AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0235880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0235880 MtrunA17_Chr2g0284461 98.611 720 8 1 1 718 1 720 0.0 1453
Msa0235880 MtrunA17_Chr5g0437411 37.410 695 387 14 16 674 4 686 7.19e-134 411
Msa0235880 MtrunA17_Chr4g0013091 36.567 670 385 15 20 673 53 698 2.54e-123 385
Msa0235880 MtrunA17_Chr4g0031431 37.936 659 369 18 33 680 6 635 1.20e-107 342
Msa0235880 MtrunA17_Chr4g0059201 34.077 672 416 14 11 672 49 703 5.14e-106 339
Msa0235880 MtrunA17_Chr1g0199321 35.942 626 359 13 56 675 33 622 4.57e-98 315
Msa0235880 MtrunA17_Chr7g0237931 36.923 585 325 15 85 667 59 601 8.02e-98 314
Msa0235880 MtrunA17_Chr7g0248251 35.294 629 363 17 55 675 52 644 7.69e-92 300
Msa0235880 MtrunA17_Chr4g0044411 46.134 388 185 10 288 667 271 642 7.62e-88 289
Msa0235880 MtrunA17_Chr3g0117851 31.982 666 400 16 12 672 5 622 4.38e-86 284
Msa0235880 MtrunA17_Chr5g0413681 30.999 671 437 13 13 672 10 665 6.87e-75 255
Msa0235880 MtrunA17_Chr7g0275081 35.733 389 229 9 291 673 79 452 1.05e-60 211
Msa0235880 MtrunA17_Chr7g0234671 33.838 396 238 11 288 676 76 454 1.03e-53 192
Msa0235880 MtrunA17_Chr3g0139641 93.750 96 6 0 609 704 37 132 6.20e-53 179
Msa0235880 MtrunA17_Chr1g0189811 33.850 387 234 8 288 667 61 432 2.77e-44 165
Msa0235880 MtrunA17_Chr7g0261371 41.516 277 155 7 397 672 517 787 1.48e-42 165
Msa0235880 MtrunA17_Chr7g0261371 48.052 77 40 0 288 364 239 315 2.67e-20 96.3
Msa0235880 MtrunA17_Chr3g0122721 25.798 721 413 26 88 717 50 739 2.25e-42 164
Msa0235880 MtrunA17_Chr3g0106931 44.404 277 142 8 412 687 571 836 1.32e-41 162
Msa0235880 MtrunA17_Chr3g0106931 51.111 90 44 0 278 367 221 310 3.77e-26 114
Msa0235880 MtrunA17_Chr1g0183781 40.830 289 164 7 395 682 441 723 1.35e-41 162
Msa0235880 MtrunA17_Chr1g0183781 52.857 70 33 0 288 357 239 308 1.13e-20 97.1
Msa0235880 MtrunA17_Chr8g0377151 24.926 678 399 20 88 673 51 710 6.23e-37 148
Msa0235880 MtrunA17_Chr1g0152561 37.276 279 167 7 397 673 64 336 1.01e-33 132
Msa0235880 MtrunA17_Chr3g0134761 37.671 292 168 9 397 680 54 339 4.34e-33 130
Msa0235880 MtrunA17_Chr2g0280671 30.571 350 215 8 296 639 21 348 6.35e-33 131
Msa0235880 MtrunA17_Chr2g0290151 35.762 302 182 8 375 672 156 449 6.77e-32 129
Msa0235880 MtrunA17_Chr4g0044631 27.970 404 259 9 282 672 6 390 3.43e-28 117
Msa0235880 MtrunA17_Chr8g0373031 24.215 669 399 27 50 628 16 666 1.73e-27 119
Msa0235880 MtrunA17_Chr7g0235141 98.039 51 1 0 608 658 5 55 2.06e-26 102
Msa0235880 MtrunA17_Chr3g0129811 25.926 432 250 14 278 672 71 469 2.27e-26 113
Msa0235880 MtrunA17_Chr8g0384041 26.521 411 262 11 285 672 5 398 1.16e-25 110
Msa0235880 MtrunA17_Chr3g0110121 27.273 319 184 11 288 582 34 328 1.94e-25 110
Msa0235880 MtrunA17_Chr8g0353271 30.435 299 192 6 387 671 1 297 1.60e-24 105
Msa0235880 MtrunA17_Chr1g0177281 28.349 321 163 10 294 569 11 309 2.61e-24 106
Msa0235880 MtrunA17_Chr1g0177261 28.037 321 164 10 294 569 11 309 3.41e-24 106
Msa0235880 MtrunA17_Chr5g0404311 22.146 438 284 11 291 672 274 710 8.14e-23 103
Msa0235880 MtrunA17_Chr5g0434171 26.316 323 184 10 288 582 33 329 1.20e-22 101
Msa0235880 MtrunA17_Chr5g0429231 34.643 280 174 6 393 667 33 308 1.24e-22 100
Msa0235880 MtrunA17_Chr7g0267501 27.124 306 176 10 290 569 8 292 1.36e-22 101
Msa0235880 MtrunA17_Chr1g0177271 28.616 318 166 10 294 569 11 309 1.56e-22 101
Msa0235880 MtrunA17_Chr1g0198984 38.136 118 67 1 303 420 1 112 5.02e-22 91.7
Msa0235880 MtrunA17_Chr4g0048811 31.727 249 144 7 289 535 4 228 5.06e-22 97.8
Msa0235880 MtrunA17_Chr5g0435041 32.862 283 171 9 405 675 31 306 9.29e-22 97.8
Msa0235880 MtrunA17_Chr6g0479261 42.308 104 49 1 288 380 23 126 3.77e-21 97.1
Msa0235880 MtrunA17_Chr5g0400971 23.896 385 268 6 290 670 67 430 1.90e-20 95.1
Msa0235880 MtrunA17_Chr5g0420471 41.346 104 50 1 288 380 23 126 2.92e-20 94.4
Msa0235880 MtrunA17_Chr2g0322021 28.438 320 176 13 288 585 4 292 9.01e-20 92.4
Msa0235880 MtrunA17_Chr7g0275961 23.222 478 303 10 104 570 82 506 2.00e-19 93.6
Msa0235880 MtrunA17_Chr1g0152291 27.778 306 194 6 272 571 28 312 7.47e-19 90.1
Msa0235880 MtrunA17_Chr3g0144071 25.867 375 230 12 294 656 34 372 7.74e-19 91.3
Msa0235880 MtrunA17_Chr3g0111451 30.357 280 184 6 398 672 45 318 7.37e-17 83.6
Msa0235880 MtrunA17_Chr8g0346441 22.594 478 311 10 103 570 82 510 7.22e-16 82.0
Msa0235880 MtrunA17_Chr1g0177301 35.294 153 75 7 288 435 4 137 3.54e-15 78.2
Msa0235880 MtrunA17_Chr3g0118001 29.762 252 168 6 416 664 233 478 4.25e-15 79.0
Msa0235880 MtrunA17_Chr3g0118001 23.020 404 241 13 291 661 25 391 1.64e-11 67.4
Msa0235880 MtrunA17_Chr7g0247831 47.143 70 37 0 291 360 827 896 4.46e-15 79.3
Msa0235880 MtrunA17_Chr2g0278251 39.496 119 69 2 441 559 5 120 4.79e-15 73.2
Msa0235880 MtrunA17_Chr3g0137061 26.780 295 184 8 397 672 113 394 1.85e-14 76.6
Msa0235880 MtrunA17_Chr1g0202971 48.485 66 34 0 291 356 649 714 2.33e-14 77.0
Msa0235880 MtrunA17_Chr1g0196911 48.529 68 32 2 291 356 507 573 1.90e-13 74.3
Msa0235880 MtrunA17_Chr1g0149941 27.682 289 188 7 412 685 192 474 2.05e-13 73.6
Msa0235880 MtrunA17_Chr8g0390311 42.500 80 44 2 289 367 394 472 4.02e-13 73.2
Msa0235880 MtrunA17_Chr7g0214471 35.577 104 62 4 259 358 562 664 1.32e-12 71.6
Msa0235880 MtrunA17_Chr6g0451581 27.165 254 170 8 416 663 260 504 3.92e-12 69.3
Msa0235880 MtrunA17_Chr6g0449461 27.645 293 191 10 397 678 5 287 1.10e-11 67.0
Msa0235880 MtrunA17_Chr3g0079031 40.909 66 38 1 291 356 731 795 1.71e-11 67.8
Msa0235880 MtrunA17_Chr5g0412171 39.130 69 42 0 290 358 732 800 3.41e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0235880 AT1G29340.1 68.759 733 206 6 1 717 1 726 0.0 929
Msa0235880 AT5G01830.1 36.148 675 398 11 8 680 9 652 7.89e-121 377
Msa0235880 AT3G46510.1 37.174 651 367 17 34 673 10 629 3.14e-113 356
Msa0235880 AT3G54850.1 36.239 654 374 15 32 679 12 628 1.14e-100 323
Msa0235880 AT2G28830.1 35.862 580 341 17 117 686 17 575 2.29e-90 294
Msa0235880 AT5G42340.1 33.386 629 367 15 55 675 74 658 2.21e-85 283
Msa0235880 AT1G23030.1 43.478 391 196 9 288 673 239 609 2.83e-85 281
Msa0235880 AT1G60190.1 30.815 675 431 16 13 672 10 663 3.38e-83 278
Msa0235880 AT1G71020.2 42.280 421 212 13 267 673 69 472 1.95e-81 267
Msa0235880 AT1G71020.1 42.206 417 218 12 267 673 217 620 8.26e-80 267
Msa0235880 AT1G10560.1 29.757 699 418 17 13 672 10 674 5.83e-76 259
Msa0235880 AT3G07360.1 32.405 395 250 9 288 676 72 455 1.41e-53 192
Msa0235880 AT2G23140.1 42.958 284 153 8 397 677 549 826 1.22e-47 181
Msa0235880 AT2G23140.1 35.766 137 83 1 278 409 221 357 1.33e-22 103
Msa0235880 AT2G23140.2 42.958 284 153 8 397 677 546 823 1.43e-47 181
Msa0235880 AT2G23140.2 35.766 137 83 1 278 409 218 354 1.38e-22 103
Msa0235880 AT2G23140.4 42.958 284 153 8 397 677 546 823 1.43e-47 181
Msa0235880 AT2G23140.4 35.766 137 83 1 278 409 218 354 1.38e-22 103
Msa0235880 AT2G23140.3 42.958 284 153 8 397 677 357 634 1.48e-47 179
Msa0235880 AT2G23140.3 35.766 137 83 1 278 409 29 165 2.01e-22 102
Msa0235880 AT2G23140.5 42.958 284 153 8 397 677 357 634 1.48e-47 179
Msa0235880 AT2G23140.5 35.766 137 83 1 278 409 29 165 2.01e-22 102
Msa0235880 AT5G67340.1 41.577 279 153 7 397 672 426 697 1.61e-45 174
Msa0235880 AT5G67340.2 41.577 279 153 7 397 672 426 697 1.61e-45 174
Msa0235880 AT3G54790.3 39.721 287 167 6 397 682 477 758 1.09e-39 157
Msa0235880 AT3G54790.3 45.455 77 42 0 288 364 236 312 6.69e-19 92.0
Msa0235880 AT3G54790.1 39.721 287 167 6 397 682 477 758 1.09e-39 157
Msa0235880 AT3G54790.1 45.455 77 42 0 288 364 236 312 6.69e-19 92.0
Msa0235880 AT3G54790.2 39.721 287 167 6 397 682 441 722 1.16e-39 156
Msa0235880 AT3G54790.2 45.455 77 42 0 288 364 200 276 4.61e-19 92.4
Msa0235880 AT1G24330.1 24.365 669 410 22 88 672 49 705 1.25e-39 157
Msa0235880 AT1G24330.2 24.365 669 410 22 88 672 49 705 1.25e-39 157
Msa0235880 AT1G67530.2 24.664 669 409 20 88 672 49 706 4.32e-38 152
Msa0235880 AT1G67530.1 24.664 669 409 20 88 672 49 706 4.32e-38 152
Msa0235880 AT1G67530.4 24.664 669 409 20 88 672 49 706 4.32e-38 152
Msa0235880 AT5G18320.1 31.566 396 240 12 290 673 72 448 6.86e-38 147
Msa0235880 AT4G21350.1 31.948 385 237 9 290 671 5 367 2.93e-37 144
Msa0235880 AT1G27910.1 25.411 669 401 20 88 672 49 703 1.24e-35 144
Msa0235880 AT3G01400.1 38.321 274 159 8 412 683 83 348 8.85e-35 136
Msa0235880 AT5G58680.1 36.299 281 172 6 395 673 64 339 1.52e-33 132
Msa0235880 AT4G16490.1 37.456 283 163 8 391 667 182 456 3.52e-30 125
Msa0235880 AT1G49780.1 30.170 411 250 8 282 672 6 399 1.54e-29 122
Msa0235880 AT3G19380.1 30.208 384 243 8 282 654 6 375 6.34e-29 120
Msa0235880 AT3G07360.5 29.003 331 218 9 352 676 1 320 3.02e-27 113
Msa0235880 AT3G07360.3 29.003 331 218 9 352 676 1 320 3.02e-27 113
Msa0235880 AT3G07360.9 29.003 331 218 9 352 676 1 320 3.02e-27 113
Msa0235880 AT3G07360.6 29.003 331 218 9 352 676 1 320 3.02e-27 113
Msa0235880 AT3G07360.2 29.003 331 218 9 352 676 1 320 3.02e-27 113
Msa0235880 AT3G07360.8 29.003 331 218 9 352 676 1 320 3.02e-27 113
Msa0235880 AT3G07360.10 29.003 331 218 9 352 676 1 320 3.02e-27 113
Msa0235880 AT3G07360.7 29.003 331 218 9 352 676 1 320 3.02e-27 113
Msa0235880 AT3G07360.4 29.003 331 218 9 352 676 1 320 3.02e-27 113
Msa0235880 AT1G67530.3 24.230 487 284 13 88 494 49 530 1.50e-25 112
Msa0235880 AT5G18330.1 26.571 350 228 10 290 630 65 394 1.22e-24 108
Msa0235880 AT5G18340.1 30.323 310 186 10 290 585 74 367 3.78e-24 106
Msa0235880 AT3G18710.1 25.837 418 254 13 284 672 6 396 4.97e-24 105
Msa0235880 AT1G08315.1 29.739 306 182 9 389 670 4 300 5.50e-24 103
Msa0235880 AT5G37490.1 24.939 413 253 12 288 672 29 412 4.25e-22 100
Msa0235880 AT2G35930.1 24.574 411 268 11 283 673 5 393 1.85e-21 98.2
Msa0235880 AT4G12710.1 34.657 277 168 9 397 664 50 322 3.47e-21 97.1
Msa0235880 AT5G09800.1 31.429 245 135 8 289 521 10 233 8.12e-21 95.9
Msa0235880 AT5G65920.1 24.181 397 268 8 290 681 60 428 1.29e-20 95.9
Msa0235880 AT5G65920.2 24.181 397 268 8 290 681 60 428 1.29e-20 95.9
Msa0235880 AT3G49810.1 28.333 300 185 6 272 569 53 324 1.35e-20 95.9
Msa0235880 AT1G66160.1 24.384 406 257 13 288 673 31 406 4.39e-20 94.0
Msa0235880 AT3G52450.1 44.211 95 46 2 285 372 2 96 4.03e-19 91.3
Msa0235880 AT5G64660.1 54.167 72 33 0 285 356 5 76 6.54e-19 90.5
Msa0235880 AT3G03440.1 30.545 275 178 7 409 676 81 349 1.95e-18 89.0
Msa0235880 AT5G62560.1 31.507 219 141 6 416 629 258 472 1.65e-16 84.0
Msa0235880 AT2G45920.1 46.053 76 41 0 284 359 319 394 1.68e-16 82.8
Msa0235880 AT3G61390.4 33.803 142 91 2 218 356 203 344 1.28e-15 79.7
Msa0235880 AT4G31890.3 27.974 311 195 8 409 711 160 449 1.79e-15 80.5
Msa0235880 AT4G31890.2 27.974 311 195 8 409 711 160 449 1.79e-15 80.5
Msa0235880 AT4G31890.1 27.974 311 195 8 409 711 160 449 1.79e-15 80.5
Msa0235880 AT3G61390.2 33.803 142 91 2 218 356 278 419 2.88e-15 79.3
Msa0235880 AT4G36550.1 40.506 79 47 0 289 367 218 296 3.35e-15 80.1
Msa0235880 AT1G01660.2 48.485 66 34 0 291 356 499 564 3.75e-15 79.7
Msa0235880 AT1G01660.1 48.485 66 34 0 291 356 498 563 3.84e-15 79.7
Msa0235880 AT5G65200.1 28.431 306 193 9 416 705 248 543 5.72e-15 79.0
Msa0235880 AT1G76390.1 24.029 412 254 13 294 687 29 399 3.85e-13 73.6
Msa0235880 AT1G76390.2 24.029 412 254 13 294 687 29 399 3.85e-13 73.6
Msa0235880 AT1G56040.1 47.619 63 33 0 291 353 354 416 4.37e-13 72.4
Msa0235880 AT3G11840.1 46.479 71 36 2 288 357 8 77 5.62e-13 72.4
Msa0235880 AT1G01680.1 36.458 96 58 1 261 356 207 299 9.72e-13 70.1
Msa0235880 AT1G56030.1 42.466 73 41 1 281 353 315 386 3.35e-12 69.3
Msa0235880 AT2G45910.2 41.429 70 41 0 291 360 764 833 7.31e-12 69.3
Msa0235880 AT2G45910.1 41.429 70 41 0 291 360 764 833 7.31e-12 69.3
Msa0235880 AT3G47820.1 31.050 219 138 8 419 628 229 443 1.20e-11 68.2
Msa0235880 AT5G40140.1 27.757 263 176 8 416 672 252 506 1.28e-11 68.2
Msa0235880 AT2G25130.1 28.788 264 168 9 415 665 132 388 5.17e-11 66.2
Msa0235880 AT5G14510.1 27.875 287 190 9 396 674 4 281 7.65e-11 64.7

Find 176 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAAAATCATTCAATTTC+GGG 0.150165 2_2:+8731532 Msa0235880:CDS
CCTACAGTTTCTGTGCTTAA+AGG 0.158681 2_2:+8731883 Msa0235880:CDS
CAGCTTTAGTTGAGGCTTTA+GGG 0.229147 2_2:+8732862 Msa0235880:CDS
GCTTCAAAATCATTCAATTT+CGG 0.229537 2_2:+8731531 Msa0235880:CDS
ACAGCTTTAGTTGAGGCTTT+AGG 0.233840 2_2:+8732861 Msa0235880:CDS
TTGGAGTATTTGAAAGATTC+TGG 0.234211 2_2:+8731391 Msa0235880:CDS
GGTTCGGTTCTTCCGGCTAC+TGG 0.246708 2_2:+8731418 Msa0235880:CDS
TCAAGAGATTTCGACGCTTT+TGG 0.250443 2_2:+8731573 Msa0235880:CDS
ATATGGAGGATGATGCTCTT+AGG 0.267598 2_2:+8731692 Msa0235880:CDS
GATGAGCATGATTTGGAAAA+TGG 0.270433 2_2:+8731958 Msa0235880:CDS
CTTCGCAATTCTTCCGAATC+AGG 0.273597 2_2:-8731760 None:intergenic
TTTGTTTGAGTAAGGATGTT+AGG 0.281656 2_2:+8731617 Msa0235880:CDS
ATGATAGGAGCTCCATTTCT+AGG 0.287771 2_2:+8732118 Msa0235880:CDS
CTCATCAAATCCAACGATAT+CGG 0.300323 2_2:-8732063 None:intergenic
AAGATTTGCAGTTGCTCTAT+TGG 0.307314 2_2:-8732340 None:intergenic
CGCGCTTTCCTTGCAGAAGC+GGG 0.314199 2_2:+8732453 Msa0235880:CDS
GCAAGTGTTTGACCTGTCTT+TGG 0.321821 2_2:-8732168 None:intergenic
TTTGTGATTGAAATGGCTTC+AGG 0.322601 2_2:+8731163 None:intergenic
TAGAACTGAAATTGAGGCTT+TGG 0.324110 2_2:+8731825 Msa0235880:CDS
CTTCAAACGCTACTATTTAC+CGG 0.326512 2_2:+8733119 Msa0235880:CDS
TGAGGAAGATGAGCATGATT+TGG 0.336434 2_2:+8731951 Msa0235880:CDS
TTCTCCTGAGCAACAGAATT+AGG 0.341773 2_2:-8732510 None:intergenic
CAGTTGCTCTATTGGCTTCA+AGG 0.342436 2_2:-8732332 None:intergenic
ATTGGCTTCAAGGGCAGCTT+TGG 0.347815 2_2:-8732322 None:intergenic
TGATTTAAGCGACGTTGCTT+TGG 0.347959 2_2:+8731249 Msa0235880:CDS
TTCCTGATTCACTAATGCTT+TGG 0.352423 2_2:-8732949 None:intergenic
CCATCACCTCTGGTGGTTCA+AGG 0.353035 2_2:-8732263 None:intergenic
TATTTGAAAGATTCTGGTTC+GGG 0.353439 2_2:+8731397 Msa0235880:CDS
CTCAAACAAACATCCTTAAC+AGG 0.358956 2_2:-8731604 None:intergenic
GAGTAAGGATGTTAGGGAAC+AGG 0.363583 2_2:+8731624 Msa0235880:CDS
TGGCCATGACGCGGTATTGT+AGG 0.366029 2_2:+8731911 Msa0235880:CDS
ACTGCATCCTTCTTTCCTCT+TGG 0.373283 2_2:-8732771 None:intergenic
CTCATTCAACAACTCGCTAA+TGG 0.373337 2_2:+8732363 Msa0235880:CDS
GGCTTCAAGGGCAGCTTTGG+TGG 0.377394 2_2:-8732319 None:intergenic
CTCGCTAATGGATCGCAATC+TGG 0.378422 2_2:+8732375 Msa0235880:CDS
AGCTTTATTTGTTGCTGTAT+AGG 0.384955 2_2:+8731458 Msa0235880:CDS
GAGGCAGTAGCTGGGTTGAT+AGG 0.387534 2_2:+8732972 Msa0235880:CDS
CCACCGGTCAAACTTATGAT+AGG 0.396279 2_2:+8732103 Msa0235880:CDS
CCCATTGCTTCCATCACCTC+TGG 0.402084 2_2:-8732273 None:intergenic
TTTCTTGATCAGTTTGAGAA+TGG 0.402402 2_2:+8731730 Msa0235880:CDS
TTGATCGTTCGACAGCCTTT+CGG 0.403759 2_2:+8732924 Msa0235880:CDS
CTACAGTTTCTGTGCTTAAA+GGG 0.404783 2_2:+8731884 Msa0235880:CDS
GAAAGATTCTGGTTCGGGTT+CGG 0.406290 2_2:+8731402 Msa0235880:CDS
AAATTCCTCAAGGCACGATT+CGG 0.407581 2_2:-8732207 None:intergenic
AGCCAAAGCATTAGTGAATC+AGG 0.408750 2_2:+8732947 Msa0235880:CDS
GAAAATGCATCTCTGCATTA+TGG 0.411008 2_2:+8733197 Msa0235880:CDS
GTATTATACCACTATATTAC+AGG 0.417054 2_2:-8733320 None:intergenic
AATTCCTCAAGGCACGATTC+GGG 0.418398 2_2:-8732206 None:intergenic
TTCTGTGCTTAAAGGGTTGG+TGG 0.421580 2_2:+8731891 Msa0235880:CDS
AATCAGGAAGAGGCAGTAGC+TGG 0.423889 2_2:+8732963 Msa0235880:CDS
CATCTTGTAACAGCCCTGCT+AGG 0.429058 2_2:-8732743 None:intergenic
TGCAACTGAAAGGGTGGTTA+AGG 0.429209 2_2:+8733076 Msa0235880:CDS
GTCGCCTAATTCTGTTGCTC+AGG 0.430223 2_2:+8732506 Msa0235880:CDS
TCTCTGCATTATGGTGGATT+AGG 0.430223 2_2:+8733206 Msa0235880:CDS
TGGTTCGGGTTCGGTTCTTC+CGG 0.430586 2_2:+8731411 Msa0235880:CDS
GTATTTGAAAGATTCTGGTT+CGG 0.431612 2_2:+8731396 Msa0235880:CDS
GTTGAGGCTTTAGGGAATGA+AGG 0.435223 2_2:+8732870 Msa0235880:CDS
AATCATTCTAACACAATTCT+CGG 0.435545 2_2:-8732823 None:intergenic
AACTGAAATTGAGGCTTTGG+AGG 0.435945 2_2:+8731828 Msa0235880:CDS
TTCATCCATCCACCTAGAAA+TGG 0.436833 2_2:-8732130 None:intergenic
TTGTTTGAGTAAGGATGTTA+GGG 0.439148 2_2:+8731618 Msa0235880:CDS
ATCGGGCAACAAAAGTCCTT+TGG 0.444185 2_2:-8732045 None:intergenic
GTTAAGGCACCAGCTATTGC+CGG 0.446225 2_2:+8733092 Msa0235880:CDS
AGTTTCTGTGCTTAAAGGGT+TGG 0.449301 2_2:+8731888 Msa0235880:CDS
TAAGGATGTTTGTTTGAGTA+AGG 0.449824 2_2:+8731609 Msa0235880:CDS
AAGATAATCGCGGACGAGAC+CGG 0.451320 2_2:+8732708 Msa0235880:CDS
TTCTTGATCAGTTTGAGAAT+GGG 0.456367 2_2:+8731731 Msa0235880:CDS
ACGTCTAGCTCGCTTTGTCC+CGG 0.460832 2_2:-8733138 None:intergenic
GAATGGGAGGATTCCTGATT+CGG 0.461877 2_2:+8731747 Msa0235880:CDS
CAAGTGTTTGACCTGTCTTT+GGG 0.462011 2_2:-8732167 None:intergenic
TATGGCACCCGCTGCTTCCT+CGG 0.462548 2_2:-8732898 None:intergenic
TATGGAGGATGATGCTCTTA+GGG 0.462714 2_2:+8731693 Msa0235880:CDS
TCATCAAATCCAACGATATC+GGG 0.463177 2_2:-8732062 None:intergenic
TGCTAGGGCTTCAACAGCTC+CGG 0.464260 2_2:-8732727 None:intergenic
GCTCATTCACAACCGTTACA+AGG 0.467259 2_2:-8731279 None:intergenic
CATCACCTCTGGTGGTTCAA+GGG 0.468639 2_2:-8732262 None:intergenic
GGAGCTGTTGAAGCCCTAGC+AGG 0.468640 2_2:+8732729 Msa0235880:CDS
TAGTAGCGTTTGAAGTAATC+CGG 0.470251 2_2:-8733111 None:intergenic
TAGATTCAAGCTTTGCTGCT+GGG 0.472459 2_2:+8733267 Msa0235880:CDS
GAAAGGCTGTCGAACGATCA+AGG 0.472529 2_2:-8732922 None:intergenic
TTGTGGAACGCCGAGGGGTA+AGG 0.476434 2_2:+8733004 Msa0235880:CDS
ATAGATTCAAGCTTTGCTGC+TGG 0.485421 2_2:+8733266 Msa0235880:CDS
CTGGAAAGACTATAGCTGCC+AGG 0.488168 2_2:+8732394 Msa0235880:CDS
TGAAGTAATCCGGCAATAGC+TGG 0.491668 2_2:-8733101 None:intergenic
GTTCGGTTCTTCCGGCTACT+GGG 0.492063 2_2:+8731419 Msa0235880:CDS
TTGTGATTGAAATGGCTTCA+GGG 0.496168 2_2:+8731164 None:intergenic
TTCAAACGCTACTATTTACC+GGG 0.497622 2_2:+8733120 Msa0235880:CDS
CAAGAACAAAAGCCGGATCA+TGG 0.497640 2_2:+8732569 Msa0235880:CDS
ATTTCTAGGTGGATGGATGA+AGG 0.499801 2_2:+8732132 Msa0235880:CDS
GCAACGTCGCTTAAATCAAC+CGG 0.501838 2_2:-8731244 None:intergenic
CCTTGAACCACCAGAGGTGA+TGG 0.502855 2_2:+8732263 Msa0235880:CDS
TCTCTGTACCTGTAATATAG+TGG 0.503843 2_2:+8733312 Msa0235880:CDS
ATCTTGTAACAGCCCTGCTA+GGG 0.506357 2_2:-8732742 None:intergenic
TGTGTTAGAATGATTGAGGC+AGG 0.508715 2_2:+8732831 Msa0235880:CDS
AACTTGCCTCGTCCATGATC+CGG 0.508782 2_2:-8732581 None:intergenic
AGATTCAAGCTTTGCTGCTG+GGG 0.516848 2_2:+8733268 Msa0235880:CDS
TGTTCTTGTCATATATGGAA+AGG 0.516928 2_2:-8732554 None:intergenic
GTTGGATTTGATGAGAGATC+CGG 0.524629 2_2:+8732071 Msa0235880:CDS
TTCTTTGATTAGAAAAGTTG+AGG 0.528363 2_2:+8731354 Msa0235880:CDS
CGCTTTCCTTGCAGAAGCGG+GGG 0.533390 2_2:+8732455 Msa0235880:CDS
GAGGTTCAGCTGCAACTGAA+AGG 0.536310 2_2:+8733066 Msa0235880:CDS
AGTCAGAAGAAGATCAAGAA+GGG 0.537430 2_2:+8731982 Msa0235880:CDS
TGGGACTCCAAGAGGAAAGA+AGG 0.539839 2_2:+8732764 Msa0235880:CDS
AGTTGCTCTATTGGCTTCAA+GGG 0.540340 2_2:-8732331 None:intergenic
CTGTCGAACGATCAAGGCTA+TGG 0.540941 2_2:-8732916 None:intergenic
ACCAGAGGTGATGGAAGCAA+TGG 0.541774 2_2:+8732272 Msa0235880:CDS
GAGCTCCATTTCTAGGTGGA+TGG 0.543119 2_2:+8732125 Msa0235880:CDS
GAATTGTGTTAGAATGATTG+AGG 0.546968 2_2:+8732827 Msa0235880:CDS
AGACAAAGCAACCCAGTAGC+CGG 0.548967 2_2:-8731430 None:intergenic
AGCATTAGTGAATCAGGAAG+AGG 0.550476 2_2:+8732953 Msa0235880:CDS
GCGCTTTCCTTGCAGAAGCG+GGG 0.551327 2_2:+8732454 Msa0235880:CDS
GAAAGCAAGTCCCTAAGATA+AGG 0.551339 2_2:-8732483 None:intergenic
TGCAAGCAATCGAATCTCCC+TGG 0.551715 2_2:-8732412 None:intergenic
GGAGTTGCCGAGGAAGCAGC+GGG 0.552778 2_2:+8732891 Msa0235880:CDS
GCTTCAAGGGCAGCTTTGGT+GGG 0.553901 2_2:-8732318 None:intergenic
CATTATGGTGGATTAGGTGT+AGG 0.556183 2_2:+8733212 Msa0235880:CDS
GTGCAGTGGTGTAGTGCTCA+TGG 0.560585 2_2:+8732234 Msa0235880:CDS
TGTGATTGAAATGGCTTCAG+GGG 0.562852 2_2:+8731165 None:intergenic
TCGCGCTTTCCTTGCAGAAG+CGG 0.563986 2_2:+8732452 Msa0235880:CDS
TTGATCAGTTTGAGAATGGG+AGG 0.564834 2_2:+8731734 Msa0235880:CDS
CCAGAGGTGATGGAAGCAAT+GGG 0.566861 2_2:+8732273 Msa0235880:CDS
TATATGACAAGAACAAAAGC+CGG 0.568679 2_2:+8732562 Msa0235880:CDS
ATTGCTTCCATCACCTCTGG+TGG 0.568962 2_2:-8732270 None:intergenic
GCCAGAAAAGCTTCCAACGT+TGG 0.569538 2_2:-8731220 None:intergenic
GCTCCTATCATAAGTTTGAC+CGG 0.571045 2_2:-8732106 None:intergenic
TGGAAAGACTATAGCTGCCA+GGG 0.573545 2_2:+8732395 Msa0235880:CDS
CTAGCAGGGCTGTTACAAGA+TGG 0.573980 2_2:+8732744 Msa0235880:CDS
AGGTTCAGCTGCAACTGAAA+GGG 0.574046 2_2:+8733067 Msa0235880:CDS
TAGCAGGGCTGTTACAAGAT+GGG 0.574716 2_2:+8732745 Msa0235880:CDS
AGCAGTAACAGCTTTAGTTG+AGG 0.575678 2_2:+8732854 Msa0235880:CDS
ATCACCTCTGGTGGTTCAAG+GGG 0.575899 2_2:-8732261 None:intergenic
CATACAACTTGCCCAAAGAC+AGG 0.575950 2_2:+8732156 Msa0235880:CDS
TTTCTAGGTGGATGGATGAA+GGG 0.578152 2_2:+8732133 Msa0235880:CDS
TTTGGTTCAAACCCTTGTAA+CGG 0.581469 2_2:+8731267 Msa0235880:CDS
AACACAATTCTCGGTGTGTG+TGG 0.583018 2_2:-8732814 None:intergenic
ACTAATGCTTTGGCTCCGAA+AGG 0.583990 2_2:-8732939 None:intergenic
TTGTTGTAGAACTGAAATTG+AGG 0.586669 2_2:+8731819 Msa0235880:CDS
TGACCGGTGGAAATAATCAC+CGG 0.587267 2_2:-8732090 None:intergenic
AAGTCAGAAGAAGATCAAGA+AGG 0.587414 2_2:+8731981 Msa0235880:CDS
CAAAAGCCGGATCATGGACG+AGG 0.588615 2_2:+8732575 Msa0235880:CDS
CTCATTCACAACCGTTACAA+GGG 0.589339 2_2:-8731278 None:intergenic
TGAGGAATTTGATTGTGCAG+TGG 0.592102 2_2:+8732220 Msa0235880:CDS
GAGCTGTTGAAGCCCTAGCA+GGG 0.592703 2_2:+8732730 Msa0235880:CDS
CTCGAGTTATGTCGGAGTGG+AGG 0.596177 2_2:+8733047 Msa0235880:CDS
GCGCGCAATCGAGTAAGTTG+TGG 0.596548 2_2:+8731503 Msa0235880:CDS
GATCCGGTGATTATTTCCAC+CGG 0.596914 2_2:+8732087 Msa0235880:CDS
CCTTTAAGCACAGAAACTGT+AGG 0.597906 2_2:-8731883 None:intergenic
CAGCATTGCTCGAGTTATGT+CGG 0.598860 2_2:+8733039 Msa0235880:CDS
GATGCGTTGTGGAACGCCGA+GGG 0.599485 2_2:+8732998 Msa0235880:CDS
TTTGTTGAAGCAATCAAGGA+GGG 0.600758 2_2:+8731654 Msa0235880:CDS
TTGTCCCGAATCGTGCCTTG+AGG 0.601539 2_2:+8732202 Msa0235880:CDS
ATCAGGAAGAGGCAGTAGCT+GGG 0.604618 2_2:+8732964 Msa0235880:CDS
ACAGGTACAGAGATTGACAT+TGG 0.607523 2_2:-8733302 None:intergenic
AGGAGTTGCCGAGGAAGCAG+CGG 0.609177 2_2:+8732890 Msa0235880:CDS
CGGGCATACAACAGAAGCAA+GGG 0.613674 2_2:+8732635 Msa0235880:CDS
TTCAGCTGCAACTGAAAGGG+TGG 0.618846 2_2:+8733070 Msa0235880:CDS
ACTGCATTCTCCTTACCCCT+CGG 0.620648 2_2:-8733014 None:intergenic
AAACCTACAATACCGCGTCA+TGG 0.625852 2_2:-8731914 None:intergenic
TAGGCTCAATATCACCCTCA+TGG 0.626253 2_2:-8731864 None:intergenic
AGGGAATGAAGGAGTTGCCG+AGG 0.642452 2_2:+8732881 Msa0235880:CDS
TGATGCGTTGTGGAACGCCG+AGG 0.642623 2_2:+8732997 Msa0235880:CDS
GCGGCGAAGATCACCAACGT+TGG 0.647272 2_2:+8731207 Msa0235880:CDS
TTACAAGATGGGACTCCAAG+AGG 0.648684 2_2:+8732756 Msa0235880:CDS
AATGCATCTCTGCATTATGG+TGG 0.653507 2_2:+8733200 Msa0235880:CDS
ATGCGTTGTGGAACGCCGAG+GGG 0.657188 2_2:+8732999 Msa0235880:CDS
AAGGGTTGGTGGCCATGACG+CGG 0.659773 2_2:+8731902 Msa0235880:CDS
TCGGGCATACAACAGAAGCA+AGG 0.661427 2_2:+8732634 Msa0235880:CDS
GAGCAGATTGTTAACCATGA+GGG 0.670920 2_2:+8731850 Msa0235880:CDS
CCTATCATAAGTTTGACCGG+TGG 0.675136 2_2:-8732103 None:intergenic
GGAGCAGATTGTTAACCATG+AGG 0.676840 2_2:+8731849 Msa0235880:CDS
TTGATAGGAATGATGCGTTG+TGG 0.684688 2_2:+8732987 Msa0235880:CDS
CTGCACAATCAAATTCCTCA+AGG 0.687608 2_2:-8732217 None:intergenic
AATTCCCCTTGAACCACCAG+AGG 0.698880 2_2:+8732257 Msa0235880:CDS
TTGCTCGAGTTATGTCGGAG+TGG 0.705584 2_2:+8733044 Msa0235880:CDS
ATAGGAGCTCCATTTCTAGG+TGG 0.709336 2_2:+8732121 Msa0235880:CDS
TGACTATAAGAAGATAATCG+CGG 0.728947 2_2:+8732698 Msa0235880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTGTAGGTTTTTGATATT+TGG + chr2_2:8731925-8731944 Msa0235880:CDS 20.0%
!!! ATTGTTAATGTTTTGAGATT+CGG + chr2_2:8732615-8732634 Msa0235880:CDS 20.0%
!!! TATTGTAGGTTTTTGATATT+TGG + chr2_2:8731925-8731944 Msa0235880:CDS 20.0%
!!! ATTGTTAATGTTTTGAGATT+CGG + chr2_2:8732615-8732634 Msa0235880:CDS 20.0%
! TTCTTTGATTAGAAAAGTTG+AGG + chr2_2:8731354-8731373 Msa0235880:CDS 25.0%
! GCTTCAAAATCATTCAATTT+CGG + chr2_2:8731531-8731550 Msa0235880:CDS 25.0%
! CTTCAAAATCATTCAATTTC+GGG + chr2_2:8731532-8731551 Msa0235880:CDS 25.0%
!! TAAGCTTTTTATTGATATGG+AGG + chr2_2:8731678-8731697 Msa0235880:CDS 25.0%
!! GTTTTTGATATTTGGATTTG+AGG + chr2_2:8731933-8731952 Msa0235880:CDS 25.0%
!!! TACATTTTTAACTGTTCCAA+AGG + chr2_2:8732029-8732048 Msa0235880:CDS 25.0%
!!! TTGTTAATGTTTTGAGATTC+GGG + chr2_2:8732616-8732635 Msa0235880:CDS 25.0%
! AATCATTCTAACACAATTCT+CGG - chr2_2:8732826-8732845 None:intergenic 25.0%
! TTCTTTGATTAGAAAAGTTG+AGG + chr2_2:8731354-8731373 Msa0235880:CDS 25.0%
! GCTTCAAAATCATTCAATTT+CGG + chr2_2:8731531-8731550 Msa0235880:CDS 25.0%
! CTTCAAAATCATTCAATTTC+GGG + chr2_2:8731532-8731551 Msa0235880:CDS 25.0%
!! TAAGCTTTTTATTGATATGG+AGG + chr2_2:8731678-8731697 Msa0235880:CDS 25.0%
!! GTTTTTGATATTTGGATTTG+AGG + chr2_2:8731933-8731952 Msa0235880:CDS 25.0%
!!! TACATTTTTAACTGTTCCAA+AGG + chr2_2:8732029-8732048 Msa0235880:CDS 25.0%
!!! TTGTTAATGTTTTGAGATTC+GGG + chr2_2:8732616-8732635 Msa0235880:CDS 25.0%
! AATCATTCTAACACAATTCT+CGG - chr2_2:8732826-8732845 None:intergenic 25.0%
! TAGAAAAGTTGAGGTTTTTC+AGG + chr2_2:8731363-8731382 Msa0235880:CDS 30.0%
! TTGGAGTATTTGAAAGATTC+TGG + chr2_2:8731391-8731410 Msa0235880:CDS 30.0%
! GTATTTGAAAGATTCTGGTT+CGG + chr2_2:8731396-8731415 Msa0235880:CDS 30.0%
!! TATTTGAAAGATTCTGGTTC+GGG + chr2_2:8731397-8731416 Msa0235880:CDS 30.0%
!! AGCTTTATTTGTTGCTGTAT+AGG + chr2_2:8731458-8731477 Msa0235880:CDS 30.0%
! TTTGGATGTTTTTCCTGTTA+AGG + chr2_2:8731591-8731610 Msa0235880:CDS 30.0%
TAAGGATGTTTGTTTGAGTA+AGG + chr2_2:8731609-8731628 Msa0235880:CDS 30.0%
TTTGTTTGAGTAAGGATGTT+AGG + chr2_2:8731617-8731636 Msa0235880:CDS 30.0%
TTGTTTGAGTAAGGATGTTA+GGG + chr2_2:8731618-8731637 Msa0235880:CDS 30.0%
! GGCTAAGCTTTTTATTGATA+TGG + chr2_2:8731675-8731694 Msa0235880:CDS 30.0%
TTTCTTGATCAGTTTGAGAA+TGG + chr2_2:8731730-8731749 Msa0235880:CDS 30.0%
TTCTTGATCAGTTTGAGAAT+GGG + chr2_2:8731731-8731750 Msa0235880:CDS 30.0%
TTGTTGTAGAACTGAAATTG+AGG + chr2_2:8731819-8731838 Msa0235880:CDS 30.0%
TGTTCTTGTCATATATGGAA+AGG - chr2_2:8732557-8732576 None:intergenic 30.0%
! GCTTTTGTTCTTGTCATATA+TGG - chr2_2:8732562-8732581 None:intergenic 30.0%
TATATGACAAGAACAAAAGC+CGG + chr2_2:8732562-8732581 Msa0235880:CDS 30.0%
TGACTATAAGAAGATAATCG+CGG + chr2_2:8732698-8732717 Msa0235880:CDS 30.0%
GAATTGTGTTAGAATGATTG+AGG + chr2_2:8732827-8732846 Msa0235880:CDS 30.0%
! TAGAAAAGTTGAGGTTTTTC+AGG + chr2_2:8731363-8731382 Msa0235880:CDS 30.0%
! TTGGAGTATTTGAAAGATTC+TGG + chr2_2:8731391-8731410 Msa0235880:CDS 30.0%
! GTATTTGAAAGATTCTGGTT+CGG + chr2_2:8731396-8731415 Msa0235880:CDS 30.0%
!! TATTTGAAAGATTCTGGTTC+GGG + chr2_2:8731397-8731416 Msa0235880:CDS 30.0%
!! AGCTTTATTTGTTGCTGTAT+AGG + chr2_2:8731458-8731477 Msa0235880:CDS 30.0%
! TTTGGATGTTTTTCCTGTTA+AGG + chr2_2:8731591-8731610 Msa0235880:CDS 30.0%
TAAGGATGTTTGTTTGAGTA+AGG + chr2_2:8731609-8731628 Msa0235880:CDS 30.0%
TTTGTTTGAGTAAGGATGTT+AGG + chr2_2:8731617-8731636 Msa0235880:CDS 30.0%
TTGTTTGAGTAAGGATGTTA+GGG + chr2_2:8731618-8731637 Msa0235880:CDS 30.0%
! GGCTAAGCTTTTTATTGATA+TGG + chr2_2:8731675-8731694 Msa0235880:CDS 30.0%
TTTCTTGATCAGTTTGAGAA+TGG + chr2_2:8731730-8731749 Msa0235880:CDS 30.0%
TTCTTGATCAGTTTGAGAAT+GGG + chr2_2:8731731-8731750 Msa0235880:CDS 30.0%
TTGTTGTAGAACTGAAATTG+AGG + chr2_2:8731819-8731838 Msa0235880:CDS 30.0%
TGTTCTTGTCATATATGGAA+AGG - chr2_2:8732557-8732576 None:intergenic 30.0%
! GCTTTTGTTCTTGTCATATA+TGG - chr2_2:8732562-8732581 None:intergenic 30.0%
TATATGACAAGAACAAAAGC+CGG + chr2_2:8732562-8732581 Msa0235880:CDS 30.0%
TGACTATAAGAAGATAATCG+CGG + chr2_2:8732698-8732717 Msa0235880:CDS 30.0%
GAATTGTGTTAGAATGATTG+AGG + chr2_2:8732827-8732846 Msa0235880:CDS 30.0%
! TTTGGTTCAAACCCTTGTAA+CGG + chr2_2:8731267-8731286 Msa0235880:CDS 35.0%
! AAGAACGTGTATTTTTCCTC+TGG - chr2_2:8731339-8731358 None:intergenic 35.0%
CTCAAACAAACATCCTTAAC+AGG - chr2_2:8731607-8731626 None:intergenic 35.0%
! AGCTTTTGTTGAAGCAATCA+AGG + chr2_2:8731650-8731669 Msa0235880:CDS 35.0%
! TTTTGTTGAAGCAATCAAGG+AGG + chr2_2:8731653-8731672 Msa0235880:CDS 35.0%
TTTGTTGAAGCAATCAAGGA+GGG + chr2_2:8731654-8731673 Msa0235880:CDS 35.0%
TAGAACTGAAATTGAGGCTT+TGG + chr2_2:8731825-8731844 Msa0235880:CDS 35.0%
CTACAGTTTCTGTGCTTAAA+GGG + chr2_2:8731884-8731903 Msa0235880:CDS 35.0%
! GATGAGCATGATTTGGAAAA+TGG + chr2_2:8731958-8731977 Msa0235880:CDS 35.0%
AAGTCAGAAGAAGATCAAGA+AGG + chr2_2:8731981-8732000 Msa0235880:CDS 35.0%
AGTCAGAAGAAGATCAAGAA+GGG + chr2_2:8731982-8732001 Msa0235880:CDS 35.0%
TCATCAAATCCAACGATATC+GGG - chr2_2:8732065-8732084 None:intergenic 35.0%
CTCATCAAATCCAACGATAT+CGG - chr2_2:8732066-8732085 None:intergenic 35.0%
AAGATTTGCAGTTGCTCTAT+TGG - chr2_2:8732343-8732362 None:intergenic 35.0%
ATTCGATTGCTTGCAAAAAC+CGG + chr2_2:8732420-8732439 Msa0235880:CDS 35.0%
TTCCTGATTCACTAATGCTT+TGG - chr2_2:8732952-8732971 None:intergenic 35.0%
! TAGTAGCGTTTGAAGTAATC+CGG - chr2_2:8733114-8733133 None:intergenic 35.0%
CTTCAAACGCTACTATTTAC+CGG + chr2_2:8733119-8733138 Msa0235880:CDS 35.0%
TTCAAACGCTACTATTTACC+GGG + chr2_2:8733120-8733139 Msa0235880:CDS 35.0%
GAAAATGCATCTCTGCATTA+TGG + chr2_2:8733197-8733216 Msa0235880:CDS 35.0%
! TTTGGTTCAAACCCTTGTAA+CGG + chr2_2:8731267-8731286 Msa0235880:CDS 35.0%
! AAGAACGTGTATTTTTCCTC+TGG - chr2_2:8731339-8731358 None:intergenic 35.0%
CTCAAACAAACATCCTTAAC+AGG - chr2_2:8731607-8731626 None:intergenic 35.0%
! AGCTTTTGTTGAAGCAATCA+AGG + chr2_2:8731650-8731669 Msa0235880:CDS 35.0%
! TTTTGTTGAAGCAATCAAGG+AGG + chr2_2:8731653-8731672 Msa0235880:CDS 35.0%
TTTGTTGAAGCAATCAAGGA+GGG + chr2_2:8731654-8731673 Msa0235880:CDS 35.0%
TAGAACTGAAATTGAGGCTT+TGG + chr2_2:8731825-8731844 Msa0235880:CDS 35.0%
CTACAGTTTCTGTGCTTAAA+GGG + chr2_2:8731884-8731903 Msa0235880:CDS 35.0%
! GATGAGCATGATTTGGAAAA+TGG + chr2_2:8731958-8731977 Msa0235880:CDS 35.0%
AAGTCAGAAGAAGATCAAGA+AGG + chr2_2:8731981-8732000 Msa0235880:CDS 35.0%
AGTCAGAAGAAGATCAAGAA+GGG + chr2_2:8731982-8732001 Msa0235880:CDS 35.0%
TCATCAAATCCAACGATATC+GGG - chr2_2:8732065-8732084 None:intergenic 35.0%
CTCATCAAATCCAACGATAT+CGG - chr2_2:8732066-8732085 None:intergenic 35.0%
AAGATTTGCAGTTGCTCTAT+TGG - chr2_2:8732343-8732362 None:intergenic 35.0%
ATTCGATTGCTTGCAAAAAC+CGG + chr2_2:8732420-8732439 Msa0235880:CDS 35.0%
TTCCTGATTCACTAATGCTT+TGG - chr2_2:8732952-8732971 None:intergenic 35.0%
! TAGTAGCGTTTGAAGTAATC+CGG - chr2_2:8733114-8733133 None:intergenic 35.0%
CTTCAAACGCTACTATTTAC+CGG + chr2_2:8733119-8733138 Msa0235880:CDS 35.0%
TTCAAACGCTACTATTTACC+GGG + chr2_2:8733120-8733139 Msa0235880:CDS 35.0%
GAAAATGCATCTCTGCATTA+TGG + chr2_2:8733197-8733216 Msa0235880:CDS 35.0%
TGATTTAAGCGACGTTGCTT+TGG + chr2_2:8731249-8731268 Msa0235880:CDS 40.0%
CTCATTCACAACCGTTACAA+GGG - chr2_2:8731281-8731300 None:intergenic 40.0%
!! AGCGTTCATTTTTCTTCCAG+AGG + chr2_2:8731320-8731339 Msa0235880:CDS 40.0%
!!! TGAGGTTTTTCAGGTTCTGT+TGG + chr2_2:8731372-8731391 Msa0235880:CDS 40.0%
! TCAAGAGATTTCGACGCTTT+TGG + chr2_2:8731573-8731592 Msa0235880:CDS 40.0%
ATATGGAGGATGATGCTCTT+AGG + chr2_2:8731692-8731711 Msa0235880:CDS 40.0%
TATGGAGGATGATGCTCTTA+GGG + chr2_2:8731693-8731712 Msa0235880:CDS 40.0%
TTGATCAGTTTGAGAATGGG+AGG + chr2_2:8731734-8731753 Msa0235880:CDS 40.0%
! AACTGAAATTGAGGCTTTGG+AGG + chr2_2:8731828-8731847 Msa0235880:CDS 40.0%
GAGCAGATTGTTAACCATGA+GGG + chr2_2:8731850-8731869 Msa0235880:CDS 40.0%
CCTTTAAGCACAGAAACTGT+AGG - chr2_2:8731886-8731905 None:intergenic 40.0%
CCTACAGTTTCTGTGCTTAA+AGG + chr2_2:8731883-8731902 Msa0235880:CDS 40.0%
AGTTTCTGTGCTTAAAGGGT+TGG + chr2_2:8731888-8731907 Msa0235880:CDS 40.0%
TGAGGAAGATGAGCATGATT+TGG + chr2_2:8731951-8731970 Msa0235880:CDS 40.0%
GTTGGATTTGATGAGAGATC+CGG + chr2_2:8732071-8732090 Msa0235880:CDS 40.0%
GCTCCTATCATAAGTTTGAC+CGG - chr2_2:8732109-8732128 None:intergenic 40.0%
ATGATAGGAGCTCCATTTCT+AGG + chr2_2:8732118-8732137 Msa0235880:CDS 40.0%
TTCATCCATCCACCTAGAAA+TGG - chr2_2:8732133-8732152 None:intergenic 40.0%
! ATTTCTAGGTGGATGGATGA+AGG + chr2_2:8732132-8732151 Msa0235880:CDS 40.0%
TTTCTAGGTGGATGGATGAA+GGG + chr2_2:8732133-8732152 Msa0235880:CDS 40.0%
CAAGTGTTTGACCTGTCTTT+GGG - chr2_2:8732170-8732189 None:intergenic 40.0%
AAATTCCTCAAGGCACGATT+CGG - chr2_2:8732210-8732229 None:intergenic 40.0%
CTGCACAATCAAATTCCTCA+AGG - chr2_2:8732220-8732239 None:intergenic 40.0%
TGAGGAATTTGATTGTGCAG+TGG + chr2_2:8732220-8732239 Msa0235880:CDS 40.0%
!! AGTTGCTCTATTGGCTTCAA+GGG - chr2_2:8732334-8732353 None:intergenic 40.0%
CTCATTCAACAACTCGCTAA+TGG + chr2_2:8732363-8732382 Msa0235880:CDS 40.0%
GAAAGCAAGTCCCTAAGATA+AGG - chr2_2:8732486-8732505 None:intergenic 40.0%
TTCTCCTGAGCAACAGAATT+AGG - chr2_2:8732513-8732532 None:intergenic 40.0%
TGTGTTAGAATGATTGAGGC+AGG + chr2_2:8732831-8732850 Msa0235880:CDS 40.0%
! AGCAGTAACAGCTTTAGTTG+AGG + chr2_2:8732854-8732873 Msa0235880:CDS 40.0%
! ACAGCTTTAGTTGAGGCTTT+AGG + chr2_2:8732861-8732880 Msa0235880:CDS 40.0%
! CAGCTTTAGTTGAGGCTTTA+GGG + chr2_2:8732862-8732881 Msa0235880:CDS 40.0%
! AGCCAAAGCATTAGTGAATC+AGG + chr2_2:8732947-8732966 Msa0235880:CDS 40.0%
AGCATTAGTGAATCAGGAAG+AGG + chr2_2:8732953-8732972 Msa0235880:CDS 40.0%
TTGATAGGAATGATGCGTTG+TGG + chr2_2:8732987-8733006 Msa0235880:CDS 40.0%
AATGCATCTCTGCATTATGG+TGG + chr2_2:8733200-8733219 Msa0235880:CDS 40.0%
!! TCTCTGCATTATGGTGGATT+AGG + chr2_2:8733206-8733225 Msa0235880:CDS 40.0%
!! CATTATGGTGGATTAGGTGT+AGG + chr2_2:8733212-8733231 Msa0235880:CDS 40.0%
ATAGATTCAAGCTTTGCTGC+TGG + chr2_2:8733266-8733285 Msa0235880:CDS 40.0%
TAGATTCAAGCTTTGCTGCT+GGG + chr2_2:8733267-8733286 Msa0235880:CDS 40.0%
ACAGGTACAGAGATTGACAT+TGG - chr2_2:8733305-8733324 None:intergenic 40.0%
TGATTTAAGCGACGTTGCTT+TGG + chr2_2:8731249-8731268 Msa0235880:CDS 40.0%
CTCATTCACAACCGTTACAA+GGG - chr2_2:8731281-8731300 None:intergenic 40.0%
!! AGCGTTCATTTTTCTTCCAG+AGG + chr2_2:8731320-8731339 Msa0235880:CDS 40.0%
!!! TGAGGTTTTTCAGGTTCTGT+TGG + chr2_2:8731372-8731391 Msa0235880:CDS 40.0%
! TCAAGAGATTTCGACGCTTT+TGG + chr2_2:8731573-8731592 Msa0235880:CDS 40.0%
ATATGGAGGATGATGCTCTT+AGG + chr2_2:8731692-8731711 Msa0235880:CDS 40.0%
TATGGAGGATGATGCTCTTA+GGG + chr2_2:8731693-8731712 Msa0235880:CDS 40.0%
TTGATCAGTTTGAGAATGGG+AGG + chr2_2:8731734-8731753 Msa0235880:CDS 40.0%
! AACTGAAATTGAGGCTTTGG+AGG + chr2_2:8731828-8731847 Msa0235880:CDS 40.0%
GAGCAGATTGTTAACCATGA+GGG + chr2_2:8731850-8731869 Msa0235880:CDS 40.0%
CCTTTAAGCACAGAAACTGT+AGG - chr2_2:8731886-8731905 None:intergenic 40.0%
CCTACAGTTTCTGTGCTTAA+AGG + chr2_2:8731883-8731902 Msa0235880:CDS 40.0%
AGTTTCTGTGCTTAAAGGGT+TGG + chr2_2:8731888-8731907 Msa0235880:CDS 40.0%
TGAGGAAGATGAGCATGATT+TGG + chr2_2:8731951-8731970 Msa0235880:CDS 40.0%
GTTGGATTTGATGAGAGATC+CGG + chr2_2:8732071-8732090 Msa0235880:CDS 40.0%
GCTCCTATCATAAGTTTGAC+CGG - chr2_2:8732109-8732128 None:intergenic 40.0%
ATGATAGGAGCTCCATTTCT+AGG + chr2_2:8732118-8732137 Msa0235880:CDS 40.0%
TTCATCCATCCACCTAGAAA+TGG - chr2_2:8732133-8732152 None:intergenic 40.0%
! ATTTCTAGGTGGATGGATGA+AGG + chr2_2:8732132-8732151 Msa0235880:CDS 40.0%
TTTCTAGGTGGATGGATGAA+GGG + chr2_2:8732133-8732152 Msa0235880:CDS 40.0%
CAAGTGTTTGACCTGTCTTT+GGG - chr2_2:8732170-8732189 None:intergenic 40.0%
AAATTCCTCAAGGCACGATT+CGG - chr2_2:8732210-8732229 None:intergenic 40.0%
CTGCACAATCAAATTCCTCA+AGG - chr2_2:8732220-8732239 None:intergenic 40.0%
TGAGGAATTTGATTGTGCAG+TGG + chr2_2:8732220-8732239 Msa0235880:CDS 40.0%
!! AGTTGCTCTATTGGCTTCAA+GGG - chr2_2:8732334-8732353 None:intergenic 40.0%
CTCATTCAACAACTCGCTAA+TGG + chr2_2:8732363-8732382 Msa0235880:CDS 40.0%
GAAAGCAAGTCCCTAAGATA+AGG - chr2_2:8732486-8732505 None:intergenic 40.0%
TTCTCCTGAGCAACAGAATT+AGG - chr2_2:8732513-8732532 None:intergenic 40.0%
TGTGTTAGAATGATTGAGGC+AGG + chr2_2:8732831-8732850 Msa0235880:CDS 40.0%
! AGCAGTAACAGCTTTAGTTG+AGG + chr2_2:8732854-8732873 Msa0235880:CDS 40.0%
! ACAGCTTTAGTTGAGGCTTT+AGG + chr2_2:8732861-8732880 Msa0235880:CDS 40.0%
! CAGCTTTAGTTGAGGCTTTA+GGG + chr2_2:8732862-8732881 Msa0235880:CDS 40.0%
! AGCCAAAGCATTAGTGAATC+AGG + chr2_2:8732947-8732966 Msa0235880:CDS 40.0%
AGCATTAGTGAATCAGGAAG+AGG + chr2_2:8732953-8732972 Msa0235880:CDS 40.0%
TTGATAGGAATGATGCGTTG+TGG + chr2_2:8732987-8733006 Msa0235880:CDS 40.0%
AATGCATCTCTGCATTATGG+TGG + chr2_2:8733200-8733219 Msa0235880:CDS 40.0%
!! TCTCTGCATTATGGTGGATT+AGG + chr2_2:8733206-8733225 Msa0235880:CDS 40.0%
!! CATTATGGTGGATTAGGTGT+AGG + chr2_2:8733212-8733231 Msa0235880:CDS 40.0%
ATAGATTCAAGCTTTGCTGC+TGG + chr2_2:8733266-8733285 Msa0235880:CDS 40.0%
TAGATTCAAGCTTTGCTGCT+GGG + chr2_2:8733267-8733286 Msa0235880:CDS 40.0%
ACAGGTACAGAGATTGACAT+TGG - chr2_2:8733305-8733324 None:intergenic 40.0%
! GGGCAATTTTCTCATCTCTG+CGG + chr2_2:8731185-8731204 Msa0235880:CDS 45.0%
! CAATTTTCTCATCTCTGCGG+CGG + chr2_2:8731188-8731207 Msa0235880:CDS 45.0%
! ACCAACGTTGGAAGCTTTTC+TGG + chr2_2:8731219-8731238 Msa0235880:CDS 45.0%
GCAACGTCGCTTAAATCAAC+CGG - chr2_2:8731247-8731266 None:intergenic 45.0%
GCTCATTCACAACCGTTACA+AGG - chr2_2:8731282-8731301 None:intergenic 45.0%
!! GAAAGATTCTGGTTCGGGTT+CGG + chr2_2:8731402-8731421 Msa0235880:CDS 45.0%
GAGTAAGGATGTTAGGGAAC+AGG + chr2_2:8731624-8731643 Msa0235880:CDS 45.0%
GAATGGGAGGATTCCTGATT+CGG + chr2_2:8731747-8731766 Msa0235880:CDS 45.0%
CTTCGCAATTCTTCCGAATC+AGG - chr2_2:8731763-8731782 None:intergenic 45.0%
GGAGCAGATTGTTAACCATG+AGG + chr2_2:8731849-8731868 Msa0235880:CDS 45.0%
TAGGCTCAATATCACCCTCA+TGG - chr2_2:8731867-8731886 None:intergenic 45.0%
TTCTGTGCTTAAAGGGTTGG+TGG + chr2_2:8731891-8731910 Msa0235880:CDS 45.0%
AAACCTACAATACCGCGTCA+TGG - chr2_2:8731917-8731936 None:intergenic 45.0%
ATCGGGCAACAAAAGTCCTT+TGG - chr2_2:8732048-8732067 None:intergenic 45.0%
! CTTTTGTTGCCCGATATCGT+TGG + chr2_2:8732053-8732072 Msa0235880:CDS 45.0%
GATCCGGTGATTATTTCCAC+CGG + chr2_2:8732087-8732106 Msa0235880:CDS 45.0%
TGACCGGTGGAAATAATCAC+CGG - chr2_2:8732093-8732112 None:intergenic 45.0%
CCTATCATAAGTTTGACCGG+TGG - chr2_2:8732106-8732125 None:intergenic 45.0%
CCACCGGTCAAACTTATGAT+AGG + chr2_2:8732103-8732122 Msa0235880:CDS 45.0%
! ATAGGAGCTCCATTTCTAGG+TGG + chr2_2:8732121-8732140 Msa0235880:CDS 45.0%
CATACAACTTGCCCAAAGAC+AGG + chr2_2:8732156-8732175 Msa0235880:CDS 45.0%
GCAAGTGTTTGACCTGTCTT+TGG - chr2_2:8732171-8732190 None:intergenic 45.0%
AATTCCTCAAGGCACGATTC+GGG - chr2_2:8732209-8732228 None:intergenic 45.0%
!! CAGTTGCTCTATTGGCTTCA+AGG - chr2_2:8732335-8732354 None:intergenic 45.0%
TGGAAAGACTATAGCTGCCA+GGG + chr2_2:8732395-8732414 Msa0235880:CDS 45.0%
GGGGGCAATTCCTTATCTTA+GGG + chr2_2:8732473-8732492 Msa0235880:CDS 45.0%
CAAGAACAAAAGCCGGATCA+TGG + chr2_2:8732569-8732588 Msa0235880:CDS 45.0%
ATCTTGTAACAGCCCTGCTA+GGG - chr2_2:8732745-8732764 None:intergenic 45.0%
TAGCAGGGCTGTTACAAGAT+GGG + chr2_2:8732745-8732764 Msa0235880:CDS 45.0%
TTACAAGATGGGACTCCAAG+AGG + chr2_2:8732756-8732775 Msa0235880:CDS 45.0%
ACTGCATCCTTCTTTCCTCT+TGG - chr2_2:8732774-8732793 None:intergenic 45.0%
! AACACAATTCTCGGTGTGTG+TGG - chr2_2:8732817-8732836 None:intergenic 45.0%
!! GTTGAGGCTTTAGGGAATGA+AGG + chr2_2:8732870-8732889 Msa0235880:CDS 45.0%
TTGATCGTTCGACAGCCTTT+CGG + chr2_2:8732924-8732943 Msa0235880:CDS 45.0%
! ACTAATGCTTTGGCTCCGAA+AGG - chr2_2:8732942-8732961 None:intergenic 45.0%
CAGCATTGCTCGAGTTATGT+CGG + chr2_2:8733039-8733058 Msa0235880:CDS 45.0%
AGGTTCAGCTGCAACTGAAA+GGG + chr2_2:8733067-8733086 Msa0235880:CDS 45.0%
TGCAACTGAAAGGGTGGTTA+AGG + chr2_2:8733076-8733095 Msa0235880:CDS 45.0%
TGAAGTAATCCGGCAATAGC+TGG - chr2_2:8733104-8733123 None:intergenic 45.0%
AGATTCAAGCTTTGCTGCTG+GGG + chr2_2:8733268-8733287 Msa0235880:CDS 45.0%
! GGGCAATTTTCTCATCTCTG+CGG + chr2_2:8731185-8731204 Msa0235880:CDS 45.0%
! CAATTTTCTCATCTCTGCGG+CGG + chr2_2:8731188-8731207 Msa0235880:CDS 45.0%
! ACCAACGTTGGAAGCTTTTC+TGG + chr2_2:8731219-8731238 Msa0235880:CDS 45.0%
GCAACGTCGCTTAAATCAAC+CGG - chr2_2:8731247-8731266 None:intergenic 45.0%
GCTCATTCACAACCGTTACA+AGG - chr2_2:8731282-8731301 None:intergenic 45.0%
!! GAAAGATTCTGGTTCGGGTT+CGG + chr2_2:8731402-8731421 Msa0235880:CDS 45.0%
GAGTAAGGATGTTAGGGAAC+AGG + chr2_2:8731624-8731643 Msa0235880:CDS 45.0%
GAATGGGAGGATTCCTGATT+CGG + chr2_2:8731747-8731766 Msa0235880:CDS 45.0%
CTTCGCAATTCTTCCGAATC+AGG - chr2_2:8731763-8731782 None:intergenic 45.0%
GGAGCAGATTGTTAACCATG+AGG + chr2_2:8731849-8731868 Msa0235880:CDS 45.0%
TAGGCTCAATATCACCCTCA+TGG - chr2_2:8731867-8731886 None:intergenic 45.0%
TTCTGTGCTTAAAGGGTTGG+TGG + chr2_2:8731891-8731910 Msa0235880:CDS 45.0%
AAACCTACAATACCGCGTCA+TGG - chr2_2:8731917-8731936 None:intergenic 45.0%
ATCGGGCAACAAAAGTCCTT+TGG - chr2_2:8732048-8732067 None:intergenic 45.0%
! CTTTTGTTGCCCGATATCGT+TGG + chr2_2:8732053-8732072 Msa0235880:CDS 45.0%
GATCCGGTGATTATTTCCAC+CGG + chr2_2:8732087-8732106 Msa0235880:CDS 45.0%
TGACCGGTGGAAATAATCAC+CGG - chr2_2:8732093-8732112 None:intergenic 45.0%
CCTATCATAAGTTTGACCGG+TGG - chr2_2:8732106-8732125 None:intergenic 45.0%
CCACCGGTCAAACTTATGAT+AGG + chr2_2:8732103-8732122 Msa0235880:CDS 45.0%
! ATAGGAGCTCCATTTCTAGG+TGG + chr2_2:8732121-8732140 Msa0235880:CDS 45.0%
CATACAACTTGCCCAAAGAC+AGG + chr2_2:8732156-8732175 Msa0235880:CDS 45.0%
GCAAGTGTTTGACCTGTCTT+TGG - chr2_2:8732171-8732190 None:intergenic 45.0%
AATTCCTCAAGGCACGATTC+GGG - chr2_2:8732209-8732228 None:intergenic 45.0%
!! CAGTTGCTCTATTGGCTTCA+AGG - chr2_2:8732335-8732354 None:intergenic 45.0%
TGGAAAGACTATAGCTGCCA+GGG + chr2_2:8732395-8732414 Msa0235880:CDS 45.0%
GGGGGCAATTCCTTATCTTA+GGG + chr2_2:8732473-8732492 Msa0235880:CDS 45.0%
CAAGAACAAAAGCCGGATCA+TGG + chr2_2:8732569-8732588 Msa0235880:CDS 45.0%
ATCTTGTAACAGCCCTGCTA+GGG - chr2_2:8732745-8732764 None:intergenic 45.0%
TAGCAGGGCTGTTACAAGAT+GGG + chr2_2:8732745-8732764 Msa0235880:CDS 45.0%
TTACAAGATGGGACTCCAAG+AGG + chr2_2:8732756-8732775 Msa0235880:CDS 45.0%
ACTGCATCCTTCTTTCCTCT+TGG - chr2_2:8732774-8732793 None:intergenic 45.0%
! AACACAATTCTCGGTGTGTG+TGG - chr2_2:8732817-8732836 None:intergenic 45.0%
!! GTTGAGGCTTTAGGGAATGA+AGG + chr2_2:8732870-8732889 Msa0235880:CDS 45.0%
TTGATCGTTCGACAGCCTTT+CGG + chr2_2:8732924-8732943 Msa0235880:CDS 45.0%
! ACTAATGCTTTGGCTCCGAA+AGG - chr2_2:8732942-8732961 None:intergenic 45.0%
CAGCATTGCTCGAGTTATGT+CGG + chr2_2:8733039-8733058 Msa0235880:CDS 45.0%
AGGTTCAGCTGCAACTGAAA+GGG + chr2_2:8733067-8733086 Msa0235880:CDS 45.0%
TGCAACTGAAAGGGTGGTTA+AGG + chr2_2:8733076-8733095 Msa0235880:CDS 45.0%
TGAAGTAATCCGGCAATAGC+TGG - chr2_2:8733104-8733123 None:intergenic 45.0%
AGATTCAAGCTTTGCTGCTG+GGG + chr2_2:8733268-8733287 Msa0235880:CDS 45.0%
GCCAGAAAAGCTTCCAACGT+TGG - chr2_2:8731223-8731242 None:intergenic 50.0%
!!! GTTGGAAGCTTTTCTGGCTC+CGG + chr2_2:8731225-8731244 Msa0235880:CDS 50.0%
AGACAAAGCAACCCAGTAGC+CGG - chr2_2:8731433-8731452 None:intergenic 50.0%
! GAGCTCCATTTCTAGGTGGA+TGG + chr2_2:8732125-8732144 Msa0235880:CDS 50.0%
AATTCCCCTTGAACCACCAG+AGG + chr2_2:8732257-8732276 Msa0235880:CDS 50.0%
ATCACCTCTGGTGGTTCAAG+GGG - chr2_2:8732264-8732283 None:intergenic 50.0%
CATCACCTCTGGTGGTTCAA+GGG - chr2_2:8732265-8732284 None:intergenic 50.0%
ATTGCTTCCATCACCTCTGG+TGG - chr2_2:8732273-8732292 None:intergenic 50.0%
!! ACCAGAGGTGATGGAAGCAA+TGG + chr2_2:8732272-8732291 Msa0235880:CDS 50.0%
!! CCAGAGGTGATGGAAGCAAT+GGG + chr2_2:8732273-8732292 Msa0235880:CDS 50.0%
! ATTGGCTTCAAGGGCAGCTT+TGG - chr2_2:8732325-8732344 None:intergenic 50.0%
! CTCGCTAATGGATCGCAATC+TGG + chr2_2:8732375-8732394 Msa0235880:CDS 50.0%
CTGGAAAGACTATAGCTGCC+AGG + chr2_2:8732394-8732413 Msa0235880:CDS 50.0%
TGCAAGCAATCGAATCTCCC+TGG - chr2_2:8732415-8732434 None:intergenic 50.0%
!! GAAAGCGCGATTTTCTCTGC+CGG - chr2_2:8732442-8732461 None:intergenic 50.0%
CGGGGGCAATTCCTTATCTT+AGG + chr2_2:8732472-8732491 Msa0235880:CDS 50.0%
GTCGCCTAATTCTGTTGCTC+AGG + chr2_2:8732506-8732525 Msa0235880:CDS 50.0%
AACTTGCCTCGTCCATGATC+CGG - chr2_2:8732584-8732603 None:intergenic 50.0%
TCGGGCATACAACAGAAGCA+AGG + chr2_2:8732634-8732653 Msa0235880:CDS 50.0%
CGGGCATACAACAGAAGCAA+GGG + chr2_2:8732635-8732654 Msa0235880:CDS 50.0%
AAGATAATCGCGGACGAGAC+CGG + chr2_2:8732708-8732727 Msa0235880:CDS 50.0%
CATCTTGTAACAGCCCTGCT+AGG - chr2_2:8732746-8732765 None:intergenic 50.0%
CTAGCAGGGCTGTTACAAGA+TGG + chr2_2:8732744-8732763 Msa0235880:CDS 50.0%
TGGGACTCCAAGAGGAAAGA+AGG + chr2_2:8732764-8732783 Msa0235880:CDS 50.0%
CTGTCGAACGATCAAGGCTA+TGG - chr2_2:8732919-8732938 None:intergenic 50.0%
GAAAGGCTGTCGAACGATCA+AGG - chr2_2:8732925-8732944 None:intergenic 50.0%
AATCAGGAAGAGGCAGTAGC+TGG + chr2_2:8732963-8732982 Msa0235880:CDS 50.0%
ATCAGGAAGAGGCAGTAGCT+GGG + chr2_2:8732964-8732983 Msa0235880:CDS 50.0%
ACTGCATTCTCCTTACCCCT+CGG - chr2_2:8733017-8733036 None:intergenic 50.0%
TTGCTCGAGTTATGTCGGAG+TGG + chr2_2:8733044-8733063 Msa0235880:CDS 50.0%
GAGGTTCAGCTGCAACTGAA+AGG + chr2_2:8733066-8733085 Msa0235880:CDS 50.0%
TTCAGCTGCAACTGAAAGGG+TGG + chr2_2:8733070-8733089 Msa0235880:CDS 50.0%
! GTTAAGGCACCAGCTATTGC+CGG + chr2_2:8733092-8733111 Msa0235880:CDS 50.0%
GCCAGAAAAGCTTCCAACGT+TGG - chr2_2:8731223-8731242 None:intergenic 50.0%
!!! GTTGGAAGCTTTTCTGGCTC+CGG + chr2_2:8731225-8731244 Msa0235880:CDS 50.0%
AGACAAAGCAACCCAGTAGC+CGG - chr2_2:8731433-8731452 None:intergenic 50.0%
! GAGCTCCATTTCTAGGTGGA+TGG + chr2_2:8732125-8732144 Msa0235880:CDS 50.0%
AATTCCCCTTGAACCACCAG+AGG + chr2_2:8732257-8732276 Msa0235880:CDS 50.0%
ATCACCTCTGGTGGTTCAAG+GGG - chr2_2:8732264-8732283 None:intergenic 50.0%
CATCACCTCTGGTGGTTCAA+GGG - chr2_2:8732265-8732284 None:intergenic 50.0%
ATTGCTTCCATCACCTCTGG+TGG - chr2_2:8732273-8732292 None:intergenic 50.0%
!! ACCAGAGGTGATGGAAGCAA+TGG + chr2_2:8732272-8732291 Msa0235880:CDS 50.0%
!! CCAGAGGTGATGGAAGCAAT+GGG + chr2_2:8732273-8732292 Msa0235880:CDS 50.0%
! ATTGGCTTCAAGGGCAGCTT+TGG - chr2_2:8732325-8732344 None:intergenic 50.0%
! CTCGCTAATGGATCGCAATC+TGG + chr2_2:8732375-8732394 Msa0235880:CDS 50.0%
CTGGAAAGACTATAGCTGCC+AGG + chr2_2:8732394-8732413 Msa0235880:CDS 50.0%
TGCAAGCAATCGAATCTCCC+TGG - chr2_2:8732415-8732434 None:intergenic 50.0%
!! GAAAGCGCGATTTTCTCTGC+CGG - chr2_2:8732442-8732461 None:intergenic 50.0%
CGGGGGCAATTCCTTATCTT+AGG + chr2_2:8732472-8732491 Msa0235880:CDS 50.0%
GTCGCCTAATTCTGTTGCTC+AGG + chr2_2:8732506-8732525 Msa0235880:CDS 50.0%
AACTTGCCTCGTCCATGATC+CGG - chr2_2:8732584-8732603 None:intergenic 50.0%
TCGGGCATACAACAGAAGCA+AGG + chr2_2:8732634-8732653 Msa0235880:CDS 50.0%
CGGGCATACAACAGAAGCAA+GGG + chr2_2:8732635-8732654 Msa0235880:CDS 50.0%
AAGATAATCGCGGACGAGAC+CGG + chr2_2:8732708-8732727 Msa0235880:CDS 50.0%
CATCTTGTAACAGCCCTGCT+AGG - chr2_2:8732746-8732765 None:intergenic 50.0%
CTAGCAGGGCTGTTACAAGA+TGG + chr2_2:8732744-8732763 Msa0235880:CDS 50.0%
TGGGACTCCAAGAGGAAAGA+AGG + chr2_2:8732764-8732783 Msa0235880:CDS 50.0%
CTGTCGAACGATCAAGGCTA+TGG - chr2_2:8732919-8732938 None:intergenic 50.0%
GAAAGGCTGTCGAACGATCA+AGG - chr2_2:8732925-8732944 None:intergenic 50.0%
AATCAGGAAGAGGCAGTAGC+TGG + chr2_2:8732963-8732982 Msa0235880:CDS 50.0%
ATCAGGAAGAGGCAGTAGCT+GGG + chr2_2:8732964-8732983 Msa0235880:CDS 50.0%
ACTGCATTCTCCTTACCCCT+CGG - chr2_2:8733017-8733036 None:intergenic 50.0%
TTGCTCGAGTTATGTCGGAG+TGG + chr2_2:8733044-8733063 Msa0235880:CDS 50.0%
GAGGTTCAGCTGCAACTGAA+AGG + chr2_2:8733066-8733085 Msa0235880:CDS 50.0%
TTCAGCTGCAACTGAAAGGG+TGG + chr2_2:8733070-8733089 Msa0235880:CDS 50.0%
! GTTAAGGCACCAGCTATTGC+CGG + chr2_2:8733092-8733111 Msa0235880:CDS 50.0%
! TGGTTCGGGTTCGGTTCTTC+CGG + chr2_2:8731411-8731430 Msa0235880:CDS 55.0%
GTTCGGTTCTTCCGGCTACT+GGG + chr2_2:8731419-8731438 Msa0235880:CDS 55.0%
GCGCGCAATCGAGTAAGTTG+TGG + chr2_2:8731503-8731522 Msa0235880:CDS 55.0%
TGGCCATGACGCGGTATTGT+AGG + chr2_2:8731911-8731930 Msa0235880:CDS 55.0%
TTGTCCCGAATCGTGCCTTG+AGG + chr2_2:8732202-8732221 Msa0235880:CDS 55.0%
GTGCAGTGGTGTAGTGCTCA+TGG + chr2_2:8732234-8732253 Msa0235880:CDS 55.0%
CCATCACCTCTGGTGGTTCA+AGG - chr2_2:8732266-8732285 None:intergenic 55.0%
CCTTGAACCACCAGAGGTGA+TGG + chr2_2:8732263-8732282 Msa0235880:CDS 55.0%
CCCATTGCTTCCATCACCTC+TGG - chr2_2:8732276-8732295 None:intergenic 55.0%
! GCTTCAAGGGCAGCTTTGGT+GGG - chr2_2:8732321-8732340 None:intergenic 55.0%
TCGCGCTTTCCTTGCAGAAG+CGG + chr2_2:8732452-8732471 Msa0235880:CDS 55.0%
CAAAAGCCGGATCATGGACG+AGG + chr2_2:8732575-8732594 Msa0235880:CDS 55.0%
TGCTAGGGCTTCAACAGCTC+CGG - chr2_2:8732730-8732749 None:intergenic 55.0%
GAGCTGTTGAAGCCCTAGCA+GGG + chr2_2:8732730-8732749 Msa0235880:CDS 55.0%
AGGGAATGAAGGAGTTGCCG+AGG + chr2_2:8732881-8732900 Msa0235880:CDS 55.0%
!! GAGGCAGTAGCTGGGTTGAT+AGG + chr2_2:8732972-8732991 Msa0235880:CDS 55.0%
CTCGAGTTATGTCGGAGTGG+AGG + chr2_2:8733047-8733066 Msa0235880:CDS 55.0%
! ACGTCTAGCTCGCTTTGTCC+CGG - chr2_2:8733141-8733160 None:intergenic 55.0%
! TGGTTCGGGTTCGGTTCTTC+CGG + chr2_2:8731411-8731430 Msa0235880:CDS 55.0%
GTTCGGTTCTTCCGGCTACT+GGG + chr2_2:8731419-8731438 Msa0235880:CDS 55.0%
GCGCGCAATCGAGTAAGTTG+TGG + chr2_2:8731503-8731522 Msa0235880:CDS 55.0%
TGGCCATGACGCGGTATTGT+AGG + chr2_2:8731911-8731930 Msa0235880:CDS 55.0%
TTGTCCCGAATCGTGCCTTG+AGG + chr2_2:8732202-8732221 Msa0235880:CDS 55.0%
GTGCAGTGGTGTAGTGCTCA+TGG + chr2_2:8732234-8732253 Msa0235880:CDS 55.0%
CCATCACCTCTGGTGGTTCA+AGG - chr2_2:8732266-8732285 None:intergenic 55.0%
CCTTGAACCACCAGAGGTGA+TGG + chr2_2:8732263-8732282 Msa0235880:CDS 55.0%
CCCATTGCTTCCATCACCTC+TGG - chr2_2:8732276-8732295 None:intergenic 55.0%
! GCTTCAAGGGCAGCTTTGGT+GGG - chr2_2:8732321-8732340 None:intergenic 55.0%
TCGCGCTTTCCTTGCAGAAG+CGG + chr2_2:8732452-8732471 Msa0235880:CDS 55.0%
CAAAAGCCGGATCATGGACG+AGG + chr2_2:8732575-8732594 Msa0235880:CDS 55.0%
TGCTAGGGCTTCAACAGCTC+CGG - chr2_2:8732730-8732749 None:intergenic 55.0%
GAGCTGTTGAAGCCCTAGCA+GGG + chr2_2:8732730-8732749 Msa0235880:CDS 55.0%
AGGGAATGAAGGAGTTGCCG+AGG + chr2_2:8732881-8732900 Msa0235880:CDS 55.0%
!! GAGGCAGTAGCTGGGTTGAT+AGG + chr2_2:8732972-8732991 Msa0235880:CDS 55.0%
CTCGAGTTATGTCGGAGTGG+AGG + chr2_2:8733047-8733066 Msa0235880:CDS 55.0%
! ACGTCTAGCTCGCTTTGTCC+CGG - chr2_2:8733141-8733160 None:intergenic 55.0%
GCGGCGAAGATCACCAACGT+TGG + chr2_2:8731207-8731226 Msa0235880:CDS 60.0%
! GGTTCGGTTCTTCCGGCTAC+TGG + chr2_2:8731418-8731437 Msa0235880:CDS 60.0%
!! AAGGGTTGGTGGCCATGACG+CGG + chr2_2:8731902-8731921 Msa0235880:CDS 60.0%
! GGCTTCAAGGGCAGCTTTGG+TGG - chr2_2:8732322-8732341 None:intergenic 60.0%
CGCGCTTTCCTTGCAGAAGC+GGG + chr2_2:8732453-8732472 Msa0235880:CDS 60.0%
GCGCTTTCCTTGCAGAAGCG+GGG + chr2_2:8732454-8732473 Msa0235880:CDS 60.0%
CGCTTTCCTTGCAGAAGCGG+GGG + chr2_2:8732455-8732474 Msa0235880:CDS 60.0%
GAATTGCCCCCGCTTCTGCA+AGG - chr2_2:8732464-8732483 None:intergenic 60.0%
GGAGCTGTTGAAGCCCTAGC+AGG + chr2_2:8732729-8732748 Msa0235880:CDS 60.0%
AGGAGTTGCCGAGGAAGCAG+CGG + chr2_2:8732890-8732909 Msa0235880:CDS 60.0%
TATGGCACCCGCTGCTTCCT+CGG - chr2_2:8732901-8732920 None:intergenic 60.0%
TGATGCGTTGTGGAACGCCG+AGG + chr2_2:8732997-8733016 Msa0235880:CDS 60.0%
GATGCGTTGTGGAACGCCGA+GGG + chr2_2:8732998-8733017 Msa0235880:CDS 60.0%
ATGCGTTGTGGAACGCCGAG+GGG + chr2_2:8732999-8733018 Msa0235880:CDS 60.0%
TTGTGGAACGCCGAGGGGTA+AGG + chr2_2:8733004-8733023 Msa0235880:CDS 60.0%
GCGGCGAAGATCACCAACGT+TGG + chr2_2:8731207-8731226 Msa0235880:CDS 60.0%
! GGTTCGGTTCTTCCGGCTAC+TGG + chr2_2:8731418-8731437 Msa0235880:CDS 60.0%
!! AAGGGTTGGTGGCCATGACG+CGG + chr2_2:8731902-8731921 Msa0235880:CDS 60.0%
! GGCTTCAAGGGCAGCTTTGG+TGG - chr2_2:8732322-8732341 None:intergenic 60.0%
CGCGCTTTCCTTGCAGAAGC+GGG + chr2_2:8732453-8732472 Msa0235880:CDS 60.0%
GCGCTTTCCTTGCAGAAGCG+GGG + chr2_2:8732454-8732473 Msa0235880:CDS 60.0%
CGCTTTCCTTGCAGAAGCGG+GGG + chr2_2:8732455-8732474 Msa0235880:CDS 60.0%
GAATTGCCCCCGCTTCTGCA+AGG - chr2_2:8732464-8732483 None:intergenic 60.0%
GGAGCTGTTGAAGCCCTAGC+AGG + chr2_2:8732729-8732748 Msa0235880:CDS 60.0%
AGGAGTTGCCGAGGAAGCAG+CGG + chr2_2:8732890-8732909 Msa0235880:CDS 60.0%
TATGGCACCCGCTGCTTCCT+CGG - chr2_2:8732901-8732920 None:intergenic 60.0%
TGATGCGTTGTGGAACGCCG+AGG + chr2_2:8732997-8733016 Msa0235880:CDS 60.0%
GATGCGTTGTGGAACGCCGA+GGG + chr2_2:8732998-8733017 Msa0235880:CDS 60.0%
ATGCGTTGTGGAACGCCGAG+GGG + chr2_2:8732999-8733018 Msa0235880:CDS 60.0%
TTGTGGAACGCCGAGGGGTA+AGG + chr2_2:8733004-8733023 Msa0235880:CDS 60.0%
GGAGTTGCCGAGGAAGCAGC+GGG + chr2_2:8732891-8732910 Msa0235880:CDS 65.0%
GGAGTTGCCGAGGAAGCAGC+GGG + chr2_2:8732891-8732910 Msa0235880:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 8731175 8733331 8731175 ID=Msa0235880;Name=Msa0235880
chr2_2 mRNA 8731175 8733331 8731175 ID=Msa0235880-mRNA-1;Parent=Msa0235880;Name=Msa0235880-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|718
chr2_2 exon 8731175 8733331 8731175 ID=Msa0235880-mRNA-1:exon:3768;Parent=Msa0235880-mRNA-1
chr2_2 CDS 8731175 8733331 8731175 ID=Msa0235880-mRNA-1:cds;Parent=Msa0235880-mRNA-1
Gene Sequence

>Msa0235880

ATGGCTTCAGGGGCAATTTTCTCATCTCTGCGGCGGCGAAGATCACCAACGTTGGAAGCTTTTCTGGCTCCGGTTGATTTAAGCGACGTTGCTTTGGTTCAAACCCTTGTAACGGTTGTGAATGAGCTTGTGTGTTGTTTTTCAAAGCGTTCATTTTTCTTCCAGAGGAAAAATACACGTTCTTTGATTAGAAAAGTTGAGGTTTTTCAGGTTCTGTTGGAGTATTTGAAAGATTCTGGTTCGGGTTCGGTTCTTCCGGCTACTGGGTTGCTTTGTCTGAAAGAGCTTTATTTGTTGCTGTATAGGTCAAAGATTCTGCTTGATTATTGCGCGCAATCGAGTAAGTTGTGGCTTTTGCTTCAAAATCATTCAATTTCGGGTCATTTTCATGATTTGAATCAAGAGATTTCGACGCTTTTGGATGTTTTTCCTGTTAAGGATGTTTGTTTGAGTAAGGATGTTAGGGAACAGGTTGAGCTTTTGTTGAAGCAATCAAGGAGGGCTAAGCTTTTTATTGATATGGAGGATGATGCTCTTAGGGTTCGTTTCTTTGAGTTTCTTGATCAGTTTGAGAATGGGAGGATTCCTGATTCGGAAGAATTGCGAAGTTTTTACGTTGATAAGTTGCAGATTATGAATGCTGCTTGTTGTAGAACTGAAATTGAGGCTTTGGAGGAGCAGATTGTTAACCATGAGGGTGATATTGAGCCTACAGTTTCTGTGCTTAAAGGGTTGGTGGCCATGACGCGGTATTGTAGGTTTTTGATATTTGGATTTGAGGAAGATGAGCATGATTTGGAAAATGGAAGTCAGAAGAAGATCAAGAAGGGTTTGATTACTCAAGAAATTGCTGATACATTTTTAACTGTTCCAAAGGACTTTTGTTGCCCGATATCGTTGGATTTGATGAGAGATCCGGTGATTATTTCCACCGGTCAAACTTATGATAGGAGCTCCATTTCTAGGTGGATGGATGAAGGGCATACAACTTGCCCAAAGACAGGTCAAACACTTGCTCACACTCGTCTTGTCCCGAATCGTGCCTTGAGGAATTTGATTGTGCAGTGGTGTAGTGCTCATGGAATTCCCCTTGAACCACCAGAGGTGATGGAAGCAATGGGTGAAGCTTTTGCATCTGCTTGTCCCACCAAAGCTGCCCTTGAAGCCAATAGAGCAACTGCAAATCTTCTCATTCAACAACTCGCTAATGGATCGCAATCTGGAAAGACTATAGCTGCCAGGGAGATTCGATTGCTTGCAAAAACCGGCAGAGAAAATCGCGCTTTCCTTGCAGAAGCGGGGGCAATTCCTTATCTTAGGGACTTGCTTTCGTCGCCTAATTCTGTTGCTCAGGAGAATTCAGTTACTGCATTGCTCAACCTTTCCATATATGACAAGAACAAAAGCCGGATCATGGACGAGGCAAGTTGTCTTGTATCAATTGTTAATGTTTTGAGATTCGGGCATACAACAGAAGCAAGGGAAAATGCTGCTGCAACATTGTTCAGCTTATCAGCAGTTCATGACTATAAGAAGATAATCGCGGACGAGACCGGAGCTGTTGAAGCCCTAGCAGGGCTGTTACAAGATGGGACTCCAAGAGGAAAGAAGGATGCAGTAACAGCTTTGTTCAATCTTTCCACACACACCGAGAATTGTGTTAGAATGATTGAGGCAGGAGCAGTAACAGCTTTAGTTGAGGCTTTAGGGAATGAAGGAGTTGCCGAGGAAGCAGCGGGTGCCATAGCCTTGATCGTTCGACAGCCTTTCGGAGCCAAAGCATTAGTGAATCAGGAAGAGGCAGTAGCTGGGTTGATAGGAATGATGCGTTGTGGAACGCCGAGGGGTAAGGAGAATGCAGTCGCAGCATTGCTCGAGTTATGTCGGAGTGGAGGTTCAGCTGCAACTGAAAGGGTGGTTAAGGCACCAGCTATTGCCGGATTACTTCAAACGCTACTATTTACCGGGACAAAGCGAGCTAGACGTAAAGCTGCTTCACTTGCTAGAGTGTTTCAGAGATGTGAAAATGCATCTCTGCATTATGGTGGATTAGGTGTAGGCTATGCATTTGCTAGCAATTCAGCTCAAACTATAGATTCAAGCTTTGCTGCTGGGGATGTTTCAGTACCAATGTCAATCTCTGTACCTGTAATATAG
Protein sequence

>Msa0235880

MASGAIFSSLRRRRSPTLEAFLAPVDLSDVALVQTLVTVVNELVCCFSKRSFFFQRKNTRSLIRKVEVFQVLLEYLKDSGSGSVLPATGLLCLKELYLLLYRSKILLDYCAQSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPVKDVCLSKDVREQVELLLKQSRRAKLFIDMEDDALRVRFFEFLDQFENGRIPDSEELRSFYVDKLQIMNAACCRTEIEALEEQIVNHEGDIEPTVSVLKGLVAMTRYCRFLIFGFEEDEHDLENGSQKKIKKGLITQEIADTFLTVPKDFCCPISLDLMRDPVIISTGQTYDRSSISRWMDEGHTTCPKTGQTLAHTRLVPNRALRNLIVQWCSAHGIPLEPPEVMEAMGEAFASACPTKAALEANRATANLLIQQLANGSQSGKTIAAREIRLLAKTGRENRAFLAEAGAIPYLRDLLSSPNSVAQENSVTALLNLSIYDKNKSRIMDEASCLVSIVNVLRFGHTTEARENAAATLFSLSAVHDYKKIIADETGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTENCVRMIEAGAVTALVEALGNEGVAEEAAGAIALIVRQPFGAKALVNQEEAVAGLIGMMRCGTPRGKENAVAALLELCRSGGSAATERVVKAPAIAGLLQTLLFTGTKRARRKAASLARVFQRCENASLHYGGLGVGYAFASNSAQTIDSSFAAGDVSVPMSISVPVI*