Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0282590 | XP_013463390.2 | 96.575 | 584 | 19 | 1 | 4 | 587 | 2 | 584 | 0.0 | 1162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012520 | Msa0282590 | 0.801086 | 1.062801e-48 | -8.615850e-47 |
| Msa0051460 | Msa0282590 | 0.803441 | 3.480277e-49 | -8.615850e-47 |
| Msa0055710 | Msa0282590 | 0.809406 | 1.922548e-50 | -8.615850e-47 |
| Msa0055720 | Msa0282590 | 0.822576 | 2.200115e-53 | -8.615850e-47 |
| Msa0055750 | Msa0282590 | 0.818271 | 2.138309e-52 | -8.615850e-47 |
| Msa0058340 | Msa0282590 | 0.800023 | 1.750449e-48 | -8.615850e-47 |
| Msa0077390 | Msa0282590 | 0.801898 | 7.247007e-49 | -8.615850e-47 |
| Msa0088550 | Msa0282590 | 0.838029 | 3.666078e-57 | -8.615850e-47 |
| Msa0090280 | Msa0282590 | -0.825505 | 4.520421e-54 | -8.615850e-47 |
| Msa0093440 | Msa0282590 | 0.805706 | 1.172811e-49 | -8.615850e-47 |
| Msa0101840 | Msa0282590 | 0.801643 | 8.173980e-49 | -8.615850e-47 |
| Msa0124110 | Msa0282590 | 0.834534 | 2.834927e-56 | -8.615850e-47 |
| Msa0135360 | Msa0282590 | 0.836011 | 1.201635e-56 | -8.615850e-47 |
| Msa0135820 | Msa0282590 | 0.806474 | 8.082162e-50 | -8.615850e-47 |
| Msa0141230 | Msa0282590 | 0.829963 | 3.836597e-55 | -8.615850e-47 |
| Msa0142240 | Msa0282590 | 0.820295 | 7.398300e-53 | -8.615850e-47 |
| Msa0143920 | Msa0282590 | 0.805184 | 1.508925e-49 | -8.615850e-47 |
| Msa0152420 | Msa0282590 | 0.802451 | 5.576175e-49 | -8.615850e-47 |
| Msa0153440 | Msa0282590 | 0.810296 | 1.237182e-50 | -8.615850e-47 |
| Msa0165430 | Msa0282590 | 0.838098 | 3.517395e-57 | -8.615850e-47 |
| Msa0165510 | Msa0282590 | 0.806887 | 6.611045e-50 | -8.615850e-47 |
| Msa0179860 | Msa0282590 | 0.822717 | 2.040043e-53 | -8.615850e-47 |
| Msa0185640 | Msa0282590 | -0.807662 | 4.530500e-50 | -8.615850e-47 |
| Msa0190640 | Msa0282590 | 0.808784 | 2.612522e-50 | -8.615850e-47 |
| Msa0195770 | Msa0282590 | 0.822237 | 2.637788e-53 | -8.615850e-47 |
| Msa0201250 | Msa0282590 | 0.826829 | 2.187821e-54 | -8.615850e-47 |
| Msa0201330 | Msa0282590 | 0.942737 | 4.228639e-102 | -8.615850e-47 |
| Msa0201370 | Msa0282590 | 0.944400 | 2.091332e-103 | -8.615850e-47 |
| Msa0201390 | Msa0282590 | 0.845930 | 2.986955e-59 | -8.615850e-47 |
| Msa0208390 | Msa0282590 | 0.828286 | 9.779846e-55 | -8.615850e-47 |
| Msa0212310 | Msa0282590 | 0.808541 | 2.944085e-50 | -8.615850e-47 |
| Msa0217400 | Msa0282590 | 0.806657 | 7.396777e-50 | -8.615850e-47 |
| Msa0226250 | Msa0282590 | 0.802811 | 4.698215e-49 | -8.615850e-47 |
| Msa0243910 | Msa0282590 | 0.923000 | 4.723042e-89 | -8.615850e-47 |
| Msa0243930 | Msa0282590 | 0.955139 | 6.018423e-113 | -8.615850e-47 |
| Msa0243940 | Msa0282590 | 0.852991 | 3.209690e-61 | -8.615850e-47 |
| Msa0245880 | Msa0282590 | 0.831170 | 1.942837e-55 | -8.615850e-47 |
| Msa0257250 | Msa0282590 | 0.813991 | 1.933923e-51 | -8.615850e-47 |
| Msa0261260 | Msa0282590 | 0.813687 | 2.256067e-51 | -8.615850e-47 |
| Msa0262520 | Msa0282590 | 0.801753 | 7.760433e-49 | -8.615850e-47 |
| Msa0266000 | Msa0282590 | -0.841423 | 4.796265e-58 | -8.615850e-47 |
| Msa0270440 | Msa0282590 | -0.801428 | 9.048630e-49 | -8.615850e-47 |
| Msa0275670 | Msa0282590 | 0.821934 | 3.100663e-53 | -8.615850e-47 |
| Msa0282590 | Msa0282600 | 0.832953 | 7.041233e-56 | -8.615850e-47 |
| Msa0282590 | Msa0296560 | 0.800116 | 1.675912e-48 | -8.615850e-47 |
| Msa0282590 | Msa0297960 | 0.808351 | 3.232172e-50 | -8.615850e-47 |
| Msa0282590 | Msa0299200 | 0.841557 | 4.419544e-58 | -8.615850e-47 |
| Msa0282590 | Msa0304740 | 0.846585 | 1.980895e-59 | -8.615850e-47 |
| Msa0282590 | Msa0304990 | 0.818579 | 1.820815e-52 | -8.615850e-47 |
| Msa0282590 | Msa0309080 | -0.805460 | 1.320525e-49 | -8.615850e-47 |
| Msa0282590 | Msa0331590 | 0.845020 | 5.267528e-59 | -8.615850e-47 |
| Msa0282590 | Msa0331920 | 0.845275 | 4.496515e-59 | -8.615850e-47 |
| Msa0282590 | Msa0334420 | 0.812727 | 3.666225e-51 | -8.615850e-47 |
| Msa0282590 | Msa0338110 | 0.805452 | 1.326047e-49 | -8.615850e-47 |
| Msa0282590 | Msa0342340 | -0.813350 | 2.676333e-51 | -8.615850e-47 |
| Msa0282590 | Msa0356890 | -0.817738 | 2.822216e-52 | -8.615850e-47 |
| Msa0282590 | Msa0362740 | 0.842352 | 2.725147e-58 | -8.615850e-47 |
| Msa0282590 | Msa0369360 | 0.808998 | 2.351000e-50 | -8.615850e-47 |
| Msa0282590 | Msa0371420 | -0.806788 | 6.939364e-50 | -8.615850e-47 |
| Msa0282590 | Msa0414070 | 0.800675 | 1.289710e-48 | -8.615850e-47 |
| Msa0282590 | Msa0416800 | 0.818811 | 1.613214e-52 | -8.615850e-47 |
| Msa0282590 | Msa0438050 | 0.800244 | 1.578734e-48 | -8.615850e-47 |
| Msa0282590 | Msa0448550 | -0.833763 | 4.423988e-56 | -8.615850e-47 |
| Msa0282590 | Msa0452680 | 0.805733 | 1.157508e-49 | -8.615850e-47 |
| Msa0282590 | Msa0457370 | 0.833346 | 5.622432e-56 | -8.615850e-47 |
| Msa0282590 | Msa0463460 | 0.810903 | 9.146213e-51 | -8.615850e-47 |
| Msa0282590 | Msa0465680 | -0.803547 | 3.308882e-49 | -8.615850e-47 |
| Msa0282590 | Msa0481320 | 0.802205 | 6.264115e-49 | -8.615850e-47 |
| Msa0282590 | Msa0482870 | 0.804688 | 1.915449e-49 | -8.615850e-47 |
| Msa0282590 | Msa0483650 | 0.802980 | 4.337118e-49 | -8.615850e-47 |
| Msa0282590 | Msa0490480 | 0.806704 | 7.227133e-50 | -8.615850e-47 |
| Msa0282590 | Msa0492740 | 0.804785 | 1.828864e-49 | -8.615850e-47 |
| Msa0282590 | Msa0509020 | 0.804165 | 2.462388e-49 | -8.615850e-47 |
| Msa0282590 | Msa0528970 | 0.802415 | 5.670759e-49 | -8.615850e-47 |
| Msa0282590 | Msa0533290 | 0.814129 | 1.802890e-51 | -8.615850e-47 |
| Msa0282590 | Msa0535210 | 0.803369 | 3.602960e-49 | -8.615850e-47 |
| Msa0282590 | Msa0557680 | 0.835393 | 1.722934e-56 | -8.615850e-47 |
| Msa0282590 | Msa0559250 | 0.817354 | 3.445178e-52 | -8.615850e-47 |
| Msa0282590 | Msa0562650 | 0.804900 | 1.729834e-49 | -8.615850e-47 |
| Msa0282590 | Msa0567020 | 0.849977 | 2.286333e-60 | -8.615850e-47 |
| Msa0282590 | Msa0569370 | 0.841387 | 4.899906e-58 | -8.615850e-47 |
| Msa0282590 | Msa0574630 | 0.803664 | 3.128911e-49 | -8.615850e-47 |
| Msa0282590 | Msa0577060 | 0.808752 | 2.653860e-50 | -8.615850e-47 |
| Msa0282590 | Msa0586430 | 0.840431 | 8.733135e-58 | -8.615850e-47 |
| Msa0282590 | Msa0607180 | 0.813034 | 3.140064e-51 | -8.615850e-47 |
| Msa0282590 | Msa0616560 | -0.800024 | 1.749345e-48 | -8.615850e-47 |
| Msa0282590 | Msa0623170 | 0.805768 | 1.137997e-49 | -8.615850e-47 |
| Msa0282590 | Msa0626470 | 0.805745 | 1.150836e-49 | -8.615850e-47 |
| Msa0282590 | Msa0641020 | 0.825554 | 4.401026e-54 | -8.615850e-47 |
| Msa0282590 | Msa0645460 | 0.811463 | 6.912561e-51 | -8.615850e-47 |
| Msa0282590 | Msa0647360 | 0.810808 | 9.588217e-51 | -8.615850e-47 |
| Msa0282590 | Msa0653020 | 0.817105 | 3.917546e-52 | -8.615850e-47 |
| Msa0282590 | Msa0655990 | -0.800466 | 1.422477e-48 | -8.615850e-47 |
| Msa0282590 | Msa0658570 | 0.840423 | 8.772963e-58 | -8.615850e-47 |
| Msa0282590 | Msa0659510 | 0.827161 | 1.822356e-54 | -8.615850e-47 |
| Msa0282590 | Msa0660870 | 0.801346 | 9.404820e-49 | -8.615850e-47 |
| Msa0282590 | Msa0660880 | -0.806107 | 9.660837e-50 | -8.615850e-47 |
| Msa0282590 | Msa0664160 | 0.853907 | 1.751361e-61 | -8.615850e-47 |
| Msa0282590 | Msa0664850 | 0.807039 | 6.142144e-50 | -8.615850e-47 |
| Msa0282590 | Msa0678240 | 0.801191 | 1.011514e-48 | -8.615850e-47 |
| Msa0282590 | Msa0692620 | 0.817497 | 3.197633e-52 | -8.615850e-47 |
| Msa0282590 | Msa0695410 | 0.823708 | 1.197515e-53 | -8.615850e-47 |
| Msa0282590 | Msa0696740 | 0.830792 | 2.405361e-55 | -8.615850e-47 |
| Msa0282590 | Msa0696770 | 0.829904 | 3.965859e-55 | -8.615850e-47 |
| Msa0282590 | Msa0701840 | -0.814385 | 1.583148e-51 | -8.615850e-47 |
| Msa0282590 | Msa0703490 | 0.859507 | 3.943231e-63 | -8.615850e-47 |
| Msa0282590 | Msa0708330 | 0.806303 | 8.781042e-50 | -8.615850e-47 |
| Msa0282590 | Msa0715720 | 0.818766 | 1.651218e-52 | -8.615850e-47 |
| Msa0282590 | Msa0716740 | -0.802701 | 4.951856e-49 | -8.615850e-47 |
| Msa0282590 | Msa0718240 | 0.820499 | 6.641640e-53 | -8.615850e-47 |
| Msa0282590 | Msa0719490 | -0.823011 | 1.742129e-53 | -8.615850e-47 |
| Msa0282590 | Msa0722930 | 0.807719 | 4.406629e-50 | -8.615850e-47 |
| Msa0282590 | Msa0723140 | 0.809772 | 1.603792e-50 | -8.615850e-47 |
| Msa0282590 | Msa0733200 | 0.843789 | 1.129064e-58 | -8.615850e-47 |
| Msa0282590 | Msa0776030 | 0.812226 | 4.716352e-51 | -8.615850e-47 |
| Msa0282590 | Msa0777930 | 0.808940 | 2.418893e-50 | -8.615850e-47 |
| Msa0282590 | Msa0791070 | 0.811292 | 7.529221e-51 | -8.615850e-47 |
| Msa0282590 | Msa0799290 | -0.800936 | 1.140437e-48 | -8.615850e-47 |
| Msa0282590 | Msa0801710 | 0.800017 | 1.755543e-48 | -8.615850e-47 |
| Msa0282590 | Msa0811000 | 0.802194 | 6.298101e-49 | -8.615850e-47 |
| Msa0282590 | Msa0811790 | 0.801659 | 8.110355e-49 | -8.615850e-47 |
| Msa0282590 | Msa0837510 | -0.803664 | 3.128840e-49 | -8.615850e-47 |
| Msa0282590 | Msa0839230 | 0.847517 | 1.100323e-59 | -8.615850e-47 |
| Msa0282590 | Msa0839330 | 0.812423 | 4.271359e-51 | -8.615850e-47 |
| Msa0282590 | Msa0843280 | 0.826645 | 2.421600e-54 | -8.615850e-47 |
| Msa0282590 | Msa0867890 | 0.801099 | 1.056205e-48 | -8.615850e-47 |
| Msa0282590 | Msa0868020 | 0.801510 | 8.702491e-49 | -8.615850e-47 |
| Msa0282590 | Msa0885010 | 0.807822 | 4.189948e-50 | -8.615850e-47 |
| Msa0282590 | Msa0885240 | 0.818588 | 1.812567e-52 | -8.615850e-47 |
| Msa0282590 | Msa0885320 | 0.814155 | 1.778874e-51 | -8.615850e-47 |
| Msa0282590 | Msa0886330 | -0.802911 | 4.480602e-49 | -8.615850e-47 |
| Msa0282590 | Msa0886660 | 0.836153 | 1.105707e-56 | -8.615850e-47 |
| Msa0282590 | Msa0891040 | 0.811090 | 8.331670e-51 | -8.615850e-47 |
| Msa0282590 | Msa0900200 | 0.812617 | 3.875118e-51 | -8.615850e-47 |
| Msa0282590 | Msa0912200 | 0.807192 | 5.698855e-50 | -8.615850e-47 |
| Msa0282590 | Msa0912470 | 0.821355 | 4.219929e-53 | -8.615850e-47 |
| Msa0282590 | Msa0921630 | 0.840558 | 8.087411e-58 | -8.615850e-47 |
| Msa0282590 | Msa0946120 | 0.840631 | 7.741508e-58 | -8.615850e-47 |
| Msa0282590 | Msa0946680 | 0.827743 | 1.321513e-54 | -8.615850e-47 |
| Msa0282590 | Msa0951720 | 0.836819 | 7.481290e-57 | -8.615850e-47 |
| Msa0282590 | Msa0960270 | 0.819839 | 9.406110e-53 | -8.615850e-47 |
| Msa0282590 | Msa0965520 | 0.847381 | 1.199130e-59 | -8.615850e-47 |
| Msa0282590 | Msa0976640 | 0.803203 | 3.898498e-49 | -8.615850e-47 |
| Msa0282590 | Msa0990960 | 0.806479 | 8.063874e-50 | -8.615850e-47 |
| Msa0282590 | Msa1000020 | 0.820136 | 8.044350e-53 | -8.615850e-47 |
| Msa0282590 | Msa1001200 | 0.837739 | 4.350509e-57 | -8.615850e-47 |
| Msa0282590 | Msa1008340 | 0.852693 | 3.904578e-61 | -8.615850e-47 |
| Msa0282590 | Msa1009000 | 0.801993 | 6.928570e-49 | -8.615850e-47 |
| Msa0282590 | Msa1009020 | 0.850854 | 1.296944e-60 | -8.615850e-47 |
| Msa0282590 | Msa1026500 | 0.843464 | 1.378868e-58 | -8.615850e-47 |
| Msa0282590 | Msa1029090 | 0.832268 | 1.041500e-55 | -8.615850e-47 |
| Msa0282590 | Msa1036390 | 0.817059 | 4.012654e-52 | -8.615850e-47 |
| Msa0282590 | Msa1041730 | 0.832567 | 8.784342e-56 | -8.615850e-47 |
| Msa0282590 | Msa1042710 | 0.801114 | 1.049181e-48 | -8.615850e-47 |
| Msa0282590 | Msa1044090 | 0.928847 | 1.616864e-92 | -8.615850e-47 |
| Msa0282590 | Msa1049950 | 0.840450 | 8.631607e-58 | -8.615850e-47 |
| Msa0282590 | Msa1055430 | 0.806435 | 8.236623e-50 | -8.615850e-47 |
| Msa0282590 | Msa1072490 | 0.804086 | 2.557790e-49 | -8.615850e-47 |
| Msa0282590 | Msa1074570 | 0.845168 | 4.804940e-59 | -8.615850e-47 |
| Msa0282590 | Msa1076480 | 0.804571 | 2.026783e-49 | -8.615850e-47 |
| Msa0282590 | Msa1076680 | 0.816124 | 6.498801e-52 | -8.615850e-47 |
| Msa0282590 | Msa1083410 | 0.850317 | 1.836723e-60 | -8.615850e-47 |
| Msa0282590 | Msa1098560 | 0.833528 | 5.065518e-56 | -8.615850e-47 |
| Msa0282590 | Msa1100170 | 0.829185 | 5.930053e-55 | -8.615850e-47 |
| Msa0282590 | Msa1111760 | 0.856475 | 3.138575e-62 | -8.615850e-47 |
| Msa0282590 | Msa1121660 | 0.842797 | 2.076618e-58 | -8.615850e-47 |
| Msa0282590 | Msa1122660 | 0.824986 | 5.993745e-54 | -8.615850e-47 |
| Msa0282590 | Msa1125080 | 0.836120 | 1.127099e-56 | -8.615850e-47 |
| Msa0282590 | Msa1128160 | 0.827351 | 1.641449e-54 | -8.615850e-47 |
| Msa0282590 | Msa1139240 | 0.862163 | 6.157051e-64 | -8.615850e-47 |
| Msa0282590 | Msa1154070 | 0.857739 | 1.329416e-62 | -8.615850e-47 |
| Msa0282590 | Msa1156180 | 0.840302 | 9.438766e-58 | -8.615850e-47 |
| Msa0282590 | Msa1165360 | 0.828466 | 8.850029e-55 | -8.615850e-47 |
| Msa0282590 | Msa1167220 | 0.840496 | 8.395358e-58 | -8.615850e-47 |
| Msa0282590 | Msa1177060 | 0.806360 | 8.544640e-50 | -8.615850e-47 |
| Msa0282590 | Msa1177070 | 0.820730 | 5.876656e-53 | -8.615850e-47 |
| Msa0282590 | Msa1179120 | 0.829372 | 5.340059e-55 | -8.615850e-47 |
| Msa0282590 | Msa1188420 | 0.822133 | 2.788839e-53 | -8.615850e-47 |
| Msa0282590 | Msa1204980 | -0.805989 | 1.022802e-49 | -8.615850e-47 |
| Msa0282590 | Msa1205010 | -0.804039 | 2.615444e-49 | -8.615850e-47 |
| Msa0282590 | Msa1209560 | 0.826696 | 2.354964e-54 | -8.615850e-47 |
| Msa0282590 | Msa1217900 | -0.835087 | 2.058126e-56 | -8.615850e-47 |
| Msa0282590 | Msa1228210 | 0.816699 | 4.833969e-52 | -8.615850e-47 |
| Msa0282590 | Msa1238130 | 0.805682 | 1.186255e-49 | -8.615850e-47 |
| Msa0282590 | Msa1239310 | 0.828738 | 7.607651e-55 | -8.615850e-47 |
| Msa0282590 | Msa1246040 | 0.850657 | 1.473651e-60 | -8.615850e-47 |
| Msa0282590 | Msa1254950 | 0.810396 | 1.176730e-50 | -8.615850e-47 |
| Msa0282590 | Msa1256540 | -0.813459 | 2.531975e-51 | -8.615850e-47 |
| Msa0282590 | Msa1267200 | 0.800889 | 1.166055e-48 | -8.615850e-47 |
| Msa0282590 | Msa1271280 | 0.819735 | 9.935860e-53 | -8.615850e-47 |
| Msa0282590 | Msa1271290 | 0.809566 | 1.775867e-50 | -8.615850e-47 |
| Msa0282590 | Msa1271300 | 0.822912 | 1.837261e-53 | -8.615850e-47 |
| Msa0282590 | Msa1279860 | 0.822609 | 2.162113e-53 | -8.615850e-47 |
| Msa0282590 | Msa1279870 | 0.822583 | 2.192066e-53 | -8.615850e-47 |
| Msa0282590 | Msa1284140 | 0.827145 | 1.838696e-54 | -8.615850e-47 |
| Msa0282590 | Msa1287560 | 0.806732 | 7.130203e-50 | -8.615850e-47 |
| Msa0282590 | Msa1295690 | 0.807398 | 5.154123e-50 | -8.615850e-47 |
| Msa0282590 | Msa1296960 | -0.813206 | 2.877863e-51 | -8.615850e-47 |
| Msa0282590 | Msa1298260 | 0.809998 | 1.434009e-50 | -8.615850e-47 |
| Msa0282590 | Msa1298910 | 0.819338 | 1.223750e-52 | -8.615850e-47 |
| Msa0282590 | Msa1316980 | 0.826428 | 2.727417e-54 | -8.615850e-47 |
| Msa0282590 | Msa1319930 | 0.813496 | 2.485524e-51 | -8.615850e-47 |
| Msa0282590 | Msa1324780 | 0.803917 | 2.772234e-49 | -8.615850e-47 |
| Msa0282590 | Msa1328290 | -0.809270 | 2.055524e-50 | -8.615850e-47 |
| Msa0282590 | Msa1329250 | 0.800604 | 1.333307e-48 | -8.615850e-47 |
| Msa0282590 | Msa1330530 | 0.820976 | 5.160857e-53 | -8.615850e-47 |
| Msa0282590 | Msa1335770 | 0.837625 | 4.655183e-57 | -8.615850e-47 |
| Msa0282590 | Msa1344010 | 0.808312 | 3.294960e-50 | -8.615850e-47 |
| Msa0282590 | Msa1376890 | 0.832712 | 8.083835e-56 | -8.615850e-47 |
| Msa0282590 | Msa1377070 | 0.802477 | 5.506464e-49 | -8.615850e-47 |
| Msa0282590 | Msa1381940 | 0.830645 | 2.613555e-55 | -8.615850e-47 |
| Msa0282590 | Msa1399500 | 0.805685 | 1.184820e-49 | -8.615850e-47 |
| Msa0282590 | Msa1409750 | 0.808408 | 3.142589e-50 | -8.615850e-47 |
| Msa0282590 | Msa1445250 | 0.817830 | 2.689877e-52 | -8.615850e-47 |
| Msa0282590 | Msa1447440 | 0.802086 | 6.629622e-49 | -8.615850e-47 |
| Msa0282590 | Msa1453250 | 0.801697 | 7.968342e-49 | -8.615850e-47 |
| Msa0282590 | Msa1454000 | 0.839481 | 1.544196e-57 | -8.615850e-47 |
| Msa0282590 | Msa1460890 | 0.806892 | 6.597153e-50 | -8.615850e-47 |
| Msa0282590 | Msa1465900 | 0.803017 | 4.260599e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0282590 | MtrunA17_Chr2g0297701 | 96.575 | 584 | 19 | 1 | 4 | 587 | 2 | 584 | 0.0 | 1162 |
| Msa0282590 | MtrunA17_Chr2g0297691 | 53.061 | 588 | 261 | 8 | 11 | 586 | 121 | 705 | 0.0 | 617 |
| Msa0282590 | MtrunA17_Chr2g0297681 | 51.282 | 585 | 267 | 8 | 13 | 586 | 126 | 703 | 0.0 | 592 |
| Msa0282590 | MtrunA17_Chr2g0297651 | 50.893 | 560 | 264 | 5 | 35 | 586 | 148 | 704 | 0.0 | 572 |
| Msa0282590 | MtrunA17_Chr2g0297711 | 47.849 | 581 | 247 | 5 | 11 | 587 | 13 | 541 | 0.0 | 540 |
| Msa0282590 | MtrunA17_Chr2g0297481 | 51.927 | 493 | 220 | 7 | 103 | 586 | 1 | 485 | 8.11e-173 | 499 |
| Msa0282590 | MtrunA17_Chr2g0297491 | 53.553 | 394 | 172 | 5 | 201 | 586 | 1 | 391 | 4.00e-138 | 407 |
| Msa0282590 | MtrunA17_Chr5g0410171 | 32.143 | 616 | 319 | 16 | 50 | 574 | 126 | 733 | 1.47e-85 | 281 |
| Msa0282590 | MtrunA17_Chr5g0443001 | 32.470 | 579 | 328 | 13 | 49 | 573 | 33 | 602 | 3.06e-76 | 253 |
| Msa0282590 | MtrunA17_Chr5g0410201 | 39.820 | 334 | 188 | 5 | 247 | 574 | 1 | 327 | 1.07e-73 | 238 |
| Msa0282590 | MtrunA17_Chr5g0410271 | 41.424 | 309 | 168 | 5 | 275 | 575 | 24 | 327 | 4.18e-71 | 231 |
| Msa0282590 | MtrunA17_Chr6g0456141 | 38.012 | 342 | 184 | 6 | 251 | 571 | 46 | 380 | 1.19e-65 | 219 |
| Msa0282590 | MtrunA17_Chr6g0457101 | 29.580 | 595 | 352 | 16 | 50 | 587 | 115 | 699 | 2.65e-64 | 223 |
| Msa0282590 | MtrunA17_Chr5g0410371 | 40.753 | 292 | 170 | 2 | 285 | 573 | 4 | 295 | 1.84e-63 | 211 |
| Msa0282590 | MtrunA17_Chr5g0410341 | 34.301 | 379 | 217 | 7 | 223 | 576 | 376 | 747 | 2.38e-62 | 219 |
| Msa0282590 | MtrunA17_Chr5g0410341 | 29.255 | 188 | 114 | 7 | 44 | 213 | 117 | 303 | 7.30e-12 | 68.6 |
| Msa0282590 | MtrunA17_Chr5g0410461 | 40.446 | 314 | 172 | 4 | 266 | 573 | 159 | 463 | 1.05e-61 | 211 |
| Msa0282590 | MtrunA17_Chr6g0456101 | 40.864 | 301 | 175 | 3 | 285 | 585 | 453 | 750 | 2.78e-59 | 211 |
| Msa0282590 | MtrunA17_Chr3g0100741 | 28.108 | 555 | 341 | 12 | 48 | 554 | 34 | 578 | 3.75e-58 | 204 |
| Msa0282590 | MtrunA17_Chr3g0096941 | 28.700 | 554 | 340 | 13 | 48 | 554 | 34 | 579 | 3.50e-57 | 202 |
| Msa0282590 | MtrunA17_Chr1g0211541 | 28.545 | 536 | 349 | 9 | 53 | 580 | 2 | 511 | 1.25e-54 | 194 |
| Msa0282590 | MtrunA17_Chr2g0297631 | 47.120 | 191 | 98 | 2 | 37 | 226 | 155 | 343 | 2.10e-54 | 198 |
| Msa0282590 | MtrunA17_Chr5g0410581 | 36.304 | 303 | 186 | 4 | 275 | 570 | 490 | 792 | 5.38e-52 | 191 |
| Msa0282590 | MtrunA17_Chr3g0100301 | 45.813 | 203 | 109 | 1 | 368 | 569 | 205 | 407 | 8.08e-52 | 183 |
| Msa0282590 | MtrunA17_Chr2g0286601 | 33.548 | 310 | 200 | 3 | 261 | 568 | 370 | 675 | 6.08e-48 | 178 |
| Msa0282590 | MtrunA17_Chr2g0286601 | 29.148 | 223 | 124 | 6 | 50 | 259 | 9 | 210 | 8.17e-14 | 74.7 |
| Msa0282590 | MtrunA17_Chr3g0098481 | 35.052 | 291 | 182 | 4 | 285 | 569 | 39 | 328 | 9.10e-48 | 170 |
| Msa0282590 | MtrunA17_Chr1g0211531 | 27.586 | 522 | 342 | 12 | 46 | 556 | 21 | 517 | 4.83e-46 | 170 |
| Msa0282590 | MtrunA17_Chr5g0410191 | 42.857 | 189 | 107 | 1 | 383 | 571 | 2 | 189 | 4.02e-45 | 158 |
| Msa0282590 | MtrunA17_Chr2g0286551 | 34.333 | 300 | 185 | 4 | 283 | 580 | 371 | 660 | 2.55e-43 | 164 |
| Msa0282590 | MtrunA17_Chr2g0286551 | 31.016 | 187 | 119 | 3 | 50 | 227 | 9 | 194 | 8.31e-15 | 77.8 |
| Msa0282590 | MtrunA17_Chr3g0102001 | 34.768 | 302 | 187 | 3 | 277 | 571 | 436 | 734 | 5.21e-43 | 164 |
| Msa0282590 | MtrunA17_Chr2g0297531 | 38.916 | 203 | 117 | 3 | 103 | 299 | 1 | 202 | 1.21e-41 | 149 |
| Msa0282590 | MtrunA17_Chr5g0439061 | 36.082 | 291 | 181 | 3 | 283 | 569 | 438 | 727 | 2.94e-41 | 159 |
| Msa0282590 | MtrunA17_Chr2g0284501 | 34.333 | 300 | 187 | 5 | 267 | 565 | 357 | 647 | 7.40e-39 | 151 |
| Msa0282590 | MtrunA17_Chr3g0098531 | 31.183 | 279 | 186 | 4 | 296 | 569 | 3 | 280 | 1.59e-38 | 143 |
| Msa0282590 | MtrunA17_Chr5g0410451 | 45.098 | 153 | 84 | 0 | 378 | 530 | 36 | 188 | 1.51e-37 | 139 |
| Msa0282590 | MtrunA17_Chr5g0410541 | 46.622 | 148 | 78 | 1 | 383 | 530 | 23 | 169 | 4.00e-36 | 134 |
| Msa0282590 | MtrunA17_Chr2g0284541 | 34.859 | 284 | 176 | 5 | 283 | 565 | 354 | 629 | 2.88e-35 | 140 |
| Msa0282590 | MtrunA17_Chr2g0286561 | 36.224 | 196 | 125 | 0 | 373 | 568 | 5 | 200 | 1.31e-34 | 130 |
| Msa0282590 | MtrunA17_Chr3g0098301 | 29.655 | 290 | 197 | 4 | 285 | 568 | 105 | 393 | 2.80e-32 | 129 |
| Msa0282590 | MtrunA17_Chr5g0439081 | 33.171 | 205 | 128 | 3 | 383 | 586 | 15 | 211 | 8.92e-29 | 114 |
| Msa0282590 | MtrunA17_Chr5g0439051 | 40.526 | 190 | 111 | 2 | 383 | 571 | 19 | 207 | 1.16e-28 | 114 |
| Msa0282590 | MtrunA17_Chr5g0410511 | 34.759 | 187 | 115 | 3 | 383 | 562 | 2 | 188 | 1.54e-28 | 113 |
| Msa0282590 | MtrunA17_Chr2g0297611 | 54.945 | 91 | 40 | 1 | 389 | 479 | 1 | 90 | 3.12e-28 | 108 |
| Msa0282590 | MtrunA17_Chr2g0297521 | 61.628 | 86 | 32 | 1 | 375 | 460 | 1 | 85 | 3.63e-28 | 107 |
| Msa0282590 | MtrunA17_Chr2g0297621 | 40.984 | 122 | 69 | 2 | 247 | 365 | 1 | 122 | 4.79e-24 | 97.8 |
| Msa0282590 | MtrunA17_Chr2g0297501 | 41.935 | 93 | 54 | 0 | 103 | 195 | 1 | 93 | 1.06e-22 | 92.8 |
| Msa0282590 | MtrunA17_Chr5g0410181 | 40.299 | 134 | 71 | 3 | 442 | 571 | 2 | 130 | 1.27e-22 | 94.0 |
| Msa0282590 | MtrunA17_Chr1g0211511 | 31.132 | 212 | 138 | 3 | 285 | 493 | 20 | 226 | 1.42e-21 | 96.3 |
| Msa0282590 | MtrunA17_Chr3g0100921 | 33.333 | 132 | 88 | 0 | 431 | 562 | 1 | 132 | 6.65e-15 | 72.0 |
| Msa0282590 | MtrunA17_Chr2g0286571 | 28.636 | 220 | 129 | 5 | 50 | 259 | 9 | 210 | 5.85e-13 | 70.1 |
| Msa0282590 | MtrunA17_Chr3g0100941 | 36.449 | 107 | 68 | 0 | 48 | 154 | 34 | 140 | 4.49e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0282590 | AT3G18670.1 | 32.721 | 544 | 347 | 8 | 57 | 587 | 60 | 597 | 7.34e-92 | 295 |
| Msa0282590 | AT3G18670.2 | 30.988 | 597 | 342 | 11 | 57 | 587 | 60 | 652 | 2.41e-88 | 287 |
| Msa0282590 | AT5G35810.1 | 44.179 | 335 | 181 | 3 | 255 | 583 | 8 | 342 | 8.37e-86 | 271 |
| Msa0282590 | AT5G04700.1 | 31.993 | 547 | 318 | 11 | 79 | 573 | 112 | 656 | 3.53e-69 | 236 |
| Msa0282590 | AT5G04690.1 | 31.660 | 518 | 319 | 10 | 79 | 573 | 107 | 612 | 6.99e-65 | 224 |
| Msa0282590 | AT5G04730.1 | 29.649 | 570 | 342 | 13 | 70 | 583 | 33 | 599 | 2.65e-63 | 219 |
| Msa0282590 | AT5G04690.2 | 29.908 | 545 | 327 | 11 | 79 | 573 | 107 | 646 | 1.68e-61 | 215 |
| Msa0282590 | AT5G04690.3 | 29.705 | 542 | 318 | 11 | 79 | 573 | 107 | 632 | 1.96e-61 | 215 |
| Msa0282590 | AT5G04680.2 | 31.021 | 519 | 299 | 11 | 112 | 573 | 12 | 528 | 8.91e-60 | 208 |
| Msa0282590 | AT5G04680.4 | 30.450 | 555 | 324 | 12 | 79 | 573 | 99 | 651 | 3.41e-59 | 209 |
| Msa0282590 | AT5G04680.3 | 30.127 | 551 | 317 | 11 | 79 | 573 | 99 | 637 | 1.20e-57 | 204 |
| Msa0282590 | AT3G54065.1 | 45.887 | 231 | 119 | 1 | 363 | 587 | 2 | 232 | 2.15e-55 | 187 |
| Msa0282590 | AT5G04680.1 | 35.735 | 347 | 203 | 6 | 238 | 573 | 343 | 680 | 5.07e-51 | 187 |
| Msa0282590 | AT5G35830.1 | 40.994 | 161 | 92 | 2 | 48 | 206 | 89 | 248 | 1.48e-29 | 118 |
| Msa0282590 | AT3G54070.1 | 37.306 | 193 | 113 | 4 | 50 | 235 | 54 | 245 | 5.27e-28 | 113 |
| Msa0282590 | AT5G02620.4 | 24.084 | 573 | 278 | 25 | 37 | 551 | 2 | 475 | 5.07e-11 | 65.9 |
| Msa0282590 | AT5G02620.1 | 24.084 | 573 | 278 | 25 | 37 | 551 | 2 | 475 | 5.07e-11 | 65.9 |
| Msa0282590 | AT5G02620.3 | 24.084 | 573 | 278 | 25 | 37 | 551 | 2 | 475 | 5.07e-11 | 65.9 |
Find 127 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATAGACTCGGGACTTTA+TGG | 0.176518 | 2_3:-18903209 | Msa0282590:intron |
| TCAATTTGATACATGAAATA+AGG | 0.181057 | 2_3:-18902376 | Msa0282590:CDS |
| ATGAATTGTTGCCATCAATT+AGG | 0.186457 | 2_3:-18903358 | Msa0282590:CDS |
| TCGAGTATTTCTTTACATTT+AGG | 0.190510 | 2_3:+18903263 | None:intergenic |
| ATTACAGATGAAAGGTTAAT+TGG | 0.204447 | 2_3:-18906499 | Msa0282590:intron |
| CATTAACATTACCATGAAAT+AGG | 0.220099 | 2_3:+18901417 | None:intergenic |
| TTCACTGACAAGAATGAATT+TGG | 0.225054 | 2_3:-18907357 | Msa0282590:five_prime_UTR |
| GCTGGTTTATCTAAATAATT+AGG | 0.228180 | 2_3:+18901898 | None:intergenic |
| GCTTTGAAAGATTGCATAAA+TGG | 0.257637 | 2_3:-18902353 | Msa0282590:CDS |
| CTGAGTTCCCATAACAAATT+AGG | 0.270857 | 2_3:+18902455 | None:intergenic |
| TGAATTGTTGCCATCAATTA+GGG | 0.271979 | 2_3:-18903357 | Msa0282590:CDS |
| TCCAACTCCAAGTGAAATAA+TGG | 0.294484 | 2_3:+18907404 | None:intergenic |
| TTGCAGAGAAATGGCTTTAG+AGG | 0.299985 | 2_3:-18904593 | Msa0282590:intron |
| CATATTATCATGGTTTGAAA+TGG | 0.303488 | 2_3:-18901672 | Msa0282590:CDS |
| ACATTTGTAGTTCTTTATTT+AGG | 0.305317 | 2_3:-18901555 | Msa0282590:CDS |
| CACTTATCCTAATTTGTTAT+GGG | 0.313348 | 2_3:-18902462 | Msa0282590:CDS |
| GCACTTATCCTAATTTGTTA+TGG | 0.313386 | 2_3:-18902463 | Msa0282590:CDS |
| GCAAGAACAGAAATAAAATT+AGG | 0.316156 | 2_3:+18901646 | None:intergenic |
| TTGCCTTTGAAGTTGATATC+TGG | 0.316818 | 2_3:-18901760 | Msa0282590:CDS |
| ACTAATGGATCGTGATGATT+TGG | 0.321117 | 2_3:-18903468 | Msa0282590:CDS |
| GATTTGCTCCCGCTGCAATA+TGG | 0.321893 | 2_3:+18903519 | None:intergenic |
| TTGCTTCAGCTCAGTTTAGA+AGG | 0.323720 | 2_3:-18904537 | Msa0282590:CDS |
| CTTCACAAAGCAGCACTAAA+AGG | 0.335945 | 2_3:-18903626 | Msa0282590:CDS |
| CCTTGCAGCAGGGTGATTGA+TGG | 0.338093 | 2_3:+18907317 | None:intergenic |
| CATGCAGAATTGCTTCAAAA+AGG | 0.338739 | 2_3:-18902039 | Msa0282590:CDS |
| CAACTCTATGCAATGGTTGC+TGG | 0.340691 | 2_3:+18904557 | None:intergenic |
| CAGGAAAGAGAGAAGACTTT+TGG | 0.346854 | 2_3:+18907438 | None:intergenic |
| CAATTTGATACATGAAATAA+GGG | 0.346894 | 2_3:-18902375 | Msa0282590:CDS |
| TAATTGGAGTGGACCACTTT+TGG | 0.350804 | 2_3:-18906483 | Msa0282590:five_prime_UTR |
| CAATGGTTGCTGGCTAGATT+TGG | 0.352758 | 2_3:+18904567 | None:intergenic |
| TGTTCACTTTGTGGAGGAAT+TGG | 0.355332 | 2_3:-18903495 | Msa0282590:CDS |
| GAAGGGGAACACATTGGTTT+AGG | 0.361388 | 2_3:+18903645 | None:intergenic |
| CTTTGCTTTGCTGCAGCGGT+TGG | 0.373249 | 2_3:-18903416 | Msa0282590:CDS |
| AGGTGTTACTCCTCTTTACT+TGG | 0.381248 | 2_3:-18903327 | Msa0282590:CDS |
| TTGTTTCCTTTGCAGAGAAA+TGG | 0.387889 | 2_3:-18904602 | Msa0282590:intron |
| GGAGGAATTGGTAAAACTAA+TGG | 0.390049 | 2_3:-18903483 | Msa0282590:CDS |
| AAGGCATTGCGCCTATTTCA+TGG | 0.394651 | 2_3:-18901428 | Msa0282590:three_prime_UTR |
| TTAAGCTTATACGACGCATC+TGG | 0.395130 | 2_3:-18902601 | Msa0282590:CDS |
| GTTTGTGGTTGTCAAAGTCT+TGG | 0.400481 | 2_3:-18902939 | Msa0282590:CDS |
| TGAGACGGGTTTACATCTAT+TGG | 0.400693 | 2_3:-18902976 | Msa0282590:CDS |
| GGTTGCCCAGCCATTTGTTA+TGG | 0.404362 | 2_3:+18903547 | None:intergenic |
| TTTGTGGTTGTCAAAGTCTT+GGG | 0.416618 | 2_3:-18902938 | Msa0282590:CDS |
| GCTCGAAAACATTCGGTTTG+TGG | 0.422912 | 2_3:-18902954 | Msa0282590:CDS |
| CCTAGTCCACCCCTAATTGA+TGG | 0.425519 | 2_3:+18903347 | None:intergenic |
| TGTTCAACTTGCTGAGATAA+TGG | 0.428263 | 2_3:-18903390 | Msa0282590:CDS |
| TGGCAGAAATCAGCAATGTT+TGG | 0.432764 | 2_3:+18903567 | None:intergenic |
| CCATCAATTAGGGGTGGACT+AGG | 0.433460 | 2_3:-18903347 | Msa0282590:CDS |
| AAATGATGCTCGAATTATCA+TGG | 0.437423 | 2_3:-18902238 | Msa0282590:CDS |
| ATATTATCATGGTTTGAAAT+GGG | 0.443778 | 2_3:-18901671 | Msa0282590:CDS |
| TGCTCTTTGCTTTGCTGCAG+CGG | 0.445188 | 2_3:-18903420 | Msa0282590:CDS |
| ACAATTATCGCCGCAGAAGT+TGG | 0.445753 | 2_3:-18902515 | Msa0282590:CDS |
| CTAAAAGGTGATTGGAAAGA+AGG | 0.452948 | 2_3:-18903611 | Msa0282590:CDS |
| TCTATTGGCTCGAAAACATT+CGG | 0.454999 | 2_3:-18902961 | Msa0282590:CDS |
| GCGATAATTGTTACTTGAGA+TGG | 0.457167 | 2_3:+18902527 | None:intergenic |
| TTCTACATAACATATTATCA+TGG | 0.459801 | 2_3:-18901682 | Msa0282590:CDS |
| AAGCAGCACTAAAAGGTGAT+TGG | 0.463773 | 2_3:-18903619 | Msa0282590:CDS |
| GTTTCGACTCTCATAGCTAC+AGG | 0.467654 | 2_3:-18901976 | Msa0282590:CDS |
| CTGATTTCTGCCATAACAAA+TGG | 0.468918 | 2_3:-18903557 | Msa0282590:CDS |
| GAGACTATATTGAGCCGATC+AGG | 0.472006 | 2_3:+18902275 | None:intergenic |
| TCAGAAATTCTCCTTGCAGC+AGG | 0.478428 | 2_3:+18907306 | None:intergenic |
| CCCATTATTTCACTTGGAGT+TGG | 0.478618 | 2_3:-18907405 | Msa0282590:five_prime_UTR |
| GCAAACAGCGAATTCTTGTA+TGG | 0.482111 | 2_3:-18902001 | Msa0282590:CDS |
| CCTTGAGTCTCAACCAAAAG+TGG | 0.485968 | 2_3:+18906470 | None:intergenic |
| TCTAGATGACTCAGAGATGA+TGG | 0.487397 | 2_3:-18902564 | Msa0282590:CDS |
| CAATGTTAGCACCGCCTGAT+CGG | 0.494071 | 2_3:-18902289 | Msa0282590:CDS |
| TCAGCTGCATTTAGCTTACC+AGG | 0.494468 | 2_3:-18901946 | Msa0282590:CDS |
| GCTCCGCATATCGCGAGATA+AGG | 0.498008 | 2_3:+18901800 | None:intergenic |
| TTTCTGCCATAACAAATGGC+TGG | 0.499899 | 2_3:-18903553 | Msa0282590:CDS |
| AGCAAATCATGTTCACTTTG+TGG | 0.500460 | 2_3:-18903504 | Msa0282590:CDS |
| AAAGCAAATACGAGGAATGC+TGG | 0.502490 | 2_3:+18901880 | None:intergenic |
| ACCGCACTCCATATTGCAGC+GGG | 0.502589 | 2_3:-18903527 | Msa0282590:CDS |
| CCAACTCCAAGTGAAATAAT+GGG | 0.506075 | 2_3:+18907405 | None:intergenic |
| GCTCGAATTATCATGGTTTG+AGG | 0.512843 | 2_3:-18902231 | Msa0282590:intron |
| AAATAAAGAACTACAAATGT+AGG | 0.513663 | 2_3:+18901558 | None:intergenic |
| TACATTACATTACAGATGAA+AGG | 0.514984 | 2_3:-18906507 | Msa0282590:intron |
| TGTAAAGCAGCCAAGTAAAG+AGG | 0.523502 | 2_3:+18903317 | None:intergenic |
| TTCTGCCATAACAAATGGCT+GGG | 0.532460 | 2_3:-18903552 | Msa0282590:CDS |
| TAGTCACCCATTATTTCACT+TGG | 0.535401 | 2_3:-18907411 | Msa0282590:five_prime_UTR |
| TTGGAATTGCAAGATTACTC+AGG | 0.541103 | 2_3:-18903449 | Msa0282590:CDS |
| ATTTGCTTTATCCGACTCCA+TGG | 0.541197 | 2_3:-18901866 | Msa0282590:CDS |
| GTGTTATCATTGTTTCCACC+TGG | 0.542558 | 2_3:+18901928 | None:intergenic |
| TTTAGTGCTGCTTTGTGAAG+GGG | 0.544540 | 2_3:+18903629 | None:intergenic |
| CTTTGTGAAGGGGAACACAT+TGG | 0.546773 | 2_3:+18903639 | None:intergenic |
| TGATCGGCTCAATATAGTCT+CGG | 0.546856 | 2_3:-18902273 | Msa0282590:CDS |
| AATAATGGGTGACTATGTAC+AGG | 0.551332 | 2_3:+18907419 | None:intergenic |
| AGATGAAAGGTTAATTGGAG+TGG | 0.553861 | 2_3:-18906494 | Msa0282590:five_prime_UTR |
| GATCGGCTCAATATAGTCTC+GGG | 0.558296 | 2_3:-18902272 | Msa0282590:CDS |
| CTCAAAATTTCCAACTTCTG+CGG | 0.567720 | 2_3:+18902505 | None:intergenic |
| GCTTACTAGTAGAAACTAAG+TGG | 0.569804 | 2_3:+18904506 | None:intergenic |
| AAATACTCGAGGAAAACGAT+TGG | 0.569851 | 2_3:-18903250 | Msa0282590:CDS |
| TAGCGAATCATACGTTTACT+CGG | 0.572760 | 2_3:+18901532 | None:intergenic |
| CAGAAATTCTCCTTGCAGCA+GGG | 0.573958 | 2_3:+18907307 | None:intergenic |
| CGTCGTATAAGCTTAAGCAT+TGG | 0.578723 | 2_3:+18902608 | None:intergenic |
| AGTCCAGATATCAACTTCAA+AGG | 0.581187 | 2_3:+18901757 | None:intergenic |
| CGAGATAAGTGCCATGGAGT+CGG | 0.585094 | 2_3:+18901855 | None:intergenic |
| CGCATATCGCGAGATAAGGA+TGG | 0.586729 | 2_3:+18901804 | None:intergenic |
| ATGTGAACTTACATAAATGC+AGG | 0.587039 | 2_3:+18902901 | None:intergenic |
| GTTCCTCACTTGTATAGACT+CGG | 0.588161 | 2_3:-18903219 | Msa0282590:CDS |
| CCATCAATCACCCTGCTGCA+AGG | 0.589924 | 2_3:-18907317 | Msa0282590:five_prime_UTR |
| CAGAGGTGATAGCAATGAGA+CGG | 0.590005 | 2_3:-18902991 | Msa0282590:CDS |
| CATCCTTATCTCGCGATATG+CGG | 0.590914 | 2_3:-18901803 | Msa0282590:CDS |
| GTTATGGGAACTCAGTAACA+AGG | 0.591126 | 2_3:-18902447 | Msa0282590:CDS |
| AAGCAAACAGTGAGATGGCA+TGG | 0.593244 | 2_3:-18903295 | Msa0282590:CDS |
| AGACATATAAACAACGGTAT+CGG | 0.594156 | 2_3:+18901616 | None:intergenic |
| TAAGCTTATACGACGCATCT+GGG | 0.601299 | 2_3:-18902600 | Msa0282590:CDS |
| AGAGGTGATAGCAATGAGAC+GGG | 0.605627 | 2_3:-18902990 | Msa0282590:CDS |
| TCAAATTGAAGATACTAGCA+TGG | 0.613242 | 2_3:+18902390 | None:intergenic |
| GAAGTTGATATCTGGACTAG+TGG | 0.614237 | 2_3:-18901752 | Msa0282590:CDS |
| TGAAGACGAGATAAGTGCCA+TGG | 0.615834 | 2_3:+18901849 | None:intergenic |
| TTGTTGCCATCAATTAGGGG+TGG | 0.620541 | 2_3:-18903353 | Msa0282590:CDS |
| AAATCATGTTCACTTTGTGG+AGG | 0.623673 | 2_3:-18903501 | Msa0282590:CDS |
| AACCGCACTCCATATTGCAG+CGG | 0.625156 | 2_3:-18903528 | Msa0282590:CDS |
| ACTATATTGAGCCGATCAGG+CGG | 0.628275 | 2_3:+18902278 | None:intergenic |
| GTAGAAACTAAGTGGATGAG+AGG | 0.636695 | 2_3:+18904514 | None:intergenic |
| TTCCTCACTTGTATAGACTC+GGG | 0.637197 | 2_3:-18903218 | Msa0282590:CDS |
| TTTACAAGCAAACAGTGAGA+TGG | 0.653503 | 2_3:-18903300 | Msa0282590:CDS |
| TTATGGGAACTCAGTAACAA+GGG | 0.656955 | 2_3:-18902446 | Msa0282590:CDS |
| GAATTGTTGCCATCAATTAG+GGG | 0.658510 | 2_3:-18903356 | Msa0282590:CDS |
| AACTGTAGACATATAAACAA+CGG | 0.659566 | 2_3:+18901610 | None:intergenic |
| GTCCCGAGTCTATACAAGTG+AGG | 0.666679 | 2_3:+18903216 | None:intergenic |
| GCTGAAGCAACTCTATGCAA+TGG | 0.680846 | 2_3:+18904550 | None:intergenic |
| GCTGCATTTAGCTTACCAGG+TGG | 0.684232 | 2_3:-18901943 | Msa0282590:CDS |
| TAAATGTAAAGAAATACTCG+AGG | 0.687289 | 2_3:-18903261 | Msa0282590:CDS |
| TCTTTCGTAAATAGTTCGCG+AGG | 0.694354 | 2_3:+18902063 | None:intergenic |
| TCCCGCTGCAATATGGAGTG+CGG | 0.708642 | 2_3:+18903526 | None:intergenic |
| AGTCGGATAAAGCAAATACG+AGG | 0.727881 | 2_3:+18901872 | None:intergenic |
| AATTGAAGATACTAGCATGG+CGG | 0.757307 | 2_3:+18902393 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAATATATTTTTTTAA+TGG | + | chr2_3:18902077-18902096 | None:intergenic | 0.0% |
| !!! | AATATATTTTTTTAATGGTT+TGG | + | chr2_3:18902072-18902091 | None:intergenic | 10.0% |
| !!! | AATATATTATATTCCTTTTT+TGG | - | chr2_3:18902084-18902103 | Msa0282590:CDS | 10.0% |
| !! | ATAATAAAAGATAATGAAAA+TGG | + | chr2_3:18902465-18902484 | None:intergenic | 10.0% |
| !!! | TATTTGTATAGTATATTTTT+TGG | + | chr2_3:18902529-18902548 | None:intergenic | 10.0% |
| !! | AAATATCATGATAATAAATA+AGG | + | chr2_3:18903026-18903045 | None:intergenic | 10.0% |
| !!! | AGTTATGTTTTATTTTTAAA+TGG | - | chr2_3:18903928-18903947 | Msa0282590:intron | 10.0% |
| !!! | TTAATTGCAAAATTTTTTAA+GGG | + | chr2_3:18904020-18904039 | None:intergenic | 10.0% |
| !!! | ATTAATTGCAAAATTTTTTA+AGG | + | chr2_3:18904021-18904040 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTAAAGATAC+TGG | - | chr2_3:18904188-18904207 | Msa0282590:intron | 10.0% |
| !!! | TTTATTTTTCTGATATAAAA+TGG | - | chr2_3:18904420-18904439 | Msa0282590:intron | 10.0% |
| !!! | ATTATATTTTTTAATTCATG+TGG | + | chr2_3:18906020-18906039 | None:intergenic | 10.0% |
| !!! | TTTCTTTTTCTTCATTTTTT+TGG | - | chr2_3:18902018-18902037 | Msa0282590:CDS | 15.0% |
| !!! | TTCTTTTTCTTCATTTTTTT+GGG | - | chr2_3:18902019-18902038 | Msa0282590:CDS | 15.0% |
| !!! | ATTATCTTTTATTATAACAC+TGG | - | chr2_3:18902470-18902489 | Msa0282590:CDS | 15.0% |
| !! | TTACTCTCATAATTAATTAA+AGG | + | chr2_3:18903273-18903292 | None:intergenic | 15.0% |
| !!! | TAAAATATTTTCAGTCTAAT+GGG | - | chr2_3:18903490-18903509 | Msa0282590:CDS | 15.0% |
| !! | TATTATAAACTACAATATTG+TGG | + | chr2_3:18903699-18903718 | None:intergenic | 15.0% |
| !!! | CAAGAGAATTTTTTTTTATA+AGG | - | chr2_3:18903800-18903819 | Msa0282590:intron | 15.0% |
| !!! | AGATATGTTTTGTTTTATTA+AGG | - | chr2_3:18903904-18903923 | Msa0282590:intron | 15.0% |
| !!! | GATATGTTTTGTTTTATTAA+GGG | - | chr2_3:18903905-18903924 | Msa0282590:intron | 15.0% |
| !!! | TAATTGCAAAATTTTTTAAG+GGG | + | chr2_3:18904019-18904038 | None:intergenic | 15.0% |
| !!! | TTTTAACTTACAATGAAAAT+AGG | - | chr2_3:18904069-18904088 | Msa0282590:intron | 15.0% |
| !! | TTACATTAATCTAGAAAAAA+AGG | - | chr2_3:18904461-18904480 | Msa0282590:intron | 15.0% |
| !! | TGAAAATATTTAATATCTTC+GGG | + | chr2_3:18904488-18904507 | None:intergenic | 15.0% |
| !! | CTGAAAATATTTAATATCTT+CGG | + | chr2_3:18904489-18904508 | None:intergenic | 15.0% |
| !!! | AAGATATTAAATATTTTCAG+TGG | - | chr2_3:18904489-18904508 | Msa0282590:intron | 15.0% |
| !!! | TTATTTTCTACATACTAAAT+TGG | + | chr2_3:18904822-18904841 | None:intergenic | 15.0% |
| !! | AATTTAGTATGTAGAAAATA+AGG | - | chr2_3:18904821-18904840 | Msa0282590:intron | 15.0% |
| !! | ATTTAGTATGTAGAAAATAA+GGG | - | chr2_3:18904822-18904841 | Msa0282590:intron | 15.0% |
| !! | AAATATTATCCAACATAATT+TGG | - | chr2_3:18905752-18905771 | Msa0282590:intron | 15.0% |
| !! | GTAATATTAATTAAACATTC+AGG | - | chr2_3:18906185-18906204 | Msa0282590:intron | 15.0% |
| !!! | TCTAATTGTTTTTAAATCTA+AGG | - | chr2_3:18907382-18907401 | Msa0282590:five_prime_UTR | 15.0% |
| !! | ACATAAATTCCTACTAAATA+TGG | + | chr2_3:18901963-18901982 | None:intergenic | 20.0% |
| !! | GAATTTATGTTATGAATGAT+TGG | - | chr2_3:18901973-18901992 | Msa0282590:CDS | 20.0% |
| !! | TAAATGTAGAAACTTAATCT+TGG | - | chr2_3:18903181-18903200 | Msa0282590:intron | 20.0% |
| !!! | CTAAAATATTTTCAGTCTAA+TGG | - | chr2_3:18903489-18903508 | Msa0282590:CDS | 20.0% |
| !!! | GAGTTTGTTTGAAAATTAAA+TGG | - | chr2_3:18903656-18903675 | Msa0282590:CDS | 20.0% |
| !! | TTATTAACCATCGTAAAATT+AGG | + | chr2_3:18903859-18903878 | None:intergenic | 20.0% |
| !! | TCAATTATGCTAATAAATGA+TGG | - | chr2_3:18904040-18904059 | Msa0282590:intron | 20.0% |
| !! | CAATTATGCTAATAAATGAT+GGG | - | chr2_3:18904041-18904060 | Msa0282590:intron | 20.0% |
| !! | TATTAAACTTGACTAATTAC+TGG | - | chr2_3:18904159-18904178 | Msa0282590:intron | 20.0% |
| !!! | TATTTGGCTAGATTTTAAAA+CGG | + | chr2_3:18904356-18904375 | None:intergenic | 20.0% |
| !! | GAAAATATTTAATATCTTCG+GGG | + | chr2_3:18904487-18904506 | None:intergenic | 20.0% |
| !! | AATATGTGTTAAACTTGAAA+TGG | - | chr2_3:18904628-18904647 | Msa0282590:intron | 20.0% |
| !! | ATATGTGTTAAACTTGAAAT+GGG | - | chr2_3:18904629-18904648 | Msa0282590:intron | 20.0% |
| !!! | TTTTTTTCAAGAAATCATCT+TGG | + | chr2_3:18904658-18904677 | None:intergenic | 20.0% |
| !! | GATGATTTCTTGAAAAAAAT+AGG | - | chr2_3:18904659-18904678 | Msa0282590:intron | 20.0% |
| !! | TCAATTTGATACATGAAATA+AGG | - | chr2_3:18906453-18906472 | Msa0282590:exon | 20.0% |
| !! | CAATTTGATACATGAAATAA+GGG | - | chr2_3:18906454-18906473 | Msa0282590:exon | 20.0% |
| !!! | TTTTTCATTTCAATCATATG+TGG | + | chr2_3:18906730-18906749 | None:intergenic | 20.0% |
| !! | ATTGAAATGAAAAATTCTGA+AGG | - | chr2_3:18906736-18906755 | Msa0282590:intron | 20.0% |
| !! | TTCTACATAACATATTATCA+TGG | - | chr2_3:18907147-18907166 | Msa0282590:intron | 20.0% |
| !!! | ATATTATCATGGTTTGAAAT+GGG | - | chr2_3:18907158-18907177 | Msa0282590:intron | 20.0% |
| !! | AAATAAAGAACTACAAATGT+AGG | + | chr2_3:18907274-18907293 | None:intergenic | 20.0% |
| !!! | ACATTTGTAGTTCTTTATTT+AGG | - | chr2_3:18907274-18907293 | Msa0282590:intron | 20.0% |
| ! | AAACTTTATGCTGAAAATAG+AGG | - | chr2_3:18901870-18901889 | Msa0282590:CDS | 25.0% |
| ! | AGATCTTATCCATATTTAGT+AGG | - | chr2_3:18901951-18901970 | Msa0282590:CDS | 25.0% |
| ! | ATAAAAAACTCTGCCAAAAA+AGG | + | chr2_3:18902100-18902119 | None:intergenic | 25.0% |
| ! | TACATTACATTACAGATGAA+AGG | - | chr2_3:18902322-18902341 | Msa0282590:CDS | 25.0% |
| ! | ATTACAGATGAAAGGTTAAT+TGG | - | chr2_3:18902330-18902349 | Msa0282590:CDS | 25.0% |
| ! | TATGTAAGTATGCGAATTAT+TGG | - | chr2_3:18902405-18902424 | Msa0282590:CDS | 25.0% |
| ! | GGACAAAAGTAATATTAAAG+TGG | + | chr2_3:18902508-18902527 | None:intergenic | 25.0% |
| ! | ACTATACTCAAGTTATTGTA+CGG | - | chr2_3:18902639-18902658 | Msa0282590:intron | 25.0% |
| ! | ACTCATGATACAAATTACAA+AGG | + | chr2_3:18902959-18902978 | None:intergenic | 25.0% |
| ! | TTTGTATCATGAGTATATGT+TGG | - | chr2_3:18902965-18902984 | Msa0282590:CDS | 25.0% |
| ! | TTGTATCATGAGTATATGTT+GGG | - | chr2_3:18902966-18902985 | Msa0282590:CDS | 25.0% |
| ! | TAAGAGATATGAAATACTAC+AGG | + | chr2_3:18903429-18903448 | None:intergenic | 25.0% |
| ! | TATAAACTACAATATTGTGG+AGG | + | chr2_3:18903696-18903715 | None:intergenic | 25.0% |
| ! | TAGTCTCTATGAAATAGAAA+TGG | - | chr2_3:18903771-18903790 | Msa0282590:intron | 25.0% |
| !! | ACTTTAACCTAATTTTACGA+TGG | - | chr2_3:18903849-18903868 | Msa0282590:intron | 25.0% |
| !!! | ATTTGGCTAGATTTTAAAAC+GGG | + | chr2_3:18904355-18904374 | None:intergenic | 25.0% |
| ! | ACTCTGTATGAGAAAATATT+TGG | + | chr2_3:18904372-18904391 | None:intergenic | 25.0% |
| ! | TTTCTTGAAAAAAATAGGCT+AGG | - | chr2_3:18904664-18904683 | Msa0282590:intron | 25.0% |
| ! | GATGCTTATACTATACAATT+TGG | + | chr2_3:18904695-18904714 | None:intergenic | 25.0% |
| !! | ATCTTAAAGATGATTTTGTG+AGG | + | chr2_3:18904740-18904759 | None:intergenic | 25.0% |
| ! | TAGAATCCATCTAACTATAT+CGG | + | chr2_3:18904859-18904878 | None:intergenic | 25.0% |
| ! | TCGAGTATTTCTTTACATTT+AGG | + | chr2_3:18905569-18905588 | None:intergenic | 25.0% |
| ! | TAAATGTAAAGAAATACTCG+AGG | - | chr2_3:18905568-18905587 | Msa0282590:intron | 25.0% |
| ! | CCATAATATCCAAATTATGT+TGG | + | chr2_3:18905764-18905783 | None:intergenic | 25.0% |
| ! | CCAACATAATTTGGATATTA+TGG | - | chr2_3:18905761-18905780 | Msa0282590:intron | 25.0% |
| ! | ATCTCATCTGTCAATATATT+AGG | + | chr2_3:18906105-18906124 | None:intergenic | 25.0% |
| !!! | CACTTATCCTAATTTGTTAT+GGG | - | chr2_3:18906367-18906386 | Msa0282590:intron | 25.0% |
| !! | GCTGGTTTATCTAAATAATT+AGG | + | chr2_3:18906934-18906953 | None:intergenic | 25.0% |
| ! | CATATTATCATGGTTTGAAA+TGG | - | chr2_3:18907157-18907176 | Msa0282590:intron | 25.0% |
| ! | GCAAGAACAGAAATAAAATT+AGG | + | chr2_3:18907186-18907205 | None:intergenic | 25.0% |
| ! | AACTGTAGACATATAAACAA+CGG | + | chr2_3:18907222-18907241 | None:intergenic | 25.0% |
| ! | CATTAACATTACCATGAAAT+AGG | + | chr2_3:18907415-18907434 | None:intergenic | 25.0% |
| TTCACTGACAAGAATGAATT+TGG | - | chr2_3:18901472-18901491 | Msa0282590:three_prime_UTR | 30.0% | |
| ! | TCTGAGCTAATTTTATGTTC+AGG | - | chr2_3:18901541-18901560 | Msa0282590:CDS | 30.0% |
| ! | TGTTTTGTGAAGAATCTTGT+TGG | - | chr2_3:18901643-18901662 | Msa0282590:CDS | 30.0% |
| AATAGAAGATCCCTTTACTT+TGG | + | chr2_3:18901676-18901695 | None:intergenic | 30.0% | |
| !! | TGTTATGAATGATTGGTTTC+AGG | - | chr2_3:18901980-18901999 | Msa0282590:CDS | 30.0% |
| ! | GGTTTGGAGTTTACAATTAA+AGG | + | chr2_3:18902056-18902075 | None:intergenic | 30.0% |
| GAATATTCTATGGCTCTTAT+TGG | - | chr2_3:18902225-18902244 | Msa0282590:intron | 30.0% | |
| GTTGTGACTTATTATCATCA+TGG | + | chr2_3:18902267-18902286 | None:intergenic | 30.0% | |
| ATAAGTCACAACTAACCATT+TGG | - | chr2_3:18902275-18902294 | Msa0282590:CDS | 30.0% | |
| ATAAATAAGTGTCCACCAAA+TGG | + | chr2_3:18902293-18902312 | None:intergenic | 30.0% | |
| TCTAAAAGTAAATTCTGCAG+TGG | + | chr2_3:18902442-18902461 | None:intergenic | 30.0% | |
| ! | AAGTTATTGTACGGATGTTT+TGG | - | chr2_3:18902648-18902667 | Msa0282590:intron | 30.0% |
| GGGTTAGAAATTATCTTGAT+AGG | - | chr2_3:18902986-18903005 | Msa0282590:CDS | 30.0% | |
| !! | TCTTGTTAACTTGTACCTTT+AGG | - | chr2_3:18903142-18903161 | Msa0282590:intron | 30.0% |
| !! | CTTGTTAACTTGTACCTTTA+GGG | - | chr2_3:18903143-18903162 | Msa0282590:intron | 30.0% |
| !!! | TTTTTTATCTTGTGCCCTAA+AGG | + | chr2_3:18903160-18903179 | None:intergenic | 30.0% |
| ! | AATGCTAACTTGTGTCTTAA+GGG | + | chr2_3:18903248-18903267 | None:intergenic | 30.0% |
| ! | AAATGCTAACTTGTGTCTTA+AGG | + | chr2_3:18903249-18903268 | None:intergenic | 30.0% |
| AACATGATAAGATATGAAGC+TGG | + | chr2_3:18903379-18903398 | None:intergenic | 30.0% | |
| ! | AAGTGATTTGCCTTATATCT+CGG | - | chr2_3:18903461-18903480 | Msa0282590:CDS | 30.0% |
| !! | TTTAGAAGTACCGAGATATA+AGG | + | chr2_3:18903474-18903493 | None:intergenic | 30.0% |
| TCAAACAAACTCAAAATTCG+AGG | + | chr2_3:18903648-18903667 | None:intergenic | 30.0% | |
| TTGTAAGAATCCAAAAAACC+AGG | - | chr2_3:18904102-18904121 | Msa0282590:intron | 30.0% | |
| TGTAAGAATCCAAAAAACCA+GGG | - | chr2_3:18904103-18904122 | Msa0282590:intron | 30.0% | |
| !!! | CTTATTTATCCCTGGTTTTT+TGG | + | chr2_3:18904115-18904134 | None:intergenic | 30.0% |
| ! | AACATCTTCTTATTTATCCC+TGG | + | chr2_3:18904123-18904142 | None:intergenic | 30.0% |
| TTGCGTTATAAGTGACTTTA+TGG | - | chr2_3:18904605-18904624 | Msa0282590:intron | 30.0% | |
| !! | TTTCCTTTTAAAGAGTCTAC+CGG | - | chr2_3:18904888-18904907 | Msa0282590:intron | 30.0% |
| ATAGAATGTGTGAATTTCAC+CGG | + | chr2_3:18904910-18904929 | None:intergenic | 30.0% | |
| TATTCGATATATTTAGACGC+AGG | + | chr2_3:18904964-18904983 | None:intergenic | 30.0% | |
| TTCTATAAGTACGACTCAAA+TGG | + | chr2_3:18905003-18905022 | None:intergenic | 30.0% | |
| TCTGCAATGAAATTGATCAA+GGG | + | chr2_3:18905146-18905165 | None:intergenic | 30.0% | |
| TTGCAGAGGAACATAAAAAA+AGG | - | chr2_3:18905159-18905178 | Msa0282590:intron | 30.0% | |
| ATGAATTGTTGCCATCAATT+AGG | - | chr2_3:18905471-18905490 | Msa0282590:intron | 30.0% | |
| TGAATTGTTGCCATCAATTA+GGG | - | chr2_3:18905472-18905491 | Msa0282590:intron | 30.0% | |
| CTACTCTCTCTCAAATATAT+TGG | + | chr2_3:18905731-18905750 | None:intergenic | 30.0% | |
| ATGTGAACTTACATAAATGC+AGG | + | chr2_3:18905931-18905950 | None:intergenic | 30.0% | |
| !! | ATACCTCACTTTAAAACAGA+TGG | + | chr2_3:18905983-18906002 | None:intergenic | 30.0% |
| !! | GCACTTATCCTAATTTGTTA+TGG | - | chr2_3:18906366-18906385 | Msa0282590:intron | 30.0% |
| TCAAATTGAAGATACTAGCA+TGG | + | chr2_3:18906442-18906461 | None:intergenic | 30.0% | |
| !! | GCTTTGAAAGATTGCATAAA+TGG | - | chr2_3:18906476-18906495 | Msa0282590:five_prime_UTR | 30.0% |
| ! | AGATTGCATAAATGGTTTTC+TGG | - | chr2_3:18906484-18906503 | Msa0282590:five_prime_UTR | 30.0% |
| ! | ATAAATGGTTTTCTGGATGA+TGG | - | chr2_3:18906491-18906510 | Msa0282590:five_prime_UTR | 30.0% |
| AAATGATGCTCGAATTATCA+TGG | - | chr2_3:18906591-18906610 | Msa0282590:intron | 30.0% | |
| !! | ACATATGTCATTGATTTCAC+AGG | - | chr2_3:18906684-18906703 | Msa0282590:intron | 30.0% |
| AGACATATAAACAACGGTAT+CGG | + | chr2_3:18907216-18907235 | None:intergenic | 30.0% | |
| ! | TATGTCTACAGTTTTCTCTA+TGG | - | chr2_3:18907229-18907248 | Msa0282590:intron | 30.0% |
| !! | AATAATGGGTGACTATGTAC+AGG | + | chr2_3:18901413-18901432 | None:intergenic | 35.0% |
| TAGTCACCCATTATTTCACT+TGG | - | chr2_3:18901418-18901437 | Msa0282590:three_prime_UTR | 35.0% | |
| CCAACTCCAAGTGAAATAAT+GGG | + | chr2_3:18901427-18901446 | None:intergenic | 35.0% | |
| TCCAACTCCAAGTGAAATAA+TGG | + | chr2_3:18901428-18901447 | None:intergenic | 35.0% | |
| CTATATATTAGCCAGATGAC+TGG | + | chr2_3:18901761-18901780 | None:intergenic | 35.0% | |
| !! | AATCACGTGCTTTTGAGAAA+GGG | + | chr2_3:18902205-18902224 | None:intergenic | 35.0% |
| GCACGTGATTGAATATTCTA+TGG | - | chr2_3:18902215-18902234 | Msa0282590:intron | 35.0% | |
| AGATGAAAGGTTAATTGGAG+TGG | - | chr2_3:18902335-18902354 | Msa0282590:CDS | 35.0% | |
| TTAGACTTTAGTGACTCATG+AGG | + | chr2_3:18902607-18902626 | None:intergenic | 35.0% | |
| ! | CACAAGTTGAGCTAAAAAGT+GGG | + | chr2_3:18902685-18902704 | None:intergenic | 35.0% |
| ! | TCACAAGTTGAGCTAAAAAG+TGG | + | chr2_3:18902686-18902705 | None:intergenic | 35.0% |
| AATACTACAGGTCTGTTTGA+TGG | + | chr2_3:18903417-18903436 | None:intergenic | 35.0% | |
| TTGTTTCCTTTGCAGAGAAA+TGG | - | chr2_3:18904227-18904246 | Msa0282590:intron | 35.0% | |
| GCTTACTAGTAGAAACTAAG+TGG | + | chr2_3:18904326-18904345 | None:intergenic | 35.0% | |
| ! | CATACAGAGTGCAACTTTTT+CGG | - | chr2_3:18904382-18904401 | Msa0282590:intron | 35.0% |
| AGTACGACTCAAATGGTAAA+AGG | + | chr2_3:18904996-18905015 | None:intergenic | 35.0% | |
| CTCTGCAATGAAATTGATCA+AGG | + | chr2_3:18905147-18905166 | None:intergenic | 35.0% | |
| CTTGATCAATTTCATTGCAG+AGG | - | chr2_3:18905145-18905164 | Msa0282590:intron | 35.0% | |
| !!! | TTTTAGTGCTGCTTTGTGAA+GGG | + | chr2_3:18905204-18905223 | None:intergenic | 35.0% |
| CTAAAAGGTGATTGGAAAGA+AGG | - | chr2_3:18905218-18905237 | Msa0282590:intron | 35.0% | |
| CTGATTTCTGCCATAACAAA+TGG | - | chr2_3:18905272-18905291 | Msa0282590:intron | 35.0% | |
| AGCAAATCATGTTCACTTTG+TGG | - | chr2_3:18905325-18905344 | Msa0282590:intron | 35.0% | |
| AAATCATGTTCACTTTGTGG+AGG | - | chr2_3:18905328-18905347 | Msa0282590:intron | 35.0% | |
| GGAGGAATTGGTAAAACTAA+TGG | - | chr2_3:18905346-18905365 | Msa0282590:intron | 35.0% | |
| ! | ACTAATGGATCGTGATGATT+TGG | - | chr2_3:18905361-18905380 | Msa0282590:intron | 35.0% |
| TTGGAATTGCAAGATTACTC+AGG | - | chr2_3:18905380-18905399 | Msa0282590:intron | 35.0% | |
| !! | TGTTCAACTTGCTGAGATAA+TGG | - | chr2_3:18905439-18905458 | Msa0282590:intron | 35.0% |
| GAATTGTTGCCATCAATTAG+GGG | - | chr2_3:18905473-18905492 | Msa0282590:intron | 35.0% | |
| TTTACAAGCAAACAGTGAGA+TGG | - | chr2_3:18905529-18905548 | Msa0282590:intron | 35.0% | |
| AAATACTCGAGGAAAACGAT+TGG | - | chr2_3:18905579-18905598 | Msa0282590:intron | 35.0% | |
| AGTAGCATTTCAAGAACTAG+TGG | + | chr2_3:18905659-18905678 | None:intergenic | 35.0% | |
| !! | TCTATTGGCTCGAAAACATT+CGG | - | chr2_3:18905868-18905887 | Msa0282590:intron | 35.0% |
| TTTGTGGTTGTCAAAGTCTT+GGG | - | chr2_3:18905891-18905910 | Msa0282590:intron | 35.0% | |
| !!! | TCTCCATCTGTTTTAAAGTG+AGG | - | chr2_3:18905977-18905996 | Msa0282590:intron | 35.0% |
| ! | GCGATAATTGTTACTTGAGA+TGG | + | chr2_3:18906305-18906324 | None:intergenic | 35.0% |
| CTCAAAATTTCCAACTTCTG+CGG | + | chr2_3:18906327-18906346 | None:intergenic | 35.0% | |
| AATTGAAGATACTAGCATGG+CGG | + | chr2_3:18906439-18906458 | None:intergenic | 35.0% | |
| !! | TATGTCATTGATTTCACAGG+AGG | - | chr2_3:18906687-18906706 | Msa0282590:intron | 35.0% |
| CATGCAGAATTGCTTCAAAA+AGG | - | chr2_3:18906790-18906809 | Msa0282590:intron | 35.0% | |
| TGCTTCAAAAAGGAGAATCA+TGG | - | chr2_3:18906800-18906819 | Msa0282590:intron | 35.0% | |
| !! | TTGCCTTTGAAGTTGATATC+TGG | - | chr2_3:18907069-18907088 | Msa0282590:intron | 35.0% |
| AGTCCAGATATCAACTTCAA+AGG | + | chr2_3:18907075-18907094 | None:intergenic | 35.0% | |
| TAGCGAATCATACGTTTACT+CGG | + | chr2_3:18907300-18907319 | None:intergenic | 35.0% | |
| ! | CAGGAAAGAGAGAAGACTTT+TGG | + | chr2_3:18901394-18901413 | None:intergenic | 40.0% |
| CCCATTATTTCACTTGGAGT+TGG | - | chr2_3:18901424-18901443 | Msa0282590:three_prime_UTR | 40.0% | |
| ! | GTGAAGAATCTTGTTGGTGA+TGG | - | chr2_3:18901649-18901668 | Msa0282590:CDS | 40.0% |
| !! | TTGGTGATGGACCAAAGTAA+AGG | - | chr2_3:18901662-18901681 | Msa0282590:CDS | 40.0% |
| !! | TGGTGATGGACCAAAGTAAA+GGG | - | chr2_3:18901663-18901682 | Msa0282590:CDS | 40.0% |
| ! | ACAAAGCTTTTCCAGTCATC+TGG | - | chr2_3:18901747-18901766 | Msa0282590:CDS | 40.0% |
| CAGCTAGATTTCTTCGTAAG+TGG | + | chr2_3:18901916-18901935 | None:intergenic | 40.0% | |
| GAGAAAGGGTTAGGTTAACA+GGG | + | chr2_3:18902191-18902210 | None:intergenic | 40.0% | |
| TGAGAAAGGGTTAGGTTAAC+AGG | + | chr2_3:18902192-18902211 | None:intergenic | 40.0% | |
| !! | CAATCACGTGCTTTTGAGAA+AGG | + | chr2_3:18902206-18902225 | None:intergenic | 40.0% |
| AGTCACAACTAACCATTTGG+TGG | - | chr2_3:18902278-18902297 | Msa0282590:CDS | 40.0% | |
| ! | TAATTGGAGTGGACCACTTT+TGG | - | chr2_3:18902346-18902365 | Msa0282590:CDS | 40.0% |
| TTAGTGACTCATGAGGATAG+TGG | + | chr2_3:18902600-18902619 | None:intergenic | 40.0% | |
| ! | TGTCTTAAGGGCACAAGATA+AGG | + | chr2_3:18903236-18903255 | None:intergenic | 40.0% |
| CTAAAGCCATTTCTCTGCAA+AGG | + | chr2_3:18904236-18904255 | None:intergenic | 40.0% | |
| !! | TTGCAGAGAAATGGCTTTAG+AGG | - | chr2_3:18904236-18904255 | Msa0282590:intron | 40.0% |
| TTGCTTCAGCTCAGTTTAGA+AGG | - | chr2_3:18904292-18904311 | Msa0282590:intron | 40.0% | |
| GTAGAAACTAAGTGGATGAG+AGG | + | chr2_3:18904318-18904337 | None:intergenic | 40.0% | |
| !!! | TGCAACTTTTTCGGTCGAAA+AGG | - | chr2_3:18904391-18904410 | Msa0282590:intron | 40.0% |
| ! | CATCTAACTATATCGGTTGC+TGG | + | chr2_3:18904852-18904871 | None:intergenic | 40.0% |
| CAGCAACCGATATAGTTAGA+TGG | - | chr2_3:18904850-18904869 | Msa0282590:intron | 40.0% | |
| TCACCGGTAGACTCTTTAAA+AGG | + | chr2_3:18904894-18904913 | None:intergenic | 40.0% | |
| !! | TTTAGTGCTGCTTTGTGAAG+GGG | + | chr2_3:18905203-18905222 | None:intergenic | 40.0% |
| !!! | CTTTTAGTGCTGCTTTGTGA+AGG | + | chr2_3:18905205-18905224 | None:intergenic | 40.0% |
| CTTCACAAAGCAGCACTAAA+AGG | - | chr2_3:18905203-18905222 | Msa0282590:intron | 40.0% | |
| AAGCAGCACTAAAAGGTGAT+TGG | - | chr2_3:18905210-18905229 | Msa0282590:intron | 40.0% | |
| TGGCAGAAATCAGCAATGTT+TGG | + | chr2_3:18905265-18905284 | None:intergenic | 40.0% | |
| TTTCTGCCATAACAAATGGC+TGG | - | chr2_3:18905276-18905295 | Msa0282590:intron | 40.0% | |
| TTCTGCCATAACAAATGGCT+GGG | - | chr2_3:18905277-18905296 | Msa0282590:intron | 40.0% | |
| TGTTCACTTTGTGGAGGAAT+TGG | - | chr2_3:18905334-18905353 | Msa0282590:intron | 40.0% | |
| !! | AGGTGTTACTCCTCTTTACT+TGG | - | chr2_3:18905502-18905521 | Msa0282590:intron | 40.0% |
| TGTAAAGCAGCCAAGTAAAG+AGG | + | chr2_3:18905515-18905534 | None:intergenic | 40.0% | |
| GTTCCTCACTTGTATAGACT+CGG | - | chr2_3:18905610-18905629 | Msa0282590:intron | 40.0% | |
| TTCCTCACTTGTATAGACTC+GGG | - | chr2_3:18905611-18905630 | Msa0282590:intron | 40.0% | |
| TGTATAGACTCGGGACTTTA+TGG | - | chr2_3:18905620-18905639 | Msa0282590:intron | 40.0% | |
| ! | TGAGACGGGTTTACATCTAT+TGG | - | chr2_3:18905853-18905872 | Msa0282590:intron | 40.0% |
| GTTTGTGGTTGTCAAAGTCT+TGG | - | chr2_3:18905890-18905909 | Msa0282590:intron | 40.0% | |
| CGTCGTATAAGCTTAAGCAT+TGG | + | chr2_3:18906224-18906243 | None:intergenic | 40.0% | |
| TTAAGCTTATACGACGCATC+TGG | - | chr2_3:18906228-18906247 | Msa0282590:intron | 40.0% | |
| TAAGCTTATACGACGCATCT+GGG | - | chr2_3:18906229-18906248 | Msa0282590:intron | 40.0% | |
| TCTAGATGACTCAGAGATGA+TGG | - | chr2_3:18906265-18906284 | Msa0282590:intron | 40.0% | |
| ! | TGATCGGCTCAATATAGTCT+CGG | - | chr2_3:18906556-18906575 | Msa0282590:intron | 40.0% |
| GCTCGAATTATCATGGTTTG+AGG | - | chr2_3:18906598-18906617 | Msa0282590:intron | 40.0% | |
| TCTTTCGTAAATAGTTCGCG+AGG | + | chr2_3:18906769-18906788 | None:intergenic | 40.0% | |
| GCAAACAGCGAATTCTTGTA+TGG | - | chr2_3:18906828-18906847 | Msa0282590:intron | 40.0% | |
| GTGTTATCATTGTTTCCACC+TGG | + | chr2_3:18906904-18906923 | None:intergenic | 40.0% | |
| AAAGCAAATACGAGGAATGC+TGG | + | chr2_3:18906952-18906971 | None:intergenic | 40.0% | |
| AGTCGGATAAAGCAAATACG+AGG | + | chr2_3:18906960-18906979 | None:intergenic | 40.0% | |
| ATTTGCTTTATCCGACTCCA+TGG | - | chr2_3:18906963-18906982 | Msa0282590:intron | 40.0% | |
| !! | GAAGTTGATATCTGGACTAG+TGG | - | chr2_3:18907077-18907096 | Msa0282590:intron | 40.0% |
| CAGAAATTCTCCTTGCAGCA+GGG | + | chr2_3:18901525-18901544 | None:intergenic | 45.0% | |
| TCAGAAATTCTCCTTGCAGC+AGG | + | chr2_3:18901526-18901545 | None:intergenic | 45.0% | |
| !! | CGTGCTTTTGAGAAAGGGTT+AGG | + | chr2_3:18902200-18902219 | None:intergenic | 45.0% |
| CCTTGAGTCTCAACCAAAAG+TGG | + | chr2_3:18902362-18902381 | None:intergenic | 45.0% | |
| !! | CCACTTTTGGTTGAGACTCA+AGG | - | chr2_3:18902359-18902378 | Msa0282590:CDS | 45.0% |
| TGACTGGTGAGTGACTTTGT+TGG | + | chr2_3:18902571-18902590 | None:intergenic | 45.0% | |
| GTCACACAAGTCAGGGAATA+TGG | + | chr2_3:18902813-18902832 | None:intergenic | 45.0% | |
| TCCTATCCTGACTCTCAAAC+GGG | + | chr2_3:18902835-18902854 | None:intergenic | 45.0% | |
| CTCCTATCCTGACTCTCAAA+CGG | + | chr2_3:18902836-18902855 | None:intergenic | 45.0% | |
| ! | CAATGGTTGCTGGCTAGATT+TGG | + | chr2_3:18904265-18904284 | None:intergenic | 45.0% |
| CAACTCTATGCAATGGTTGC+TGG | + | chr2_3:18904275-18904294 | None:intergenic | 45.0% | |
| GCTGAAGCAACTCTATGCAA+TGG | + | chr2_3:18904282-18904301 | None:intergenic | 45.0% | |
| !! | GAAGGGGAACACATTGGTTT+AGG | + | chr2_3:18905187-18905206 | None:intergenic | 45.0% |
| CTTTGTGAAGGGGAACACAT+TGG | + | chr2_3:18905193-18905212 | None:intergenic | 45.0% | |
| TTGTTGCCATCAATTAGGGG+TGG | - | chr2_3:18905476-18905495 | Msa0282590:intron | 45.0% | |
| AAGCAAACAGTGAGATGGCA+TGG | - | chr2_3:18905534-18905553 | Msa0282590:intron | 45.0% | |
| CAGAGGTGATAGCAATGAGA+CGG | - | chr2_3:18905838-18905857 | Msa0282590:intron | 45.0% | |
| AGAGGTGATAGCAATGAGAC+GGG | - | chr2_3:18905839-18905858 | Msa0282590:intron | 45.0% | |
| ! | GCTCGAAAACATTCGGTTTG+TGG | - | chr2_3:18905875-18905894 | Msa0282590:intron | 45.0% |
| ACAATTATCGCCGCAGAAGT+TGG | - | chr2_3:18906314-18906333 | Msa0282590:intron | 45.0% | |
| ACTATATTGAGCCGATCAGG+CGG | + | chr2_3:18906554-18906573 | None:intergenic | 45.0% | |
| GAGACTATATTGAGCCGATC+AGG | + | chr2_3:18906557-18906576 | None:intergenic | 45.0% | |
| ! | GATCGGCTCAATATAGTCTC+GGG | - | chr2_3:18906557-18906576 | Msa0282590:intron | 45.0% |
| GTTTCGACTCTCATAGCTAC+AGG | - | chr2_3:18906853-18906872 | Msa0282590:intron | 45.0% | |
| ! | TCAGCTGCATTTAGCTTACC+AGG | - | chr2_3:18906883-18906902 | Msa0282590:intron | 45.0% |
| TGAAGACGAGATAAGTGCCA+TGG | + | chr2_3:18906983-18907002 | None:intergenic | 45.0% | |
| CATCCTTATCTCGCGATATG+CGG | - | chr2_3:18907026-18907045 | Msa0282590:intron | 45.0% | |
| !! | AAGGCATTGCGCCTATTTCA+TGG | - | chr2_3:18907401-18907420 | Msa0282590:five_prime_UTR | 45.0% |
| !!! | ATTTTTACAATATTTAATTA+AGG | - | chr2_3:18903118-18903137 | Msa0282590:intron | 5.0% |
| !!! | TTTTTACAATATTTAATTAA+GGG | - | chr2_3:18903119-18903138 | Msa0282590:intron | 5.0% |
| !! | TTAAAAAAATTATAGAATAA+TGG | - | chr2_3:18903730-18903749 | Msa0282590:intron | 5.0% |
| !!! | AATAAATTTTATTGTTATTA+TGG | - | chr2_3:18907343-18907362 | Msa0282590:five_prime_UTR | 5.0% |
| ! | ACTCATGAGGATAGTGGTGG+TGG | + | chr2_3:18902594-18902613 | None:intergenic | 50.0% |
| ! | GTGACTCATGAGGATAGTGG+TGG | + | chr2_3:18902597-18902616 | None:intergenic | 50.0% |
| CAAACGGGTCACACAAGTCA+GGG | + | chr2_3:18902820-18902839 | None:intergenic | 50.0% | |
| TCAAACGGGTCACACAAGTC+AGG | + | chr2_3:18902821-18902840 | None:intergenic | 50.0% | |
| ACCCGTTTGAGAGTCAGGAT+AGG | - | chr2_3:18902831-18902850 | Msa0282590:intron | 50.0% | |
| ! | GGTTGCCCAGCCATTTGTTA+TGG | + | chr2_3:18905285-18905304 | None:intergenic | 50.0% |
| AACCGCACTCCATATTGCAG+CGG | - | chr2_3:18905301-18905320 | Msa0282590:intron | 50.0% | |
| ! | GATTTGCTCCCGCTGCAATA+TGG | + | chr2_3:18905313-18905332 | None:intergenic | 50.0% |
| TGCTCTTTGCTTTGCTGCAG+CGG | - | chr2_3:18905409-18905428 | Msa0282590:intron | 50.0% | |
| CCTAGTCCACCCCTAATTGA+TGG | + | chr2_3:18905485-18905504 | None:intergenic | 50.0% | |
| ! | CCATCAATTAGGGGTGGACT+AGG | - | chr2_3:18905482-18905501 | Msa0282590:intron | 50.0% |
| GTCCCGAGTCTATACAAGTG+AGG | + | chr2_3:18905616-18905635 | None:intergenic | 50.0% | |
| CAATGTTAGCACCGCCTGAT+CGG | - | chr2_3:18906540-18906559 | Msa0282590:intron | 50.0% | |
| ! | GCTGCATTTAGCTTACCAGG+TGG | - | chr2_3:18906886-18906905 | Msa0282590:intron | 50.0% |
| CGAGATAAGTGCCATGGAGT+CGG | + | chr2_3:18906977-18906996 | None:intergenic | 50.0% | |
| CGCATATCGCGAGATAAGGA+TGG | + | chr2_3:18907028-18907047 | None:intergenic | 50.0% | |
| CCTTGCAGCAGGGTGATTGA+TGG | + | chr2_3:18901515-18901534 | None:intergenic | 55.0% | |
| CCATCAATCACCCTGCTGCA+AGG | - | chr2_3:18901512-18901531 | Msa0282590:exon | 55.0% | |
| !! | AGGATAGTGGTGGTGGTGAC+TGG | + | chr2_3:18902587-18902606 | None:intergenic | 55.0% |
| GTGTGACCCGTTTGAGAGTC+AGG | - | chr2_3:18902826-18902845 | Msa0282590:intron | 55.0% | |
| ACCGCACTCCATATTGCAGC+GGG | - | chr2_3:18905302-18905321 | Msa0282590:intron | 55.0% | |
| TCCCGCTGCAATATGGAGTG+CGG | + | chr2_3:18905306-18905325 | None:intergenic | 55.0% | |
| CTTTGCTTTGCTGCAGCGGT+TGG | - | chr2_3:18905413-18905432 | Msa0282590:intron | 55.0% | |
| !! | GCACTTGCTTTTGCTCGCAG+AGG | - | chr2_3:18905821-18905840 | Msa0282590:intron | 55.0% |
| GCTCCGCATATCGCGAGATA+AGG | + | chr2_3:18907032-18907051 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 18901391 | 18907460 | 18901391 | ID=Msa0282590;Name=Msa0282590 |
| chr2_3 | mRNA | 18901391 | 18907460 | 18901391 | ID=Msa0282590-mRNA-1;Parent=Msa0282590;Name=Msa0282590-mRNA-1;_AED=0.33;_eAED=0.33;_QI=232|1|1|1|0.66|0.57|7|140|587 |
| chr2_3 | exon | 18901391 | 18902145 | 18901391 | ID=Msa0282590-mRNA-1:exon:7656;Parent=Msa0282590-mRNA-1 |
| chr2_3 | exon | 18902232 | 18902644 | 18902232 | ID=Msa0282590-mRNA-1:exon:7655;Parent=Msa0282590-mRNA-1 |
| chr2_3 | exon | 18902913 | 18903062 | 18902913 | ID=Msa0282590-mRNA-1:exon:7654;Parent=Msa0282590-mRNA-1 |
| chr2_3 | exon | 18903210 | 18903686 | 18903210 | ID=Msa0282590-mRNA-1:exon:7653;Parent=Msa0282590-mRNA-1 |
| chr2_3 | exon | 18904512 | 18904609 | 18904512 | ID=Msa0282590-mRNA-1:exon:7652;Parent=Msa0282590-mRNA-1 |
| chr2_3 | exon | 18906444 | 18906514 | 18906444 | ID=Msa0282590-mRNA-1:exon:7651;Parent=Msa0282590-mRNA-1 |
| chr2_3 | exon | 18907289 | 18907460 | 18907289 | ID=Msa0282590-mRNA-1:exon:7650;Parent=Msa0282590-mRNA-1 |
| chr2_3 | five_prime_UTR | 18907289 | 18907460 | 18907289 | ID=Msa0282590-mRNA-1:five_prime_utr;Parent=Msa0282590-mRNA-1 |
| chr2_3 | five_prime_UTR | 18906455 | 18906514 | 18906455 | ID=Msa0282590-mRNA-1:five_prime_utr;Parent=Msa0282590-mRNA-1 |
| chr2_3 | CDS | 18906444 | 18906454 | 18906444 | ID=Msa0282590-mRNA-1:cds;Parent=Msa0282590-mRNA-1 |
| chr2_3 | CDS | 18904512 | 18904609 | 18904512 | ID=Msa0282590-mRNA-1:cds;Parent=Msa0282590-mRNA-1 |
| chr2_3 | CDS | 18903210 | 18903686 | 18903210 | ID=Msa0282590-mRNA-1:cds;Parent=Msa0282590-mRNA-1 |
| chr2_3 | CDS | 18902913 | 18903062 | 18902913 | ID=Msa0282590-mRNA-1:cds;Parent=Msa0282590-mRNA-1 |
| chr2_3 | CDS | 18902232 | 18902644 | 18902232 | ID=Msa0282590-mRNA-1:cds;Parent=Msa0282590-mRNA-1 |
| chr2_3 | CDS | 18901531 | 18902145 | 18901531 | ID=Msa0282590-mRNA-1:cds;Parent=Msa0282590-mRNA-1 |
| chr2_3 | three_prime_UTR | 18901391 | 18901530 | 18901391 | ID=Msa0282590-mRNA-1:three_prime_utr;Parent=Msa0282590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
