Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893800 | XP_003619597.2 | 95.385 | 130 | 6 | 0 | 1 | 130 | 1 | 130 | 7.24e-75 | 228 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893800 | G7KMW6 | 95.385 | 130 | 6 | 0 | 1 | 130 | 1 | 130 | 3.46e-75 | 228 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0893800 | 0.805973 | 1.030604e-49 | -8.615850e-47 |
| Msa0011170 | Msa0893800 | 0.828600 | 8.216315e-55 | -8.615850e-47 |
| Msa0015390 | Msa0893800 | 0.801194 | 1.010092e-48 | -8.615850e-47 |
| Msa0017510 | Msa0893800 | 0.842704 | 2.197302e-58 | -8.615850e-47 |
| Msa0020930 | Msa0893800 | 0.808107 | 3.643990e-50 | -8.615850e-47 |
| Msa0025330 | Msa0893800 | 0.820794 | 5.681466e-53 | -8.615850e-47 |
| Msa0028640 | Msa0893800 | 0.805998 | 1.018355e-49 | -8.615850e-47 |
| Msa0031340 | Msa0893800 | 0.848938 | 4.454903e-60 | -8.615850e-47 |
| Msa0032920 | Msa0893800 | -0.811829 | 5.755910e-51 | -8.615850e-47 |
| Msa0043980 | Msa0893800 | 0.820082 | 8.278049e-53 | -8.615850e-47 |
| Msa0051020 | Msa0893800 | 0.801719 | 7.885138e-49 | -8.615850e-47 |
| Msa0052680 | Msa0893800 | 0.841246 | 5.337952e-58 | -8.615850e-47 |
| Msa0052730 | Msa0893800 | 0.834039 | 3.774451e-56 | -8.615850e-47 |
| Msa0053780 | Msa0893800 | 0.802701 | 4.951164e-49 | -8.615850e-47 |
| Msa0068680 | Msa0893800 | 0.819097 | 1.388547e-52 | -8.615850e-47 |
| Msa0072370 | Msa0893800 | 0.806502 | 7.974338e-50 | -8.615850e-47 |
| Msa0072900 | Msa0893800 | 0.809883 | 1.518359e-50 | -8.615850e-47 |
| Msa0074240 | Msa0893800 | 0.812297 | 4.550690e-51 | -8.615850e-47 |
| Msa0078650 | Msa0893800 | 0.823841 | 1.114661e-53 | -8.615850e-47 |
| Msa0084380 | Msa0893800 | 0.826979 | 2.015145e-54 | -8.615850e-47 |
| Msa0089630 | Msa0893800 | 0.807569 | 4.740116e-50 | -8.615850e-47 |
| Msa0090360 | Msa0893800 | 0.817591 | 3.045341e-52 | -8.615850e-47 |
| Msa0090520 | Msa0893800 | 0.805309 | 1.420865e-49 | -8.615850e-47 |
| Msa0097810 | Msa0893800 | 0.812708 | 3.700006e-51 | -8.615850e-47 |
| Msa0101270 | Msa0893800 | 0.808294 | 3.324279e-50 | -8.615850e-47 |
| Msa0108160 | Msa0893800 | 0.804250 | 2.363888e-49 | -8.615850e-47 |
| Msa0110970 | Msa0893800 | 0.805453 | 1.325373e-49 | -8.615850e-47 |
| Msa0112770 | Msa0893800 | 0.806400 | 8.378901e-50 | -8.615850e-47 |
| Msa0114060 | Msa0893800 | 0.824935 | 6.164006e-54 | -8.615850e-47 |
| Msa0607050 | Msa0893800 | 0.804359 | 2.243997e-49 | -8.615850e-47 |
| Msa0612960 | Msa0893800 | 0.818569 | 1.830255e-52 | -8.615850e-47 |
| Msa0615440 | Msa0893800 | 0.803982 | 2.688098e-49 | -8.615850e-47 |
| Msa0615710 | Msa0893800 | 0.801335 | 9.450859e-49 | -8.615850e-47 |
| Msa0616160 | Msa0893800 | 0.831105 | 2.015403e-55 | -8.615850e-47 |
| Msa0625720 | Msa0893800 | 0.820969 | 5.179194e-53 | -8.615850e-47 |
| Msa0627450 | Msa0893800 | 0.825165 | 5.438385e-54 | -8.615850e-47 |
| Msa0639430 | Msa0893800 | 0.804934 | 1.702341e-49 | -8.615850e-47 |
| Msa0661650 | Msa0893800 | 0.805261 | 1.453911e-49 | -8.615850e-47 |
| Msa0662340 | Msa0893800 | 0.819809 | 9.555282e-53 | -8.615850e-47 |
| Msa0662500 | Msa0893800 | 0.838185 | 3.340648e-57 | -8.615850e-47 |
| Msa0663390 | Msa0893800 | 0.837304 | 5.623992e-57 | -8.615850e-47 |
| Msa0667050 | Msa0893800 | 0.818741 | 1.673480e-52 | -8.615850e-47 |
| Msa0669520 | Msa0893800 | 0.816854 | 4.461270e-52 | -8.615850e-47 |
| Msa0677410 | Msa0893800 | 0.801367 | 9.311498e-49 | -8.615850e-47 |
| Msa0682330 | Msa0893800 | 0.808908 | 2.457763e-50 | -8.615850e-47 |
| Msa0684500 | Msa0893800 | 0.800617 | 1.324998e-48 | -8.615850e-47 |
| Msa0698490 | Msa0893800 | 0.807493 | 4.920815e-50 | -8.615850e-47 |
| Msa0698660 | Msa0893800 | 0.805534 | 1.274123e-49 | -8.615850e-47 |
| Msa0707250 | Msa0893800 | 0.815975 | 7.016782e-52 | -8.615850e-47 |
| Msa0708520 | Msa0893800 | 0.808728 | 2.685425e-50 | -8.615850e-47 |
| Msa0709400 | Msa0893800 | 0.815788 | 7.725831e-52 | -8.615850e-47 |
| Msa0710800 | Msa0893800 | 0.817059 | 4.013505e-52 | -8.615850e-47 |
| Msa0721280 | Msa0893800 | 0.814547 | 1.457065e-51 | -8.615850e-47 |
| Msa0727640 | Msa0893800 | 0.811176 | 7.978938e-51 | -8.615850e-47 |
| Msa0727710 | Msa0893800 | 0.832290 | 1.028718e-55 | -8.615850e-47 |
| Msa0733390 | Msa0893800 | 0.808125 | 3.611630e-50 | -8.615850e-47 |
| Msa0740510 | Msa0893800 | 0.826467 | 2.669248e-54 | -8.615850e-47 |
| Msa0741240 | Msa0893800 | 0.804721 | 1.885291e-49 | -8.615850e-47 |
| Msa0741840 | Msa0893800 | 0.800082 | 1.702687e-48 | -8.615850e-47 |
| Msa0745790 | Msa0893800 | 0.801642 | 8.177850e-49 | -8.615850e-47 |
| Msa0749760 | Msa0893800 | 0.817462 | 3.257515e-52 | -8.615850e-47 |
| Msa0762970 | Msa0893800 | 0.824699 | 7.004755e-54 | -8.615850e-47 |
| Msa0765240 | Msa0893800 | 0.812422 | 4.274525e-51 | -8.615850e-47 |
| Msa0765910 | Msa0893800 | 0.840152 | 1.033033e-57 | -8.615850e-47 |
| Msa0767300 | Msa0893800 | 0.820290 | 7.418133e-53 | -8.615850e-47 |
| Msa0770720 | Msa0893800 | 0.832996 | 6.871705e-56 | -8.615850e-47 |
| Msa0794730 | Msa0893800 | 0.801828 | 7.489160e-49 | -8.615850e-47 |
| Msa0803890 | Msa0893800 | 0.825254 | 5.181519e-54 | -8.615850e-47 |
| Msa0804730 | Msa0893800 | 0.801559 | 8.505117e-49 | -8.615850e-47 |
| Msa0808270 | Msa0893800 | 0.807503 | 4.895764e-50 | -8.615850e-47 |
| Msa0820770 | Msa0893800 | 0.828738 | 7.606156e-55 | -8.615850e-47 |
| Msa0820850 | Msa0893800 | 0.814705 | 1.344609e-51 | -8.615850e-47 |
| Msa0824660 | Msa0893800 | 0.810407 | 1.170493e-50 | -8.615850e-47 |
| Msa0828560 | Msa0893800 | 0.826480 | 2.650449e-54 | -8.615850e-47 |
| Msa0832120 | Msa0893800 | 0.801747 | 7.779934e-49 | -8.615850e-47 |
| Msa0832340 | Msa0893800 | 0.822374 | 2.451593e-53 | -8.615850e-47 |
| Msa0841940 | Msa0893800 | 0.800089 | 1.697063e-48 | -8.615850e-47 |
| Msa0121090 | Msa0893800 | 0.806147 | 9.475353e-50 | -8.615850e-47 |
| Msa0124060 | Msa0893800 | 0.802368 | 5.798625e-49 | -8.615850e-47 |
| Msa0126370 | Msa0893800 | 0.813238 | 2.831428e-51 | -8.615850e-47 |
| Msa0127800 | Msa0893800 | 0.802139 | 6.464527e-49 | -8.615850e-47 |
| Msa0137990 | Msa0893800 | 0.804019 | 2.640194e-49 | -8.615850e-47 |
| Msa0145580 | Msa0893800 | 0.800547 | 1.369357e-48 | -8.615850e-47 |
| Msa0151180 | Msa0893800 | 0.800352 | 1.500480e-48 | -8.615850e-47 |
| Msa0157290 | Msa0893800 | 0.842330 | 2.762116e-58 | -8.615850e-47 |
| Msa0159930 | Msa0893800 | 0.819389 | 1.191801e-52 | -8.615850e-47 |
| Msa0160130 | Msa0893800 | 0.816249 | 6.095622e-52 | -8.615850e-47 |
| Msa0168500 | Msa0893800 | 0.807414 | 5.113190e-50 | -8.615850e-47 |
| Msa0170570 | Msa0893800 | 0.831671 | 1.462773e-55 | -8.615850e-47 |
| Msa0171290 | Msa0893800 | 0.812131 | 4.947690e-51 | -8.615850e-47 |
| Msa0183900 | Msa0893800 | 0.805465 | 1.317650e-49 | -8.615850e-47 |
| Msa0184040 | Msa0893800 | 0.812191 | 4.799625e-51 | -8.615850e-47 |
| Msa0195630 | Msa0893800 | 0.827137 | 1.847192e-54 | -8.615850e-47 |
| Msa0211150 | Msa0893800 | 0.862242 | 5.823483e-64 | -8.615850e-47 |
| Msa0212990 | Msa0893800 | 0.829914 | 3.942122e-55 | -8.615850e-47 |
| Msa0216240 | Msa0893800 | 0.822532 | 2.252520e-53 | -8.615850e-47 |
| Msa0216910 | Msa0893800 | 0.816902 | 4.353049e-52 | -8.615850e-47 |
| Msa0218810 | Msa0893800 | 0.814141 | 1.792010e-51 | -8.615850e-47 |
| Msa0220580 | Msa0893800 | 0.809048 | 2.293771e-50 | -8.615850e-47 |
| Msa0223690 | Msa0893800 | 0.804367 | 2.235418e-49 | -8.615850e-47 |
| Msa0225100 | Msa0893800 | 0.814952 | 1.185584e-51 | -8.615850e-47 |
| Msa0228070 | Msa0893800 | 0.803993 | 2.673443e-49 | -8.615850e-47 |
| Msa0237410 | Msa0893800 | 0.827578 | 1.448258e-54 | -8.615850e-47 |
| Msa0366240 | Msa0893800 | 0.808775 | 2.623854e-50 | -8.615850e-47 |
| Msa0367870 | Msa0893800 | 0.825665 | 4.141252e-54 | -8.615850e-47 |
| Msa0376300 | Msa0893800 | 0.808231 | 3.427670e-50 | -8.615850e-47 |
| Msa0376310 | Msa0893800 | 0.821118 | 4.786463e-53 | -8.615850e-47 |
| Msa0376350 | Msa0893800 | 0.812941 | 3.290367e-51 | -8.615850e-47 |
| Msa0376630 | Msa0893800 | 0.813812 | 2.117792e-51 | -8.615850e-47 |
| Msa0388950 | Msa0893800 | 0.812844 | 3.455208e-51 | -8.615850e-47 |
| Msa0393080 | Msa0893800 | 0.821661 | 3.586232e-53 | -8.615850e-47 |
| Msa0395820 | Msa0893800 | 0.817588 | 3.051427e-52 | -8.615850e-47 |
| Msa0405570 | Msa0893800 | 0.816691 | 4.852727e-52 | -8.615850e-47 |
| Msa0410650 | Msa0893800 | 0.827292 | 1.696104e-54 | -8.615850e-47 |
| Msa0417270 | Msa0893800 | 0.820311 | 7.334719e-53 | -8.615850e-47 |
| Msa0417880 | Msa0893800 | 0.825471 | 4.605079e-54 | -8.615850e-47 |
| Msa0424790 | Msa0893800 | 0.813690 | 2.253297e-51 | -8.615850e-47 |
| Msa0425170 | Msa0893800 | 0.827072 | 1.914652e-54 | -8.615850e-47 |
| Msa0440750 | Msa0893800 | 0.845956 | 2.937684e-59 | -8.615850e-47 |
| Msa0452710 | Msa0893800 | 0.813477 | 2.510007e-51 | -8.615850e-47 |
| Msa0455040 | Msa0893800 | 0.807646 | 4.566547e-50 | -8.615850e-47 |
| Msa0464680 | Msa0893800 | 0.850018 | 2.227003e-60 | -8.615850e-47 |
| Msa0467490 | Msa0893800 | 0.815665 | 8.228065e-52 | -8.615850e-47 |
| Msa0469030 | Msa0893800 | 0.814861 | 1.241704e-51 | -8.615850e-47 |
| Msa0471670 | Msa0893800 | 0.807186 | 5.715021e-50 | -8.615850e-47 |
| Msa0479170 | Msa0893800 | 0.826857 | 2.155168e-54 | -8.615850e-47 |
| Msa0479970 | Msa0893800 | 0.823288 | 1.501717e-53 | -8.615850e-47 |
| Msa0481530 | Msa0893800 | 0.824612 | 7.343931e-54 | -8.615850e-47 |
| Msa0482340 | Msa0893800 | 0.807639 | 4.580679e-50 | -8.615850e-47 |
| Msa0243100 | Msa0893800 | 0.823810 | 1.133310e-53 | -8.615850e-47 |
| Msa0244860 | Msa0893800 | 0.823114 | 1.648595e-53 | -8.615850e-47 |
| Msa0249200 | Msa0893800 | 0.805984 | 1.025046e-49 | -8.615850e-47 |
| Msa0254790 | Msa0893800 | 0.805051 | 1.608961e-49 | -8.615850e-47 |
| Msa0257460 | Msa0893800 | 0.818202 | 2.217052e-52 | -8.615850e-47 |
| Msa0258310 | Msa0893800 | 0.820458 | 6.786337e-53 | -8.615850e-47 |
| Msa0259500 | Msa0893800 | 0.820964 | 5.193511e-53 | -8.615850e-47 |
| Msa0261340 | Msa0893800 | 0.809367 | 1.959572e-50 | -8.615850e-47 |
| Msa0264150 | Msa0893800 | 0.818902 | 1.538505e-52 | -8.615850e-47 |
| Msa0266180 | Msa0893800 | 0.801242 | 9.876726e-49 | -8.615850e-47 |
| Msa0267920 | Msa0893800 | 0.813031 | 3.143630e-51 | -8.615850e-47 |
| Msa0280090 | Msa0893800 | 0.804191 | 2.431839e-49 | -8.615850e-47 |
| Msa0283450 | Msa0893800 | 0.821556 | 3.791766e-53 | -8.615850e-47 |
| Msa0283520 | Msa0893800 | 0.814090 | 1.838528e-51 | -8.615850e-47 |
| Msa0284420 | Msa0893800 | 0.803607 | 3.215042e-49 | -8.615850e-47 |
| Msa0287650 | Msa0893800 | 0.819953 | 8.856659e-53 | -8.615850e-47 |
| Msa0287740 | Msa0893800 | 0.823472 | 1.359911e-53 | -8.615850e-47 |
| Msa0288100 | Msa0893800 | 0.823814 | 1.131072e-53 | -8.615850e-47 |
| Msa0291500 | Msa0893800 | 0.805657 | 1.201035e-49 | -8.615850e-47 |
| Msa0296740 | Msa0893800 | 0.814175 | 1.760817e-51 | -8.615850e-47 |
| Msa0297790 | Msa0893800 | 0.816396 | 5.650513e-52 | -8.615850e-47 |
| Msa0300270 | Msa0893800 | 0.811354 | 7.301184e-51 | -8.615850e-47 |
| Msa0300690 | Msa0893800 | 0.802640 | 5.096080e-49 | -8.615850e-47 |
| Msa0305700 | Msa0893800 | 0.812967 | 3.248039e-51 | -8.615850e-47 |
| Msa0309770 | Msa0893800 | 0.826246 | 3.014631e-54 | -8.615850e-47 |
| Msa0330340 | Msa0893800 | 0.808434 | 3.102661e-50 | -8.615850e-47 |
| Msa0332000 | Msa0893800 | 0.818104 | 2.333348e-52 | -8.615850e-47 |
| Msa0333030 | Msa0893800 | 0.807638 | 4.583449e-50 | -8.615850e-47 |
| Msa0334360 | Msa0893800 | 0.806461 | 8.133778e-50 | -8.615850e-47 |
| Msa0335800 | Msa0893800 | 0.815526 | 8.837003e-52 | -8.615850e-47 |
| Msa0340470 | Msa0893800 | 0.817111 | 3.905514e-52 | -8.615850e-47 |
| Msa0341050 | Msa0893800 | 0.841889 | 3.613660e-58 | -8.615850e-47 |
| Msa0341540 | Msa0893800 | 0.821182 | 4.624529e-53 | -8.615850e-47 |
| Msa0345970 | Msa0893800 | 0.821066 | 4.919465e-53 | -8.615850e-47 |
| Msa0357900 | Msa0893800 | 0.813002 | 3.191426e-51 | -8.615850e-47 |
| Msa0357990 | Msa0893800 | 0.805402 | 1.358588e-49 | -8.615850e-47 |
| Msa0359030 | Msa0893800 | 0.812669 | 3.773152e-51 | -8.615850e-47 |
| Msa0363200 | Msa0893800 | 0.812313 | 4.514977e-51 | -8.615850e-47 |
| Msa0363790 | Msa0893800 | 0.815540 | 8.775206e-52 | -8.615850e-47 |
| Msa0484780 | Msa0893800 | 0.805624 | 1.219995e-49 | -8.615850e-47 |
| Msa0488560 | Msa0893800 | 0.835864 | 1.309043e-56 | -8.615850e-47 |
| Msa0498060 | Msa0893800 | 0.805910 | 1.062610e-49 | -8.615850e-47 |
| Msa0507680 | Msa0893800 | 0.836428 | 9.409915e-57 | -8.615850e-47 |
| Msa0516170 | Msa0893800 | 0.810336 | 1.212551e-50 | -8.615850e-47 |
| Msa0529890 | Msa0893800 | 0.823163 | 1.605895e-53 | -8.615850e-47 |
| Msa0545070 | Msa0893800 | 0.809432 | 1.897549e-50 | -8.615850e-47 |
| Msa0545210 | Msa0893800 | 0.811091 | 8.326274e-51 | -8.615850e-47 |
| Msa0546680 | Msa0893800 | 0.823404 | 1.411000e-53 | -8.615850e-47 |
| Msa0547320 | Msa0893800 | 0.811846 | 5.707760e-51 | -8.615850e-47 |
| Msa0557070 | Msa0893800 | 0.815904 | 7.279232e-52 | -8.615850e-47 |
| Msa0558230 | Msa0893800 | 0.800017 | 1.755401e-48 | -8.615850e-47 |
| Msa0569200 | Msa0893800 | 0.814904 | 1.214834e-51 | -8.615850e-47 |
| Msa0569220 | Msa0893800 | 0.819518 | 1.113562e-52 | -8.615850e-47 |
| Msa0572840 | Msa0893800 | 0.829188 | 5.919303e-55 | -8.615850e-47 |
| Msa0574390 | Msa0893800 | 0.810404 | 1.172231e-50 | -8.615850e-47 |
| Msa0585300 | Msa0893800 | 0.810039 | 1.405340e-50 | -8.615850e-47 |
| Msa0585560 | Msa0893800 | 0.823559 | 1.297923e-53 | -8.615850e-47 |
| Msa0594660 | Msa0893800 | 0.810345 | 1.207101e-50 | -8.615850e-47 |
| Msa0601430 | Msa0893800 | 0.801256 | 9.812317e-49 | -8.615850e-47 |
| Msa0601750 | Msa0893800 | 0.806471 | 8.096048e-50 | -8.615850e-47 |
| Msa0602390 | Msa0893800 | 0.815454 | 9.169178e-52 | -8.615850e-47 |
| Msa0602460 | Msa0893800 | 0.804926 | 1.708521e-49 | -8.615850e-47 |
| Msa0842790 | Msa0893800 | 0.815369 | 9.576242e-52 | -8.615850e-47 |
| Msa0844240 | Msa0893800 | 0.801009 | 1.101898e-48 | -8.615850e-47 |
| Msa0861090 | Msa0893800 | 0.825687 | 4.091185e-54 | -8.615850e-47 |
| Msa0861130 | Msa0893800 | 0.804532 | 2.064922e-49 | -8.615850e-47 |
| Msa0861510 | Msa0893800 | 0.806913 | 6.528805e-50 | -8.615850e-47 |
| Msa0861530 | Msa0893800 | 0.800288 | 1.546485e-48 | -8.615850e-47 |
| Msa0861540 | Msa0893800 | 0.800635 | 1.314191e-48 | -8.615850e-47 |
| Msa0861600 | Msa0893800 | 0.806427 | 8.270949e-50 | -8.615850e-47 |
| Msa0861870 | Msa0893800 | 0.816281 | 5.995330e-52 | -8.615850e-47 |
| Msa0866270 | Msa0893800 | 0.804472 | 2.125333e-49 | -8.615850e-47 |
| Msa0866520 | Msa0893800 | 0.829528 | 4.895733e-55 | -8.615850e-47 |
| Msa0871270 | Msa0893800 | 0.806087 | 9.753684e-50 | -8.615850e-47 |
| Msa0875290 | Msa0893800 | 0.837896 | 3.965823e-57 | -8.615850e-47 |
| Msa0876190 | Msa0893800 | 0.800134 | 1.661699e-48 | -8.615850e-47 |
| Msa0878510 | Msa0893800 | 0.817455 | 3.268179e-52 | -8.615850e-47 |
| Msa0880140 | Msa0893800 | 0.841649 | 4.180091e-58 | -8.615850e-47 |
| Msa0893800 | Msa0897330 | 0.802070 | 6.679293e-49 | -8.615850e-47 |
| Msa0893800 | Msa0898750 | 0.850523 | 1.607146e-60 | -8.615850e-47 |
| Msa0893800 | Msa0902760 | 0.818931 | 1.514881e-52 | -8.615850e-47 |
| Msa0893800 | Msa0926370 | 0.802461 | 5.549971e-49 | -8.615850e-47 |
| Msa0893800 | Msa0928130 | 0.853561 | 2.202600e-61 | -8.615850e-47 |
| Msa0893800 | Msa0933230 | 0.800067 | 1.714471e-48 | -8.615850e-47 |
| Msa0893800 | Msa0934890 | 0.821129 | 4.757422e-53 | -8.615850e-47 |
| Msa0893800 | Msa0938220 | 0.822737 | 2.018084e-53 | -8.615850e-47 |
| Msa0893800 | Msa0947660 | 0.827511 | 1.502631e-54 | -8.615850e-47 |
| Msa0893800 | Msa0962840 | 0.809321 | 2.004814e-50 | -8.615850e-47 |
| Msa0893800 | Msa0963270 | 0.835981 | 1.222370e-56 | -8.615850e-47 |
| Msa0893800 | Msa0964310 | 0.873201 | 1.766910e-67 | -8.615850e-47 |
| Msa0893800 | Msa0966400 | 0.830258 | 3.249975e-55 | -8.615850e-47 |
| Msa0893800 | Msa0967870 | 0.815192 | 1.048450e-51 | -8.615850e-47 |
| Msa0893800 | Msa0968590 | 0.819908 | 9.072345e-53 | -8.615850e-47 |
| Msa0893800 | Msa0969520 | 0.815311 | 9.867518e-52 | -8.615850e-47 |
| Msa0893800 | Msa0969600 | 0.811386 | 7.185842e-51 | -8.615850e-47 |
| Msa0893800 | Msa0969730 | 0.804647 | 1.953641e-49 | -8.615850e-47 |
| Msa0893800 | Msa0969810 | 0.806591 | 7.637284e-50 | -8.615850e-47 |
| Msa0893800 | Msa0970030 | 0.800326 | 1.518609e-48 | -8.615850e-47 |
| Msa0893800 | Msa0971090 | 0.805042 | 1.615956e-49 | -8.615850e-47 |
| Msa0893800 | Msa0972100 | 0.826974 | 2.020749e-54 | -8.615850e-47 |
| Msa0893800 | Msa0974070 | 0.817351 | 3.448834e-52 | -8.615850e-47 |
| Msa0893800 | Msa0975340 | 0.800913 | 1.153005e-48 | -8.615850e-47 |
| Msa0893800 | Msa0980880 | 0.824799 | 6.637188e-54 | -8.615850e-47 |
| Msa0893800 | Msa0997970 | 0.813890 | 2.035732e-51 | -8.615850e-47 |
| Msa0893800 | Msa1006840 | 0.817609 | 3.017577e-52 | -8.615850e-47 |
| Msa0893800 | Msa1013400 | 0.829555 | 4.820998e-55 | -8.615850e-47 |
| Msa0893800 | Msa1016320 | 0.812037 | 5.186972e-51 | -8.615850e-47 |
| Msa0893800 | Msa1018980 | 0.804342 | 2.261974e-49 | -8.615850e-47 |
| Msa0893800 | Msa1019000 | 0.829631 | 4.621363e-55 | -8.615850e-47 |
| Msa0893800 | Msa1019430 | 0.825496 | 4.541265e-54 | -8.615850e-47 |
| Msa0893800 | Msa1019470 | 0.836332 | 9.956103e-57 | -8.615850e-47 |
| Msa0893800 | Msa1020670 | 0.808924 | 2.438314e-50 | -8.615850e-47 |
| Msa0893800 | Msa1023500 | 0.824371 | 8.368441e-54 | -8.615850e-47 |
| Msa0893800 | Msa1024740 | 0.803291 | 3.739044e-49 | -8.615850e-47 |
| Msa0893800 | Msa1028970 | 0.800109 | 1.681415e-48 | -8.615850e-47 |
| Msa0893800 | Msa1031930 | 0.846311 | 2.351908e-59 | -8.615850e-47 |
| Msa0893800 | Msa1035480 | 0.821123 | 4.773679e-53 | -8.615850e-47 |
| Msa0893800 | Msa1035960 | 0.821710 | 3.494420e-53 | -8.615850e-47 |
| Msa0893800 | Msa1036610 | 0.823087 | 1.672818e-53 | -8.615850e-47 |
| Msa0893800 | Msa1040400 | 0.823255 | 1.528723e-53 | -8.615850e-47 |
| Msa0893800 | Msa1051830 | 0.816548 | 5.224837e-52 | -8.615850e-47 |
| Msa0893800 | Msa1058750 | 0.801645 | 8.164615e-49 | -8.615850e-47 |
| Msa0893800 | Msa1075540 | 0.817676 | 2.914262e-52 | -8.615850e-47 |
| Msa0893800 | Msa1078170 | 0.826499 | 2.623488e-54 | -8.615850e-47 |
| Msa0893800 | Msa1081930 | 0.816215 | 6.202512e-52 | -8.615850e-47 |
| Msa0893800 | Msa1081980 | 0.812558 | 3.991252e-51 | -8.615850e-47 |
| Msa0893800 | Msa1082500 | 0.817462 | 3.257451e-52 | -8.615850e-47 |
| Msa0893800 | Msa1083840 | 0.801222 | 9.969833e-49 | -8.615850e-47 |
| Msa0893800 | Msa1085200 | 0.832963 | 7.003479e-56 | -8.615850e-47 |
| Msa0893800 | Msa1093530 | 0.821244 | 4.476633e-53 | -8.615850e-47 |
| Msa0893800 | Msa1100050 | 0.830805 | 2.387578e-55 | -8.615850e-47 |
| Msa0893800 | Msa1102770 | 0.800000 | 1.769106e-48 | -8.615850e-47 |
| Msa0893800 | Msa1109680 | 0.832774 | 7.802241e-56 | -8.615850e-47 |
| Msa0893800 | Msa1119480 | 0.814291 | 1.660132e-51 | -8.615850e-47 |
| Msa0893800 | Msa1121440 | 0.836293 | 1.018544e-56 | -8.615850e-47 |
| Msa0893800 | Msa1122520 | 0.808694 | 2.730340e-50 | -8.615850e-47 |
| Msa0893800 | Msa1123380 | 0.840935 | 6.443813e-58 | -8.615850e-47 |
| Msa0893800 | Msa1124110 | 0.817086 | 3.956345e-52 | -8.615850e-47 |
| Msa0893800 | Msa1124960 | 0.804908 | 1.723302e-49 | -8.615850e-47 |
| Msa0893800 | Msa1125940 | 0.823753 | 1.168998e-53 | -8.615850e-47 |
| Msa0893800 | Msa1131220 | 0.801621 | 8.258325e-49 | -8.615850e-47 |
| Msa0893800 | Msa1135470 | 0.804037 | 2.617673e-49 | -8.615850e-47 |
| Msa0893800 | Msa1137570 | 0.812736 | 3.649023e-51 | -8.615850e-47 |
| Msa0893800 | Msa1140210 | 0.848267 | 6.833496e-60 | -8.615850e-47 |
| Msa0893800 | Msa1142020 | 0.836386 | 9.645364e-57 | -8.615850e-47 |
| Msa0893800 | Msa1147280 | 0.830131 | 3.489699e-55 | -8.615850e-47 |
| Msa0893800 | Msa1147900 | 0.808471 | 3.047892e-50 | -8.615850e-47 |
| Msa0893800 | Msa1151910 | 0.815269 | 1.008157e-51 | -8.615850e-47 |
| Msa0893800 | Msa1154280 | 0.818762 | 1.654668e-52 | -8.615850e-47 |
| Msa0893800 | Msa1167340 | 0.821643 | 3.620200e-53 | -8.615850e-47 |
| Msa0893800 | Msa1168160 | 0.802324 | 5.920562e-49 | -8.615850e-47 |
| Msa0893800 | Msa1168950 | 0.807562 | 4.756786e-50 | -8.615850e-47 |
| Msa0893800 | Msa1173100 | 0.828124 | 1.070076e-54 | -8.615850e-47 |
| Msa0893800 | Msa1189070 | 0.818530 | 1.868102e-52 | -8.615850e-47 |
| Msa0893800 | Msa1199570 | 0.812415 | 4.287789e-51 | -8.615850e-47 |
| Msa0893800 | Msa1209460 | 0.827270 | 1.716670e-54 | -8.615850e-47 |
| Msa0893800 | Msa1218600 | 0.833842 | 4.226295e-56 | -8.615850e-47 |
| Msa0893800 | Msa1219010 | 0.801326 | 9.490248e-49 | -8.615850e-47 |
| Msa0893800 | Msa1221050 | 0.830609 | 2.667613e-55 | -8.615850e-47 |
| Msa0893800 | Msa1228590 | 0.807631 | 4.600164e-50 | -8.615850e-47 |
| Msa0893800 | Msa1244600 | 0.805235 | 1.472329e-49 | -8.615850e-47 |
| Msa0893800 | Msa1252140 | 0.812216 | 4.741187e-51 | -8.615850e-47 |
| Msa0893800 | Msa1253020 | 0.816015 | 6.873473e-52 | -8.615850e-47 |
| Msa0893800 | Msa1271990 | 0.812311 | 4.519232e-51 | -8.615850e-47 |
| Msa0893800 | Msa1272680 | 0.818190 | 2.230559e-52 | -8.615850e-47 |
| Msa0893800 | Msa1279400 | 0.822856 | 1.893485e-53 | -8.615850e-47 |
| Msa0893800 | Msa1283840 | 0.806047 | 9.945459e-50 | -8.615850e-47 |
| Msa0893800 | Msa1284550 | 0.832264 | 1.043647e-55 | -8.615850e-47 |
| Msa0893800 | Msa1284680 | 0.805184 | 1.509221e-49 | -8.615850e-47 |
| Msa0893800 | Msa1287190 | 0.800923 | 1.147424e-48 | -8.615850e-47 |
| Msa0893800 | Msa1287220 | 0.807663 | 4.528778e-50 | -8.615850e-47 |
| Msa0893800 | Msa1294820 | 0.809306 | 2.019474e-50 | -8.615850e-47 |
| Msa0893800 | Msa1297290 | 0.804821 | 1.796932e-49 | -8.615850e-47 |
| Msa0893800 | Msa1298370 | 0.800532 | 1.378967e-48 | -8.615850e-47 |
| Msa0893800 | Msa1303240 | 0.801180 | 1.016728e-48 | -8.615850e-47 |
| Msa0893800 | Msa1303250 | 0.801982 | 6.963104e-49 | -8.615850e-47 |
| Msa0893800 | Msa1309030 | 0.830888 | 2.277914e-55 | -8.615850e-47 |
| Msa0893800 | Msa1313140 | 0.818744 | 1.670658e-52 | -8.615850e-47 |
| Msa0893800 | Msa1315590 | 0.806439 | 8.221135e-50 | -8.615850e-47 |
| Msa0893800 | Msa1324500 | 0.800543 | 1.372018e-48 | -8.615850e-47 |
| Msa0893800 | Msa1327050 | 0.801962 | 7.028699e-49 | -8.615850e-47 |
| Msa0893800 | Msa1328710 | 0.818222 | 2.194378e-52 | -8.615850e-47 |
| Msa0893800 | Msa1346370 | 0.828428 | 9.042378e-55 | -8.615850e-47 |
| Msa0893800 | Msa1353470 | 0.854028 | 1.616538e-61 | -8.615850e-47 |
| Msa0893800 | Msa1353980 | 0.851443 | 8.844674e-61 | -8.615850e-47 |
| Msa0893800 | Msa1357890 | 0.811140 | 8.126676e-51 | -8.615850e-47 |
| Msa0893800 | Msa1360440 | 0.823730 | 1.183295e-53 | -8.615850e-47 |
| Msa0893800 | Msa1366600 | 0.800683 | 1.284431e-48 | -8.615850e-47 |
| Msa0893800 | Msa1367590 | 0.803022 | 4.251426e-49 | -8.615850e-47 |
| Msa0893800 | Msa1370070 | -0.814170 | 1.765885e-51 | -8.615850e-47 |
| Msa0893800 | Msa1372760 | 0.801236 | 9.904923e-49 | -8.615850e-47 |
| Msa0893800 | Msa1375560 | 0.801342 | 9.418903e-49 | -8.615850e-47 |
| Msa0893800 | Msa1375840 | 0.804647 | 1.953641e-49 | -8.615850e-47 |
| Msa0893800 | Msa1376200 | 0.800456 | 1.429174e-48 | -8.615850e-47 |
| Msa0893800 | Msa1377500 | 0.808726 | 2.687691e-50 | -8.615850e-47 |
| Msa0893800 | Msa1382400 | 0.830492 | 2.848011e-55 | -8.615850e-47 |
| Msa0893800 | Msa1382620 | 0.804768 | 1.843263e-49 | -8.615850e-47 |
| Msa0893800 | Msa1383230 | 0.801185 | 1.014410e-48 | -8.615850e-47 |
| Msa0893800 | Msa1385000 | 0.802303 | 5.980572e-49 | -8.615850e-47 |
| Msa0893800 | Msa1398090 | 0.823347 | 1.454322e-53 | -8.615850e-47 |
| Msa0893800 | Msa1398340 | 0.800020 | 1.753332e-48 | -8.615850e-47 |
| Msa0893800 | Msa1400870 | -0.808767 | 2.634383e-50 | -8.615850e-47 |
| Msa0893800 | Msa1409870 | 0.825859 | 3.724313e-54 | -8.615850e-47 |
| Msa0893800 | Msa1409880 | 0.835547 | 1.574475e-56 | -8.615850e-47 |
| Msa0893800 | Msa1412640 | 0.800873 | 1.174931e-48 | -8.615850e-47 |
| Msa0893800 | Msa1422580 | 0.825735 | 3.985743e-54 | -8.615850e-47 |
| Msa0893800 | Msa1423350 | 0.823414 | 1.403096e-53 | -8.615850e-47 |
| Msa0893800 | Msa1423870 | 0.814158 | 1.776187e-51 | -8.615850e-47 |
| Msa0893800 | Msa1433390 | 0.813090 | 3.052386e-51 | -8.615850e-47 |
| Msa0893800 | Msa1440560 | 0.801097 | 1.057581e-48 | -8.615850e-47 |
| Msa0893800 | Msa1449340 | -0.809969 | 1.454602e-50 | -8.615850e-47 |
| Msa0893800 | Msa1451160 | 0.826882 | 2.125147e-54 | -8.615850e-47 |
| Msa0893800 | Msa1460020 | 0.815571 | 8.634608e-52 | -8.615850e-47 |
| Msa0893800 | Msa1461300 | 0.821696 | 3.519199e-53 | -8.615850e-47 |
| Msa0893800 | Msa1463900 | 0.807955 | 3.924344e-50 | -8.615850e-47 |
| Msa0893800 | Msa1464810 | 0.822602 | 2.169543e-53 | -8.615850e-47 |
| Msa0893800 | Msa1466540 | 0.826914 | 2.088791e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893800 | MtrunA17_Chr6g0476721 | 95.385 | 130 | 6 | 0 | 1 | 130 | 1 | 130 | 6.66e-79 | 228 |
| Msa0893800 | MtrunA17_Chr5g0394191 | 82.828 | 99 | 17 | 0 | 32 | 130 | 1 | 99 | 1.59e-54 | 166 |
| Msa0893800 | MtrunA17_Chr6g0476661 | 55.556 | 90 | 40 | 0 | 36 | 125 | 6 | 95 | 5.54e-31 | 106 |
| Msa0893800 | MtrunA17_Chr1g0188281 | 53.191 | 94 | 44 | 0 | 32 | 125 | 36 | 129 | 6.70e-31 | 107 |
| Msa0893800 | MtrunA17_Chr7g0262501 | 47.674 | 86 | 45 | 0 | 40 | 125 | 7 | 92 | 7.29e-25 | 91.3 |
| Msa0893800 | MtrunA17_Chr1g0183081 | 45.349 | 86 | 47 | 0 | 40 | 125 | 11 | 96 | 3.71e-22 | 84.3 |
| Msa0893800 | MtrunA17_Chr1g0193951 | 32.258 | 93 | 63 | 0 | 36 | 128 | 45 | 137 | 2.14e-12 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893800 | AT4G10280.1 | 45.161 | 124 | 58 | 2 | 16 | 129 | 17 | 140 | 2.01e-31 | 109 |
| Msa0893800 | AT4G10300.1 | 51.613 | 93 | 45 | 0 | 36 | 128 | 42 | 134 | 4.42e-29 | 103 |
| Msa0893800 | AT4G10290.1 | 47.959 | 98 | 48 | 1 | 36 | 130 | 16 | 113 | 2.37e-24 | 90.5 |
| Msa0893800 | AT3G04300.1 | 47.674 | 86 | 45 | 0 | 42 | 127 | 5 | 90 | 3.92e-22 | 84.3 |
| Msa0893800 | AT4G28703.1 | 43.011 | 93 | 44 | 1 | 42 | 125 | 10 | 102 | 4.19e-20 | 79.3 |
| Msa0893800 | AT2G32180.1 | 35.484 | 93 | 60 | 0 | 36 | 128 | 42 | 134 | 5.26e-15 | 67.0 |
| Msa0893800 | AT2G32180.2 | 35.484 | 93 | 60 | 0 | 36 | 128 | 42 | 134 | 5.26e-15 | 67.0 |
| Msa0893800 | AT2G32650.2 | 35.484 | 93 | 60 | 0 | 36 | 128 | 42 | 134 | 5.37e-15 | 67.0 |
| Msa0893800 | AT2G32650.1 | 35.484 | 93 | 60 | 0 | 36 | 128 | 42 | 134 | 5.37e-15 | 67.0 |
Find 34 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATAGCAAAATTACTTATT+TGG | 0.146096 | 6_1:-78661443 | None:intergenic |
| ATGGCAACCTATGAAGTATT+TGG | 0.214287 | 6_1:+78659072 | Msa0893800:CDS |
| CTTTCACTTCCATTAGATTA+TGG | 0.244585 | 6_1:+78661531 | Msa0893800:three_prime_UTR |
| ATTTGGCCACAAGAGTAATA+AGG | 0.318432 | 6_1:-78661426 | None:intergenic |
| AACACCAAGCTCAACGAGTT+TGG | 0.318473 | 6_1:-78659124 | None:intergenic |
| ATGTAATGTTCATTCCTTTA+GGG | 0.320882 | 6_1:-78661351 | None:intergenic |
| CATGTAATGTTCATTCCTTT+AGG | 0.324667 | 6_1:-78661352 | None:intergenic |
| TAATGGAAGTGAAAGCTTAA+AGG | 0.325458 | 6_1:-78661523 | None:intergenic |
| CTTGACTCCAAATACTTCAT+AGG | 0.339404 | 6_1:-78659079 | None:intergenic |
| GTTACTGTTGAAAAGTCAAT+TGG | 0.386921 | 6_1:+78661292 | Msa0893800:CDS |
| AGTGATAAACGTTGCACAAT+GGG | 0.430031 | 6_1:-78658985 | None:intergenic |
| ATAATATATCCATAATCTAA+TGG | 0.433231 | 6_1:-78661540 | None:intergenic |
| GTTGCCATGGAAGTTTCCTT+TGG | 0.438908 | 6_1:-78659057 | None:intergenic |
| TTGAGCTTGGTGTTTCAACT+TGG | 0.460625 | 6_1:+78659133 | Msa0893800:CDS |
| CTAAAGGAATGAACATTACA+TGG | 0.471661 | 6_1:+78661353 | Msa0893800:CDS |
| GAAACAATGTATATACTTGA+AGG | 0.472797 | 6_1:+78661259 | Msa0893800:CDS |
| AAACTATAGTGCTTCTTCAC+AGG | 0.477631 | 6_1:-78661388 | None:intergenic |
| AATGGCTATATAATTGATGT+TGG | 0.481807 | 6_1:+78661494 | Msa0893800:three_prime_UTR |
| GTTTCTGTTTCTCATGCCAA+AGG | 0.514344 | 6_1:+78659041 | Msa0893800:CDS |
| CAATCCAAACTCGTTGAGCT+TGG | 0.530445 | 6_1:+78659120 | Msa0893800:CDS |
| ATGAAGCCTTATTACTCTTG+TGG | 0.543000 | 6_1:+78661420 | Msa0893800:exon |
| ATGGCTATATAATTGATGTT+GGG | 0.548517 | 6_1:+78661495 | Msa0893800:three_prime_UTR |
| CATGAGAAACAGAAACAAGA+TGG | 0.552975 | 6_1:-78659034 | None:intergenic |
| AGATTATGGATATATTATGC+TGG | 0.554064 | 6_1:+78661545 | Msa0893800:three_prime_UTR |
| CATGCCAAAGGAAACTTCCA+TGG | 0.559831 | 6_1:+78659053 | Msa0893800:CDS |
| AACAAGATGGAGAGAATGAG+AGG | 0.564011 | 6_1:-78659021 | None:intergenic |
| AAATACTTCATAGGTTGCCA+TGG | 0.568213 | 6_1:-78659070 | None:intergenic |
| TCTTCTTCTTCAAATGACCA+TGG | 0.569053 | 6_1:-78661238 | None:intergenic |
| TGAACATTCAACAGGTGGGA+AGG | 0.571776 | 6_1:+78661199 | Msa0893800:intron |
| TCAACGAGTTTGGATTGTGA+TGG | 0.575023 | 6_1:-78659114 | None:intergenic |
| ACATTCAACAGGTGGGAAGG+TGG | 0.637553 | 6_1:+78661202 | Msa0893800:intron |
| TAAAGGAATGAACATTACAT+GGG | 0.639073 | 6_1:+78661354 | Msa0893800:CDS |
| GAAGTGATTATCACACACAA+TGG | 0.656940 | 6_1:+78661476 | Msa0893800:three_prime_UTR |
| GAGTGATAAACGTTGCACAA+TGG | 0.667436 | 6_1:-78658986 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATGTAAAAATTAAAAC+CGG | - | chr6_1:78659846-78659865 | None:intergenic | 10.0% |
| !!! | TTTTTTGTATGATCAATTAT+GGG | + | chr6_1:78659261-78659280 | Msa0893800:intron | 15.0% |
| !! | ACAGAAAAAAAAAAAAAACT+TGG | - | chr6_1:78659627-78659646 | None:intergenic | 15.0% |
| !!! | TTTCTTTGATTTCATTATTT+TGG | - | chr6_1:78660519-78660538 | None:intergenic | 15.0% |
| !! | TATAATGAAATATGAAAAGA+TGG | - | chr6_1:78661149-78661168 | None:intergenic | 15.0% |
| !! | ATAATATATCCATAATCTAA+TGG | - | chr6_1:78661543-78661562 | None:intergenic | 15.0% |
| !! | GAAAAACACAAACAATAATT+TGG | + | chr6_1:78658949-78658968 | Msa0893800:five_prime_UTR | 20.0% |
| !!! | CTTTTTTGTATGATCAATTA+TGG | + | chr6_1:78659260-78659279 | Msa0893800:intron | 20.0% |
| !!! | TCTTTTGCATAACAAATTTT+GGG | + | chr6_1:78659424-78659443 | Msa0893800:intron | 20.0% |
| !! | ATCATAAAATTTCAAATAGC+AGG | - | chr6_1:78660086-78660105 | None:intergenic | 20.0% |
| !!! | ACTTTTTTATCATCATCTAA+TGG | + | chr6_1:78660320-78660339 | Msa0893800:intron | 20.0% |
| !! | ACATAGCAAAATTACTTATT+TGG | - | chr6_1:78661446-78661465 | None:intergenic | 20.0% |
| !!! | GGTATTTCATTTTAATTATC+TGG | + | chr6_1:78661566-78661585 | Msa0893800:three_prime_UTR | 20.0% |
| !!! | ATTTCATTTTAATTATCTGG+TGG | + | chr6_1:78661569-78661588 | Msa0893800:three_prime_UTR | 20.0% |
| !!! | ACATATTTAATCCCTTTTTT+TGG | - | chr6_1:78661622-78661641 | None:intergenic | 20.0% |
| !!! | CTTTAAAACAAACACATCAA+TGG | - | chr6_1:78659233-78659252 | None:intergenic | 25.0% |
| !!! | TTTTACACTCATATTTGTTG+TGG | + | chr6_1:78659301-78659320 | Msa0893800:intron | 25.0% |
| !!! | TTTACACTCATATTTGTTGT+GGG | + | chr6_1:78659302-78659321 | Msa0893800:intron | 25.0% |
| !! | CTCTTTTGCATAACAAATTT+TGG | + | chr6_1:78659423-78659442 | Msa0893800:intron | 25.0% |
| !! | TTTCATACTCATATTTGTTG+TGG | + | chr6_1:78659464-78659483 | Msa0893800:intron | 25.0% |
| !!! | TTCATACTCATATTTGTTGT+GGG | + | chr6_1:78659465-78659484 | Msa0893800:intron | 25.0% |
| !!! | AATAGCATGTTTTTGTTTTC+TGG | + | chr6_1:78659494-78659513 | Msa0893800:intron | 25.0% |
| !!! | ATAGCATGTTTTTGTTTTCT+GGG | + | chr6_1:78659495-78659514 | Msa0893800:intron | 25.0% |
| !!! | ATTTTAGGTTCTTTGGAATT+GGG | + | chr6_1:78659574-78659593 | Msa0893800:intron | 25.0% |
| !!! | GGTTTGTTTTGTAATTTAGA+TGG | + | chr6_1:78659598-78659617 | Msa0893800:intron | 25.0% |
| !! | TTTTCTGTTTAACCTTTCTA+AGG | + | chr6_1:78659639-78659658 | Msa0893800:intron | 25.0% |
| ! | TGATAAAAAAAGGAGAAAAG+GGG | - | chr6_1:78660185-78660204 | None:intergenic | 25.0% |
| ! | GTGATAAAAAAAGGAGAAAA+GGG | - | chr6_1:78660186-78660205 | None:intergenic | 25.0% |
| !! | GAAAATTGTCTTTTCATAGA+GGG | - | chr6_1:78660698-78660717 | None:intergenic | 25.0% |
| !! | AGAAAATTGTCTTTTCATAG+AGG | - | chr6_1:78660699-78660718 | None:intergenic | 25.0% |
| ! | TCATTTATTCTCTTCTGTTA+TGG | + | chr6_1:78660740-78660759 | Msa0893800:intron | 25.0% |
| ! | CATTTATTCTCTTCTGTTAT+GGG | + | chr6_1:78660741-78660760 | Msa0893800:intron | 25.0% |
| ! | CATGCTAAATAACCATAAAT+AGG | + | chr6_1:78660990-78661009 | Msa0893800:intron | 25.0% |
| ! | AATAACCATAAATAGGTTTG+AGG | + | chr6_1:78660997-78661016 | Msa0893800:intron | 25.0% |
| !! | AATGACCATGGAATTTTTAA+TGG | - | chr6_1:78661229-78661248 | None:intergenic | 25.0% |
| ! | GAAACAATGTATATACTTGA+AGG | + | chr6_1:78661259-78661278 | Msa0893800:CDS | 25.0% |
| !!! | TCAATTGGATCTTTTGAAAT+TGG | + | chr6_1:78661307-78661326 | Msa0893800:CDS | 25.0% |
| !!! | AATTTAGTTGTTTTCCCTAA+AGG | + | chr6_1:78661337-78661356 | Msa0893800:CDS | 25.0% |
| ! | ATGTAATGTTCATTCCTTTA+GGG | - | chr6_1:78661354-78661373 | None:intergenic | 25.0% |
| ! | TAAAGGAATGAACATTACAT+GGG | + | chr6_1:78661354-78661373 | Msa0893800:CDS | 25.0% |
| ! | AATGGCTATATAATTGATGT+TGG | + | chr6_1:78661494-78661513 | Msa0893800:three_prime_UTR | 25.0% |
| ! | ATGGCTATATAATTGATGTT+GGG | + | chr6_1:78661495-78661514 | Msa0893800:three_prime_UTR | 25.0% |
| ! | AGATTATGGATATATTATGC+TGG | + | chr6_1:78661545-78661564 | Msa0893800:three_prime_UTR | 25.0% |
| ! | TATCATTTGATGCCAAAAAA+AGG | + | chr6_1:78661607-78661626 | Msa0893800:three_prime_UTR | 25.0% |
| ! | ATCATTTGATGCCAAAAAAA+GGG | + | chr6_1:78661608-78661627 | Msa0893800:three_prime_UTR | 25.0% |
| GAAGAGAAAGAAAGTTACTT+AGG | - | chr6_1:78659159-78659178 | None:intergenic | 30.0% | |
| !! | TTACACTCATATTTGTTGTG+GGG | + | chr6_1:78659303-78659322 | Msa0893800:intron | 30.0% |
| !! | TCATACTCATATTTGTTGTG+GGG | + | chr6_1:78659466-78659485 | Msa0893800:intron | 30.0% |
| !!! | TAGCATGTTTTTGTTTTCTG+GGG | + | chr6_1:78659496-78659515 | Msa0893800:intron | 30.0% |
| ! | GCTATTAAACCCTACATTTT+AGG | + | chr6_1:78659559-78659578 | Msa0893800:intron | 30.0% |
| TCCAAAGAACCTAAAATGTA+GGG | - | chr6_1:78659571-78659590 | None:intergenic | 30.0% | |
| TTCCAAAGAACCTAAAATGT+AGG | - | chr6_1:78659572-78659591 | None:intergenic | 30.0% | |
| !!! | CATTTTAGGTTCTTTGGAAT+TGG | + | chr6_1:78659573-78659592 | Msa0893800:intron | 30.0% |
| !! | GCAAAATTAGATCGTTTTTC+CGG | - | chr6_1:78659708-78659727 | None:intergenic | 30.0% |
| TCATCTAATTGAATCGAATC+AGG | + | chr6_1:78659892-78659911 | Msa0893800:intron | 30.0% | |
| CATCTAATTGAATCGAATCA+GGG | + | chr6_1:78659893-78659912 | Msa0893800:intron | 30.0% | |
| GGTGATAAAAAAAGGAGAAA+AGG | - | chr6_1:78660187-78660206 | None:intergenic | 30.0% | |
| TTTATCATCATCTAATGGCT+AGG | + | chr6_1:78660325-78660344 | Msa0893800:intron | 30.0% | |
| GCAGTATACTACTGAATTAA+AGG | + | chr6_1:78660413-78660432 | Msa0893800:intron | 30.0% | |
| !! | TATTTTGGAAATCTCTCTCA+GGG | - | chr6_1:78660504-78660523 | None:intergenic | 30.0% |
| !!! | TTATTTTGGAAATCTCTCTC+AGG | - | chr6_1:78660505-78660524 | None:intergenic | 30.0% |
| TTATGGGCAAATTGAAGTTA+TGG | + | chr6_1:78660757-78660776 | Msa0893800:intron | 30.0% | |
| TTGATTGATATGCTTGATAG+TGG | + | chr6_1:78660803-78660822 | Msa0893800:intron | 30.0% | |
| ! | TGCATCTAGTTTAGAGAATT+TGG | + | chr6_1:78660931-78660950 | Msa0893800:intron | 30.0% |
| ! | ATCTAGTTTAGAGAATTTGG+TGG | + | chr6_1:78660934-78660953 | Msa0893800:intron | 30.0% |
| ! | TCTAGTTTAGAGAATTTGGT+GGG | + | chr6_1:78660935-78660954 | Msa0893800:intron | 30.0% |
| AATCTGTTTGAACATTCAAC+AGG | + | chr6_1:78661191-78661210 | Msa0893800:intron | 30.0% | |
| GTTACTGTTGAAAAGTCAAT+TGG | + | chr6_1:78661292-78661311 | Msa0893800:CDS | 30.0% | |
| !!! | ATTGGATCTTTTGAAATTGG+AGG | + | chr6_1:78661310-78661329 | Msa0893800:CDS | 30.0% |
| CATGTAATGTTCATTCCTTT+AGG | - | chr6_1:78661355-78661374 | None:intergenic | 30.0% | |
| CTAAAGGAATGAACATTACA+TGG | + | chr6_1:78661353-78661372 | Msa0893800:CDS | 30.0% | |
| TAATGGAAGTGAAAGCTTAA+AGG | - | chr6_1:78661526-78661545 | None:intergenic | 30.0% | |
| CTTTCACTTCCATTAGATTA+TGG | + | chr6_1:78661531-78661550 | Msa0893800:three_prime_UTR | 30.0% | |
| AGTGATAAACGTTGCACAAT+GGG | - | chr6_1:78658988-78659007 | None:intergenic | 35.0% | |
| CATGAGAAACAGAAACAAGA+TGG | - | chr6_1:78659037-78659056 | None:intergenic | 35.0% | |
| AAATACTTCATAGGTTGCCA+TGG | - | chr6_1:78659073-78659092 | None:intergenic | 35.0% | |
| ! | ATGGCAACCTATGAAGTATT+TGG | + | chr6_1:78659072-78659091 | Msa0893800:CDS | 35.0% |
| CTTGACTCCAAATACTTCAT+AGG | - | chr6_1:78659082-78659101 | None:intergenic | 35.0% | |
| !! | TACACTCATATTTGTTGTGG+GGG | + | chr6_1:78659304-78659323 | Msa0893800:intron | 35.0% |
| !! | CATACTCATATTTGTTGTGG+GGG | + | chr6_1:78659467-78659486 | Msa0893800:intron | 35.0% |
| !!! | AGCATGTTTTTGTTTTCTGG+GGG | + | chr6_1:78659497-78659516 | Msa0893800:intron | 35.0% |
| ACTGTTTAGTTGTGTTGTGT+TGG | + | chr6_1:78659534-78659553 | Msa0893800:intron | 35.0% | |
| !!! | ACCCTACATTTTAGGTTCTT+TGG | + | chr6_1:78659567-78659586 | Msa0893800:intron | 35.0% |
| CAAACACAGAATCCTTAGAA+AGG | - | chr6_1:78659654-78659673 | None:intergenic | 35.0% | |
| TACTTCACAGCTGATTACTA+AGG | - | chr6_1:78659680-78659699 | None:intergenic | 35.0% | |
| GAATCAATTGAACCATAACC+TGG | + | chr6_1:78659918-78659937 | Msa0893800:intron | 35.0% | |
| AATTCAGTAGTATACTGCCA+TGG | - | chr6_1:78660411-78660430 | None:intergenic | 35.0% | |
| TTAGTACCAAAGTTAGGAGA+AGG | - | chr6_1:78660458-78660477 | None:intergenic | 35.0% | |
| TGTAGCTTAGTACCAAAGTT+AGG | - | chr6_1:78660464-78660483 | None:intergenic | 35.0% | |
| ! | AATCTCTCTCAGGGTATTAA+GGG | - | chr6_1:78660495-78660514 | None:intergenic | 35.0% |
| ! | AAATCTCTCTCAGGGTATTA+AGG | - | chr6_1:78660496-78660515 | None:intergenic | 35.0% |
| CAATTTGAATCTCCAATCCA+TGG | - | chr6_1:78660564-78660583 | None:intergenic | 35.0% | |
| ! | TCTAACTCCAGAGTATTATG+AGG | + | chr6_1:78660889-78660908 | Msa0893800:intron | 35.0% |
| ! | CTAACTCCAGAGTATTATGA+GGG | + | chr6_1:78660890-78660909 | Msa0893800:intron | 35.0% |
| ! | TAACTCCAGAGTATTATGAG+GGG | + | chr6_1:78660891-78660910 | Msa0893800:intron | 35.0% |
| TCTCTAAACTAGATGCAGTA+GGG | - | chr6_1:78660928-78660947 | None:intergenic | 35.0% | |
| TTCTCTAAACTAGATGCAGT+AGG | - | chr6_1:78660929-78660948 | None:intergenic | 35.0% | |
| ! | TTTCATCTCATTTTCACCGT+CGG | + | chr6_1:78661041-78661060 | Msa0893800:intron | 35.0% |
| GTTTAACAACTATACACCGA+CGG | - | chr6_1:78661060-78661079 | None:intergenic | 35.0% | |
| TGTTTGAACATTCAACAGGT+GGG | + | chr6_1:78661195-78661214 | Msa0893800:intron | 35.0% | |
| GTGGTCCATTAAAAATTCCA+TGG | + | chr6_1:78661221-78661240 | Msa0893800:CDS | 35.0% | |
| TCTTCTTCTTCAAATGACCA+TGG | - | chr6_1:78661241-78661260 | None:intergenic | 35.0% | |
| AAACTATAGTGCTTCTTCAC+AGG | - | chr6_1:78661391-78661410 | None:intergenic | 35.0% | |
| !! | ATGAAGCCTTATTACTCTTG+TGG | + | chr6_1:78661420-78661439 | Msa0893800:exon | 35.0% |
| ATTTGGCCACAAGAGTAATA+AGG | - | chr6_1:78661429-78661448 | None:intergenic | 35.0% | |
| GAAGTGATTATCACACACAA+TGG | + | chr6_1:78661476-78661495 | Msa0893800:three_prime_UTR | 35.0% | |
| GAGTGATAAACGTTGCACAA+TGG | - | chr6_1:78658989-78659008 | None:intergenic | 40.0% | |
| AACAAGATGGAGAGAATGAG+AGG | - | chr6_1:78659024-78659043 | None:intergenic | 40.0% | |
| ! | GTTTCTGTTTCTCATGCCAA+AGG | + | chr6_1:78659041-78659060 | Msa0893800:CDS | 40.0% |
| TCAACGAGTTTGGATTGTGA+TGG | - | chr6_1:78659117-78659136 | None:intergenic | 40.0% | |
| !! | TTGAGCTTGGTGTTTCAACT+TGG | + | chr6_1:78659133-78659152 | Msa0893800:CDS | 40.0% |
| !! | TTAGGTTCTTTGGAATTGGG+AGG | + | chr6_1:78659577-78659596 | Msa0893800:intron | 40.0% |
| TCAGCTGTGAAGTATGAAAC+CGG | + | chr6_1:78659686-78659705 | Msa0893800:intron | 40.0% | |
| CAGACCAATGTTTCGAAAAC+CGG | + | chr6_1:78659733-78659752 | Msa0893800:intron | 40.0% | |
| ! | ACCAACCTGATTGGTTCAAA+CGG | + | chr6_1:78659756-78659775 | Msa0893800:intron | 40.0% |
| TTCAACCGTTTGAACCAATC+AGG | - | chr6_1:78659764-78659783 | None:intergenic | 40.0% | |
| !! | TGTGGCAGTTGGTTTGATAT+TGG | + | chr6_1:78659799-78659818 | Msa0893800:intron | 40.0% |
| !! | GTGGCAGTTGGTTTGATATT+GGG | + | chr6_1:78659800-78659819 | Msa0893800:intron | 40.0% |
| ATATTGGGTACATTGCAGTC+TGG | + | chr6_1:78659815-78659834 | Msa0893800:intron | 40.0% | |
| TCAATTGAACCATAACCTGG+AGG | + | chr6_1:78659921-78659940 | Msa0893800:intron | 40.0% | |
| GGTCTCAATGGTTCAATCTT+CGG | + | chr6_1:78659942-78659961 | Msa0893800:intron | 40.0% | |
| TTCGGGTCGGTGATAAAAAA+AGG | - | chr6_1:78660195-78660214 | None:intergenic | 40.0% | |
| CTAATGGCTAGGATTCACAA+TGG | + | chr6_1:78660336-78660355 | Msa0893800:intron | 40.0% | |
| GATTTAGATTCTCCGCAATC+AGG | - | chr6_1:78660362-78660381 | None:intergenic | 40.0% | |
| GTTAGGAGAAGGATAGTGAA+AGG | - | chr6_1:78660447-78660466 | None:intergenic | 40.0% | |
| CACTATCCTTCTCCTAACTT+TGG | + | chr6_1:78660449-78660468 | Msa0893800:intron | 40.0% | |
| TGGATGTGCAATCCATATCA+AGG | + | chr6_1:78660823-78660842 | Msa0893800:intron | 40.0% | |
| !! | TACTCTGGAGTTCCTTGATA+TGG | - | chr6_1:78660838-78660857 | None:intergenic | 40.0% |
| ! | AGGAACTCCAGAGTATTATG+AGG | + | chr6_1:78660843-78660862 | Msa0893800:intron | 40.0% |
| ! | GGAACTCCAGAGTATTATGA+GGG | + | chr6_1:78660844-78660863 | Msa0893800:intron | 40.0% |
| ! | GAACTCCAGAGTATTATGAG+GGG | + | chr6_1:78660845-78660864 | Msa0893800:intron | 40.0% |
| TGAATCCCCTCATAATACTC+TGG | - | chr6_1:78660853-78660872 | None:intergenic | 40.0% | |
| GAGTATTATGAGGGGATTCA+CGG | + | chr6_1:78660853-78660872 | Msa0893800:intron | 40.0% | |
| TGAATCCCCTCATAATACTC+TGG | - | chr6_1:78660853-78660872 | None:intergenic | 40.0% | |
| GAGTATTATGAGGGGATTCA+CGG | + | chr6_1:78660853-78660872 | Msa0893800:intron | 40.0% | |
| GTCAGCCTCAAACCTATTTA+TGG | - | chr6_1:78661005-78661024 | None:intergenic | 40.0% | |
| CTGTTTGAACATTCAACAGG+TGG | + | chr6_1:78661194-78661213 | Msa0893800:intron | 40.0% | |
| !!! | GGATCTTTTGAAATTGGAGG+TGG | + | chr6_1:78661313-78661332 | Msa0893800:CDS | 40.0% |
| CATGCCAAAGGAAACTTCCA+TGG | + | chr6_1:78659053-78659072 | Msa0893800:CDS | 45.0% | |
| GTTGCCATGGAAGTTTCCTT+TGG | - | chr6_1:78659060-78659079 | None:intergenic | 45.0% | |
| CAATCCAAACTCGTTGAGCT+TGG | + | chr6_1:78659120-78659139 | Msa0893800:CDS | 45.0% | |
| AACACCAAGCTCAACGAGTT+TGG | - | chr6_1:78659127-78659146 | None:intergenic | 45.0% | |
| !! | ACTCATATTTGTTGTGGGGG+TGG | + | chr6_1:78659307-78659326 | Msa0893800:intron | 45.0% |
| !! | ACTCATATTTGTTGTGGGGG+TGG | + | chr6_1:78659307-78659326 | Msa0893800:intron | 45.0% |
| !!! | TTTTCTGGGGGTGTTTGTGA+GGG | + | chr6_1:78659509-78659528 | Msa0893800:intron | 45.0% |
| ! | TGGTCCGGTTTTCGAAACAT+TGG | - | chr6_1:78659740-78659759 | None:intergenic | 45.0% |
| !! | TTGAACCAATCAGGTTGGTC+CGG | - | chr6_1:78659755-78659774 | None:intergenic | 45.0% |
| ACCGTTTGAACCAATCAGGT+TGG | - | chr6_1:78659760-78659779 | None:intergenic | 45.0% | |
| TTGGTTCAAACGGTTGAACC+AGG | + | chr6_1:78659766-78659785 | Msa0893800:intron | 45.0% | |
| CAAACGGTTGAACCAGGAAT+TGG | + | chr6_1:78659772-78659791 | Msa0893800:intron | 45.0% | |
| ! | ACATTGCAGTCTGGTTCAAC+CGG | + | chr6_1:78659824-78659843 | Msa0893800:intron | 45.0% |
| ATTGAACCATTGAGACCTCC+AGG | - | chr6_1:78659939-78659958 | None:intergenic | 45.0% | |
| CAATGGTTCAATCTTCGGTC+TGG | + | chr6_1:78659947-78659966 | Msa0893800:intron | 45.0% | |
| AGATGCTCAGTGATGCAATG+TGG | + | chr6_1:78660130-78660149 | Msa0893800:intron | 45.0% | |
| GATTCACAATGGCCTGATTG+CGG | + | chr6_1:78660347-78660366 | Msa0893800:intron | 45.0% | |
| ! | CCATGGAGAGACACTCTTTT+TGG | - | chr6_1:78660547-78660566 | None:intergenic | 45.0% |
| !! | CCAAAAAGAGTGTCTCTCCA+TGG | + | chr6_1:78660544-78660563 | Msa0893800:intron | 45.0% |
| !! | AAGAGTGTCTCTCCATGGAT+TGG | + | chr6_1:78660549-78660568 | Msa0893800:intron | 45.0% |
| !! | CTCTGGAGTTAGATGCAGTA+GGG | - | chr6_1:78660882-78660901 | None:intergenic | 45.0% |
| !! | ACTCTGGAGTTAGATGCAGT+AGG | - | chr6_1:78660883-78660902 | None:intergenic | 45.0% |
| GTGCAAGCGCGTATTACTTT+AGG | - | chr6_1:78660971-78660990 | None:intergenic | 45.0% | |
| TGAACATTCAACAGGTGGGA+AGG | + | chr6_1:78661199-78661218 | Msa0893800:intron | 45.0% | |
| !!! | GTTTTCTGGGGGTGTTTGTG+AGG | + | chr6_1:78659508-78659527 | Msa0893800:intron | 50.0% |
| !! | TTTCTGGGGGTGTTTGTGAG+GGG | + | chr6_1:78659510-78659529 | Msa0893800:intron | 50.0% |
| GAAAACCGGACCAACCTGAT+TGG | + | chr6_1:78659747-78659766 | Msa0893800:intron | 50.0% | |
| GAACCAGGAATTGGTCAGTG+TGG | + | chr6_1:78659781-78659800 | Msa0893800:intron | 50.0% | |
| GAATTGGTCAGTGTGGCAGT+TGG | + | chr6_1:78659788-78659807 | Msa0893800:intron | 50.0% | |
| CCATTGAGACCTCCAGGTTA+TGG | - | chr6_1:78659933-78659952 | None:intergenic | 50.0% | |
| CCATAACCTGGAGGTCTCAA+TGG | + | chr6_1:78659930-78659949 | Msa0893800:intron | 50.0% | |
| TTGCGTGACTGCAGGGAATT+CGG | - | chr6_1:78660213-78660232 | None:intergenic | 50.0% | |
| CTCTTGATTGCGTGACTGCA+GGG | - | chr6_1:78660220-78660239 | None:intergenic | 50.0% | |
| TCTCTTGATTGCGTGACTGC+AGG | - | chr6_1:78660221-78660240 | None:intergenic | 50.0% | |
| ACAGCTCACAAGTGAAGCCA+TGG | + | chr6_1:78660391-78660410 | Msa0893800:intron | 50.0% | |
| ACATTCAACAGGTGGGAAGG+TGG | + | chr6_1:78661202-78661221 | Msa0893800:intron | 50.0% | |
| CTGCCACACTGACCAATTCC+TGG | - | chr6_1:78659787-78659806 | None:intergenic | 55.0% | |
| TGACTGCAGGGAATTCGGGT+CGG | - | chr6_1:78660208-78660227 | None:intergenic | 55.0% | |
| TGCGTGACTGCAGGGAATTC+GGG | - | chr6_1:78660212-78660231 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 78658945 | 78661651 | 78658945 | ID=Msa0893800;Name=Msa0893800 |
| chr6_1 | mRNA | 78658945 | 78661651 | 78658945 | ID=Msa0893800-mRNA-1;Parent=Msa0893800;Name=Msa0893800-mRNA-1;_AED=0.03;_eAED=0.03;_QI=34|1|1|1|1|1|2|228|130 |
| chr6_1 | exon | 78658945 | 78659160 | 78658945 | ID=Msa0893800-mRNA-1:exon:13111;Parent=Msa0893800-mRNA-1 |
| chr6_1 | exon | 78661213 | 78661651 | 78661213 | ID=Msa0893800-mRNA-1:exon:13112;Parent=Msa0893800-mRNA-1 |
| chr6_1 | five_prime_UTR | 78658945 | 78658978 | 78658945 | ID=Msa0893800-mRNA-1:five_prime_utr;Parent=Msa0893800-mRNA-1 |
| chr6_1 | CDS | 78658979 | 78659160 | 78658979 | ID=Msa0893800-mRNA-1:cds;Parent=Msa0893800-mRNA-1 |
| chr6_1 | CDS | 78661213 | 78661423 | 78661213 | ID=Msa0893800-mRNA-1:cds;Parent=Msa0893800-mRNA-1 |
| chr6_1 | three_prime_UTR | 78661424 | 78661651 | 78661424 | ID=Msa0893800-mRNA-1:three_prime_utr;Parent=Msa0893800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
