTGGATGAGGATGA+TGG | + | chr4_1:78244451-78244470 | None:intergenic | 45.0% | |
TCTGACCCTGAAAGCCAATA+TGG | + | chr4_1:78244520-78244539 | None:intergenic | 45.0% | |
GTCAGATAGAAAGCTGCTTC+AGG | - | chr4_1:78244534-78244553 | Msa0574630:CDS | 45.0% | |
! | ACAATATCAGCTCTTGGTGC+TGG | + | chr4_1:78244577-78244596 | None:intergenic | 45.0% |
GTTGTTGCACAAGATGGAAG+TGG | - | chr4_1:78244595-78244614 | Msa0574630:CDS | 45.0% | |
TTGCAGCTGCTAAGCTTAGT+GGG | - | chr4_1:78244647-78244666 | Msa0574630:intron | 45.0% | |
! | GTGCATTGGCATATGTGAAG+TGG | + | chr4_1:78245440-78245459 | None:intergenic | 45.0% |
ATTGCAGCTGTTATGGGAGA+TGG | - | chr4_1:78246106-78246125 | Msa0574630:CDS | 45.0% | |
GGGAGATGGTTTCATAGCTA+AGG | - | chr4_1:78246120-78246139 | Msa0574630:CDS | 45.0% | |
! | ATGACCTTTGAGAATACGGC+AGG | - | chr4_1:78246145-78246164 | Msa0574630:CDS | 45.0% |
!!! | GCTACTGCTTGGTGTTTTTG+GGG | + | chr4_1:78246172-78246191 | None:intergenic | 45.0% |
!!! | GAGCTACTGCTTGGTGTTTT+TGG | + | chr4_1:78246174-78246193 | None:intergenic | 45.0% |
ACGGTAGAAAACGGAGTGAT+CGG | + | chr4_1:78246209-78246228 | None:intergenic | 45.0% | |
! | GAAGGCACAACGGTAGAAAA+CGG | + | chr4_1:78246218-78246237 | None:intergenic | 45.0% |
TTCTACCGTTGTGCCTTCAA+AGG | - | chr4_1:78246220-78246239 | Msa0574630:CDS | 45.0% | |
ACGGTTGGCATAAGCATACA+AGG | + | chr4_1:78246257-78246276 | None:intergenic | 45.0% | |
! | GTGTTCTGTTGGTTGCTCAT+TGG | + | chr4_1:78246376-78246395 | None:intergenic | 45.0% |
! | TGTTCTTCCCTGTGCTGTTA+CGG | + | chr4_1:78246398-78246417 | None:intergenic | 45.0% |
AATGCAAAACCACCCATCCA+TGG | + | chr4_1:78246598-78246617 | None:intergenic | 45.0% | |
GCTGGTGATTCTTGGATTTC+AGG | - | chr4_1:78246751-78246770 | Msa0574630:CDS | 45.0% | |
GATTCTTGGATTTCAGGGAG+TGG | - | chr4_1:78246757-78246776 | Msa0574630:CDS | 45.0% | |
AAAAGAGGATGGTGAAAGCG+TGG | - | chr4_1:78246918-78246937 | Msa0574630:five_prime_UTR | 45.0% | |
! | GTGGTGGTGACAATTGAAGA+TGG | - | chr4_1:78246937-78246956 | Msa0574630:five_prime_UTR | 45.0% |
GGTGGTGACAATTGAAGATG+GGG | - | chr4_1:78246939-78246958 | Msa0574630:five_prime_UTR | 45.0% | |
TGGGTGTTTGCCTTGTACAA+AGG | - | chr4_1:78246986-78247005 | Msa0574630:five_prime_UTR | 45.0% | |
!! | TTTGATAAAAAAAAAAATAA+TGG | + | chr4_1:78247044-78247063 | None:intergenic | 5.0% |
!!! | ATTATTTTTTTTTTTATCAA+AGG | - | chr4_1:78247043-78247062 | Msa0574630:five_prime_UTR | 5.0% |
!!! | TTATTTTTTTTTTTATCAAA+GGG | - | chr4_1:78247044-78247063 | Msa0574630:five_prime_UTR | 5.0% |
TTGGCTTAGGTAGGCCATAC+AGG | + | chr4_1:78243744-78243763 | None:intergenic | 50.0% | |
!! | AGATAGTGTGTTGGTGGTGG+TGG | + | chr4_1:78244059-78244078 | None:intergenic | 50.0% |
! | GGTAGATAGTGTGTTGGTGG+TGG | + | chr4_1:78244062-78244081 | None:intergenic | 50.0% |
!! | TGCTTCAATGGCTTGGTCCA+AGG | + | chr4_1:78244125-78244144 | None:intergenic | 50.0% |
ACAAGCGTGCCAAATCAGCA+TGG | - | chr4_1:78244185-78244204 | Msa0574630:CDS | 50.0% | |
CAAGCGTGCCAAATCAGCAT+GGG | - | chr4_1:78244186-78244205 | Msa0574630:CDS | 50.0% | |
! | TGCAACAACACCCTCTGAGA+TGG | + | chr4_1:78244632-78244651 | None:intergenic | 50.0% |
GTTGCAGCTGCTAAGCTTAG+TGG | - | chr4_1:78244646-78244665 | Msa0574630:intron | 50.0% | |
GCTGCTAAGCTTAGTGGGAA+AGG | - | chr4_1:78244652-78244671 | Msa0574630:intron | 50.0% | |
! | GGTAGCCTTTGAAGGCACAA+CGG | + | chr4_1:78246228-78246247 | None:intergenic | 50.0% |
! | GGTGTCTTGGTAGCCTTTGA+AGG | + | chr4_1:78246236-78246255 | None:intergenic | 50.0% |
TGCAGTCGCGGTAGAATTGA+CGG | + | chr4_1:78246276-78246295 | None:intergenic | 50.0% | |
TACCGCGACTGCAACATCTA+CGG | - | chr4_1:78246283-78246302 | Msa0574630:CDS | 50.0% | |
TTCCGTAGATGTTGCAGTCG+CGG | + | chr4_1:78246288-78246307 | None:intergenic | 50.0% | |
! | GTGCTGTTACGGTGTTCTGT+TGG | + | chr4_1:78246387-78246406 | None:intergenic | 50.0% |
ACAGAACACCGTAACAGCAC+AGG | - | chr4_1:78246387-78246406 | Msa0574630:CDS | 50.0% | |
CAGAACACCGTAACAGCACA+GGG | - | chr4_1:78246388-78246407 | Msa0574630:CDS | 50.0% | |
ATTCAGAAGGTTGGGCTCCA+TGG | - | chr4_1:78246578-78246597 | Msa0574630:CDS | 50.0% | |
!! | GTTGGTGGTGGTGCTAATAC+TGG | - | chr4_1:78246649-78246668 | Msa0574630:CDS | 50.0% |
GGTGGAAGAGTTAATTGGCC+TGG | - | chr4_1:78246670-78246689 | Msa0574630:CDS | 50.0% | |
AAGCTGCTTCAGGCAACACC+AGG | - | chr4_1:78244544-78244563 | Msa0574630:CDS | 55.0% | |
AGCTGCTTCAGGCAACACCA+GGG | - | chr4_1:78244545-78244564 | Msa0574630:CDS | 55.0% | |
TTCAGGCAACACCAGGGTCA+GGG | - | chr4_1:78244551-78244570 | Msa0574630:CDS | 55.0% | |
GGGTCCTGCCGTATTCTCAA+AGG | + | chr4_1:78246152-78246171 | None:intergenic | 55.0% | |
CAAGCAGTAGCTCTCCGTTC+CGG | - | chr4_1:78246181-78246200 | Msa0574630:CDS | 55.0% | |
GTCGCGGTAGAATTGACGGT+TGG | + | chr4_1:78246272-78246291 | None:intergenic | 55.0% | |
AGAAGGTTGGGCTCCATGGA+TGG | - | chr4_1:78246582-78246601 | Msa0574630:CDS | 55.0% | |
GAAGGTTGGGCTCCATGGAT+GGG | - | chr4_1:78246583-78246602 | Msa0574630:CDS | 55.0% | |
! | GGTGGTGGTGCTAATACTGG+TGG | - | chr4_1:78246652-78246671 | Msa0574630:CDS | 55.0% |
!! | AGTGGTGTGCCGTTTGATGC+AGG | - | chr4_1:78246775-78246794 | Msa0574630:CDS | 55.0% |
! | AGAGGATGGTGAAAGCGTGG+TGG | - | chr4_1:78246921-78246940 | Msa0574630:five_prime_UTR | 55.0% |
CTTCAGGCAACACCAGGGTC+AGG | - | chr4_1:78244550-78244569 | Msa0574630:CDS | 60.0% | |
CGGAACGGAGAGCTACTGCT+TGG | + | chr4_1:78246183-78246202 | None:intergenic | 60.0% | |
GAAAACGGAGTGATCGGCGC+CGG | + | chr4_1:78246203-78246222 | None:intergenic | 60.0% | |
GGTTGGGCTCCATGGATGGG+TGG | - | chr4_1:78246586-78246605 | Msa0574630:CDS | 65.0% | |
!! | CTTGGTGCTGGCCCTGACCC+TGG | + | chr4_1:78244565-78244584 | None:intergenic | 70.0% |
! | CGGAGTGATCGGCGCCGGAA+CGG | + | chr4_1:78246198-78246217 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 78243598 | 78247131 | 78243598 | ID=Msa0574630;Name=Msa0574630 |
chr4_1 | mRNA | 78243598 | 78247131 | 78243598 | ID=Msa0574630-mRNA-1;Parent=Msa0574630;Name=Msa0574630-mRNA-1;_AED=0.00;_eAED=0.00;_QI=307|1|1|1|1|1|2|327|541 |
chr4_1 | exon | 78243598 | 78244616 | 78243598 | ID=Msa0574630-mRNA-1:exon:27727;Parent=Msa0574630-mRNA-1 |
chr4_1 | exon | 78245891 | 78247131 | 78245891 | ID=Msa0574630-mRNA-1:exon:27726;Parent=Msa0574630-mRNA-1 |
chr4_1 | five_prime_UTR | 78246825 | 78247131 | 78246825 | ID=Msa0574630-mRNA-1:five_prime_utr;Parent=Msa0574630-mRNA-1 |
chr4_1 | CDS | 78245891 | 78246824 | 78245891 | ID=Msa0574630-mRNA-1:cds;Parent=Msa0574630-mRNA-1 |
chr4_1 | CDS | 78243925 | 78244616 | 78243925 | ID=Msa0574630-mRNA-1:cds;Parent=Msa0574630-mRNA-1 |
chr4_1 | three_prime_UTR | 78243598 | 78243924 | 78243598 | ID=Msa0574630-mRNA-1:three_prime_utr;Parent=Msa0574630-mRNA-1 |
Gene Sequence |
Protein sequence |