Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580350 | XP_003611253.2 | 42.537 | 134 | 46 | 5 | 1 | 111 | 6 | 131 | 4.03e-20 | 94.0 |
| Msa0580350 | XP_003611253.2 | 68.310 | 142 | 14 | 2 | 101 | 211 | 19 | 160 | 1.17e-52 | 177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580350 | A0A396HPB0 | 42.537 | 134 | 46 | 5 | 1 | 111 | 6 | 131 | 1.92e-20 | 94.0 |
| Msa0580350 | A0A396HPB0 | 68.310 | 142 | 14 | 2 | 101 | 211 | 19 | 160 | 5.60e-53 | 177 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0580350 | Msa0754050 | 0.917869 | 3.134523e-86 | -8.615850e-47 |
| Msa0580350 | Msa0795840 | 0.872570 | 2.873489e-67 | -8.615850e-47 |
| Msa0580350 | Msa0833620 | 0.915501 | 5.464807e-85 | -8.615850e-47 |
| Msa0580350 | Msa1132810 | 0.893653 | 5.146519e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580350 | MtrunA17_Chr5g0398831 | 68.310 | 142 | 14 | 2 | 101 | 211 | 19 | 160 | 1.08e-56 | 177 |
| Msa0580350 | MtrunA17_Chr5g0398831 | 42.537 | 134 | 46 | 5 | 1 | 111 | 6 | 131 | 3.71e-24 | 94.0 |
| Msa0580350 | MtrunA17_Chr5g0398841 | 78.906 | 128 | 11 | 2 | 1 | 112 | 1 | 128 | 1.83e-53 | 168 |
| Msa0580350 | MtrunA17_Chr5g0398841 | 43.284 | 134 | 36 | 5 | 110 | 211 | 30 | 155 | 2.31e-22 | 89.0 |
| Msa0580350 | MtrunA17_Chr5g0398821 | 49.600 | 125 | 45 | 4 | 1 | 109 | 1 | 123 | 7.68e-31 | 110 |
| Msa0580350 | MtrunA17_Chr5g0398821 | 46.154 | 143 | 37 | 5 | 101 | 211 | 20 | 154 | 9.44e-28 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 48 sgRNAs with CRISPR-Local
Find 702 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGCTTCATAATGTTTATT+TGG | 0.113082 | 4_1:-85399699 | Msa0580350:CDS |
| ATGGCAGTGCAGCAAATTTC+TGG | 0.198263 | 4_1:+85400380 | None:intergenic |
| CATTTGCTGCAATCCAATTA+AGG | 0.297545 | 4_1:-85412352 | Msa0580350:CDS |
| GTTGACAGAAACATGTTTCT+TGG | 0.308780 | 4_1:+85400336 | None:intergenic |
| TGGCTTCATAATGTTTATTT+GGG | 0.314403 | 4_1:-85399698 | Msa0580350:CDS |
| CCTGGCCTACTCGAAAGTTT+TGG | 0.354767 | 4_1:-85412279 | Msa0580350:CDS |
| AGGATTGCTTTGACTGGACT+TGG | 0.371963 | 4_1:-85399718 | Msa0580350:CDS |
| CAATTTGCAGCAACACCTAT+AGG | 0.383382 | 4_1:-85399760 | Msa0580350:intron |
| GCTCCTCCTTCATCGCCTAT+AGG | 0.388009 | 4_1:+85399745 | None:intergenic |
| CCTGGAGGTTGCAGCAATGA+TGG | 0.402054 | 4_1:+85411804 | None:intergenic |
| GACAGAAACATGTATAATCA+TGG | 0.403279 | 4_1:+85412313 | None:intergenic |
| TTGACAGAAACATGTTTCTT+GGG | 0.414867 | 4_1:+85400337 | None:intergenic |
| TGTCAACTTGTCTACACTCC+TGG | 0.415519 | 4_1:-85400320 | Msa0580350:intron |
| TTATGAGGATGATGGTGGTT+TGG | 0.421436 | 4_1:-85412497 | Msa0580350:CDS |
| TCCAACTCTTCCGCTGTCCT+CGG | 0.441042 | 4_1:-85400019 | Msa0580350:CDS |
| ATTTCTGGTGGGTAAATGTC+TGG | 0.443904 | 4_1:+85400395 | None:intergenic |
| TACTCAATGCATGGCAATAA+CGG | 0.459278 | 4_1:+85400443 | None:intergenic |
| AAAATTGCAGCTTCTTCTCC+AGG | 0.461247 | 4_1:-85411834 | Msa0580350:intron |
| ATTGGATTGCAGCAAATGTC+TGG | 0.495953 | 4_1:+85412357 | None:intergenic |
| GCAGGCAGGATTGCTTTGAC+TGG | 0.498121 | 4_1:-85399724 | Msa0580350:CDS |
| CCATCATTGCTGCAACCTCC+AGG | 0.500501 | 4_1:-85411804 | Msa0580350:intron |
| ATTGCAGAATGTCTATTATG+AGG | 0.514995 | 4_1:-85412512 | Msa0580350:CDS |
| ATAGGCGATGAAGGAGGAGC+AGG | 0.517954 | 4_1:-85399742 | Msa0580350:CDS |
| CAAATGCTTCCACCTTGTGC+TGG | 0.524026 | 4_1:-85412426 | Msa0580350:CDS |
| GGCAATAACGGTTTACCGCA+AGG | 0.528171 | 4_1:+85400455 | None:intergenic |
| CCAAAACTTTCGAGTAGGCC+AGG | 0.539426 | 4_1:+85412279 | None:intergenic |
| ACAGAAACATGTATAATCAT+GGG | 0.545168 | 4_1:+85412314 | None:intergenic |
| ACCGAGGACAGCGGAAGAGT+TGG | 0.547165 | 4_1:+85400018 | None:intergenic |
| GTCTGGTATCGAATGACTAG+TGG | 0.558633 | 4_1:+85400412 | None:intergenic |
| GCAACACCTATAGGCGATGA+AGG | 0.558893 | 4_1:-85399751 | Msa0580350:CDS |
| TAACACCAAAACTTTCGAGT+AGG | 0.584719 | 4_1:+85412274 | None:intergenic |
| GCGATGAAGGAGGAGCAGGC+AGG | 0.601767 | 4_1:-85399738 | Msa0580350:CDS |
| AATGTCTATTATGAGGATGA+TGG | 0.602352 | 4_1:-85412505 | Msa0580350:CDS |
| CTGGTGGATGAGTGGAATTG+AGG | 0.608601 | 4_1:+85412376 | None:intergenic |
| GAGTTAGCGTACTCAATGCA+TGG | 0.614602 | 4_1:+85400434 | None:intergenic |
| GCAAATGTCTGGTGGATGAG+TGG | 0.618915 | 4_1:+85412368 | None:intergenic |
| GCGCAAGTTCTTCCACCTTG+CGG | 0.619137 | 4_1:-85400470 | Msa0580350:CDS |
| GCAGTGCAGCAAATTTCTGG+TGG | 0.622142 | 4_1:+85400383 | None:intergenic |
| GTCTATTATGAGGATGATGG+TGG | 0.635774 | 4_1:-85412502 | Msa0580350:CDS |
| CAGTGCAGCAAATTTCTGGT+GGG | 0.637524 | 4_1:+85400384 | None:intergenic |
| GTCAAAGTTGTTAACTCATG+TGG | 0.638396 | 4_1:-85412237 | Msa0580350:intron |
| AGCAATGATGGAGAAAGACC+TGG | 0.643773 | 4_1:+85411816 | None:intergenic |
| AACATCTTATCACCAGCACA+AGG | 0.675106 | 4_1:+85412414 | None:intergenic |
| ACACCTATAGGCGATGAAGG+AGG | 0.684346 | 4_1:-85399748 | Msa0580350:CDS |
| GAATTGAGGTAGTCTGTGCA+TGG | 0.688761 | 4_1:+85412390 | None:intergenic |
| ATCTTATCACCAGCACAAGG+TGG | 0.690594 | 4_1:+85412417 | None:intergenic |
| GGATTGCAGCAAATGTCTGG+TGG | 0.693607 | 4_1:+85412360 | None:intergenic |
| AATAACGGTTTACCGCAAGG+TGG | 0.780362 | 4_1:+85400458 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGAATTAACATTTTTTTA+AGG | + | chr4_1:85400538-85400557 | None:intergenic | 10.0% |
| !!! | ATTGATTTATTTTTAAACTT+AGG | + | chr4_1:85400668-85400687 | None:intergenic | 10.0% |
| !! | AATAATTCCATTAAAAAAAT+AGG | - | chr4_1:85400797-85400816 | Msa0580350:intron | 10.0% |
| !! | ATAATTCCATTAAAAAAATA+GGG | - | chr4_1:85400798-85400817 | Msa0580350:intron | 10.0% |
| !!! | TTATTTCTTTTTGAAATATA+GGG | + | chr4_1:85400901-85400920 | None:intergenic | 10.0% |
| !!! | ATTATTTCTTTTTGAAATAT+AGG | + | chr4_1:85400902-85400921 | None:intergenic | 10.0% |
| !!! | GAATTTTTAATAAAAGATAA+AGG | - | chr4_1:85401400-85401419 | Msa0580350:intron | 10.0% |
| !! | TTATTCATATTTACTTAAAT+AGG | - | chr4_1:85402715-85402734 | Msa0580350:intron | 10.0% |
| !! | AAATAAAACAAAAATAATAG+AGG | - | chr4_1:85404478-85404497 | Msa0580350:intron | 10.0% |
| !! | AATAAAACAAAAATAATAGA+GGG | - | chr4_1:85404479-85404498 | Msa0580350:intron | 10.0% |
| !! | CATAAAAATATATATATTTC+TGG | - | chr4_1:85405912-85405931 | Msa0580350:intron | 10.0% |
| !! | AAACAAAACAAAAATAATAT+AGG | - | chr4_1:85406294-85406313 | Msa0580350:intron | 10.0% |
| !! | AACAAAACAAAAATAATATA+GGG | - | chr4_1:85406295-85406314 | Msa0580350:intron | 10.0% |
| !!! | TAATATGTTTTATTAAATTG+AGG | + | chr4_1:85407655-85407674 | None:intergenic | 10.0% |
| !!! | TTTATAAGCTTTAATTTATT+TGG | - | chr4_1:85409103-85409122 | Msa0580350:intron | 10.0% |
| !! | AAAAAAATTCCTTAAAAAAA+TGG | - | chr4_1:85409453-85409472 | Msa0580350:intron | 10.0% |
| !!! | AATTTTTTACCATTTTTTTA+AGG | + | chr4_1:85409465-85409484 | None:intergenic | 10.0% |
| !!! | AAAAAATGTGATTTTAATTA+AGG | - | chr4_1:85409633-85409652 | Msa0580350:intron | 10.0% |
| !!! | ATATATCATCCAATTATTTT+CGG | - | chr4_1:85400085-85400104 | Msa0580350:intron | 15.0% |
| !!! | TTTTAAAAGAATTTTGTCTA+CGG | - | chr4_1:85400149-85400168 | Msa0580350:intron | 15.0% |
| !!! | TTTTTTAGTAGAAAATAATC+AGG | + | chr4_1:85400311-85400330 | None:intergenic | 15.0% |
| !!! | GTAGTTTTCTTTAAATAAAT+AGG | - | chr4_1:85400729-85400748 | Msa0580350:intron | 15.0% |
| !!! | ATTTTTCCCTATTTTTTTAA+TGG | + | chr4_1:85400807-85400826 | None:intergenic | 15.0% |
| !! | ATATATCATTCTCATAAATA+TGG | - | chr4_1:85401114-85401133 | Msa0580350:intron | 15.0% |
| !! | TATATCATTCTCATAAATAT+GGG | - | chr4_1:85401115-85401134 | Msa0580350:intron | 15.0% |
| !!! | AAAATAACATACTTTTTTCT+TGG | - | chr4_1:85401162-85401181 | Msa0580350:intron | 15.0% |
| !!! | AATCCTTTATCTTTTTAAAA+AGG | - | chr4_1:85401235-85401254 | Msa0580350:intron | 15.0% |
| !!! | AACTTTTTTCTAAATCATTT+CGG | + | chr4_1:85401367-85401386 | None:intergenic | 15.0% |
| !!! | CTTTTATTAAAAATTCGTTT+TGG | + | chr4_1:85401396-85401415 | None:intergenic | 15.0% |
| !! | TTTAAACATTATAAAAACAG+TGG | + | chr4_1:85401590-85401609 | None:intergenic | 15.0% |
| !! | ATGTAATGATGTAAAATTAT+TGG | - | chr4_1:85401744-85401763 | Msa0580350:intron | 15.0% |
| !!! | ACATCTCAAATTTTTAAAAT+TGG | + | chr4_1:85402023-85402042 | None:intergenic | 15.0% |
| !! | ACAAATATAACAATTATTGT+TGG | + | chr4_1:85402958-85402977 | None:intergenic | 15.0% |
| !!! | TTAAAAATGACAAGTATTTT+AGG | + | chr4_1:85402992-85403011 | None:intergenic | 15.0% |
| !! | ATAAGTCAAAAATAAGTTAT+TGG | + | chr4_1:85403121-85403140 | None:intergenic | 15.0% |
| !! | TATTCTAAATTAACTTCTAT+AGG | + | chr4_1:85403344-85403363 | None:intergenic | 15.0% |
| !! | GCAACAATTAAAATAAATTA+TGG | + | chr4_1:85404516-85404535 | None:intergenic | 15.0% |
| !!! | TTTAATTGTTGCAAATATTT+TGG | - | chr4_1:85404524-85404543 | Msa0580350:intron | 15.0% |
| !! | AGATAAAACATAACATATTT+GGG | - | chr4_1:85406114-85406133 | Msa0580350:intron | 15.0% |
| !! | GCAACAATTAAAATAAATTA+TGG | + | chr4_1:85404516-85404535 | None:intergenic | 15.0% |
| !!! | TTTAATTGTTGCAATTATTT+TGG | - | chr4_1:85406340-85406359 | Msa0580350:intron | 15.0% |
| !! | AGAAAAAACATAACATATTT+GGG | - | chr4_1:85406939-85406958 | Msa0580350:intron | 15.0% |
| !! | TGACTTATCATAAATTAAAT+TGG | - | chr4_1:85407693-85407712 | Msa0580350:intron | 15.0% |
| !! | ATATTGTTTCATTAAAAAAG+TGG | - | chr4_1:85407890-85407909 | Msa0580350:intron | 15.0% |
| !!! | AATAATACCAAATACAATTT+TGG | + | chr4_1:85408032-85408051 | None:intergenic | 15.0% |
| !!! | TTTAATTTATTTGGTTGTTT+GGG | - | chr4_1:85409112-85409131 | Msa0580350:intron | 15.0% |
| !! | ATTAACATCATTTGATATAT+TGG | + | chr4_1:85409299-85409318 | None:intergenic | 15.0% |
| !!! | ATGTTTGATTTTAATTGATT+GGG | - | chr4_1:85409780-85409799 | Msa0580350:intron | 15.0% |
| !! | TCTTTAACATTCTAATATAA+AGG | + | chr4_1:85410957-85410976 | None:intergenic | 15.0% |
| !!! | AATTTTCTTTTACTAGAAAA+GGG | + | chr4_1:85411241-85411260 | None:intergenic | 15.0% |
| !!! | TAATTTTCTTTTACTAGAAA+AGG | + | chr4_1:85411242-85411261 | None:intergenic | 15.0% |
| !!! | GAAATTTTATTTTGCTTTAT+TGG | - | chr4_1:85412138-85412157 | Msa0580350:intron | 15.0% |
| !! | AACTAAAAAATGAAATTTAG+AGG | + | chr4_1:85412222-85412241 | None:intergenic | 15.0% |
| !! | ACACATATATATGAGTAATA+TGG | + | chr4_1:85400018-85400037 | None:intergenic | 20.0% |
| !! | ATTATTGTACCGAAAATAAT+TGG | + | chr4_1:85400097-85400116 | None:intergenic | 20.0% |
| !!! | AATAAATTACCTTTACGTTT+TGG | - | chr4_1:85400340-85400359 | Msa0580350:CDS | 20.0% |
| !!! | TGTATCTATAATCTTTTTTG+AGG | - | chr4_1:85400936-85400955 | Msa0580350:intron | 20.0% |
| !!! | GTATCTATAATCTTTTTTGA+GGG | - | chr4_1:85400937-85400956 | Msa0580350:intron | 20.0% |
| !! | TCTTGGCTTAAATATATATT+TGG | - | chr4_1:85401179-85401198 | Msa0580350:intron | 20.0% |
| !!! | TCACCTTTTTAAAAAGATAA+AGG | + | chr4_1:85401241-85401260 | None:intergenic | 20.0% |
| !!! | ATTTTAGTCCTTATTTTCAT+TGG | - | chr4_1:85401262-85401281 | Msa0580350:intron | 20.0% |
| !! | TATCAATGCATAAAAAAAAG+TGG | - | chr4_1:85401494-85401513 | Msa0580350:intron | 20.0% |
| !!! | TCTCTTAATAAAAGTGTTAT+TGG | - | chr4_1:85401817-85401836 | Msa0580350:intron | 20.0% |
| !!! | CAAGCTAATTTTATTTGTAT+TGG | - | chr4_1:85402089-85402108 | Msa0580350:intron | 20.0% |
| !! | AATATCAAATAGTACAACTT+TGG | + | chr4_1:85402183-85402202 | None:intergenic | 20.0% |
| !!! | TTTCATTTCTATAAGCTTTT+AGG | - | chr4_1:85402255-85402274 | Msa0580350:intron | 20.0% |
| !!! | TTCATTTCTATAAGCTTTTA+GGG | - | chr4_1:85402256-85402275 | Msa0580350:intron | 20.0% |
| !!! | TATGAAATAGACTTTTAAAC+AGG | + | chr4_1:85402431-85402450 | None:intergenic | 20.0% |
| !!! | ATAATCAACATGAGTTTTTA+GGG | - | chr4_1:85402533-85402552 | Msa0580350:intron | 20.0% |
| !! | ATATAACAATTATTGTTGGA+CGG | + | chr4_1:85402954-85402973 | None:intergenic | 20.0% |
| !!! | TGAGATAATTTTATCAAAGT+AGG | + | chr4_1:85403310-85403329 | None:intergenic | 20.0% |
| !! | AAATTAACTTCTATAGGTTA+AGG | + | chr4_1:85403338-85403357 | None:intergenic | 20.0% |
| !!! | ATGTTTTTAATTTTCCAACA+TGG | + | chr4_1:85403416-85403435 | None:intergenic | 20.0% |
| !!! | TAAGCAAATTTTGACTTTTT+AGG | - | chr4_1:85403475-85403494 | Msa0580350:intron | 20.0% |
| !! | CATTTAATAAATGATGTATG+TGG | - | chr4_1:85403500-85403519 | Msa0580350:intron | 20.0% |
| !! | CATTTAATAAATGATGTATG+TGG | - | chr4_1:85403500-85403519 | Msa0580350:intron | 20.0% |
| !!! | ACTTTTTAGATTCATTTATG+TGG | + | chr4_1:85403666-85403685 | None:intergenic | 20.0% |
| !! | AATTTATAAAACCAACAACT+TGG | - | chr4_1:85404380-85404399 | Msa0580350:intron | 20.0% |
| !! | ATATGAGATATGAAATCAAA+TGG | + | chr4_1:85404423-85404442 | None:intergenic | 20.0% |
| !!! | TGTTGTTATTGTAGTTATTA+TGG | + | chr4_1:85404565-85404584 | None:intergenic | 20.0% |
| !! | TCTCAAATCAAACATAAAAT+CGG | - | chr4_1:85404855-85404874 | Msa0580350:intron | 20.0% |
| !!! | TATGTTTTATCTAACTCATT+TGG | + | chr4_1:85405041-85405060 | None:intergenic | 20.0% |
| !! | AAATGAGTTAGATAAAACAT+AGG | - | chr4_1:85405040-85405059 | Msa0580350:intron | 20.0% |
| !! | TTAAAGTAGCAATAATTGAA+CGG | + | chr4_1:85405075-85405094 | None:intergenic | 20.0% |
| !!! | TCAATAACAGATTTAACTTT+GGG | + | chr4_1:85405395-85405414 | None:intergenic | 20.0% |
| !!! | TTCAATAACAGATTTAACTT+TGG | + | chr4_1:85405396-85405415 | None:intergenic | 20.0% |
| !! | TTATTGGAAAACAAAAATTG+TGG | + | chr4_1:85405545-85405564 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTCCAATAACAA+AGG | - | chr4_1:85405548-85405567 | Msa0580350:intron | 20.0% |
| !! | AAAATATCGTTAAAGACATT+TGG | + | chr4_1:85405846-85405865 | None:intergenic | 20.0% |
| !! | TAATTTAGCAGAATATGAAT+TGG | + | chr4_1:85406015-85406034 | None:intergenic | 20.0% |
| !! | TTTCCATTAAAATTGAAGAT+TGG | + | chr4_1:85406067-85406086 | None:intergenic | 20.0% |
| !!! | TTCAATTTTAATGGAAATTC+TGG | - | chr4_1:85406070-85406089 | Msa0580350:intron | 20.0% |
| !! | GAGATAAAACATAACATATT+TGG | - | chr4_1:85406113-85406132 | Msa0580350:intron | 20.0% |
| !! | TATTTGGGAAACATTTAAAA+CGG | - | chr4_1:85406129-85406148 | Msa0580350:intron | 20.0% |
| !! | TATTATATTTCCTATATGAG+AGG | + | chr4_1:85406366-85406385 | None:intergenic | 20.0% |
| !! | TCTCAAATCAAACATAAAAT+CGG | - | chr4_1:85404855-85404874 | Msa0580350:intron | 20.0% |
| !! | TAATTTAGCAGAATATGAAT+TGG | + | chr4_1:85406015-85406034 | None:intergenic | 20.0% |
| !! | AGAATTTCCATTAAAATTGA+AGG | + | chr4_1:85406071-85406090 | None:intergenic | 20.0% |
| !!! | TTCAATTTTAATGGAAATTC+TGG | - | chr4_1:85406070-85406089 | Msa0580350:intron | 20.0% |
| !! | GAGAAAAAACATAACATATT+TGG | - | chr4_1:85406938-85406957 | Msa0580350:intron | 20.0% |
| !! | GAAAAAACATAACATATTTG+GGG | - | chr4_1:85406940-85406959 | Msa0580350:intron | 20.0% |
| !! | TTGAATATGTTACAATTGAA+AGG | + | chr4_1:85407044-85407063 | None:intergenic | 20.0% |
| !! | AAGATAGTTATTTAGAGAAT+GGG | + | chr4_1:85407378-85407397 | None:intergenic | 20.0% |
| !!! | ATCTTCTATCTTTTAAGATT+TGG | - | chr4_1:85407393-85407412 | Msa0580350:intron | 20.0% |
| !!! | TTTTATTAAATTGAGGCATT+CGG | + | chr4_1:85407648-85407667 | None:intergenic | 20.0% |
| !! | ATGAAACACATTCAATAATA+AGG | + | chr4_1:85408061-85408080 | None:intergenic | 20.0% |
| !! | TGAAAATATGACGATTATTA+TGG | + | chr4_1:85408124-85408143 | None:intergenic | 20.0% |
| !! | GAAAAATATCCATATATAGT+AGG | - | chr4_1:85408154-85408173 | Msa0580350:intron | 20.0% |
| !!! | AATATCAAATAGTACAGTTT+TGG | + | chr4_1:85408316-85408335 | None:intergenic | 20.0% |
| !!! | CACTTATCATATCTTTTTAA+TGG | - | chr4_1:85408688-85408707 | Msa0580350:intron | 20.0% |
| !! | AAAGCTCAAATAAATTAAAG+TGG | - | chr4_1:85408744-85408763 | Msa0580350:intron | 20.0% |
| !! | AATTAAAACATAACATGCAA+TGG | + | chr4_1:85408800-85408819 | None:intergenic | 20.0% |
| !!! | CTTTAATTTATTTGGTTGTT+TGG | - | chr4_1:85409111-85409130 | Msa0580350:intron | 20.0% |
| !!! | ATTAATATGACTTCCATTTT+TGG | - | chr4_1:85409416-85409435 | Msa0580350:intron | 20.0% |
| !!! | TTAATATGACTTCCATTTTT+GGG | - | chr4_1:85409417-85409436 | Msa0580350:intron | 20.0% |
| !! | CTTTATTATTCCATGAAAAT+TGG | + | chr4_1:85409496-85409515 | None:intergenic | 20.0% |
| !! | GTATGAATAATTAATCTCTT+AGG | + | chr4_1:85409574-85409593 | None:intergenic | 20.0% |
| !!! | AACATGTGTCATATTTTTAT+TGG | + | chr4_1:85409603-85409622 | None:intergenic | 20.0% |
| !!! | TGTGATTTTAATTAAGGAAA+TGG | - | chr4_1:85409639-85409658 | Msa0580350:intron | 20.0% |
| !!! | GATGTTTGATTTTAATTGAT+TGG | - | chr4_1:85409779-85409798 | Msa0580350:intron | 20.0% |
| !! | ACAATGATATAATAATCAGT+AGG | + | chr4_1:85409955-85409974 | None:intergenic | 20.0% |
| !! | AATGTTAAAGAATCATACAT+TGG | - | chr4_1:85410966-85410985 | Msa0580350:intron | 20.0% |
| !! | GATTTCTATCTTAAAAATCA+TGG | + | chr4_1:85411077-85411096 | None:intergenic | 20.0% |
| !! | TGATAACTTCTACTTAAAAT+CGG | + | chr4_1:85411101-85411120 | None:intergenic | 20.0% |
| !! | TAATATATTACTTATTAGGC+CGG | - | chr4_1:85411545-85411564 | Msa0580350:intron | 20.0% |
| !! | TATATATGTAAATGATGCTT+TGG | + | chr4_1:85411591-85411610 | None:intergenic | 20.0% |
| !! | AATGAATAGTATTCTGTTAA+TGG | - | chr4_1:85411672-85411691 | Msa0580350:intron | 20.0% |
| !!! | TTTTATTTTGTTGACAAAAG+AGG | - | chr4_1:85412333-85412352 | Msa0580350:CDS | 20.0% |
| ! | GCTTCAAAAATTTCCTTAAT+TGG | + | chr4_1:85399861-85399880 | None:intergenic | 25.0% |
| ! | ACAGAAACATGTATAATCAT+GGG | + | chr4_1:85399886-85399905 | None:intergenic | 25.0% |
| !!! | GTTTTTTGAACAAGCAAAAA+TGG | + | chr4_1:85400211-85400230 | None:intergenic | 25.0% |
| !!! | TTTCTCTCTGTCTTTATTTT+TGG | - | chr4_1:85400431-85400450 | Msa0580350:CDS | 25.0% |
| !!! | TTCTCTCTGTCTTTATTTTT+GGG | - | chr4_1:85400432-85400451 | Msa0580350:CDS | 25.0% |
| ! | CTTTGTAAGTAAAAGTTGTT+TGG | + | chr4_1:85400691-85400710 | None:intergenic | 25.0% |
| !! | AATCAAAGAGTACAAAACAA+TGG | - | chr4_1:85400968-85400987 | Msa0580350:intron | 25.0% |
| ! | TACCAAAACCAATGAAAATA+AGG | + | chr4_1:85401273-85401292 | None:intergenic | 25.0% |
| !! | ATCACTCTTTAAAAAGATAG+AGG | - | chr4_1:85401311-85401330 | Msa0580350:intron | 25.0% |
| ! | AATGATGTAAAATTATTGGC+CGG | - | chr4_1:85401748-85401767 | Msa0580350:intron | 25.0% |
| !!! | CATTTTTTTTAAATGAGTCC+CGG | + | chr4_1:85401770-85401789 | None:intergenic | 25.0% |
| ! | ACTACTTCATATTGTTCATT+TGG | - | chr4_1:85401949-85401968 | Msa0580350:intron | 25.0% |
| ! | CTACTTCATATTGTTCATTT+GGG | - | chr4_1:85401950-85401969 | Msa0580350:intron | 25.0% |
| !!! | AGAAGTTAACATTTTTTCCA+CGG | - | chr4_1:85402144-85402163 | Msa0580350:intron | 25.0% |
| !! | AAATAGTACAACTTTGGTTT+AGG | + | chr4_1:85402177-85402196 | None:intergenic | 25.0% |
| !! | GATAATCAACATGAGTTTTT+AGG | - | chr4_1:85402532-85402551 | Msa0580350:intron | 25.0% |
| ! | TCATATTTACTTAAATAGGC+CGG | - | chr4_1:85402719-85402738 | Msa0580350:intron | 25.0% |
| ! | CTCTATTTAAGAAAAAAGTC+TGG | - | chr4_1:85402824-85402843 | Msa0580350:intron | 25.0% |
| ! | ATAGACGAATAAAGCTTATA+GGG | + | chr4_1:85402913-85402932 | None:intergenic | 25.0% |
| ! | AATAGACGAATAAAGCTTAT+AGG | + | chr4_1:85402914-85402933 | None:intergenic | 25.0% |
| ! | TATAACAATTATTGTTGGAC+GGG | + | chr4_1:85402953-85402972 | None:intergenic | 25.0% |
| ! | AGGTCATTTCTGTAAAATTA+AGG | + | chr4_1:85403212-85403231 | None:intergenic | 25.0% |
| !! | TATTCTAAAAATGCCATAGT+AGG | + | chr4_1:85403232-85403251 | None:intergenic | 25.0% |
| ! | ATAACCAGACAAAATGAATT+TGG | + | chr4_1:85403260-85403279 | None:intergenic | 25.0% |
| ! | AAACAACTAGCCAAAAAATA+AGG | - | chr4_1:85403366-85403385 | Msa0580350:intron | 25.0% |
| !!! | TAATGACGAACCTTATTTTT+TGG | + | chr4_1:85403379-85403398 | None:intergenic | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | + | chr4_1:85403574-85403593 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr4_1:85403539-85403558 | None:intergenic | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | - | chr4_1:85403574-85403593 | Msa0580350:intron | 25.0% |
| ! | ATTGGTATCCAATACAAATA+CGG | + | chr4_1:85403972-85403991 | None:intergenic | 25.0% |
| !! | CTAGTTTGTCTCTTATATAA+GGG | + | chr4_1:85404060-85404079 | None:intergenic | 25.0% |
| ! | ATGTAGTGAAAAATAAGCAA+GGG | + | chr4_1:85404119-85404138 | None:intergenic | 25.0% |
| ! | CATTCATACTATTTCGTATT+TGG | - | chr4_1:85404214-85404233 | Msa0580350:intron | 25.0% |
| ! | TTATTAATCATCCAAGTTGT+TGG | + | chr4_1:85404394-85404413 | None:intergenic | 25.0% |
| !!! | GTAAGTTTTGCTATTAATTG+CGG | + | chr4_1:85404593-85404612 | None:intergenic | 25.0% |
| ! | ATATAATAGTCCCTAATCTT+AGG | - | chr4_1:85405098-85405117 | Msa0580350:intron | 25.0% |
| ! | ACACTGTTATTAATTATGCA+CGG | - | chr4_1:85405336-85405355 | Msa0580350:intron | 25.0% |
| ! | ATAATTAACACGTCTAGTTA+TGG | - | chr4_1:85405446-85405465 | Msa0580350:intron | 25.0% |
| ! | GTAATACTTGAAAACAGAAA+AGG | - | chr4_1:85405934-85405953 | Msa0580350:intron | 25.0% |
| ! | CTATAACAACCATAATTGAA+CGG | + | chr4_1:85405963-85405982 | None:intergenic | 25.0% |
| !! | AAGCCAATCTTCAATTTTAA+TGG | - | chr4_1:85406061-85406080 | Msa0580350:intron | 25.0% |
| !!! | AATTTTAATGGAAATTCTGG+TGG | - | chr4_1:85406073-85406092 | Msa0580350:intron | 25.0% |
| ! | TCACAGATTATTATTACAGA+GGG | - | chr4_1:85406187-85406206 | Msa0580350:intron | 25.0% |
| !! | ATATCAATCTTTTCTGCATT+TGG | + | chr4_1:85406710-85406729 | None:intergenic | 25.0% |
| !! | AAGCTAACCTTCAATTTTAA+TGG | - | chr4_1:85406886-85406905 | Msa0580350:intron | 25.0% |
| !!! | AATTTTAATGGAAATTCTGG+TGG | - | chr4_1:85406073-85406092 | Msa0580350:intron | 25.0% |
| ! | GAAGATAGTTATTTAGAGAA+TGG | + | chr4_1:85407379-85407398 | None:intergenic | 25.0% |
| !! | GATTTGGAATGAATAATACT+TGG | - | chr4_1:85407409-85407428 | Msa0580350:intron | 25.0% |
| ! | AAAAACTGAAAGAAAAGTAG+AGG | - | chr4_1:85407581-85407600 | Msa0580350:intron | 25.0% |
| ! | ACCTAAACCAAAATTGTATT+TGG | - | chr4_1:85408022-85408041 | Msa0580350:intron | 25.0% |
| !!! | ACCAAATACAATTTTGGTTT+AGG | + | chr4_1:85408026-85408045 | None:intergenic | 25.0% |
| ! | TTGAGTACAACTCTATAATA+GGG | + | chr4_1:85408096-85408115 | None:intergenic | 25.0% |
| ! | ATTGAGTACAACTCTATAAT+AGG | + | chr4_1:85408097-85408116 | None:intergenic | 25.0% |
| ! | ATGTCCAAATGATTAATGAA+CGG | + | chr4_1:85408235-85408254 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGTTCCATTAAGA+TGG | - | chr4_1:85408258-85408277 | Msa0580350:intron | 25.0% |
| !!! | AAATAGTACAGTTTTGGTTT+AGG | + | chr4_1:85408310-85408329 | None:intergenic | 25.0% |
| ! | TAGAAACATGAAATGCAAAT+AGG | + | chr4_1:85408601-85408620 | None:intergenic | 25.0% |
| ! | TATTTGCATTTCATGTTTCT+AGG | - | chr4_1:85408600-85408619 | Msa0580350:intron | 25.0% |
| ! | AATTAAAGTGGCAAATAACA+TGG | - | chr4_1:85408756-85408775 | Msa0580350:intron | 25.0% |
| ! | TGTATATTAAGATCAAACCT+TGG | - | chr4_1:85408984-85409003 | Msa0580350:intron | 25.0% |
| !! | TGTTTTCCATGCATTTAATT+TGG | - | chr4_1:85409066-85409085 | Msa0580350:intron | 25.0% |
| ! | AAACAACCAAATTAAATGCA+TGG | + | chr4_1:85409075-85409094 | None:intergenic | 25.0% |
| ! | ATCATTGTATATCCCAAAAA+TGG | + | chr4_1:85409432-85409451 | None:intergenic | 25.0% |
| !! | TTTGTAATCACCAATTTTCA+TGG | - | chr4_1:85409483-85409502 | Msa0580350:intron | 25.0% |
| !!! | GTGTCATATTTTTATTGGTT+GGG | + | chr4_1:85409598-85409617 | None:intergenic | 25.0% |
| !!! | TGTGTCATATTTTTATTGGT+TGG | + | chr4_1:85409599-85409618 | None:intergenic | 25.0% |
| ! | AAGGAAATGGAAACAATAAA+TGG | - | chr4_1:85409652-85409671 | Msa0580350:intron | 25.0% |
| !!! | TTTTTGTTGGTTAAAGAAAG+TGG | - | chr4_1:85409685-85409704 | Msa0580350:intron | 25.0% |
| !! | TTTTACTATTTGCAAAACAG+AGG | - | chr4_1:85410075-85410094 | Msa0580350:intron | 25.0% |
| ! | TTTACTATTTGCAAAACAGA+GGG | - | chr4_1:85410076-85410095 | Msa0580350:intron | 25.0% |
| !! | TGTTGATTGAAAATTACTCT+TGG | + | chr4_1:85410391-85410410 | None:intergenic | 25.0% |
| !! | TTCTGTTGTGAAATTTTTGT+TGG | + | chr4_1:85410478-85410497 | None:intergenic | 25.0% |
| !! | TGTCTTAATCTATCTTCTTT+TGG | + | chr4_1:85410701-85410720 | None:intergenic | 25.0% |
| ! | TCATTCTCAATTCTTGATAA+TGG | - | chr4_1:85410903-85410922 | Msa0580350:intron | 25.0% |
| ! | CAAAAAAAAATCAGTTTGTG+AGG | + | chr4_1:85411038-85411057 | None:intergenic | 25.0% |
| ! | AAAATAAACCAAAGCAATTC+AGG | - | chr4_1:85411447-85411466 | Msa0580350:intron | 25.0% |
| !!! | TTTGGTTTATTTTGGTGATA+CGG | + | chr4_1:85411573-85411592 | None:intergenic | 25.0% |
| !!! | AATGATGCTTTGGTTTATTT+TGG | + | chr4_1:85411581-85411600 | None:intergenic | 25.0% |
| ! | ATATATACACATTTCGACAT+AGG | - | chr4_1:85411606-85411625 | Msa0580350:intron | 25.0% |
| ! | CGAAATTAATTGCAACAAAA+TGG | - | chr4_1:85411639-85411658 | Msa0580350:intron | 25.0% |
| ! | TGCATCAAAAACATCTTTAA+TGG | + | chr4_1:85411839-85411858 | None:intergenic | 25.0% |
| ! | CATGATAACAATGCATTAAT+AGG | + | chr4_1:85412119-85412138 | None:intergenic | 25.0% |
| ! | TTGGCTTCATAATGTTTATT+TGG | - | chr4_1:85412498-85412517 | Msa0580350:CDS | 25.0% |
| ! | TGGCTTCATAATGTTTATTT+GGG | - | chr4_1:85412499-85412518 | Msa0580350:CDS | 25.0% |
| ATTGCAGAATGTCTATTATG+AGG | - | chr4_1:85399685-85399704 | Msa0580350:CDS | 30.0% | |
| AATGTCTATTATGAGGATGA+TGG | - | chr4_1:85399692-85399711 | Msa0580350:CDS | 30.0% | |
| GACAGAAACATGTATAATCA+TGG | + | chr4_1:85399887-85399906 | None:intergenic | 30.0% | |
| !!! | TTTTGGTGTTAAACTAGCTT+TGG | - | chr4_1:85399935-85399954 | Msa0580350:intron | 30.0% |
| GTATTATGTACCTTGAAGTT+TGG | + | chr4_1:85400189-85400208 | None:intergenic | 30.0% | |
| ! | TGCAATTTTCCAAAACGTAA+AGG | + | chr4_1:85400352-85400371 | None:intergenic | 30.0% |
| AATGAGTCCTAAGAATTGTT+CGG | + | chr4_1:85400462-85400481 | None:intergenic | 30.0% | |
| AAACAATGGATACATTGACA+CGG | - | chr4_1:85400982-85401001 | Msa0580350:intron | 30.0% | |
| !! | TCCACAAAGGTATTTCTATA+GGG | - | chr4_1:85401139-85401158 | Msa0580350:intron | 30.0% |
| !!! | GTCCTTATTTTCATTGGTTT+TGG | - | chr4_1:85401268-85401287 | Msa0580350:intron | 30.0% |
| ATGATGTAAAATTATTGGCC+GGG | - | chr4_1:85401749-85401768 | Msa0580350:intron | 30.0% | |
| CGGGACTCATTTAAAAAAAA+TGG | - | chr4_1:85401768-85401787 | Msa0580350:intron | 30.0% | |
| TAAAAAAAATGGTGTGCATG+TGG | - | chr4_1:85401779-85401798 | Msa0580350:intron | 30.0% | |
| AAAAAAAATGGTGTGCATGT+GGG | - | chr4_1:85401780-85401799 | Msa0580350:intron | 30.0% | |
| !!! | GCATGTATGCTGTTTTATTA+AGG | - | chr4_1:85401972-85401991 | Msa0580350:intron | 30.0% |
| ATTAAGGAGAATTTCTTGCT+TGG | - | chr4_1:85401988-85402007 | Msa0580350:intron | 30.0% | |
| TTTCTTCATTATTGTGTGTG+TGG | - | chr4_1:85402066-85402085 | Msa0580350:intron | 30.0% | |
| !!! | GAAGTTAACATTTTTTCCAC+GGG | - | chr4_1:85402145-85402164 | Msa0580350:intron | 30.0% |
| AAACGAGCAAATTAAATGCA+TGG | + | chr4_1:85402236-85402255 | None:intergenic | 30.0% | |
| !! | TTTCTATAAGCTTTTAGGGA+TGG | - | chr4_1:85402260-85402279 | Msa0580350:intron | 30.0% |
| CTAAAAAGTAAGTCTATGAC+AGG | + | chr4_1:85402367-85402386 | None:intergenic | 30.0% | |
| !!! | CTGTCATAGACTTACTTTTT+AGG | - | chr4_1:85402365-85402384 | Msa0580350:intron | 30.0% |
| ! | CCTATTTAGCTTAATAAGTC+AGG | + | chr4_1:85402782-85402801 | None:intergenic | 30.0% |
| CCTGACTTATTAAGCTAAAT+AGG | - | chr4_1:85402779-85402798 | Msa0580350:intron | 30.0% | |
| !! | ATAGGCTTTTAAAAAAGCCT+AGG | - | chr4_1:85402797-85402816 | Msa0580350:intron | 30.0% |
| TTCTTAAATAGAGAAAGCCT+AGG | + | chr4_1:85402817-85402836 | None:intergenic | 30.0% | |
| ! | GCTTTATTCGTCTATTATGT+AGG | - | chr4_1:85402918-85402937 | Msa0580350:intron | 30.0% |
| TTTACAGAAATGACCTACTA+TGG | - | chr4_1:85403216-85403235 | Msa0580350:intron | 30.0% | |
| AATTAAAAACATACTCCCTC+CGG | - | chr4_1:85403424-85403443 | Msa0580350:intron | 30.0% | |
| TTGCTTATAATAATGACCGA+AGG | - | chr4_1:85403693-85403712 | Msa0580350:intron | 30.0% | |
| TGCTTATAATAATGACCGAA+GGG | - | chr4_1:85403694-85403713 | Msa0580350:intron | 30.0% | |
| ! | ATCATGAAGTACTACTCAAA+TGG | + | chr4_1:85403888-85403907 | None:intergenic | 30.0% |
| ACATGAAACCGTATTTGTAT+TGG | - | chr4_1:85403961-85403980 | Msa0580350:intron | 30.0% | |
| TTGTCTCTTATATAAGGGAT+CGG | + | chr4_1:85404055-85404074 | None:intergenic | 30.0% | |
| ! | GCTAGTTTGTCTCTTATATA+AGG | + | chr4_1:85404061-85404080 | None:intergenic | 30.0% |
| GATGTAGTGAAAAATAAGCA+AGG | + | chr4_1:85404120-85404139 | None:intergenic | 30.0% | |
| TACGAAATAGTATGAATGCT+AGG | + | chr4_1:85404212-85404231 | None:intergenic | 30.0% | |
| !!! | AATATTTTGGCCTCTCATAT+AGG | - | chr4_1:85404537-85404556 | Msa0580350:intron | 30.0% |
| TATTATGGTTCCTATATGAG+AGG | + | chr4_1:85404550-85404569 | None:intergenic | 30.0% | |
| ACATATTTACCAGGTGAAAT+AGG | - | chr4_1:85404747-85404766 | Msa0580350:intron | 30.0% | |
| CATATTTACCAGGTGAAATA+GGG | - | chr4_1:85404748-85404767 | Msa0580350:intron | 30.0% | |
| ATATTTACCAGGTGAAATAG+GGG | - | chr4_1:85404749-85404768 | Msa0580350:intron | 30.0% | |
| ! | GTTGGTAAATTGTGATAAGT+CGG | - | chr4_1:85404794-85404813 | Msa0580350:intron | 30.0% |
| CCATTGTCTGATATTACTAA+TGG | + | chr4_1:85404918-85404937 | None:intergenic | 30.0% | |
| CCATTAGTAATATCAGACAA+TGG | - | chr4_1:85404915-85404934 | Msa0580350:intron | 30.0% | |
| ! | CGACTTTTCAGTTTATTGTT+TGG | - | chr4_1:85405163-85405182 | Msa0580350:intron | 30.0% |
| CACTGTTATTAATTATGCAC+GGG | - | chr4_1:85405337-85405356 | Msa0580350:intron | 30.0% | |
| ACACTGTTATTACTACATCA+CGG | - | chr4_1:85405676-85405695 | Msa0580350:intron | 30.0% | |
| TGTTCGTTATATACATCCTT+GGG | + | chr4_1:85405819-85405838 | None:intergenic | 30.0% | |
| CGTTCAATTATGGTTGTTAT+AGG | - | chr4_1:85405961-85405980 | Msa0580350:intron | 30.0% | |
| GCAAGTATCAAAAATCAAGA+CGG | - | chr4_1:85405987-85406006 | Msa0580350:intron | 30.0% | |
| !! | AATTGAAGATTGGCTTCAAA+CGG | + | chr4_1:85406057-85406076 | None:intergenic | 30.0% |
| GTCACAGATTATTATTACAG+AGG | - | chr4_1:85406186-85406205 | Msa0580350:intron | 30.0% | |
| ! | ACAAAAAGCATAGTATGAGT+AGG | + | chr4_1:85406244-85406263 | None:intergenic | 30.0% |
| !!! | ATTATTTTGGCCTCTCATAT+AGG | - | chr4_1:85406353-85406372 | Msa0580350:intron | 30.0% |
| ATGAATTGGAACTGTAATGA+CGG | + | chr4_1:85406826-85406845 | None:intergenic | 30.0% | |
| !! | AATTGAAGGTTAGCTTCAAA+CGG | + | chr4_1:85406882-85406901 | None:intergenic | 30.0% |
| TTCATGTAGAAACACTTAGA+CGG | + | chr4_1:85406998-85407017 | None:intergenic | 30.0% | |
| ACTTATTGATGAGAGAACAA+TGG | + | chr4_1:85407141-85407160 | None:intergenic | 30.0% | |
| TGAGCAATAAGATAGATTGA+AGG | - | chr4_1:85407520-85407539 | Msa0580350:intron | 30.0% | |
| CAATAAGATAGATTGAAGGA+AGG | - | chr4_1:85407524-85407543 | Msa0580350:intron | 30.0% | |
| !! | AAGTCTTTTGAGTAGAACAA+AGG | + | chr4_1:85407557-85407576 | None:intergenic | 30.0% |
| !!! | ACACATTTTTTCTCACTCAT+TGG | + | chr4_1:85407758-85407777 | None:intergenic | 30.0% |
| AAAATGTGTACGATGAAGAA+AGG | - | chr4_1:85407769-85407788 | Msa0580350:intron | 30.0% | |
| AAAAAGTGGAAGTAAGATGA+AGG | - | chr4_1:85407904-85407923 | Msa0580350:intron | 30.0% | |
| ! | ATGAAGTAGGGTAATGTTTT+AGG | + | chr4_1:85408211-85408230 | None:intergenic | 30.0% |
| TTAATGAACGGTATGAAGTA+GGG | + | chr4_1:85408223-85408242 | None:intergenic | 30.0% | |
| ATTAATGAACGGTATGAAGT+AGG | + | chr4_1:85408224-85408243 | None:intergenic | 30.0% | |
| CATACCGTTCATTAATCATT+TGG | - | chr4_1:85408228-85408247 | Msa0580350:intron | 30.0% | |
| GATAAATGACACCATCTTAA+TGG | + | chr4_1:85408272-85408291 | None:intergenic | 30.0% | |
| !! | GGATGTAATGGGTATTATTA+AGG | - | chr4_1:85408513-85408532 | Msa0580350:intron | 30.0% |
| ! | AGTCTTAGTAATCTAGAGTT+CGG | + | chr4_1:85409198-85409217 | None:intergenic | 30.0% |
| ACTTGTAACATTCATCTTCT+TGG | + | chr4_1:85409264-85409283 | None:intergenic | 30.0% | |
| GAAATTTCGAACAAACAGTT+GGG | + | chr4_1:85409869-85409888 | None:intergenic | 30.0% | |
| AGAAATTTCGAACAAACAGT+TGG | + | chr4_1:85409870-85409889 | None:intergenic | 30.0% | |
| AACTGTTTGTTCGAAATTTC+TGG | - | chr4_1:85409869-85409888 | Msa0580350:intron | 30.0% | |
| AATTATCAAGACTACTTGGA+TGG | + | chr4_1:85409901-85409920 | None:intergenic | 30.0% | |
| ! | TCCAAGTAGTCTTGATAATT+TGG | - | chr4_1:85409901-85409920 | Msa0580350:intron | 30.0% |
| TCCAAATTATCAAGACTACT+TGG | + | chr4_1:85409905-85409924 | None:intergenic | 30.0% | |
| ! | GTCTTGATAATTTGGAACAA+CGG | - | chr4_1:85409909-85409928 | Msa0580350:intron | 30.0% |
| AGTAGGAAAATAAATAAGCG+TGG | + | chr4_1:85409938-85409957 | None:intergenic | 30.0% | |
| AAACAACAAAGTAGACATGA+AGG | + | chr4_1:85410211-85410230 | None:intergenic | 30.0% | |
| TTTCAAATAGAACATCGTTG+AGG | - | chr4_1:85410304-85410323 | Msa0580350:intron | 30.0% | |
| TTCAAATAGAACATCGTTGA+GGG | - | chr4_1:85410305-85410324 | Msa0580350:intron | 30.0% | |
| ! | TTGGTCGAGATATTTGTTAA+AGG | - | chr4_1:85410545-85410564 | Msa0580350:intron | 30.0% |
| !! | TTCTCAATTCTTGATAATGG+TGG | - | chr4_1:85410906-85410925 | Msa0580350:intron | 30.0% |
| TTTGAACACGTGTTTATAAG+TGG | - | chr4_1:85411000-85411019 | Msa0580350:intron | 30.0% | |
| TTGAACACGTGTTTATAAGT+GGG | - | chr4_1:85411001-85411020 | Msa0580350:intron | 30.0% | |
| !!! | GGAGATTCTCTACTTTTTTT+GGG | + | chr4_1:85411355-85411374 | None:intergenic | 30.0% |
| !! | ACATTATCTCACTTTTCTTC+TGG | - | chr4_1:85411398-85411417 | Msa0580350:intron | 30.0% |
| !! | CATTATCTCACTTTTCTTCT+GGG | - | chr4_1:85411399-85411418 | Msa0580350:intron | 30.0% |
| TTGAATTTATTAATCAGCGC+CGG | + | chr4_1:85411482-85411501 | None:intergenic | 30.0% | |
| !!! | TTGGTTTATTTTGGTGATAC+GGG | + | chr4_1:85411572-85411591 | None:intergenic | 30.0% |
| TTGACAGAAACATGTTTCTT+GGG | + | chr4_1:85411863-85411882 | None:intergenic | 30.0% | |
| !! | TTTGGTGTTAAATTCACTGT+AGG | - | chr4_1:85411913-85411932 | Msa0580350:intron | 30.0% |
| !! | TTGGTGTTAAATTCACTGTA+GGG | - | chr4_1:85411914-85411933 | Msa0580350:intron | 30.0% |
| TGGTACTTGAAATTAAAACG+CGG | - | chr4_1:85411987-85412006 | Msa0580350:intron | 30.0% | |
| GTAGATAAAGACTTGTGATA+TGG | + | chr4_1:85412086-85412105 | None:intergenic | 30.0% | |
| ACCACTTAAGTAACACAAAA+TGG | - | chr4_1:85412279-85412298 | Msa0580350:CDS | 30.0% | |
| !!! | ACCATTTTGTGTTACTTAAG+TGG | + | chr4_1:85412283-85412302 | None:intergenic | 30.0% |
| ! | CATTTGCTGCAATCCAATTA+AGG | - | chr4_1:85399845-85399864 | Msa0580350:intron | 35.0% |
| TTCTGTCAAATTTCAGTTCC+TGG | - | chr4_1:85399900-85399919 | Msa0580350:intron | 35.0% | |
| ! | TAACACCAAAACTTTCGAGT+AGG | + | chr4_1:85399926-85399945 | None:intergenic | 35.0% |
| GTCAAAGTTGTTAACTCATG+TGG | - | chr4_1:85399960-85399979 | Msa0580350:intron | 35.0% | |
| ACACAATAGCATATGAAGCT+TGG | - | chr4_1:85400056-85400075 | Msa0580350:intron | 35.0% | |
| ! | TTGAAGTTTGGTGAGATACT+TGG | + | chr4_1:85400177-85400196 | None:intergenic | 35.0% |
| AAGTATCTCACCAAACTTCA+AGG | - | chr4_1:85400176-85400195 | Msa0580350:intron | 35.0% | |
| GGACATCAATGCTTTAGTTA+AGG | + | chr4_1:85400290-85400309 | None:intergenic | 35.0% | |
| ! | AAATTGAGAGGCTTTTTACC+TGG | + | chr4_1:85400414-85400433 | None:intergenic | 35.0% |
| AAAGACAGAGAGAAATTGAG+AGG | + | chr4_1:85400426-85400445 | None:intergenic | 35.0% | |
| TTACTTACAAAGTGACACAC+CGG | - | chr4_1:85400699-85400718 | Msa0580350:intron | 35.0% | |
| !! | CTCCACAAAGGTATTTCTAT+AGG | - | chr4_1:85401138-85401157 | Msa0580350:intron | 35.0% |
| TCCCTATAGAAATACCTTTG+TGG | + | chr4_1:85401143-85401162 | None:intergenic | 35.0% | |
| !! | TGGAAAGTATTGCTAGTGTT+AGG | - | chr4_1:85401514-85401533 | Msa0580350:intron | 35.0% |
| TCGTAAAAACTCAGGATCAT+TGG | + | chr4_1:85401870-85401889 | None:intergenic | 35.0% | |
| CTGCAAATTCGTAAAAACTC+AGG | + | chr4_1:85401878-85401897 | None:intergenic | 35.0% | |
| ACTTCTTGATCTTAACGAAG+AGG | + | chr4_1:85402130-85402149 | None:intergenic | 35.0% | |
| !! | AAGCTTTTAGGGATGGAAAT+AGG | - | chr4_1:85402267-85402286 | Msa0580350:intron | 35.0% |
| TTTAGGGATGGAAATAGGTT+AGG | - | chr4_1:85402272-85402291 | Msa0580350:intron | 35.0% | |
| GCTTAGGCCTTCAAAAAAAT+TGG | + | chr4_1:85402333-85402352 | None:intergenic | 35.0% | |
| ! | AGACTTTTAAACAGGCTAGT+AGG | + | chr4_1:85402423-85402442 | None:intergenic | 35.0% |
| CGAATAAAGCTTATAGGGAT+GGG | + | chr4_1:85402908-85402927 | None:intergenic | 35.0% | |
| ACGAATAAAGCTTATAGGGA+TGG | + | chr4_1:85402909-85402928 | None:intergenic | 35.0% | |
| ! | CTCACCAAATTCATTTTGTC+TGG | - | chr4_1:85403253-85403272 | Msa0580350:intron | 35.0% |
| AACTTCTATAGGTTAAGGCT+TGG | + | chr4_1:85403333-85403352 | None:intergenic | 35.0% | |
| AAGGTTCGTCATTAACAAGT+TGG | - | chr4_1:85403385-85403404 | Msa0580350:intron | 35.0% | |
| !! | GGTGATATTGAAGCATTGAT+TGG | + | chr4_1:85403790-85403809 | None:intergenic | 35.0% |
| CTTTGATCTACTCAAGATCA+TGG | + | chr4_1:85403814-85403833 | None:intergenic | 35.0% | |
| CATGATCTTGAGTAGATCAA+AGG | - | chr4_1:85403812-85403831 | Msa0580350:intron | 35.0% | |
| TATGGACTTCAAAGCTAAGA+AGG | + | chr4_1:85403933-85403952 | None:intergenic | 35.0% | |
| ! | GGTTTCATGTCTAGAGTATA+TGG | + | chr4_1:85403951-85403970 | None:intergenic | 35.0% |
| ! | ATTGCGAGAATGAAGAGTAT+TGG | + | chr4_1:85403990-85404009 | None:intergenic | 35.0% |
| TTCATTCTCGCAATTACTCA+TGG | - | chr4_1:85403996-85404015 | Msa0580350:intron | 35.0% | |
| !! | GCTTATTTTTCACTACATCC+AGG | - | chr4_1:85404121-85404140 | Msa0580350:intron | 35.0% |
| TTGTCGAATCTCTATGACAT+GGG | + | chr4_1:85404240-85404259 | None:intergenic | 35.0% | |
| TTTGTCGAATCTCTATGACA+TGG | + | chr4_1:85404241-85404260 | None:intergenic | 35.0% | |
| ! | GATTCGACAAAGTTTTACGT+TGG | - | chr4_1:85404250-85404269 | Msa0580350:intron | 35.0% |
| AACTTACCCAATTCATTGTC+AGG | - | chr4_1:85404606-85404625 | Msa0580350:intron | 35.0% | |
| TAAACAAAGCAACCATAACC+GGG | + | chr4_1:85404692-85404711 | None:intergenic | 35.0% | |
| CTAAACAAAGCAACCATAAC+CGG | + | chr4_1:85404693-85404712 | None:intergenic | 35.0% | |
| TCACTGCAATTCAAATTTCC+AGG | - | chr4_1:85404714-85404733 | Msa0580350:intron | 35.0% | |
| !! | AAATATGTTCTAAAGCGTCC+TGG | + | chr4_1:85404735-85404754 | None:intergenic | 35.0% |
| !! | CGCTTTAGAACATATTTACC+AGG | - | chr4_1:85404738-85404757 | Msa0580350:intron | 35.0% |
| CTTTCTTGTCACATTTCTGT+TGG | - | chr4_1:85404776-85404795 | Msa0580350:intron | 35.0% | |
| GATAGAACCATATGCAGAAA+AGG | - | chr4_1:85404884-85404903 | Msa0580350:intron | 35.0% | |
| ! | ACTCATACCTTTTCTGCATA+TGG | + | chr4_1:85404894-85404913 | None:intergenic | 35.0% |
| ACTTCTCTGAACATTCTCAT+TGG | + | chr4_1:85405127-85405146 | None:intergenic | 35.0% | |
| !! | TCAGTTTATTGTTTGGCTCT+AGG | - | chr4_1:85405170-85405189 | Msa0580350:intron | 35.0% |
| CACACAAATGTCGTCATTTA+CGG | + | chr4_1:85405235-85405254 | None:intergenic | 35.0% | |
| TAATTATGCACGGGATACAA+AGG | - | chr4_1:85405346-85405365 | Msa0580350:intron | 35.0% | |
| ! | GGTCGTTTAACCTTTGTTAT+TGG | + | chr4_1:85405561-85405580 | None:intergenic | 35.0% |
| !! | GTCTGTTCGTTGATAATTGT+TGG | + | chr4_1:85405627-85405646 | None:intergenic | 35.0% |
| CACTGTTATTACTACATCAC+GGG | - | chr4_1:85405677-85405696 | Msa0580350:intron | 35.0% | |
| ACTATTGAGAGGTTGAACTT+GGG | + | chr4_1:85405737-85405756 | None:intergenic | 35.0% | |
| AACTATTGAGAGGTTGAACT+TGG | + | chr4_1:85405738-85405757 | None:intergenic | 35.0% | |
| CCAATGCATTAACTATTGAG+AGG | + | chr4_1:85405748-85405767 | None:intergenic | 35.0% | |
| CCTCTCAATAGTTAATGCAT+TGG | - | chr4_1:85405745-85405764 | Msa0580350:intron | 35.0% | |
| CTGTTCGTTATATACATCCT+TGG | + | chr4_1:85405820-85405839 | None:intergenic | 35.0% | |
| AAAAGGTCTCCGTTCAATTA+TGG | - | chr4_1:85405951-85405970 | Msa0580350:intron | 35.0% | |
| AACTTACCCAAATCATTGTC+AGG | - | chr4_1:85406422-85406441 | Msa0580350:intron | 35.0% | |
| GATGTTCCTGACAATGATTT+GGG | + | chr4_1:85406431-85406450 | None:intergenic | 35.0% | |
| TGATGTTCCTGACAATGATT+TGG | + | chr4_1:85406432-85406451 | None:intergenic | 35.0% | |
| CTTTCTTGTCACATTTCTGT+TGG | - | chr4_1:85404776-85404795 | Msa0580350:intron | 35.0% | |
| ! | GTTGGTAAATTGTGACAAGT+CGG | - | chr4_1:85406610-85406629 | Msa0580350:intron | 35.0% |
| TTTCTCATGCAATGCTTTGA+TGG | - | chr4_1:85407076-85407095 | Msa0580350:intron | 35.0% | |
| ! | TTCATGATTTTTACCCCTTC+AGG | - | chr4_1:85407327-85407346 | Msa0580350:intron | 35.0% |
| CCATATATAGTAGGCATACA+CGG | - | chr4_1:85408163-85408182 | Msa0580350:intron | 35.0% | |
| AGGCAATTCATGTGACATTT+AGG | + | chr4_1:85408450-85408469 | None:intergenic | 35.0% | |
| CTTACTCTAGCCCAAAAAAA+CGG | - | chr4_1:85408492-85408511 | Msa0580350:intron | 35.0% | |
| !!! | CCCATTACATCCGTTTTTTT+GGG | + | chr4_1:85408505-85408524 | None:intergenic | 35.0% |
| CCCAAAAAAACGGATGTAAT+GGG | - | chr4_1:85408502-85408521 | Msa0580350:intron | 35.0% | |
| !!! | ACCCATTACATCCGTTTTTT+TGG | + | chr4_1:85408506-85408525 | None:intergenic | 35.0% |
| ! | AGTGCATTGGTAATCATACA+AGG | - | chr4_1:85408629-85408648 | Msa0580350:intron | 35.0% |
| GTAATCATACAAGGTAGAGT+GGG | - | chr4_1:85408638-85408657 | Msa0580350:intron | 35.0% | |
| ! | TTTTAATGGAACGCTTGTCA+TGG | - | chr4_1:85408702-85408721 | Msa0580350:intron | 35.0% |
| CATGCAATGGATAACTAATG+AGG | + | chr4_1:85408787-85408806 | None:intergenic | 35.0% | |
| !!! | GTGATTTTTTGCTTTGATCC+TGG | + | chr4_1:85408843-85408862 | None:intergenic | 35.0% |
| AGCAAAAAATCACCATCTGA+CGG | - | chr4_1:85408850-85408869 | Msa0580350:intron | 35.0% | |
| ! | TAATCTAGAGTTCGGTTATG+AGG | + | chr4_1:85409190-85409209 | None:intergenic | 35.0% |
| ! | TCTACTTGCTGCCAATTATA+CGG | - | chr4_1:85410151-85410170 | Msa0580350:intron | 35.0% |
| AAAGTAGACATGAAGGTTGT+TGG | + | chr4_1:85410204-85410223 | None:intergenic | 35.0% | |
| ATAATAGCCAATCTCGTGTA+AGG | + | chr4_1:85410267-85410286 | None:intergenic | 35.0% | |
| GATTGAAAATTACTCTTGGC+CGG | + | chr4_1:85410387-85410406 | None:intergenic | 35.0% | |
| AAAATTTCACAACAGAAGCG+TGG | - | chr4_1:85410481-85410500 | Msa0580350:intron | 35.0% | |
| ATACTACTTGTGAGCTTTCT+TGG | - | chr4_1:85410526-85410545 | Msa0580350:intron | 35.0% | |
| ! | ACAAAACAATTTTGCCAGCT+CGG | + | chr4_1:85410589-85410608 | None:intergenic | 35.0% |
| !! | ACATTCACGCTTTAACTTGA+GGG | - | chr4_1:85410814-85410833 | Msa0580350:intron | 35.0% |
| AGTGCATAATAGAATGTGTG+AGG | - | chr4_1:85410866-85410885 | Msa0580350:intron | 35.0% | |
| TGAACACGTGTTTATAAGTG+GGG | - | chr4_1:85411002-85411021 | Msa0580350:intron | 35.0% | |
| !!! | GGGAGATTCTCTACTTTTTT+TGG | + | chr4_1:85411356-85411375 | None:intergenic | 35.0% |
| !!! | ATTGATGCAGGGCTATTTTT+GGG | + | chr4_1:85411377-85411396 | None:intergenic | 35.0% |
| GAGATAATGTGATTGATGCA+GGG | + | chr4_1:85411388-85411407 | None:intergenic | 35.0% | |
| TGAGATAATGTGATTGATGC+AGG | + | chr4_1:85411389-85411408 | None:intergenic | 35.0% | |
| ATAAACCTTTCACTGAAGCA+AGG | - | chr4_1:85411513-85411532 | Msa0580350:intron | 35.0% | |
| TATTTCCTTGCTTCAGTGAA+AGG | + | chr4_1:85411521-85411540 | None:intergenic | 35.0% | |
| ACATTTCGACATAGGAAAAG+TGG | - | chr4_1:85411614-85411633 | Msa0580350:intron | 35.0% | |
| TACTCAATGCATGGCAATAA+CGG | + | chr4_1:85411757-85411776 | None:intergenic | 35.0% | |
| GTTGACAGAAACATGTTTCT+TGG | + | chr4_1:85411864-85411883 | None:intergenic | 35.0% | |
| CCAAAAGCTTCAAATAAACC+AGG | + | chr4_1:85411898-85411917 | None:intergenic | 35.0% | |
| !! | CCTGGTTTATTTGAAGCTTT+TGG | - | chr4_1:85411895-85411914 | Msa0580350:intron | 35.0% |
| AAATTTAGAGGTTCTACCTG+GGG | + | chr4_1:85412210-85412229 | None:intergenic | 35.0% | |
| GAAATTTAGAGGTTCTACCT+GGG | + | chr4_1:85412211-85412230 | None:intergenic | 35.0% | |
| TGAAATTTAGAGGTTCTACC+TGG | + | chr4_1:85412212-85412231 | None:intergenic | 35.0% | |
| ! | GTCTATTATGAGGATGATGG+TGG | - | chr4_1:85399695-85399714 | Msa0580350:CDS | 40.0% |
| !! | TTATGAGGATGATGGTGGTT+TGG | - | chr4_1:85399700-85399719 | Msa0580350:CDS | 40.0% |
| AACATCTTATCACCAGCACA+AGG | + | chr4_1:85399786-85399805 | None:intergenic | 40.0% | |
| ATTGGATTGCAGCAAATGTC+TGG | + | chr4_1:85399843-85399862 | None:intergenic | 40.0% | |
| TAATATGGTACCTTTGCAGG+AGG | + | chr4_1:85400003-85400022 | None:intergenic | 40.0% | |
| GAGTAATATGGTACCTTTGC+AGG | + | chr4_1:85400006-85400025 | None:intergenic | 40.0% | |
| AAAATTGCAGCTTCTTCTCC+AGG | - | chr4_1:85400363-85400382 | Msa0580350:CDS | 40.0% | |
| GGGATTACCGAACAATTCTT+AGG | - | chr4_1:85400452-85400471 | Msa0580350:CDS | 40.0% | |
| AAAGAAAACTACTCAGCCAC+CGG | + | chr4_1:85400721-85400740 | None:intergenic | 40.0% | |
| CATAAATATGGGCTCCACAA+AGG | - | chr4_1:85401126-85401145 | Msa0580350:intron | 40.0% | |
| TATGAAGTAGTGTCCAGTGA+AGG | + | chr4_1:85401940-85401959 | None:intergenic | 40.0% | |
| TTCAAAAAAATTGGCAGGCC+AGG | + | chr4_1:85402324-85402343 | None:intergenic | 40.0% | |
| !!! | TGGCCTGCCAATTTTTTTGA+AGG | - | chr4_1:85402323-85402342 | Msa0580350:intron | 40.0% |
| AGGCCTTCAAAAAAATTGGC+AGG | + | chr4_1:85402329-85402348 | None:intergenic | 40.0% | |
| !!! | TTACTTTTTAGGCCTGAACC+TGG | - | chr4_1:85402376-85402395 | Msa0580350:intron | 40.0% |
| AAAAGCCTCTTAGGCCTATT+AGG | + | chr4_1:85402745-85402764 | None:intergenic | 40.0% | |
| GGTCATTCAAAAAGCCTCTT+AGG | + | chr4_1:85402754-85402773 | None:intergenic | 40.0% | |
| AGCTTAATAAGTCAGGTCAC+AGG | + | chr4_1:85402775-85402794 | None:intergenic | 40.0% | |
| AAGCTTATAGGGATGGGAAT+AGG | + | chr4_1:85402902-85402921 | None:intergenic | 40.0% | |
| !! | ACAAGTTGGTCAATCCATGT+TGG | - | chr4_1:85403399-85403418 | Msa0580350:intron | 40.0% |
| TGCTTATAATAGTGACCGGA+GGG | + | chr4_1:85403578-85403597 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr4_1:85403577-85403596 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr4_1:85403577-85403596 | Msa0580350:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr4_1:85403578-85403597 | Msa0580350:intron | 40.0% | |
| ! | ACTTTTGCTTATACTCCCTC+CGG | + | chr4_1:85403596-85403615 | None:intergenic | 40.0% |
| TGATCTACTCAAGATCATGG+TGG | + | chr4_1:85403811-85403830 | None:intergenic | 40.0% | |
| CTCTTATATAAGGGATCGGA+TGG | + | chr4_1:85404051-85404070 | None:intergenic | 40.0% | |
| AGTACAGTGTCAAATGAGCA+AGG | + | chr4_1:85404156-85404175 | None:intergenic | 40.0% | |
| TAAAAGGAGAGGGTTGTGTT+AGG | + | chr4_1:85404285-85404304 | None:intergenic | 40.0% | |
| AATGTATATGACCCATGCCA+AGG | + | chr4_1:85404325-85404344 | None:intergenic | 40.0% | |
| GACGTTCCTGACAATGAATT+GGG | + | chr4_1:85404615-85404634 | None:intergenic | 40.0% | |
| TGACGTTCCTGACAATGAAT+TGG | + | chr4_1:85404616-85404635 | None:intergenic | 40.0% | |
| ! | TATCTAGAGTGTGACGAGAA+TGG | + | chr4_1:85404648-85404667 | None:intergenic | 40.0% |
| !! | CGGTTATGGTTGCTTTGTTT+AGG | - | chr4_1:85404691-85404710 | Msa0580350:intron | 40.0% |
| ! | AACAAGAAGCGTAGAGTTCA+TGG | + | chr4_1:85404951-85404970 | None:intergenic | 40.0% |
| ATGAACTCTACGCTTCTTGT+TGG | - | chr4_1:85404950-85404969 | Msa0580350:intron | 40.0% | |
| TGAACTCTACGCTTCTTGTT+GGG | - | chr4_1:85404951-85404970 | Msa0580350:intron | 40.0% | |
| TCATTGGCAGCCTAAGATTA+GGG | + | chr4_1:85405111-85405130 | None:intergenic | 40.0% | |
| GTCTCTTCATTAAACCGTGT+TGG | + | chr4_1:85405297-85405316 | None:intergenic | 40.0% | |
| GAGACACGATAATCAATTCG+CGG | - | chr4_1:85405312-85405331 | Msa0580350:intron | 40.0% | |
| CAGTCTGTTCATATGTTGCT+TGG | - | chr4_1:85405474-85405493 | Msa0580350:intron | 40.0% | |
| TCTGTTCACACGTTAGTAGA+TGG | + | chr4_1:85405582-85405601 | None:intergenic | 40.0% | |
| ACGAACAGACGCACATAATA+TGG | - | chr4_1:85405637-85405656 | Msa0580350:intron | 40.0% | |
| GTTATTACTACATCACGGGA+TGG | - | chr4_1:85405681-85405700 | Msa0580350:intron | 40.0% | |
| CTATTGAGAGGTTGAACTTG+GGG | + | chr4_1:85405736-85405755 | None:intergenic | 40.0% | |
| ATACATCCTTGGGTGATGTT+TGG | + | chr4_1:85405809-85405828 | None:intergenic | 40.0% | |
| GGTGGTATATAGCAGAAGTT+TGG | - | chr4_1:85406091-85406110 | Msa0580350:intron | 40.0% | |
| ! | TATCTAGAGTGTGACGAGAA+TGG | + | chr4_1:85404648-85404667 | None:intergenic | 40.0% |
| GCTTTGATTCTCATTTGACC+CGG | - | chr4_1:85406487-85406506 | Msa0580350:intron | 40.0% | |
| ATTCTCATTTGACCCGGTTA+CGG | - | chr4_1:85406493-85406512 | Msa0580350:intron | 40.0% | |
| TAAACAAAGCAACCGTAACC+GGG | + | chr4_1:85406508-85406527 | None:intergenic | 40.0% | |
| CTAAACAAAGCAACCGTAAC+CGG | + | chr4_1:85406509-85406528 | None:intergenic | 40.0% | |
| TCACCGCAATGCAAATTTCT+AGG | - | chr4_1:85406530-85406549 | Msa0580350:intron | 40.0% | |
| CGTCCTAGAAATTTGCATTG+CGG | + | chr4_1:85406536-85406555 | None:intergenic | 40.0% | |
| ACGTATCTACCAGGTGAAAT+AGG | - | chr4_1:85406563-85406582 | Msa0580350:intron | 40.0% | |
| CGTATCTACCAGGTGAAATA+GGG | - | chr4_1:85406564-85406583 | Msa0580350:intron | 40.0% | |
| GTATCTACCAGGTGAAATAG+GGG | - | chr4_1:85406565-85406584 | Msa0580350:intron | 40.0% | |
| GGTGGTATATAGCAGAAGTT+TGG | - | chr4_1:85406091-85406110 | Msa0580350:intron | 40.0% | |
| GAACAATGGACACTTTCCTA+AGG | + | chr4_1:85407127-85407146 | None:intergenic | 40.0% | |
| TCATTGTCAGAGAGCAACAT+TGG | - | chr4_1:85407190-85407209 | Msa0580350:intron | 40.0% | |
| AACTGATGTAACTGCCTGAA+GGG | + | chr4_1:85407344-85407363 | None:intergenic | 40.0% | |
| AAGTGGAAGTAAGATGAAGG+AGG | - | chr4_1:85407907-85407926 | Msa0580350:intron | 40.0% | |
| AAGTAAGATGAAGGAGGAGA+GGG | - | chr4_1:85407913-85407932 | Msa0580350:intron | 40.0% | |
| CCGTGTATGCCTACTATATA+TGG | + | chr4_1:85408166-85408185 | None:intergenic | 40.0% | |
| TGTCACATGAATTGCCTTCA+AGG | - | chr4_1:85408453-85408472 | Msa0580350:intron | 40.0% | |
| GCCCAAAAAAACGGATGTAA+TGG | - | chr4_1:85408501-85408520 | Msa0580350:intron | 40.0% | |
| ! | TTCTAGGAAGTGAAGTGCAT+TGG | - | chr4_1:85408616-85408635 | Msa0580350:intron | 40.0% |
| GGTAATCATACAAGGTAGAG+TGG | - | chr4_1:85408637-85408656 | Msa0580350:intron | 40.0% | |
| AGCGCAAAAAATCAAAGTCC+AGG | - | chr4_1:85408822-85408841 | Msa0580350:intron | 40.0% | |
| GAGAGAATAGCGAGAATAGA+TGG | - | chr4_1:85408874-85408893 | Msa0580350:intron | 40.0% | |
| ! | AGAATAGATGGTAGTGCACA+GGG | - | chr4_1:85408886-85408905 | Msa0580350:intron | 40.0% |
| ATAGTGAAAGATCCCGAATG+AGG | + | chr4_1:85408923-85408942 | None:intergenic | 40.0% | |
| GACTTTATTCCCCTTGAAAC+CGG | - | chr4_1:85409214-85409233 | Msa0580350:intron | 40.0% | |
| ATCAAGACTACTTGGATGGA+CGG | + | chr4_1:85409897-85409916 | None:intergenic | 40.0% | |
| ! | CTACTTGCTGCCAATTATAC+GGG | - | chr4_1:85410152-85410171 | Msa0580350:intron | 40.0% |
| GCAAAGTAGACCCGTATAAT+TGG | + | chr4_1:85410165-85410184 | None:intergenic | 40.0% | |
| TATACGGGTCTACTTTGCAT+TGG | - | chr4_1:85410167-85410186 | Msa0580350:intron | 40.0% | |
| ! | ATGAAGGTTGTTGGCACTTT+TGG | + | chr4_1:85410195-85410214 | None:intergenic | 40.0% |
| TGCACCAAATAAGCTTTCCT+TGG | - | chr4_1:85410230-85410249 | Msa0580350:intron | 40.0% | |
| AAGGCCAAGGAAAGCTTATT+TGG | + | chr4_1:85410237-85410256 | None:intergenic | 40.0% | |
| ! | AATAAGCTTTCCTTGGCCTT+TGG | - | chr4_1:85410237-85410256 | Msa0580350:intron | 40.0% |
| ! | ATAAGCTTTCCTTGGCCTTT+GGG | - | chr4_1:85410238-85410257 | Msa0580350:intron | 40.0% |
| ! | CAAAACAATTTTGCCAGCTC+GGG | + | chr4_1:85410588-85410607 | None:intergenic | 40.0% |
| TTATCCGCTCAAGCTAAACT+GGG | + | chr4_1:85410639-85410658 | None:intergenic | 40.0% | |
| !! | GACATTCACGCTTTAACTTG+AGG | - | chr4_1:85410813-85410832 | Msa0580350:intron | 40.0% |
| !! | CATTCACGCTTTAACTTGAG+GGG | - | chr4_1:85410815-85410834 | Msa0580350:intron | 40.0% |
| !! | ATTCACGCTTTAACTTGAGG+GGG | - | chr4_1:85410816-85410835 | Msa0580350:intron | 40.0% |
| GAACACGTGTTTATAAGTGG+GGG | - | chr4_1:85411003-85411022 | Msa0580350:intron | 40.0% | |
| !!! | TTGATGCAGGGCTATTTTTG+GGG | + | chr4_1:85411376-85411395 | None:intergenic | 40.0% |
| !! | GATTGATGCAGGGCTATTTT+TGG | + | chr4_1:85411378-85411397 | None:intergenic | 40.0% |
| GACTCTTTCCTGAATTGCTT+TGG | + | chr4_1:85411458-85411477 | None:intergenic | 40.0% | |
| !!! | TTATTTTGGTGATACGGGTC+CGG | + | chr4_1:85411567-85411586 | None:intergenic | 40.0% |
| !! | ATTTCTGGTGGGTAAATGTC+TGG | + | chr4_1:85411805-85411824 | None:intergenic | 40.0% |
| TTCAATACCAGCTTCTGCAA+TGG | - | chr4_1:85411967-85411986 | Msa0580350:intron | 40.0% | |
| AAGACTTGTGATATGGCACA+TGG | + | chr4_1:85412079-85412098 | None:intergenic | 40.0% | |
| AATTTAGAGGTTCTACCTGG+GGG | + | chr4_1:85412209-85412228 | None:intergenic | 40.0% | |
| AAGAAGATTGCGAACTGCTA+AGG | + | chr4_1:85412307-85412326 | None:intergenic | 40.0% | |
| !! | CTATAGGTGTTGCTGCAAAT+TGG | + | chr4_1:85412439-85412458 | None:intergenic | 40.0% |
| CAATTTGCAGCAACACCTAT+AGG | - | chr4_1:85412437-85412456 | Msa0580350:CDS | 40.0% | |
| ATCTTATCACCAGCACAAGG+TGG | + | chr4_1:85399783-85399802 | None:intergenic | 45.0% | |
| GAATTGAGGTAGTCTGTGCA+TGG | + | chr4_1:85399810-85399829 | None:intergenic | 45.0% | |
| ! | AGCAATGATGGAGAAAGACC+TGG | + | chr4_1:85400384-85400403 | None:intergenic | 45.0% |
| ! | TTGAGAGGCTTTTTACCTGG+AGG | + | chr4_1:85400411-85400430 | None:intergenic | 45.0% |
| TACGAATTTGCAGCAACACG+TGG | - | chr4_1:85401885-85401904 | Msa0580350:intron | 45.0% | |
| CTTAAATAGGCCGGCCTAAT+AGG | - | chr4_1:85402728-85402747 | Msa0580350:intron | 45.0% | |
| TATAGGGATGGGAATAGGTC+AGG | + | chr4_1:85402897-85402916 | None:intergenic | 45.0% | |
| ! | TTGTAGGAGCATACTCCCTT+CGG | + | chr4_1:85403712-85403731 | None:intergenic | 45.0% |
| ! | CCAAACAAGGAAAGCCTTGT+AGG | + | chr4_1:85403728-85403747 | None:intergenic | 45.0% |
| CCTACAAGGCTTTCCTTGTT+TGG | - | chr4_1:85403725-85403744 | Msa0580350:intron | 45.0% | |
| TTTGACGTGCGTACCAAACA+AGG | + | chr4_1:85403741-85403760 | None:intergenic | 45.0% | |
| !! | AAGTTTTACGTTGGCTGTCG+AGG | - | chr4_1:85404259-85404278 | Msa0580350:intron | 45.0% |
| AAGCTTACCCCTATTTCACC+TGG | + | chr4_1:85404759-85404778 | None:intergenic | 45.0% | |
| GAACTCTACGCTTCTTGTTG+GGG | - | chr4_1:85404952-85404971 | Msa0580350:intron | 45.0% | |
| CTCATTGGCAGCCTAAGATT+AGG | + | chr4_1:85405112-85405131 | None:intergenic | 45.0% | |
| CTTTGTACCATGTGCACTCA+TGG | + | chr4_1:85405274-85405293 | None:intergenic | 45.0% | |
| CACATGGTACAAAGCCAACA+CGG | - | chr4_1:85405280-85405299 | Msa0580350:intron | 45.0% | |
| ! | GTGATGTTTGGTGATCACGA+GGG | + | chr4_1:85405797-85405816 | None:intergenic | 45.0% |
| TGATCACCAAACATCACCCA+AGG | - | chr4_1:85405800-85405819 | Msa0580350:intron | 45.0% | |
| !!! | CGTGACGTCGTTAGTTTTGA+TGG | - | chr4_1:85405871-85405890 | Msa0580350:intron | 45.0% |
| !! | CGGTTACGGTTGCTTTGTTT+AGG | - | chr4_1:85406507-85406526 | Msa0580350:intron | 45.0% |
| !! | CGCTTTAGAACGTATCTACC+AGG | - | chr4_1:85406554-85406573 | Msa0580350:intron | 45.0% |
| AAGCTTACCCCTATTTCACC+TGG | + | chr4_1:85404759-85404778 | None:intergenic | 45.0% | |
| TCAATAAGACCATTCGAGCG+AGG | - | chr4_1:85406971-85406990 | Msa0580350:intron | 45.0% | |
| TTGCGATCATCAGCTACCTT+AGG | - | chr4_1:85407108-85407127 | Msa0580350:intron | 45.0% | |
| ACTGATGTAACTGCCTGAAG+GGG | + | chr4_1:85407343-85407362 | None:intergenic | 45.0% | |
| GAACTGATGTAACTGCCTGA+AGG | + | chr4_1:85407345-85407364 | None:intergenic | 45.0% | |
| GAAGTAAGATGAAGGAGGAG+AGG | - | chr4_1:85407912-85407931 | Msa0580350:intron | 45.0% | |
| GACGTAGAGTTCTGTCAAAC+TGG | + | chr4_1:85407943-85407962 | None:intergenic | 45.0% | |
| TCGTTTGGTTGAAGCCTTGA+AGG | + | chr4_1:85408470-85408489 | None:intergenic | 45.0% | |
| GGGCTAGAGTAAGTTTCGTT+TGG | + | chr4_1:85408485-85408504 | None:intergenic | 45.0% | |
| ! | GAGAATAGATGGTAGTGCAC+AGG | - | chr4_1:85408885-85408904 | Msa0580350:intron | 45.0% |
| TTTATTCCCCTTGAAACCGG+AGG | - | chr4_1:85409217-85409236 | Msa0580350:intron | 45.0% | |
| TTATTCCCCTTGAAACCGGA+GGG | - | chr4_1:85409218-85409237 | Msa0580350:intron | 45.0% | |
| TGTTAACCCTCCGGTTTCAA+GGG | + | chr4_1:85409227-85409246 | None:intergenic | 45.0% | |
| CTTTGTGTGTGTTAACCCTC+CGG | + | chr4_1:85409236-85409255 | None:intergenic | 45.0% | |
| TCAAGACTACTTGGATGGAC+GGG | + | chr4_1:85409896-85409915 | None:intergenic | 45.0% | |
| !! | AGGGACTGTTGCTTTGCTTA+TGG | - | chr4_1:85410095-85410114 | Msa0580350:intron | 45.0% |
| CTCATTCAAGCCAATACTCG+CGG | - | chr4_1:85410338-85410357 | Msa0580350:intron | 45.0% | |
| TCGCGGCATCCATATGTTAT+AGG | - | chr4_1:85410355-85410374 | Msa0580350:intron | 45.0% | |
| CATATGTTATAGGCCTCGAC+CGG | - | chr4_1:85410365-85410384 | Msa0580350:intron | 45.0% | |
| GAATAAGGGCCAAGAAACGA+TGG | + | chr4_1:85410431-85410450 | None:intergenic | 45.0% | |
| GTTTCTTGGCCCTTATTCGA+CGG | - | chr4_1:85410433-85410452 | Msa0580350:intron | 45.0% | |
| ATAGCCCTTCCGTCGAATAA+GGG | + | chr4_1:85410445-85410464 | None:intergenic | 45.0% | |
| !! | AGAAGCGTGGTATCGATCAA+TGG | - | chr4_1:85410494-85410513 | Msa0580350:intron | 45.0% |
| !! | CAAACCCAGTTTAGCTTGAG+CGG | - | chr4_1:85410632-85410651 | Msa0580350:intron | 45.0% |
| CTTATCCGCTCAAGCTAAAC+TGG | + | chr4_1:85410640-85410659 | None:intergenic | 45.0% | |
| AGGCTTGAAAAGATCTCCCA+CGG | + | chr4_1:85410937-85410956 | None:intergenic | 45.0% | |
| GCAATTCAGGAAAGAGTCAC+CGG | - | chr4_1:85411460-85411479 | Msa0580350:intron | 45.0% | |
| AATAACGGTTTACCGCAAGG+TGG | + | chr4_1:85411742-85411761 | None:intergenic | 45.0% | |
| GAGTTAGCGTACTCAATGCA+TGG | + | chr4_1:85411766-85411785 | None:intergenic | 45.0% | |
| ! | GTCTGGTATCGAATGACTAG+TGG | + | chr4_1:85411788-85411807 | None:intergenic | 45.0% |
| !! | CAGTGCAGCAAATTTCTGGT+GGG | + | chr4_1:85411816-85411835 | None:intergenic | 45.0% |
| ATGGCAGTGCAGCAAATTTC+TGG | + | chr4_1:85411820-85411839 | None:intergenic | 45.0% | |
| TGTCAACTTGTCTACACTCC+TGG | - | chr4_1:85411877-85411896 | Msa0580350:intron | 45.0% | |
| ! | GGTATTGAATTTGACGCCAC+AGG | + | chr4_1:85411956-85411975 | None:intergenic | 45.0% |
| TCAAGTACCATTGCAGAAGC+TGG | + | chr4_1:85411977-85411996 | None:intergenic | 45.0% | |
| AGGATTGCTTTGACTGGACT+TGG | - | chr4_1:85412479-85412498 | Msa0580350:CDS | 45.0% | |
| !!! | AAATATATATATTTTTATGT+TGG | + | chr4_1:85405911-85405930 | None:intergenic | 5.0% |
| !! | TATATAATATATTACTTATT+AGG | - | chr4_1:85411541-85411560 | Msa0580350:intron | 5.0% |
| CAAATGCTTCCACCTTGTGC+TGG | - | chr4_1:85399771-85399790 | Msa0580350:intron | 50.0% | |
| ! | CTGGTGGATGAGTGGAATTG+AGG | + | chr4_1:85399824-85399843 | None:intergenic | 50.0% |
| ! | GCAAATGTCTGGTGGATGAG+TGG | + | chr4_1:85399832-85399851 | None:intergenic | 50.0% |
| GGATTGCAGCAAATGTCTGG+TGG | + | chr4_1:85399840-85399859 | None:intergenic | 50.0% | |
| ! | CCAAAACTTTCGAGTAGGCC+AGG | + | chr4_1:85399921-85399940 | None:intergenic | 50.0% |
| ! | CCTGGCCTACTCGAAAGTTT+TGG | - | chr4_1:85399918-85399937 | Msa0580350:intron | 50.0% |
| ATGGTACCTTTGCAGGAGGT+GGG | + | chr4_1:85399999-85400018 | None:intergenic | 50.0% | |
| TATGGTACCTTTGCAGGAGG+TGG | + | chr4_1:85400000-85400019 | None:intergenic | 50.0% | |
| CTTACAAAGTGACACACCGG+TGG | - | chr4_1:85400702-85400721 | Msa0580350:intron | 50.0% | |
| GCAACACGTGGAAGTGATGA+CGG | - | chr4_1:85401897-85401916 | Msa0580350:intron | 50.0% | |
| TTGGTTTAGGTAGATGCCCG+TGG | + | chr4_1:85402164-85402183 | None:intergenic | 50.0% | |
| GAAATAGGTTAGGCCGAGCT+AGG | - | chr4_1:85402282-85402301 | Msa0580350:intron | 50.0% | |
| AGGCCTTACAAAGCCTAGCT+CGG | + | chr4_1:85402298-85402317 | None:intergenic | 50.0% | |
| TAAGTCTATGACAGGCCGCA+GGG | + | chr4_1:85402359-85402378 | None:intergenic | 50.0% | |
| TACTAGGCTTTCAGAAGGCC+AGG | + | chr4_1:85402397-85402416 | None:intergenic | 50.0% | |
| ! | GGCCTTCTGAAAGCCTAGTA+CGG | - | chr4_1:85402397-85402416 | Msa0580350:intron | 50.0% |
| GAAAAAAGTCTGGCCTGACC+TGG | - | chr4_1:85402834-85402853 | Msa0580350:intron | 50.0% | |
| AGGGAGTAATAGTGACCGGA+GGG | + | chr4_1:85403442-85403461 | None:intergenic | 50.0% | |
| ! | GAAGGGAGTATGCTCCTACA+AGG | - | chr4_1:85403711-85403730 | Msa0580350:intron | 50.0% |
| ATGAATGCTAGGTCGTTGCC+CGG | + | chr4_1:85404201-85404220 | None:intergenic | 50.0% | |
| ! | CACAACCCTCTCCTTTTACC+CGG | - | chr4_1:85404287-85404306 | Msa0580350:intron | 50.0% |
| ! | ACAACCCTCTCCTTTTACCC+GGG | - | chr4_1:85404288-85404307 | Msa0580350:intron | 50.0% |
| TATATGACCCATGCCAAGGC+CGG | + | chr4_1:85404321-85404340 | None:intergenic | 50.0% | |
| ATTTACGGCGCTCAGGATGT+GGG | + | chr4_1:85405220-85405239 | None:intergenic | 50.0% | |
| ACTGCTACCATGAGTGCACA+TGG | - | chr4_1:85405264-85405283 | Msa0580350:intron | 50.0% | |
| ACGGGATACAAAGGCAGCAT+GGG | - | chr4_1:85405355-85405374 | Msa0580350:intron | 50.0% | |
| ! | GGTGATGTTTGGTGATCACG+AGG | + | chr4_1:85405798-85405817 | None:intergenic | 50.0% |
| GCTATTCTCTCACCGTCAGA+TGG | + | chr4_1:85408865-85408884 | None:intergenic | 50.0% | |
| GGATCTGCTGACACCTCATT+CGG | - | chr4_1:85408907-85408926 | Msa0580350:intron | 50.0% | |
| GATCTGCTGACACCTCATTC+GGG | - | chr4_1:85408908-85408927 | Msa0580350:intron | 50.0% | |
| TCACGACGACAAGATCACCA+AGG | + | chr4_1:85409004-85409023 | None:intergenic | 50.0% | |
| GTTAACCCTCCGGTTTCAAG+GGG | + | chr4_1:85409226-85409245 | None:intergenic | 50.0% | |
| GTGTTAACCCTCCGGTTTCA+AGG | + | chr4_1:85409228-85409247 | None:intergenic | 50.0% | |
| ! | TCTCGTGTAAGGCATCCCAA+AGG | + | chr4_1:85410256-85410275 | None:intergenic | 50.0% |
| TGGGATGCCTTACACGAGAT+TGG | - | chr4_1:85410257-85410276 | Msa0580350:intron | 50.0% | |
| !! | CGCGAGTATTGGCTTGAATG+AGG | + | chr4_1:85410340-85410359 | None:intergenic | 50.0% |
| CATATGGATGCCGCGAGTAT+TGG | + | chr4_1:85410351-85410370 | None:intergenic | 50.0% | |
| CGGTCGAGGCCTATAACATA+TGG | + | chr4_1:85410367-85410386 | None:intergenic | 50.0% | |
| AAATTACTCTTGGCCGGTCG+AGG | + | chr4_1:85410381-85410400 | None:intergenic | 50.0% | |
| !! | CAAGAAACGATGGAGTGTCG+AGG | + | chr4_1:85410421-85410440 | None:intergenic | 50.0% |
| CTCGACACTCCATCGTTTCT+TGG | - | chr4_1:85410419-85410438 | Msa0580350:intron | 50.0% | |
| TTGGCCCTTATTCGACGGAA+GGG | - | chr4_1:85410438-85410457 | Msa0580350:intron | 50.0% | |
| CATAGCCCTTCCGTCGAATA+AGG | + | chr4_1:85410446-85410465 | None:intergenic | 50.0% | |
| ! | AATTTTGCCAGCTCGGGATG+TGG | + | chr4_1:85410582-85410601 | None:intergenic | 50.0% |
| !! | GGGGAAGTGTTAAAGATGCG+AGG | - | chr4_1:85410835-85410854 | Msa0580350:intron | 50.0% |
| !! | TGATAATGGTGGTCTACCCG+TGG | - | chr4_1:85410917-85410936 | Msa0580350:intron | 50.0% |
| ! | GATAATGGTGGTCTACCCGT+GGG | - | chr4_1:85410918-85410937 | Msa0580350:intron | 50.0% |
| GGCTTGAAAAGATCTCCCAC+GGG | + | chr4_1:85410936-85410955 | None:intergenic | 50.0% | |
| GGCAATAACGGTTTACCGCA+AGG | + | chr4_1:85411745-85411764 | None:intergenic | 50.0% | |
| ! | GCAGTGCAGCAAATTTCTGG+TGG | + | chr4_1:85411817-85411836 | None:intergenic | 50.0% |
| TACAGAATTCTCCGCACCTG+TGG | - | chr4_1:85411937-85411956 | Msa0580350:intron | 50.0% | |
| TGAATTTGACGCCACAGGTG+CGG | + | chr4_1:85411951-85411970 | None:intergenic | 50.0% | |
| GCAACACCTATAGGCGATGA+AGG | - | chr4_1:85412446-85412465 | Msa0580350:CDS | 50.0% | |
| ACACCTATAGGCGATGAAGG+AGG | - | chr4_1:85412449-85412468 | Msa0580350:CDS | 50.0% | |
| TTCGATCCCACCTCCTGCAA+AGG | - | chr4_1:85399990-85400009 | Msa0580350:intron | 55.0% | |
| CCTGGAGGTTGCAGCAATGA+TGG | + | chr4_1:85400396-85400415 | None:intergenic | 55.0% | |
| CCATCATTGCTGCAACCTCC+AGG | - | chr4_1:85400393-85400412 | Msa0580350:CDS | 55.0% | |
| !! | ACACGTGGAAGTGATGACGG+AGG | - | chr4_1:85401900-85401919 | Msa0580350:intron | 55.0% |
| !! | TGGAAGTGATGACGGAGGAG+CGG | - | chr4_1:85401905-85401924 | Msa0580350:intron | 55.0% |
| ! | AGGCCGAGCTAGGCTTTGTA+AGG | - | chr4_1:85402292-85402311 | Msa0580350:intron | 55.0% |
| AAAATTGGCAGGCCAGGCTC+AGG | + | chr4_1:85402318-85402337 | None:intergenic | 55.0% | |
| GTAAGTCTATGACAGGCCGC+AGG | + | chr4_1:85402360-85402379 | None:intergenic | 55.0% | |
| GCTTTCAGAAGGCCAGGTTC+AGG | + | chr4_1:85402391-85402410 | None:intergenic | 55.0% | |
| GGCCGTACTAGGCTTTCAGA+AGG | + | chr4_1:85402402-85402421 | None:intergenic | 55.0% | |
| ACAGGCTAGTAGGCCGTACT+AGG | + | chr4_1:85402413-85402432 | None:intergenic | 55.0% | |
| GCCTCTTAGGCCTATTAGGC+CGG | + | chr4_1:85402741-85402760 | None:intergenic | 55.0% | |
| TCTGTCGTAGGCTAGGCTGT+AGG | - | chr4_1:85402857-85402876 | Msa0580350:intron | 55.0% | |
| GAGGGAGTAATAGTGACCGG+AGG | + | chr4_1:85403443-85403462 | None:intergenic | 55.0% | |
| CCGGAGGGAGTAATAGTGAC+CGG | + | chr4_1:85403446-85403465 | None:intergenic | 55.0% | |
| CCGGTCACTATTACTCCCTC+CGG | - | chr4_1:85403443-85403462 | Msa0580350:intron | 55.0% | |
| GTTCCCACATCTTCGCGAAC+GGG | + | chr4_1:85404097-85404116 | None:intergenic | 55.0% | |
| GGTTCCCACATCTTCGCGAA+CGG | + | chr4_1:85404098-85404117 | None:intergenic | 55.0% | |
| TTCACTACATCCAGGCGCAG+CGG | - | chr4_1:85404129-85404148 | Msa0580350:intron | 55.0% | |
| GCTATACAGCGCGTTGCTTC+CGG | - | chr4_1:85404179-85404198 | Msa0580350:intron | 55.0% | |
| CTATACAGCGCGTTGCTTCC+GGG | - | chr4_1:85404180-85404199 | Msa0580350:intron | 55.0% | |
| CAAGCCCGGGTAAAAGGAGA+GGG | + | chr4_1:85404295-85404314 | None:intergenic | 55.0% | |
| ! | CTCTCCTTTTACCCGGGCTT+GGG | - | chr4_1:85404294-85404313 | Msa0580350:intron | 55.0% |
| CATTTACGGCGCTCAGGATG+TGG | + | chr4_1:85405221-85405240 | None:intergenic | 55.0% | |
| TGTCGTCATTTACGGCGCTC+AGG | + | chr4_1:85405227-85405246 | None:intergenic | 55.0% | |
| CACGGGATACAAAGGCAGCA+TGG | - | chr4_1:85405354-85405373 | Msa0580350:intron | 55.0% | |
| TTAGACGGACCTCGCTCGAA+TGG | + | chr4_1:85406983-85407002 | None:intergenic | 55.0% | |
| ! | GTAAGGCATCCCAAAGGCCA+AGG | + | chr4_1:85410250-85410269 | None:intergenic | 55.0% |
| CTTGGCCCTTATTCGACGGA+AGG | - | chr4_1:85410437-85410456 | Msa0580350:intron | 55.0% | |
| TCGACGGAAGGGCTATGTGA+TGG | - | chr4_1:85410449-85410468 | Msa0580350:intron | 55.0% | |
| ACATGTACCACATCCCGAGC+TGG | - | chr4_1:85410572-85410591 | Msa0580350:intron | 55.0% | |
| GCGCAAGTTCTTCCACCTTG+CGG | - | chr4_1:85411727-85411746 | Msa0580350:intron | 55.0% | |
| TCCAACTCTTCCGCTGTCCT+CGG | - | chr4_1:85412178-85412197 | Msa0580350:intron | 55.0% | |
| GCTCCTCCTTCATCGCCTAT+AGG | + | chr4_1:85412455-85412474 | None:intergenic | 55.0% | |
| ATAGGCGATGAAGGAGGAGC+AGG | - | chr4_1:85412455-85412474 | Msa0580350:CDS | 55.0% | |
| GCAGGCAGGATTGCTTTGAC+TGG | - | chr4_1:85412473-85412492 | Msa0580350:CDS | 55.0% | |
| !! | GGAAGTGATGACGGAGGAGC+GGG | - | chr4_1:85401906-85401925 | Msa0580350:intron | 60.0% |
| !! | GAAGTGATGACGGAGGAGCG+GGG | - | chr4_1:85401907-85401926 | Msa0580350:intron | 60.0% |
| GCGGGGATGATCACCTTCAC+TGG | - | chr4_1:85401924-85401943 | Msa0580350:intron | 60.0% | |
| ! | GGCTTTGTAAGGCCTGAGCC+TGG | - | chr4_1:85402303-85402322 | Msa0580350:intron | 60.0% |
| GCCGGCCTAATAGGCCTAAG+AGG | - | chr4_1:85402737-85402756 | Msa0580350:intron | 60.0% | |
| AGCCTACGACAGACCAGGTC+AGG | + | chr4_1:85402850-85402869 | None:intergenic | 60.0% | |
| GACCTGGTCTGTCGTAGGCT+AGG | - | chr4_1:85402850-85402869 | Msa0580350:intron | 60.0% | |
| AGCCTAGCCTACGACAGACC+AGG | + | chr4_1:85402855-85402874 | None:intergenic | 60.0% | |
| ATAGGTCAGGCCGGCCTACA+GGG | + | chr4_1:85402884-85402903 | None:intergenic | 60.0% | |
| AATAGGTCAGGCCGGCCTAC+AGG | + | chr4_1:85402885-85402904 | None:intergenic | 60.0% | |
| GGGATGGGAATAGGTCAGGC+CGG | + | chr4_1:85402893-85402912 | None:intergenic | 60.0% | |
| ACATCTTCGCGAACGGGTGC+GGG | + | chr4_1:85404091-85404110 | None:intergenic | 60.0% | |
| CACATCTTCGCGAACGGGTG+CGG | + | chr4_1:85404092-85404111 | None:intergenic | 60.0% | |
| GCACCCGTTCGCGAAGATGT+GGG | - | chr4_1:85404091-85404110 | Msa0580350:intron | 60.0% | |
| TCACTACATCCAGGCGCAGC+GGG | - | chr4_1:85404130-85404149 | Msa0580350:intron | 60.0% | |
| CCAAGCCCGGGTAAAAGGAG+AGG | + | chr4_1:85404296-85404315 | None:intergenic | 60.0% | |
| ! | CCTCTCCTTTTACCCGGGCT+TGG | - | chr4_1:85404293-85404312 | Msa0580350:intron | 60.0% |
| ! | CTTTTACCCGGGCTTGGGAC+CGG | - | chr4_1:85404299-85404318 | Msa0580350:intron | 60.0% |
| ACCGAGGACAGCGGAAGAGT+TGG | + | chr4_1:85412182-85412201 | None:intergenic | 60.0% | |
| GAAGGCCTAAGCCTGCCCTG+CGG | - | chr4_1:85402341-85402360 | Msa0580350:intron | 65.0% | |
| TCTATGACAGGCCGCAGGGC+AGG | + | chr4_1:85402355-85402374 | None:intergenic | 65.0% | |
| GGCCTGACCTGGTCTGTCGT+AGG | - | chr4_1:85402845-85402864 | Msa0580350:intron | 65.0% | |
| GCTAGGCTGTAGGCCCCTGT+AGG | - | chr4_1:85402867-85402886 | Msa0580350:intron | 65.0% | |
| TAGGTCAGGCCGGCCTACAG+GGG | + | chr4_1:85402883-85402902 | None:intergenic | 65.0% | |
| CGCACCCGTTCGCGAAGATG+TGG | - | chr4_1:85404090-85404109 | Msa0580350:intron | 65.0% | |
| CGGTCCCAAGCCCGGGTAAA+AGG | + | chr4_1:85404301-85404320 | None:intergenic | 65.0% | |
| CTTGGGACCGGCCTTGGCAT+GGG | - | chr4_1:85404311-85404330 | Msa0580350:intron | 65.0% | |
| TCTACCTGGGGGTTGCACCG+AGG | + | chr4_1:85412198-85412217 | None:intergenic | 65.0% | |
| GCGATGAAGGAGGAGCAGGC+AGG | - | chr4_1:85412459-85412478 | Msa0580350:CDS | 65.0% | |
| ACAGGCCGCAGGGCAGGCTT+AGG | + | chr4_1:85402349-85402368 | None:intergenic | 70.0% | |
| GGCTGTAGGCCCCTGTAGGC+CGG | - | chr4_1:85402871-85402890 | Msa0580350:intron | 70.0% | |
| GCTTGGGACCGGCCTTGGCA+TGG | - | chr4_1:85404310-85404329 | Msa0580350:intron | 70.0% | |
| GGGGGTTGCACCGAGGACAG+CGG | + | chr4_1:85412191-85412210 | None:intergenic | 70.0% | |
| ! | CTGTCCTCGGTGCAACCCCC+AGG | - | chr4_1:85412191-85412210 | Msa0580350:intron | 70.0% |
| TGAGCAAGGCCCGCTGCGCC+TGG | + | chr4_1:85404142-85404161 | None:intergenic | 75.0% | |
| CCAAGGCCGGTCCCAAGCCC+GGG | + | chr4_1:85404308-85404327 | None:intergenic | 75.0% | |
| GCCAAGGCCGGTCCCAAGCC+CGG | + | chr4_1:85404309-85404328 | None:intergenic | 75.0% | |
| ! | CCCGGGCTTGGGACCGGCCT+TGG | - | chr4_1:85404305-85404324 | Msa0580350:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 85399678 | 85412541 | 85399678 | ID=Msa0580350;Name=Msa0580350 |
| chr4_1 | mRNA | 85399678 | 85412541 | 85399678 | ID=Msa0580350-mRNA-1;Parent=Msa0580350;Name=Msa0580350-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0.16|1|0.4|0.33|6|0|212 |
| chr4_1 | exon | 85412322 | 85412541 | 85412322 | ID=Msa0580350-mRNA-1:exon:31445;Parent=Msa0580350-mRNA-1 |
| chr4_1 | exon | 85412238 | 85412303 | 85412238 | ID=Msa0580350-mRNA-1:exon:31444;Parent=Msa0580350-mRNA-1 |
| chr4_1 | exon | 85411805 | 85411846 | 85411805 | ID=Msa0580350-mRNA-1:exon:31443;Parent=Msa0580350-mRNA-1 |
| chr4_1 | exon | 85400321 | 85400494 | 85400321 | ID=Msa0580350-mRNA-1:exon:31442;Parent=Msa0580350-mRNA-1 |
| chr4_1 | exon | 85400007 | 85400048 | 85400007 | ID=Msa0580350-mRNA-1:exon:31441;Parent=Msa0580350-mRNA-1 |
| chr4_1 | exon | 85399678 | 85399772 | 85399678 | ID=Msa0580350-mRNA-1:exon:31440;Parent=Msa0580350-mRNA-1 |
| chr4_1 | CDS | 85412322 | 85412541 | 85412322 | ID=Msa0580350-mRNA-1:cds;Parent=Msa0580350-mRNA-1 |
| chr4_1 | CDS | 85412238 | 85412303 | 85412238 | ID=Msa0580350-mRNA-1:cds;Parent=Msa0580350-mRNA-1 |
| chr4_1 | CDS | 85411805 | 85411846 | 85411805 | ID=Msa0580350-mRNA-1:cds;Parent=Msa0580350-mRNA-1 |
| chr4_1 | CDS | 85400321 | 85400494 | 85400321 | ID=Msa0580350-mRNA-1:cds;Parent=Msa0580350-mRNA-1 |
| chr4_1 | CDS | 85400007 | 85400048 | 85400007 | ID=Msa0580350-mRNA-1:cds;Parent=Msa0580350-mRNA-1 |
| chr4_1 | CDS | 85399678 | 85399772 | 85399678 | ID=Msa0580350-mRNA-1:cds;Parent=Msa0580350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
