AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0603490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0603490 MtrunA17_Chr4g0031901 97.274 587 14 1 1 587 1 585 0.0 1168
Msa0603490 MtrunA17_Chr7g0238351 73.368 582 143 6 14 587 4 581 0.0 889
Msa0603490 MtrunA17_Chr7g0237491 72.184 586 148 6 11 587 1 580 0.0 872
Msa0603490 MtrunA17_Chr7g0237441 70.408 588 159 5 7 587 1 580 0.0 867
Msa0603490 MtrunA17_Chr7g0238941 70.660 576 156 5 16 587 12 578 0.0 864
Msa0603490 MtrunA17_Chr7g0238981 67.145 557 174 4 37 587 40 593 0.0 786
Msa0603490 MtrunA17_Chr5g0429511 55.009 549 231 7 41 587 24 558 0.0 626
Msa0603490 MtrunA17_Chr3g0104061 54.745 548 233 5 41 587 23 556 0.0 625
Msa0603490 MtrunA17_Chr4g0005921 55.046 545 233 5 44 587 24 557 0.0 623
Msa0603490 MtrunA17_Chr5g0404341 53.552 549 240 6 41 587 31 566 0.0 620
Msa0603490 MtrunA17_Chr5g0404361 51.910 576 259 8 14 587 52 611 0.0 614
Msa0603490 MtrunA17_Chr5g0436461 51.404 570 256 6 19 587 5 554 0.0 598
Msa0603490 MtrunA17_Chr5g0437681 51.127 577 261 10 20 587 3 567 0.0 591
Msa0603490 MtrunA17_Chr3g0114211 50.862 580 251 11 20 587 13 570 0.0 582
Msa0603490 MtrunA17_Chr5g0431581 49.828 582 262 12 13 587 2 560 0.0 547
Msa0603490 MtrunA17_Chr8g0346581 47.170 583 277 11 21 587 4 571 1.78e-180 521
Msa0603490 MtrunA17_Chr2g0278811 43.576 576 287 6 44 587 38 607 2.62e-174 507
Msa0603490 MtrunA17_Chr7g0240991 44.797 567 296 8 31 587 12 571 6.73e-174 504
Msa0603490 MtrunA17_Chr7g0240971 47.222 576 280 11 25 587 6 570 3.46e-170 495
Msa0603490 MtrunA17_Chr4g0008521 45.324 556 281 7 45 587 27 572 3.20e-168 490
Msa0603490 MtrunA17_Chr3g0133861 41.888 339 182 9 245 577 1 330 1.53e-75 243
Msa0603490 MtrunA17_Chr3g0133871 48.165 218 112 1 13 230 2 218 5.12e-67 217
Msa0603490 MtrunA17_Chr8g0382691 30.619 565 328 18 44 577 34 565 3.35e-65 223
Msa0603490 MtrunA17_Chr3g0118321 31.218 583 314 21 45 587 27 562 5.68e-63 217
Msa0603490 MtrunA17_Chr3g0118331 31.250 576 313 24 44 577 25 559 5.70e-61 212
Msa0603490 MtrunA17_Chr5g0436431 46.341 205 101 3 342 545 32 228 5.80e-58 194
Msa0603490 MtrunA17_Chr4g0056511 27.381 588 363 15 19 587 7 549 2.62e-48 177
Msa0603490 MtrunA17_Chr3g0079321 26.401 553 348 14 19 552 4 516 6.13e-46 171
Msa0603490 MtrunA17_Chr7g0234061 26.128 532 322 18 45 552 30 514 2.43e-35 140
Msa0603490 MtrunA17_Chr1g0157341 24.908 546 366 14 44 587 29 532 2.52e-35 140
Msa0603490 MtrunA17_Chr3g0143671 23.498 566 349 14 44 587 30 533 1.37e-32 132
Msa0603490 MtrunA17_Chr4g0024861 24.855 519 320 14 44 547 27 490 1.71e-31 128
Msa0603490 MtrunA17_Chr4g0038671 23.878 557 357 15 44 587 30 532 1.94e-30 125
Msa0603490 MtrunA17_Chr2g0322441 24.478 527 312 14 44 547 30 493 8.43e-29 120
Msa0603490 MtrunA17_Chr3g0121171 24.955 561 359 17 45 582 27 548 2.30e-28 121
Msa0603490 MtrunA17_Chr3g0121171 24.468 564 358 20 45 582 1177 1698 3.71e-28 120
Msa0603490 MtrunA17_Chr3g0121171 24.605 569 351 19 45 582 602 1123 2.69e-27 118
Msa0603490 MtrunA17_Chr3g0121171 24.414 512 313 18 100 582 1798 2264 3.43e-22 102
Msa0603490 MtrunA17_Chr5g0402831 25.641 507 327 15 44 547 31 490 2.35e-28 119
Msa0603490 MtrunA17_Chr3g0118351 31.534 352 187 14 255 577 5 331 4.51e-28 115
Msa0603490 MtrunA17_Chr8g0374261 24.376 521 346 16 33 547 13 491 4.58e-28 118
Msa0603490 MtrunA17_Chr3g0121151 24.144 555 364 16 45 587 67 576 6.05e-28 118
Msa0603490 MtrunA17_Chr3g0121161 24.237 557 361 17 45 587 67 576 7.32e-28 118
Msa0603490 MtrunA17_Chr4g0043261 24.717 530 340 16 45 563 26 507 4.08e-27 115
Msa0603490 MtrunA17_Chr8g0374271 24.085 519 323 16 44 547 31 493 5.88e-27 115
Msa0603490 MtrunA17_Chr4g0075071 24.706 510 332 16 44 547 31 494 4.73e-25 109
Msa0603490 MtrunA17_Chr4g0043251 25.000 532 356 17 19 547 6 497 1.18e-23 105
Msa0603490 MtrunA17_Chr3g0118341 32.961 179 109 7 40 212 22 195 1.96e-22 95.9
Msa0603490 MtrunA17_Chr1g0197301 27.224 371 215 14 230 587 1 329 6.76e-20 91.3
Msa0603490 MtrunA17_Chr4g0024641 23.830 470 283 18 96 547 1 413 8.24e-17 84.3
Msa0603490 MtrunA17_Chr5g0436411 44.444 81 39 1 19 99 5 79 1.09e-15 72.4
Msa0603490 MtrunA17_Chr3g0118931 39.080 87 46 2 497 578 10 94 3.81e-12 63.2
Msa0603490 MtrunA17_Chr1g0197311 27.619 210 115 6 58 234 38 243 2.90e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0603490 AT2G29130.1 70.312 576 157 6 15 587 9 573 0.0 860
Msa0603490 AT5G60020.1 69.430 579 156 6 20 587 9 577 0.0 850
Msa0603490 AT5G60020.3 71.664 547 142 5 52 587 1 545 0.0 832
Msa0603490 AT5G60020.2 69.088 537 145 6 20 545 9 535 0.0 777
Msa0603490 AT2G38080.1 54.306 569 242 6 19 587 8 558 0.0 634
Msa0603490 AT5G58910.2 52.205 567 251 8 25 587 17 567 0.0 609
Msa0603490 AT5G03260.1 52.182 573 252 9 18 587 4 557 0.0 609
Msa0603490 AT5G58910.3 52.205 567 250 9 25 587 17 566 0.0 605
Msa0603490 AT2G40370.1 51.178 594 257 11 11 587 3 580 0.0 592
Msa0603490 AT5G05390.1 53.276 580 242 11 16 587 7 565 0.0 591
Msa0603490 AT5G01190.1 52.174 575 255 8 15 587 2 558 0.0 589
Msa0603490 AT1G18140.1 50.622 563 257 10 40 587 25 581 0.0 577
Msa0603490 AT5G58910.1 51.481 540 241 7 52 587 1 523 0.0 571
Msa0603490 AT2G30210.1 50.172 580 268 9 16 587 4 570 0.0 571
Msa0603490 AT5G01190.2 53.585 530 232 6 60 587 27 544 0.0 566
Msa0603490 AT5G07130.1 50.090 553 256 11 46 587 26 569 0.0 528
Msa0603490 AT2G46570.1 45.078 579 289 11 20 587 9 569 1.12e-180 522
Msa0603490 AT5G09360.1 44.580 572 291 12 22 587 18 569 2.34e-172 501
Msa0603490 AT3G09220.1 46.618 547 273 8 32 570 15 550 1.53e-171 499
Msa0603490 AT5G48100.1 45.688 545 276 11 42 577 20 553 1.40e-163 478
Msa0603490 AT5G07130.2 50.101 493 226 11 106 587 1 484 5.48e-158 461
Msa0603490 AT5G07130.3 50.101 493 226 11 106 587 1 484 5.48e-158 461
Msa0603490 AT5G01050.1 42.782 568 298 10 32 587 16 568 5.67e-155 457
Msa0603490 AT2G46570.2 44.711 501 249 10 98 587 1 484 5.26e-152 446
Msa0603490 AT5G01040.1 42.403 566 301 10 32 587 16 566 5.56e-152 449
Msa0603490 AT3G09220.2 47.619 462 224 7 117 570 2 453 1.97e-142 421
Msa0603490 AT4G39830.1 30.906 563 318 19 44 570 36 563 5.30e-69 234
Msa0603490 AT5G21105.1 30.653 597 346 19 17 577 9 573 6.35e-69 234
Msa0603490 AT5G21100.1 30.515 544 302 17 59 566 39 542 2.82e-67 229
Msa0603490 AT5G21105.3 30.851 564 321 21 17 545 9 538 3.80e-60 209
Msa0603490 AT4G39830.2 29.821 503 279 17 105 570 3 468 1.27e-49 179
Msa0603490 AT4G39830.3 29.920 498 275 17 110 570 6 466 2.86e-49 178
Msa0603490 AT4G12420.1 26.996 526 325 13 46 552 27 512 1.29e-46 173
Msa0603490 AT4G12420.2 26.996 526 325 13 46 552 27 512 1.29e-46 173
Msa0603490 AT4G39830.4 28.884 502 272 16 105 570 3 455 8.02e-45 166
Msa0603490 AT1G75790.1 27.509 578 369 19 20 587 4 541 2.36e-44 166
Msa0603490 AT5G51480.1 27.725 523 315 15 46 547 30 510 2.60e-44 166
Msa0603490 AT4G25240.2 26.644 593 359 17 15 580 1 544 7.85e-44 165
Msa0603490 AT4G25240.1 26.644 593 359 17 15 580 1 544 7.85e-44 165
Msa0603490 AT5G21105.2 32.033 359 208 10 228 577 51 382 1.69e-38 146
Msa0603490 AT5G48450.2 26.731 520 340 17 46 561 31 513 7.22e-37 145
Msa0603490 AT1G21860.1 25.000 540 345 14 23 553 8 496 7.88e-37 144
Msa0603490 AT5G48450.1 26.731 520 340 17 46 561 31 513 1.35e-36 145
Msa0603490 AT1G21850.1 24.205 566 346 17 1 553 1 496 3.17e-36 143
Msa0603490 AT1G76160.1 24.660 588 369 17 13 587 4 530 2.30e-32 131
Msa0603490 AT4G22010.1 25.312 561 346 20 44 587 26 530 6.51e-31 127
Msa0603490 AT5G66920.1 23.883 515 336 14 44 551 37 502 7.38e-31 127
Msa0603490 AT1G41830.1 23.717 565 387 14 24 587 10 531 1.40e-30 126
Msa0603490 AT3G13390.1 25.540 509 335 14 45 547 29 499 2.67e-27 116
Msa0603490 AT4G37160.1 23.935 493 333 13 62 553 49 500 5.79e-27 115
Msa0603490 AT4G28090.1 22.587 549 380 13 43 587 27 534 1.16e-26 114
Msa0603490 AT3G13400.2 25.000 504 343 14 45 547 28 497 1.10e-25 111
Msa0603490 AT3G13400.1 25.000 504 343 14 45 547 28 497 1.10e-25 111
Msa0603490 AT1G55570.1 24.852 507 341 15 45 547 30 500 1.25e-25 111
Msa0603490 AT4G38420.1 21.526 511 365 13 44 553 30 505 1.25e-24 108
Msa0603490 AT2G23630.1 25.462 487 320 14 62 547 48 492 4.19e-24 106
Msa0603490 AT2G23630.2 25.462 487 320 14 62 547 53 497 4.26e-24 107
Msa0603490 AT1G55560.1 29.455 275 183 7 62 335 44 308 9.56e-24 105
Msa0603490 AT4G38420.3 21.355 487 347 13 44 529 30 481 2.29e-20 95.1
Msa0603490 AT4G37160.2 27.016 248 169 4 62 308 49 285 2.56e-20 94.4
Msa0603490 AT4G38420.2 26.087 276 193 6 44 318 30 295 2.65e-20 94.4

Find 172 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTTCCATGTAAATTTA+AGG 0.077214 4_2:-48061624 Msa0603490:three_prime_UTR
GGCACATTTGCAGGGTATTT+TGG 0.173773 4_2:+48062830 None:intergenic
TCTGATGCCTACACCATTAA+TGG 0.176037 4_2:-48063880 Msa0603490:CDS
ATTGCAGGATACAAGCATTT+TGG 0.187461 4_2:-48062492 Msa0603490:CDS
TTTGAATTTGAACTATTATT+TGG 0.212461 4_2:+48062728 None:intergenic
TGCACCTTAGTTGGGGATTA+AGG 0.227331 4_2:-48061803 Msa0603490:CDS
CTTCTCCAACAACATTTCTT+TGG 0.228697 4_2:-48062656 Msa0603490:CDS
CATGTAAATTTAAGGATTTA+TGG 0.246154 4_2:-48061616 Msa0603490:three_prime_UTR
CATTTCTTTGGAACTAATAA+TGG 0.256030 4_2:-48062644 Msa0603490:CDS
AACCTCCCCTGGATTTGTTT+TGG 0.259173 4_2:-48066080 Msa0603490:CDS
TTTGTTGTTGGTCAAGGTTT+TGG 0.271917 4_2:-48062428 Msa0603490:CDS
AATATCATTGTACTTACTTA+AGG 0.293923 4_2:-48061437 Msa0603490:three_prime_UTR
GTTTCTTTAGTAAGGAAAAT+TGG 0.294923 4_2:+48061681 None:intergenic
TAACTCTGACCTGTTTGAAT+TGG 0.297459 4_2:+48064329 None:intergenic
CTTTGATGTGCACCTTAGTT+GGG 0.307238 4_2:-48061811 Msa0603490:CDS
AATACTGTTGCTGTGCCTTC+TGG 0.309543 4_2:-48062347 Msa0603490:CDS
AATGTGGCATTTGGGTAATT+TGG 0.312994 4_2:+48063046 None:intergenic
ACGAGAAGGGGACAGATTAT+TGG 0.313664 4_2:-48065780 Msa0603490:CDS
CAATGCAGGCTGATATTGTT+TGG 0.314456 4_2:+48065737 None:intergenic
TGCTGTGCCTTCTGGTGGTT+GGG 0.319801 4_2:-48062339 Msa0603490:CDS
TACACCATTAATGGGTTTCC+TGG 0.319870 4_2:-48063871 Msa0603490:CDS
TTGGTGTAGTAATCAACATT+TGG 0.322522 4_2:+48061713 None:intergenic
TGGTGTAGTAATCAACATTT+GGG 0.326399 4_2:+48061714 None:intergenic
AGTCATCCTTTGCATCTTCA+TGG 0.334535 4_2:-48062461 Msa0603490:CDS
AAGGAAGTCCCCATTCTCTT+TGG 0.338186 4_2:-48064167 Msa0603490:intron
ACCTGAACTCTAGTGTTATA+TGG 0.345887 4_2:+48062518 None:intergenic
GCTTGTGCAATTACAGCTTC+AGG 0.346802 4_2:+48063931 None:intergenic
TCCTTAAATTTACATGGAAA+TGG 0.350319 4_2:+48061623 None:intergenic
TGGTTAAGAGCTACTGTCTA+TGG 0.350969 4_2:-48064245 Msa0603490:CDS
ATATCATTGTACTTACTTAA+GGG 0.353683 4_2:-48061436 Msa0603490:three_prime_UTR
GGATTTAATTTCTTTGTTGT+TGG 0.356145 4_2:-48062440 Msa0603490:CDS
AAAAGCATTGTTACCGTGAA+TGG 0.357160 4_2:-48065830 Msa0603490:CDS
TTACTAACCAAAGTATTGTT+TGG 0.366291 4_2:+48062563 None:intergenic
CATGGAAATGGAAATGGAAA+TGG 0.370370 4_2:+48061635 None:intergenic
CTGATGCCTACACCATTAAT+GGG 0.371595 4_2:-48063879 Msa0603490:CDS
AATTTACATGGAAATGGAAA+TGG 0.372179 4_2:+48061629 None:intergenic
TATTTGGTCCTTGACAAGTT+TGG 0.374143 4_2:+48062744 None:intergenic
AGAAAAGGGTTTCTTTAGTA+AGG 0.376132 4_2:+48061673 None:intergenic
TTGCTGTGCCTTCTGGTGGT+TGG 0.376214 4_2:-48062340 Msa0603490:CDS
AGGTCCAGGAAACCCATTAA+TGG 0.377126 4_2:+48063867 None:intergenic
AACTCTGACCTGTTTGAATT+GGG 0.379719 4_2:+48064330 None:intergenic
AACAAAATTAGTATCATTGA+TGG 0.379750 4_2:+48062889 None:intergenic
CAACATTTGGGGAGATCCTT+AGG 0.380323 4_2:+48061726 None:intergenic
AGCATGTAGAATGTGGCATT+TGG 0.380488 4_2:+48063037 None:intergenic
GACAAAGAGGAACTCTCTTC+TGG 0.381182 4_2:-48064283 Msa0603490:CDS
AGGGGACAGATTATTGGTTA+AGG 0.383575 4_2:-48065774 Msa0603490:CDS
TCAACAAGATTAAACCTTGC+AGG 0.384892 4_2:+48062383 None:intergenic
GTACCCTGCCCTGTGAAATA+TGG 0.385825 4_2:+48063007 None:intergenic
TACCGTGAATGGGAAGTTCC+CGG 0.390467 4_2:-48065819 Msa0603490:CDS
CATAAATCCTTAAATTTACA+TGG 0.392188 4_2:+48061617 None:intergenic
TAGAGTTCAGGTTATATTGC+AGG 0.393539 4_2:-48062507 Msa0603490:CDS
AACTATCTTGTACTCATTCA+AGG 0.405635 4_2:-48066188 Msa0603490:five_prime_UTR
GAGAATGGGGACTTCCTTGT+AGG 0.406530 4_2:+48064172 None:intergenic
GTGTAGGCATCAGAAACATT+TGG 0.413299 4_2:+48063889 None:intergenic
GCATGTAGAATGTGGCATTT+GGG 0.416680 4_2:+48063038 None:intergenic
ACTTTGATGTGCACCTTAGT+TGG 0.416806 4_2:-48061812 Msa0603490:CDS
ACCTTCCTCTTAACCTCCCC+TGG 0.418136 4_2:-48066091 Msa0603490:CDS
AAAATCAAAAGGTGTAGAAA+AGG 0.418687 4_2:+48061658 None:intergenic
ACCATATAACACTAGAGTTC+AGG 0.422189 4_2:-48062519 Msa0603490:CDS
GTATAGTTAAACGGCCTTAA+CGG 0.423945 4_2:+48062596 None:intergenic
TTCGACAATTCCACAGTAGC+TGG 0.425573 4_2:-48062983 Msa0603490:CDS
AATTTCTTTGTTGTTGGTCA+AGG 0.431250 4_2:-48062434 Msa0603490:CDS
TTAAGGCCGTTTAACTATAC+AGG 0.432215 4_2:-48062593 Msa0603490:CDS
GATAAGATTCATTGTGCCTT+GGG 0.433565 4_2:+48064207 None:intergenic
CAAATCCAGGGGAGGTTAAG+AGG 0.435761 4_2:+48066086 None:intergenic
GTGTACAACTTCACCATTGT+TGG 0.440870 4_2:-48064305 Msa0603490:CDS
TTCATATGTACCAAAGAGAA+TGG 0.444243 4_2:+48064157 None:intergenic
AACGGCCTTAACGGTACAAC+CGG 0.445112 4_2:+48062605 None:intergenic
TGTAGGCATCAGAAACATTT+GGG 0.450843 4_2:+48063890 None:intergenic
GTTGGGGATTAAGGATGGCT+TGG 0.452720 4_2:-48061794 Msa0603490:CDS
AATGAGTACAAGATAGTTGA+AGG 0.454547 4_2:+48066193 None:intergenic
GCAACAGTATTCCTCTCAAC+AGG 0.458149 4_2:+48062359 None:intergenic
AACTCCTCCAAACAATACTT+TGG 0.459111 4_2:-48062570 Msa0603490:CDS
GGATAAGATTCATTGTGCCT+TGG 0.462220 4_2:+48064206 None:intergenic
GGAAAATTGGCAGAGTCAAT+TGG 0.466366 4_2:+48061694 None:intergenic
TCATTGATGGCTGGAAGCAC+AGG 0.471762 4_2:+48062902 None:intergenic
AAAATAGTTCTTACCAATGC+AGG 0.472186 4_2:+48065723 None:intergenic
GGAGTTCCTGTATAGTTAAA+CGG 0.473322 4_2:+48062587 None:intergenic
TCATATGTACCAAAGAGAAT+GGG 0.475158 4_2:+48064158 None:intergenic
TCTGGCATGCTCATTTCTCA+TGG 0.475847 4_2:-48064265 Msa0603490:CDS
AACAATACTTTGGTTAGTAA+TGG 0.478654 4_2:-48062560 Msa0603490:CDS
AAATCAAAAGGTGTAGAAAA+GGG 0.479134 4_2:+48061659 None:intergenic
TAGTTCCAAAGAAATGTTGT+TGG 0.480695 4_2:+48062651 None:intergenic
ATTATTTCTGCAGATAAGGT+TGG 0.482733 4_2:-48065879 Msa0603490:intron
ATTGCACAAGCTCTGCAGAC+AGG 0.483287 4_2:-48063919 Msa0603490:CDS
ACTCAATGCCCAATTCAAAC+AGG 0.483829 4_2:-48064338 Msa0603490:CDS
AATGGAAATGGAAAATCAAA+AGG 0.487974 4_2:+48061647 None:intergenic
GAAGTAGCCAAAACAAATCC+AGG 0.492773 4_2:+48066073 None:intergenic
TTCACCATTGTTGGACAAAG+AGG 0.495747 4_2:-48064296 Msa0603490:CDS
GGGCATTGAGTTATGTATGA+TGG 0.498399 4_2:+48064350 None:intergenic
AAAGCATTGTTACCGTGAAT+GGG 0.498663 4_2:-48065829 Msa0603490:CDS
TGATACAATGAAAGAAAGAC+TGG 0.498850 4_2:+48061529 None:intergenic
CCTTCTCGTACAACAATTCG+AGG 0.499048 4_2:+48065794 None:intergenic
TGGTCCAAGTATGATGGTAT+TGG 0.499764 4_2:+48063102 None:intergenic
TGCAGAGAGTGAAGTGTGTC+CGG 0.503416 4_2:-48061570 Msa0603490:three_prime_UTR
ACCCGGGAACTTCCCATTCA+CGG 0.507216 4_2:+48065817 None:intergenic
GAGCAATTGTAAAGAGGTCC+AGG 0.507787 4_2:+48063853 None:intergenic
CTTCGTAGTGGTTGGTCGGA+TGG 0.508027 4_2:-48064374 Msa0603490:CDS
CGATACCTTGCTGACAATCC+AGG 0.508335 4_2:-48062308 Msa0603490:intron
CTCGAATTGTTGTACGAGAA+GGG 0.509000 4_2:-48065793 Msa0603490:CDS
TGTTGGAGAAGTGCTATAGA+AGG 0.510179 4_2:+48062668 None:intergenic
CCTCTTTACAATTGCTCCAA+AGG 0.511152 4_2:-48063847 Msa0603490:intron
AAGGATGGCTTGGATTGTTG+AGG 0.513739 4_2:-48061784 Msa0603490:CDS
CCTTAGTTGGGGATTAAGGA+TGG 0.516631 4_2:-48061799 Msa0603490:CDS
ATTCATTGTGCCTTGGGAGA+AGG 0.517082 4_2:+48064213 None:intergenic
AGAATGGGGACTTCCTTGTA+GGG 0.517590 4_2:+48064173 None:intergenic
TTTGATGTGCACCTTAGTTG+GGG 0.517799 4_2:-48061810 Msa0603490:CDS
ATGGCTTGGATTGTTGAGGA+TGG 0.518174 4_2:-48061780 Msa0603490:CDS
TAGACCATATTTCACAGGGC+AGG 0.518387 4_2:-48063011 Msa0603490:CDS
AAAATTGCATCCTCCTCCTA+AGG 0.524928 4_2:-48061742 Msa0603490:CDS
GACAGATACATACAAATTGA+AGG 0.527305 4_2:-48063254 Msa0603490:intron
CTAGCTAGACCATATTTCAC+AGG 0.529517 4_2:-48063016 Msa0603490:CDS
GATAAAACGCTTGAATCATA+CGG 0.529877 4_2:+48061315 None:intergenic
TACAAATTGAAGGTGAAGCC+AGG 0.530121 4_2:-48063244 Msa0603490:CDS
ACCGTGAATGGGAAGTTCCC+GGG 0.531907 4_2:-48065818 Msa0603490:CDS
GTATGGTCGAAACAGGTGTT+TGG 0.534204 4_2:-48061848 Msa0603490:intron
AGAACATTTGTGGTTTGACC+TGG 0.536892 4_2:+48063082 None:intergenic
CTAACCAAAGTATTGTTTGG+AGG 0.538509 4_2:+48062566 None:intergenic
TTGCACAAGCTCTGCAGACA+GGG 0.538737 4_2:-48063918 Msa0603490:CDS
GAGTCCAATACCATCATACT+TGG 0.543746 4_2:-48063106 Msa0603490:CDS
ATGCTAGTATTGACCCTGCA+AGG 0.544490 4_2:-48062397 Msa0603490:CDS
CCTCGAATTGTTGTACGAGA+AGG 0.546915 4_2:-48065794 Msa0603490:CDS
ACTGTTGCTGTGCCTTCTGG+TGG 0.553231 4_2:-48062344 Msa0603490:CDS
CCTTTGGAGCAATTGTAAAG+AGG 0.556173 4_2:+48063847 None:intergenic
TTGGGGAGATCCTTAGGAGG+AGG 0.561208 4_2:+48061732 None:intergenic
TCTGCAGATAAGGTTGGCAA+AGG 0.561585 4_2:-48065873 Msa0603490:intron
TGTCACTGTTCCATTATCAA+AGG 0.562747 4_2:-48066143 Msa0603490:CDS
CGTACAACAATTCGAGGACC+CGG 0.566305 4_2:+48065800 None:intergenic
CCATCCTTAATCCCCAACTA+AGG 0.569779 4_2:+48061799 None:intergenic
GAATCATCATATACTAGTGC+CGG 0.571850 4_2:+48061551 None:intergenic
TGAGACAACTTCGTAGTGGT+TGG 0.574177 4_2:-48064382 Msa0603490:CDS
TTAAATCCATGAAGATGCAA+AGG 0.575251 4_2:+48062455 None:intergenic
TTCTAAAATTCCAGCTACTG+TGG 0.577452 4_2:+48062973 None:intergenic
AGGAAACCCATTAATGGTGT+AGG 0.579472 4_2:+48063873 None:intergenic
AAATTAGTATCATTGATGGC+TGG 0.579956 4_2:+48062893 None:intergenic
CAAACAATATCAGCCTGCAT+TGG 0.581284 4_2:-48065736 Msa0603490:intron
AATCACCTGGATTGTCAGCA+AGG 0.581837 4_2:+48062303 None:intergenic
TTGACCTGGTCCAAGTATGA+TGG 0.586103 4_2:+48063096 None:intergenic
GACCTCTCATCCTTCTCCCA+AGG 0.596454 4_2:-48064223 Msa0603490:CDS
TCCAGGGGAGGTTAAGAGGA+AGG 0.601150 4_2:+48066090 None:intergenic
ACAACTTCGTAGTGGTTGGT+CGG 0.604046 4_2:-48064378 Msa0603490:CDS
AAGTAGCCAAAACAAATCCA+GGG 0.606149 4_2:+48066074 None:intergenic
ATCTTGTTGATCCTGTTGAG+AGG 0.606779 4_2:-48062370 Msa0603490:CDS
AGTTCCTCTTTGTCCAACAA+TGG 0.608427 4_2:+48064292 None:intergenic
AGACCATATTTCACAGGGCA+GGG 0.613998 4_2:-48063010 Msa0603490:CDS
CAACAAGATTAAACCTTGCA+GGG 0.615814 4_2:+48062384 None:intergenic
TCGAATTGTTGTACGAGAAG+GGG 0.619585 4_2:-48065792 Msa0603490:CDS
CATTTGGGGAGATCCTTAGG+AGG 0.640212 4_2:+48061729 None:intergenic
TGCACAGTATATGCAAAATG+TGG 0.642341 4_2:+48061589 None:intergenic
ATCGCAACCCAACCACCAGA+AGG 0.645168 4_2:+48062332 None:intergenic
TGCCTTGGGAGAAGGATGAG+AGG 0.645507 4_2:+48064221 None:intergenic
ATGATGGTATTGGACTCGAA+TGG 0.647830 4_2:+48063112 None:intergenic
CATATGTACCAAAGAGAATG+GGG 0.650276 4_2:+48064159 None:intergenic
TGGACTAGTTCCTAGTCCAA+CGG 0.652330 4_2:+48062778 None:intergenic
GACAAATATGCATAGGTGAG+TGG 0.653174 4_2:-48063966 Msa0603490:intron
AGCCAAAACAAATCCAGGGG+AGG 0.654034 4_2:+48066078 None:intergenic
GTACAACAATTCGAGGACCC+GGG 0.658530 4_2:+48065801 None:intergenic
AAATATGCATAGGTGAGTGG+TGG 0.659012 4_2:-48063963 Msa0603490:intron
TCTAGCTAGCATGTAGAATG+TGG 0.659413 4_2:+48063030 None:intergenic
TGCACAAGCTCTGCAGACAG+GGG 0.660853 4_2:-48063917 Msa0603490:CDS
TAAGGTTGGCAAAGGTTACG+AGG 0.665174 4_2:-48065865 Msa0603490:CDS
AAGATGCATCTGCTTCGACA+AGG 0.668532 4_2:+48063143 None:intergenic
GCACAAGCTCTGCAGACAGG+GGG 0.670081 4_2:-48063916 Msa0603490:CDS
AACTAAGGTGCACATCAAAG+TGG 0.677837 4_2:+48061814 None:intergenic
TAGCTAGACCATATTTCACA+GGG 0.683532 4_2:-48063015 Msa0603490:CDS
AATACCATCATACTTGGACC+AGG 0.697209 4_2:-48063100 Msa0603490:CDS
TAGTAATGGTACAAAGACAG+TGG 0.701875 4_2:-48062546 Msa0603490:CDS
AGTAGCCAAAACAAATCCAG+GGG 0.722267 4_2:+48066075 None:intergenic
AGGGGAGGTTAAGAGGAAGG+TGG 0.734018 4_2:+48066093 None:intergenic
GGTGTAGTAATCAACATTTG+GGG 0.734375 4_2:+48061715 None:intergenic
GGTGTGAGACAACTTCGTAG+TGG 0.741558 4_2:-48064386 Msa0603490:CDS
TATCTTGTACTCATTCAAGG+TGG 0.745577 4_2:-48066185 Msa0603490:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTTTTTATTT+TGG + chr4_2:48062869-48062888 None:intergenic 0.0%
!! TTTATTATAAATTTATACTG+AGG + chr4_2:48063396-48063415 None:intergenic 10.0%
!! AAAAAAATATATGATATGAA+AGG - chr4_2:48063506-48063525 Msa0603490:intron 10.0%
!!! CATATAAATAACTTTTTTTT+AGG + chr4_2:48065579-48065598 None:intergenic 10.0%
!!! AACTTTTTATTCAAAAAAAA+AGG - chr4_2:48066114-48066133 Msa0603490:CDS 10.0%
!!! ACTTTTTATTCAAAAAAAAA+GGG - chr4_2:48066115-48066134 Msa0603490:CDS 10.0%
!! TTAAGTGATAAATATTTGAA+AGG + chr4_2:48061540-48061559 None:intergenic 15.0%
!!! TTTTTACATTTATATTGTAG+AGG - chr4_2:48061983-48062002 Msa0603490:intron 15.0%
!!! TTTTTATTTGTTTGATCATT+TGG + chr4_2:48064581-48064600 None:intergenic 15.0%
!! TTTGAATTTGAACTATTATT+TGG + chr4_2:48064794-48064813 None:intergenic 15.0%
!!! ATTGACTTAATTATTTAATC+TGG + chr4_2:48065491-48065510 None:intergenic 15.0%
!!! ATGTATTTTTCTCATATTTT+TGG - chr4_2:48066162-48066181 Msa0603490:CDS 15.0%
!! ACTACATATGTTATACAATT+TGG + chr4_2:48061582-48061601 None:intergenic 20.0%
!!! TTTTATTATTTCTGCAGATA+AGG - chr4_2:48061636-48061655 Msa0603490:three_prime_UTR 20.0%
!!! TGTTTTTAATGATGTTTACA+TGG + chr4_2:48062065-48062084 None:intergenic 20.0%
!!! GAATTAAAAAAATGGGTTAA+AGG + chr4_2:48062193-48062212 None:intergenic 20.0%
!! TCTTGGTGAATTAAAAAAAT+GGG + chr4_2:48062200-48062219 None:intergenic 20.0%
!! ATCTTGGTGAATTAAAAAAA+TGG + chr4_2:48062201-48062220 None:intergenic 20.0%
!!! ATTTTTTTAATTCACCAAGA+TGG - chr4_2:48062200-48062219 Msa0603490:intron 20.0%
!!! TTTTCTTACAATAATAGCTA+TGG - chr4_2:48062787-48062806 Msa0603490:CDS 20.0%
!! AATAATTCATTTCATGCATA+TGG + chr4_2:48063061-48063080 None:intergenic 20.0%
!! TGTACTAATATTGACAATAA+TGG - chr4_2:48063080-48063099 Msa0603490:CDS 20.0%
!!! AAATTAGTTTGTAAAATGAG+AGG + chr4_2:48064138-48064157 None:intergenic 20.0%
!!! TTTTTGAAAGATGAATTGAT+TGG - chr4_2:48064225-48064244 Msa0603490:CDS 20.0%
!!! AGTTTTTAATAGAACATTTG+TGG + chr4_2:48064450-48064469 None:intergenic 20.0%
!! AACAAAATTAGTATCATTGA+TGG + chr4_2:48064633-48064652 None:intergenic 20.0%
!!! AAGTTTTTGTCAATAGTTTT+AGG + chr4_2:48064713-48064732 None:intergenic 20.0%
!!! AACTAATAATGGTTTTACAA+CGG - chr4_2:48064886-48064905 Msa0603490:intron 20.0%
!! AATTATTTAATCTGGTCTAT+TGG + chr4_2:48065483-48065502 None:intergenic 20.0%
!! CATAAATCCTTAAATTTACA+TGG + chr4_2:48065905-48065924 None:intergenic 20.0%
!! CATGTAAATTTAAGGATTTA+TGG - chr4_2:48065903-48065922 Msa0603490:intron 20.0%
!! AATATCATTGTACTTACTTA+AGG - chr4_2:48066082-48066101 Msa0603490:CDS 20.0%
!! ATATCATTGTACTTACTTAA+GGG - chr4_2:48066083-48066102 Msa0603490:CDS 20.0%
! CATATGTTATACAATTTGGT+AGG + chr4_2:48061578-48061597 None:intergenic 25.0%
!!! AAACTAAGTGTTGAGAAAAT+AGG - chr4_2:48061882-48061901 Msa0603490:intron 25.0%
! AAACAAATAAAACTTGCAAC+CGG - chr4_2:48062080-48062099 Msa0603490:intron 25.0%
! AATATCAAAAAACTCAGATC+TGG - chr4_2:48062423-48062442 Msa0603490:CDS 25.0%
!!! TTGTTGATGGTTATAAAAAC+AGG - chr4_2:48062556-48062575 Msa0603490:CDS 25.0%
!!! TTTCTAGTTGTATTGTTGAA+TGG - chr4_2:48062594-48062613 Msa0603490:CDS 25.0%
!!! TACTTGGTAGTTTTAAGAAT+GGG - chr4_2:48062626-48062645 Msa0603490:CDS 25.0%
! AATAATAGCTATGGTGTTTA+CGG - chr4_2:48062796-48062815 Msa0603490:CDS 25.0%
!!! TTTTTATTTTGGCATATGAC+TGG + chr4_2:48062858-48062877 None:intergenic 25.0%
! ATGTACAACATACAATATAG+GGG + chr4_2:48063018-48063037 None:intergenic 25.0%
! GATGTACAACATACAATATA+GGG + chr4_2:48063019-48063038 None:intergenic 25.0%
! TGATGTACAACATACAATAT+AGG + chr4_2:48063020-48063039 None:intergenic 25.0%
! ATATTGTATGTTGTACATCA+TGG - chr4_2:48063020-48063039 Msa0603490:CDS 25.0%
!!! TGGTATTTTATATTTCTAGC+TGG - chr4_2:48063431-48063450 Msa0603490:intron 25.0%
!!! CTGGAGTTTATACTTTTTTA+AGG - chr4_2:48063450-48063469 Msa0603490:intron 25.0%
! TATCTTTGACAAATATGCAT+AGG - chr4_2:48063546-48063565 Msa0603490:intron 25.0%
!! AACATTTTCTTTATCCTAAG+TGG + chr4_2:48064090-48064109 None:intergenic 25.0%
! ACTAGAATTGATGAATTGAT+TGG - chr4_2:48064192-48064211 Msa0603490:CDS 25.0%
!!! ATTGGTTTGTTATCATATCA+TGG - chr4_2:48064243-48064262 Msa0603490:CDS 25.0%
!!! AAAAACTTTTTCTTTACCGT+TGG - chr4_2:48064725-48064744 Msa0603490:intron 25.0%
!!! CATTTCTTTGGAACTAATAA+TGG - chr4_2:48064875-48064894 Msa0603490:intron 25.0%
!!! TTACTAACCAAAGTATTGTT+TGG + chr4_2:48064959-48064978 None:intergenic 25.0%
! AACAATACTTTGGTTAGTAA+TGG - chr4_2:48064959-48064978 Msa0603490:intron 25.0%
!! GGATTTAATTTCTTTGTTGT+TGG - chr4_2:48065079-48065098 Msa0603490:intron 25.0%
! AGCTTATGAAATCAGTTTAT+AGG + chr4_2:48065352-48065371 None:intergenic 25.0%
!!! ATCTATTTGCTATGAATGTA+TGG - chr4_2:48065654-48065673 Msa0603490:intron 25.0%
! GTTTCTTTAGTAAGGAAAAT+TGG + chr4_2:48065841-48065860 None:intergenic 25.0%
!! AAATCAAAAGGTGTAGAAAA+GGG + chr4_2:48065863-48065882 None:intergenic 25.0%
!! AAAATCAAAAGGTGTAGAAA+AGG + chr4_2:48065864-48065883 None:intergenic 25.0%
! AATGGAAATGGAAAATCAAA+AGG + chr4_2:48065875-48065894 None:intergenic 25.0%
! AATTTACATGGAAATGGAAA+TGG + chr4_2:48065893-48065912 None:intergenic 25.0%
! TCCATTTCCATGTAAATTTA+AGG - chr4_2:48065895-48065914 Msa0603490:intron 25.0%
! TCCTTAAATTTACATGGAAA+TGG + chr4_2:48065899-48065918 None:intergenic 25.0%
!!! TTTTTGGTCACTTGAAAATT+AGG + chr4_2:48066029-48066048 None:intergenic 25.0%
! TTCAAGTGACCAAAAAATAA+AGG - chr4_2:48066033-48066052 Msa0603490:intron 25.0%
AATGAGTACAAGATAGTTGA+AGG + chr4_2:48061329-48061348 None:intergenic 30.0%
AACTATCTTGTACTCATTCA+AGG - chr4_2:48061331-48061350 Msa0603490:three_prime_UTR 30.0%
!! ATTATTTCTGCAGATAAGGT+TGG - chr4_2:48061640-48061659 Msa0603490:three_prime_UTR 30.0%
AAAATAGTTCTTACCAATGC+AGG + chr4_2:48061799-48061818 None:intergenic 30.0%
! TGTGAGTTTTGCAGTTAATT+AGG + chr4_2:48061861-48061880 None:intergenic 30.0%
TGAGAAAATAGGATTTGAAC+CGG - chr4_2:48061893-48061912 Msa0603490:intron 30.0%
TTAGATACTTGCTCAACTAT+TGG - chr4_2:48062038-48062057 Msa0603490:intron 30.0%
AAAAATTAAACCAACACAGC+CGG + chr4_2:48062102-48062121 None:intergenic 30.0%
!! TTTTTAATTCACCAAGATGG+TGG - chr4_2:48062203-48062222 Msa0603490:intron 30.0%
!!! CTCACTCTATCTTTTTTGAA+TGG + chr4_2:48062314-48062333 None:intergenic 30.0%
CAAAAAAGATAGAGTGAGAA+CGG - chr4_2:48062316-48062335 Msa0603490:CDS 30.0%
!!! GTACTTGGTAGTTTTAAGAA+TGG - chr4_2:48062625-48062644 Msa0603490:CDS 30.0%
!!! ACTTGGTAGTTTTAAGAATG+GGG - chr4_2:48062627-48062646 Msa0603490:CDS 30.0%
ATAATAGCTATGGTGTTTAC+GGG - chr4_2:48062797-48062816 Msa0603490:CDS 30.0%
AAAATAGTGACTTAGAGATC+CGG - chr4_2:48062899-48062918 Msa0603490:CDS 30.0%
!!! GCTTGTTTTAAATTGGATAC+CGG + chr4_2:48062929-48062948 None:intergenic 30.0%
!!! CTTCACAGCTTGTTTTAAAT+TGG + chr4_2:48062936-48062955 None:intergenic 30.0%
! ATTTAAAACAAGCTGTGAAG+TGG - chr4_2:48062936-48062955 Msa0603490:CDS 30.0%
TGCATGCATGATAAAAAAAC+AGG - chr4_2:48063107-48063126 Msa0603490:CDS 30.0%
TCATATGTACCAAAGAGAAT+GGG + chr4_2:48063364-48063383 None:intergenic 30.0%
TTCATATGTACCAAAGAGAA+TGG + chr4_2:48063365-48063384 None:intergenic 30.0%
GACAGATACATACAAATTGA+AGG - chr4_2:48064265-48064284 Msa0603490:CDS 30.0%
! CGTAATAGATATGTTTTTCC+TGG + chr4_2:48064296-48064315 None:intergenic 30.0%
! AAATTAGTATCATTGATGGC+TGG + chr4_2:48064629-48064648 None:intergenic 30.0%
!!! CTTGACAAGTTTGGTTTTTT+GGG + chr4_2:48064769-48064788 None:intergenic 30.0%
TAGTTCCAAAGAAATGTTGT+TGG + chr4_2:48064871-48064890 None:intergenic 30.0%
TTAAATCCATGAAGATGCAA+AGG + chr4_2:48065067-48065086 None:intergenic 30.0%
!! AATTTCTTTGTTGTTGGTCA+AGG - chr4_2:48065085-48065104 Msa0603490:intron 30.0%
!! CTTATTTTCGTAAGTTCTCT+AGG + chr4_2:48065377-48065396 None:intergenic 30.0%
TGGTGTAGTAATCAACATTT+GGG + chr4_2:48065808-48065827 None:intergenic 30.0%
TTGGTGTAGTAATCAACATT+TGG + chr4_2:48065809-48065828 None:intergenic 30.0%
AGAAAAGGGTTTCTTTAGTA+AGG + chr4_2:48065849-48065868 None:intergenic 30.0%
TGATACAATGAAAGAAAGAC+TGG + chr4_2:48065993-48066012 None:intergenic 30.0%
AAGTGACCAAAAAATAAAGG+TGG - chr4_2:48066036-48066055 Msa0603490:CDS 30.0%
AGTGACCAAAAAATAAAGGT+GGG - chr4_2:48066037-48066056 Msa0603490:CDS 30.0%
GATAAAACGCTTGAATCATA+CGG + chr4_2:48066207-48066226 None:intergenic 30.0%
TATCTTGTACTCATTCAAGG+TGG - chr4_2:48061334-48061353 Msa0603490:three_prime_UTR 35.0%
TGTCACTGTTCCATTATCAA+AGG - chr4_2:48061376-48061395 Msa0603490:three_prime_UTR 35.0%
GCAAAAAGAGCCTTTGATAA+TGG + chr4_2:48061389-48061408 None:intergenic 35.0%
AAGTAGCCAAAACAAATCCA+GGG + chr4_2:48061448-48061467 None:intergenic 35.0%
!! AAAAGCATTGTTACCGTGAA+TGG - chr4_2:48061689-48061708 Msa0603490:three_prime_UTR 35.0%
!! AAAGCATTGTTACCGTGAAT+GGG - chr4_2:48061690-48061709 Msa0603490:three_prime_UTR 35.0%
CAACGACATTTGATATGCTT+GGG + chr4_2:48061921-48061940 None:intergenic 35.0%
ACAACGACATTTGATATGCT+TGG + chr4_2:48061922-48061941 None:intergenic 35.0%
AGAAAATCAGTGTTCCGATA+TGG + chr4_2:48062251-48062270 None:intergenic 35.0%
CTTGAGTGGTGAATAAATTG+TGG - chr4_2:48062269-48062288 Msa0603490:intron 35.0%
AATATGGCGACAAAAGTGAT+TGG - chr4_2:48062353-48062372 Msa0603490:CDS 35.0%
!! TTAGTTTGTCGTGTGACATT+TGG + chr4_2:48062392-48062411 None:intergenic 35.0%
AAAAAACTCAGATCTGGAGA+AGG - chr4_2:48062429-48062448 Msa0603490:CDS 35.0%
! ATTTGTCACTTGTGAGGAAT+TGG - chr4_2:48062529-48062548 Msa0603490:CDS 35.0%
GTATTGTTGAATGGTTGTGT+TGG - chr4_2:48062603-48062622 Msa0603490:CDS 35.0%
!! CATAGTTTGTTGCTAGATGA+AGG - chr4_2:48062702-48062721 Msa0603490:CDS 35.0%
TTTGTTGCTAGATGAAGGTT+TGG - chr4_2:48062707-48062726 Msa0603490:CDS 35.0%
TTAGGTTTCATGTGGTTCAA+TGG - chr4_2:48062741-48062760 Msa0603490:CDS 35.0%
TAAATTGGATACCGGATTAC+CGG + chr4_2:48062921-48062940 None:intergenic 35.0%
!!! TTAAACACCCGCTTTTTGAT+TGG + chr4_2:48062963-48062982 None:intergenic 35.0%
TGTACATCATGGATCTAGTT+AGG - chr4_2:48063031-48063050 Msa0603490:CDS 35.0%
GCATGATAAAAAAACAGGCA+TGG - chr4_2:48063112-48063131 Msa0603490:CDS 35.0%
AACTCTGACCTGTTTGAATT+GGG + chr4_2:48063192-48063211 None:intergenic 35.0%
TAACTCTGACCTGTTTGAAT+TGG + chr4_2:48063193-48063212 None:intergenic 35.0%
GATAAGATTCATTGTGCCTT+GGG + chr4_2:48063315-48063334 None:intergenic 35.0%
! TCCTTTTCAAAAACCCTACA+AGG - chr4_2:48063333-48063352 Msa0603490:intron 35.0%
!! TCCTTGTAGGGTTTTTGAAA+AGG + chr4_2:48063337-48063356 None:intergenic 35.0%
CATATGTACCAAAGAGAATG+GGG + chr4_2:48063363-48063382 None:intergenic 35.0%
TGTAGGCATCAGAAACATTT+GGG + chr4_2:48063632-48063651 None:intergenic 35.0%
GAAAAAACCAAGTTCCACTT+AGG - chr4_2:48064073-48064092 Msa0603490:intron 35.0%
TCTTTATCCTAAGTGGAACT+TGG + chr4_2:48064083-48064102 None:intergenic 35.0%
AATGTGGCATTTGGGTAATT+TGG + chr4_2:48064476-48064495 None:intergenic 35.0%
TAGCTAGACCATATTTCACA+GGG - chr4_2:48064504-48064523 Msa0603490:intron 35.0%
!! TTCTAAAATTCCAGCTACTG+TGG + chr4_2:48064549-48064568 None:intergenic 35.0%
!!! GAAGCACAGGTTTTAGAATA+TGG + chr4_2:48064607-48064626 None:intergenic 35.0%
!!! TAGTTTTAGGCACATTTGCA+GGG + chr4_2:48064700-48064719 None:intergenic 35.0%
!!! ATAGTTTTAGGCACATTTGC+AGG + chr4_2:48064701-48064720 None:intergenic 35.0%
! TTTTTCTTTACCGTTGGACT+AGG - chr4_2:48064731-48064750 Msa0603490:intron 35.0%
!!! CCTTGACAAGTTTGGTTTTT+TGG + chr4_2:48064770-48064789 None:intergenic 35.0%
CCAAAAAACCAAACTTGTCA+AGG - chr4_2:48064767-48064786 Msa0603490:intron 35.0%
TATTTGGTCCTTGACAAGTT+TGG + chr4_2:48064778-48064797 None:intergenic 35.0%
CTTCTCCAACAACATTTCTT+TGG - chr4_2:48064863-48064882 Msa0603490:intron 35.0%
!! TGGTTTTACAACGGATTTTC+CGG - chr4_2:48064895-48064914 Msa0603490:intron 35.0%
GTATAGTTAAACGGCCTTAA+CGG + chr4_2:48064926-48064945 None:intergenic 35.0%
TTAAGGCCGTTTAACTATAC+AGG - chr4_2:48064926-48064945 Msa0603490:intron 35.0%
GGAGTTCCTGTATAGTTAAA+CGG + chr4_2:48064935-48064954 None:intergenic 35.0%
AACTCCTCCAAACAATACTT+TGG - chr4_2:48064949-48064968 Msa0603490:intron 35.0%
!! CTAACCAAAGTATTGTTTGG+AGG + chr4_2:48064956-48064975 None:intergenic 35.0%
TAGTAATGGTACAAAGACAG+TGG - chr4_2:48064973-48064992 Msa0603490:intron 35.0%
ACCATATAACACTAGAGTTC+AGG - chr4_2:48065000-48065019 Msa0603490:intron 35.0%
ACCTGAACTCTAGTGTTATA+TGG + chr4_2:48065004-48065023 None:intergenic 35.0%
! TAGAGTTCAGGTTATATTGC+AGG - chr4_2:48065012-48065031 Msa0603490:intron 35.0%
! ATTGCAGGATACAAGCATTT+TGG - chr4_2:48065027-48065046 Msa0603490:intron 35.0%
! TTGCAGGATACAAGCATTTT+GGG - chr4_2:48065028-48065047 Msa0603490:intron 35.0%
!!! TTTGTTGTTGGTCAAGGTTT+TGG - chr4_2:48065091-48065110 Msa0603490:intron 35.0%
CAACAAGATTAAACCTTGCA+GGG + chr4_2:48065138-48065157 None:intergenic 35.0%
TCAACAAGATTAAACCTTGC+AGG + chr4_2:48065139-48065158 None:intergenic 35.0%
! TGATTGACTATGGTTCTGTT+TGG - chr4_2:48065234-48065253 Msa0603490:intron 35.0%
TATGAATGTATGGTCGAAAC+AGG - chr4_2:48065664-48065683 Msa0603490:intron 35.0%
!! GGAGGATGCAATTTTTGATT+AGG + chr4_2:48065772-48065791 None:intergenic 35.0%
GGTGTAGTAATCAACATTTG+GGG + chr4_2:48065807-48065826 None:intergenic 35.0%
CATGGAAATGGAAATGGAAA+TGG + chr4_2:48065887-48065906 None:intergenic 35.0%
TGCACAGTATATGCAAAATG+TGG + chr4_2:48065933-48065952 None:intergenic 35.0%
GAATCATCATATACTAGTGC+CGG + chr4_2:48065971-48065990 None:intergenic 35.0%
!!! AACCACCCACCTTTATTTTT+TGG + chr4_2:48066045-48066064 None:intergenic 35.0%
AGTAGCCAAAACAAATCCAG+GGG + chr4_2:48061447-48061466 None:intergenic 40.0%
GAAGTAGCCAAAACAAATCC+AGG + chr4_2:48061449-48061468 None:intergenic 40.0%
!!! GTTTTGGCTACTTCACAACA+TGG - chr4_2:48061455-48061474 Msa0603490:three_prime_UTR 40.0%
!! CGGTAACAATGCTTTTTGTG+TGG + chr4_2:48061685-48061704 None:intergenic 40.0%
CTCGAATTGTTGTACGAGAA+GGG - chr4_2:48061726-48061745 Msa0603490:CDS 40.0%
TCGAATTGTTGTACGAGAAG+GGG - chr4_2:48061727-48061746 Msa0603490:CDS 40.0%
! AGGGGACAGATTATTGGTTA+AGG - chr4_2:48061745-48061764 Msa0603490:CDS 40.0%
CAATGCAGGCTGATATTGTT+TGG + chr4_2:48061785-48061804 None:intergenic 40.0%
CAAACAATATCAGCCTGCAT+TGG - chr4_2:48061783-48061802 Msa0603490:CDS 40.0%
GTGTGTGAGAGTAAAACTCA+TGG + chr4_2:48061953-48061972 None:intergenic 40.0%
TATATTGTAGAGGACCGCTA+AGG - chr4_2:48061993-48062012 Msa0603490:intron 40.0%
AAATCAGTGTTCCGATATGG+CGG + chr4_2:48062248-48062267 None:intergenic 40.0%
!!! GGAACACTGATTTTCTTGAG+TGG - chr4_2:48062255-48062274 Msa0603490:intron 40.0%
AAAAGATAGAGTGAGAACGG+TGG - chr4_2:48062319-48062338 Msa0603490:CDS 40.0%
AAAGATAGAGTGAGAACGGT+GGG - chr4_2:48062320-48062339 Msa0603490:CDS 40.0%
TTGAGTTCAGATGCAAACAC+AGG - chr4_2:48062466-48062485 Msa0603490:CDS 40.0%
TCCTCACAAGTGACAAATCT+GGG + chr4_2:48062527-48062546 None:intergenic 40.0%
TTCCTCACAAGTGACAAATC+TGG + chr4_2:48062528-48062547 None:intergenic 40.0%
AGGAATTGGAGAGTTGTTGA+TGG - chr4_2:48062543-48062562 Msa0603490:CDS 40.0%
! TGAATGGTTGTGTTGGTACT+TGG - chr4_2:48062610-48062629 Msa0603490:CDS 40.0%
! TAGATGAAGGTTTGGAGTGT+TGG - chr4_2:48062715-48062734 Msa0603490:CDS 40.0%
TTCATGTGGTTCAATGGAGA+TGG - chr4_2:48062747-48062766 Msa0603490:CDS 40.0%
GAAGTGGTCCAATCAAAAAG+CGG - chr4_2:48062952-48062971 Msa0603490:CDS 40.0%
AAGTGGTCCAATCAAAAAGC+GGG - chr4_2:48062953-48062972 Msa0603490:CDS 40.0%
!! GGGCATTGAGTTATGTATGA+TGG + chr4_2:48063172-48063191 None:intergenic 40.0%
ACTCAATGCCCAATTCAAAC+AGG - chr4_2:48063181-48063200 Msa0603490:CDS 40.0%
GTGTACAACTTCACCATTGT+TGG - chr4_2:48063214-48063233 Msa0603490:CDS 40.0%
TTCACCATTGTTGGACAAAG+AGG - chr4_2:48063223-48063242 Msa0603490:CDS 40.0%
AGTTCCTCTTTGTCCAACAA+TGG + chr4_2:48063230-48063249 None:intergenic 40.0%
TGGTTAAGAGCTACTGTCTA+TGG - chr4_2:48063274-48063293 Msa0603490:intron 40.0%
GGATAAGATTCATTGTGCCT+TGG + chr4_2:48063316-48063335 None:intergenic 40.0%
GACAAATATGCATAGGTGAG+TGG - chr4_2:48063553-48063572 Msa0603490:intron 40.0%
AAATATGCATAGGTGAGTGG+TGG - chr4_2:48063556-48063575 Msa0603490:intron 40.0%
GTGTAGGCATCAGAAACATT+TGG + chr4_2:48063633-48063652 None:intergenic 40.0%
TCTGATGCCTACACCATTAA+TGG - chr4_2:48063639-48063658 Msa0603490:intron 40.0%
CTGATGCCTACACCATTAAT+GGG - chr4_2:48063640-48063659 Msa0603490:intron 40.0%
AGGAAACCCATTAATGGTGT+AGG + chr4_2:48063649-48063668 None:intergenic 40.0%
!! TACACCATTAATGGGTTTCC+TGG - chr4_2:48063648-48063667 Msa0603490:intron 40.0%
!! CCTTTGGAGCAATTGTAAAG+AGG + chr4_2:48063675-48063694 None:intergenic 40.0%
CCTCTTTACAATTGCTCCAA+AGG - chr4_2:48063672-48063691 Msa0603490:intron 40.0%
ACGTGCAGCTTGTATATAAC+TGG - chr4_2:48063698-48063717 Msa0603490:intron 40.0%
TACAAATTGAAGGTGAAGCC+AGG - chr4_2:48064275-48064294 Msa0603490:CDS 40.0%
! ATGATGGTATTGGACTCGAA+TGG + chr4_2:48064410-48064429 None:intergenic 40.0%
GAGTCCAATACCATCATACT+TGG - chr4_2:48064413-48064432 Msa0603490:intron 40.0%
TGGTCCAAGTATGATGGTAT+TGG + chr4_2:48064420-48064439 None:intergenic 40.0%
AATACCATCATACTTGGACC+AGG - chr4_2:48064419-48064438 Msa0603490:intron 40.0%
AGAACATTTGTGGTTTGACC+TGG + chr4_2:48064440-48064459 None:intergenic 40.0%
GCATGTAGAATGTGGCATTT+GGG + chr4_2:48064484-48064503 None:intergenic 40.0%
AGCATGTAGAATGTGGCATT+TGG + chr4_2:48064485-48064504 None:intergenic 40.0%
TCTAGCTAGCATGTAGAATG+TGG + chr4_2:48064492-48064511 None:intergenic 40.0%
CTAGCTAGACCATATTTCAC+AGG - chr4_2:48064503-48064522 Msa0603490:intron 40.0%
!!! CAAGTTTGGTTTTTTGGGCA+TGG + chr4_2:48064764-48064783 None:intergenic 40.0%
!! TGTTGGAGAAGTGCTATAGA+AGG + chr4_2:48064854-48064873 None:intergenic 40.0%
! ATTTTCCGGTTGTACCGTTA+AGG - chr4_2:48064909-48064928 Msa0603490:intron 40.0%
AGTCATCCTTTGCATCTTCA+TGG - chr4_2:48065058-48065077 Msa0603490:intron 40.0%
ATCTTGTTGATCCTGTTGAG+AGG - chr4_2:48065149-48065168 Msa0603490:intron 40.0%
ACAATCCAGGTGATTGACTA+TGG - chr4_2:48065224-48065243 Msa0603490:intron 40.0%
AACTAAGGTGCACATCAAAG+TGG + chr4_2:48065708-48065727 None:intergenic 40.0%
ACTTTGATGTGCACCTTAGT+TGG - chr4_2:48065707-48065726 Msa0603490:intron 40.0%
CTTTGATGTGCACCTTAGTT+GGG - chr4_2:48065708-48065727 Msa0603490:intron 40.0%
TTTGATGTGCACCTTAGTTG+GGG - chr4_2:48065709-48065728 Msa0603490:intron 40.0%
AAAATTGCATCCTCCTCCTA+AGG - chr4_2:48065777-48065796 Msa0603490:CDS 40.0%
GGAAAATTGGCAGAGTCAAT+TGG + chr4_2:48065828-48065847 None:intergenic 40.0%
GACCAAAAAATAAAGGTGGG+TGG - chr4_2:48066040-48066059 Msa0603490:CDS 40.0%
!! AACCTCCCCTGGATTTGTTT+TGG - chr4_2:48061439-48061458 Msa0603490:three_prime_UTR 45.0%
TCTGCAGATAAGGTTGGCAA+AGG - chr4_2:48061646-48061665 Msa0603490:three_prime_UTR 45.0%
TAAGGTTGGCAAAGGTTACG+AGG - chr4_2:48061654-48061673 Msa0603490:three_prime_UTR 45.0%
CCTTCTCGTACAACAATTCG+AGG + chr4_2:48061728-48061747 None:intergenic 45.0%
CCTCGAATTGTTGTACGAGA+AGG - chr4_2:48061725-48061744 Msa0603490:CDS 45.0%
ACGAGAAGGGGACAGATTAT+TGG - chr4_2:48061739-48061758 Msa0603490:CDS 45.0%
GTTAGAGTGACTGTCCTTAG+CGG + chr4_2:48062010-48062029 None:intergenic 45.0%
! ATTTTCTTCCTCTGCGCACA+AGG - chr4_2:48062157-48062176 Msa0603490:intron 45.0%
GGTGGGCATCTTCTCAAATA+TGG - chr4_2:48062337-48062356 Msa0603490:CDS 45.0%
TTGTCGTGTGACATTTGGTC+CGG + chr4_2:48062387-48062406 None:intergenic 45.0%
AACTCAGATCTGGAGAAGGA+TGG - chr4_2:48062433-48062452 Msa0603490:CDS 45.0%
CAAATCTGGGTGCAAAAGAG+AGG + chr4_2:48062514-48062533 None:intergenic 45.0%
! ACCCAGATTTGTCACTTGTG+AGG - chr4_2:48062523-48062542 Msa0603490:CDS 45.0%
! GTTGGTGCTTAGGTTTCATG+TGG - chr4_2:48062733-48062752 Msa0603490:CDS 45.0%
ATGGAGATGGAAGTTCACGA+TGG - chr4_2:48062760-48062779 Msa0603490:CDS 45.0%
TATGGTGTTTACGGGAGTGA+AGG - chr4_2:48062805-48062824 Msa0603490:CDS 45.0%
TTTACGGGAGTGAAGGATTG+AGG - chr4_2:48062812-48062831 Msa0603490:CDS 45.0%
GACTTAGAGATCCGGTAATC+CGG - chr4_2:48062907-48062926 Msa0603490:CDS 45.0%
TGAGACAACTTCGTAGTGGT+TGG - chr4_2:48063137-48063156 Msa0603490:CDS 45.0%
ACAACTTCGTAGTGGTTGGT+CGG - chr4_2:48063141-48063160 Msa0603490:CDS 45.0%
GACAAAGAGGAACTCTCTTC+TGG - chr4_2:48063236-48063255 Msa0603490:CDS 45.0%
TCTGGCATGCTCATTTCTCA+TGG - chr4_2:48063254-48063273 Msa0603490:intron 45.0%
ATTCATTGTGCCTTGGGAGA+AGG + chr4_2:48063309-48063328 None:intergenic 45.0%
AGAATGGGGACTTCCTTGTA+GGG + chr4_2:48063349-48063368 None:intergenic 45.0%
AAGGAAGTCCCCATTCTCTT+TGG - chr4_2:48063352-48063371 Msa0603490:intron 45.0%
GCTTGTGCAATTACAGCTTC+AGG + chr4_2:48063591-48063610 None:intergenic 45.0%
AGGTCCAGGAAACCCATTAA+TGG + chr4_2:48063655-48063674 None:intergenic 45.0%
GAGCAATTGTAAAGAGGTCC+AGG + chr4_2:48063669-48063688 None:intergenic 45.0%
AAGATGCATCTGCTTCGACA+AGG + chr4_2:48064379-48064398 None:intergenic 45.0%
TTGACCTGGTCCAAGTATGA+TGG + chr4_2:48064426-48064445 None:intergenic 45.0%
TAGACCATATTTCACAGGGC+AGG - chr4_2:48064508-48064527 Msa0603490:intron 45.0%
AGACCATATTTCACAGGGCA+GGG - chr4_2:48064509-48064528 Msa0603490:intron 45.0%
TTCGACAATTCCACAGTAGC+TGG - chr4_2:48064536-48064555 Msa0603490:intron 45.0%
!! GGCACATTTGCAGGGTATTT+TGG + chr4_2:48064692-48064711 None:intergenic 45.0%
!! TGGACTAGTTCCTAGTCCAA+CGG + chr4_2:48064744-48064763 None:intergenic 45.0%
!! ATGCTAGTATTGACCCTGCA+AGG - chr4_2:48065122-48065141 Msa0603490:intron 45.0%
GCAACAGTATTCCTCTCAAC+AGG + chr4_2:48065163-48065182 None:intergenic 45.0%
AATACTGTTGCTGTGCCTTC+TGG - chr4_2:48065172-48065191 Msa0603490:intron 45.0%
AATCACCTGGATTGTCAGCA+AGG + chr4_2:48065219-48065238 None:intergenic 45.0%
CAGAACCATAGTCAATCACC+TGG + chr4_2:48065232-48065251 None:intergenic 45.0%
GTATGGTCGAAACAGGTGTT+TGG - chr4_2:48065671-48065690 Msa0603490:intron 45.0%
TGCACCTTAGTTGGGGATTA+AGG - chr4_2:48065716-48065735 Msa0603490:intron 45.0%
CCATCCTTAATCCCCAACTA+AGG + chr4_2:48065723-48065742 None:intergenic 45.0%
CCTTAGTTGGGGATTAAGGA+TGG - chr4_2:48065720-48065739 Msa0603490:intron 45.0%
! AAGGATGGCTTGGATTGTTG+AGG - chr4_2:48065735-48065754 Msa0603490:intron 45.0%
! ATGGCTTGGATTGTTGAGGA+TGG - chr4_2:48065739-48065758 Msa0603490:CDS 45.0%
CAACATTTGGGGAGATCCTT+AGG + chr4_2:48065796-48065815 None:intergenic 45.0%
!! ATAAATAATTTATTATACTT+TGG - chr4_2:48063411-48063430 Msa0603490:intron 5.0%
!! TAAAATATTATTAATTAAAG+TGG + chr4_2:48064038-48064057 None:intergenic 5.0%
CAAATCCAGGGGAGGTTAAG+AGG + chr4_2:48061436-48061455 None:intergenic 50.0%
AGCCAAAACAAATCCAGGGG+AGG + chr4_2:48061444-48061463 None:intergenic 50.0%
TACCGTGAATGGGAAGTTCC+CGG - chr4_2:48061700-48061719 Msa0603490:three_prime_UTR 50.0%
GTACAACAATTCGAGGACCC+GGG + chr4_2:48061721-48061740 None:intergenic 50.0%
CGTACAACAATTCGAGGACC+CGG + chr4_2:48061722-48061741 None:intergenic 50.0%
CATTTGATATGCTTGGGCGC+CGG + chr4_2:48061915-48061934 None:intergenic 50.0%
AAACTTGCAACCGGCTGTGT+TGG - chr4_2:48062089-48062108 Msa0603490:intron 50.0%
TTGATGAACCTTGTGCGCAG+AGG + chr4_2:48062168-48062187 None:intergenic 50.0%
TGCAGATCTGACCACCATCT+TGG + chr4_2:48062217-48062236 None:intergenic 50.0%
AAAGTGATTGGATCCGTCGC+CGG - chr4_2:48062365-48062384 Msa0603490:CDS 50.0%
GATCTGGAGAAGGATGGAGA+AGG - chr4_2:48062439-48062458 Msa0603490:CDS 50.0%
CTGGGTGCAAAAGAGAGGTA+TGG + chr4_2:48062509-48062528 None:intergenic 50.0%
!! GGTTTGGAGTGTTGGTGCTT+AGG - chr4_2:48062723-48062742 Msa0603490:CDS 50.0%
GGGAGTGAAGGATTGAGGAA+GGG - chr4_2:48062817-48062836 Msa0603490:CDS 50.0%
GGAGTGAAGGATTGAGGAAG+GGG - chr4_2:48062818-48062837 Msa0603490:CDS 50.0%
AGCGACTGTTAAAGCAGCTG+TGG - chr4_2:48062984-48063003 Msa0603490:CDS 50.0%
GGTGTGAGACAACTTCGTAG+TGG - chr4_2:48063133-48063152 Msa0603490:CDS 50.0%
GAGAATGGGGACTTCCTTGT+AGG + chr4_2:48063350-48063369 None:intergenic 50.0%
ATTGCACAAGCTCTGCAGAC+AGG - chr4_2:48063600-48063619 Msa0603490:intron 50.0%
TTGCACAAGCTCTGCAGACA+GGG - chr4_2:48063601-48063620 Msa0603490:intron 50.0%
ACAAGCTGCACGTGTACCTT+TGG + chr4_2:48063691-48063710 None:intergenic 50.0%
GTACCCTGCCCTGTGAAATA+TGG + chr4_2:48064515-48064534 None:intergenic 50.0%
! TCATTGATGGCTGGAAGCAC+AGG + chr4_2:48064620-48064639 None:intergenic 50.0%
AACGGCCTTAACGGTACAAC+CGG + chr4_2:48064917-48064936 None:intergenic 50.0%
CGATACCTTGCTGACAATCC+AGG - chr4_2:48065211-48065230 Msa0603490:intron 50.0%
GTTGGGGATTAAGGATGGCT+TGG - chr4_2:48065725-48065744 Msa0603490:intron 50.0%
CATTTGGGGAGATCCTTAGG+AGG + chr4_2:48065793-48065812 None:intergenic 50.0%
TGCAGAGAGTGAAGTGTGTC+CGG - chr4_2:48065949-48065968 Msa0603490:intron 50.0%
AGGGGAGGTTAAGAGGAAGG+TGG + chr4_2:48061429-48061448 None:intergenic 55.0%
ACCTTCCTCTTAACCTCCCC+TGG - chr4_2:48061428-48061447 Msa0603490:three_prime_UTR 55.0%
TCCAGGGGAGGTTAAGAGGA+AGG + chr4_2:48061432-48061451 None:intergenic 55.0%
ACCGTGAATGGGAAGTTCCC+GGG - chr4_2:48061701-48061720 Msa0603490:three_prime_UTR 55.0%
ACCCGGGAACTTCCCATTCA+CGG + chr4_2:48061705-48061724 None:intergenic 55.0%
! GATGGTGGTCAGATCTGCAC+TGG - chr4_2:48062218-48062237 Msa0603490:intron 55.0%
TGTGACATTTGGTCCGGCGA+CGG + chr4_2:48062381-48062400 None:intergenic 55.0%
CGGGAGTGAAGGATTGAGGA+AGG - chr4_2:48062816-48062835 Msa0603490:CDS 55.0%
! CTTCGTAGTGGTTGGTCGGA+TGG - chr4_2:48063145-48063164 Msa0603490:CDS 55.0%
GACCTCTCATCCTTCTCCCA+AGG - chr4_2:48063296-48063315 Msa0603490:intron 55.0%
TGCCTTGGGAGAAGGATGAG+AGG + chr4_2:48063301-48063320 None:intergenic 55.0%
TGCACAAGCTCTGCAGACAG+GGG - chr4_2:48063602-48063621 Msa0603490:intron 55.0%
ACTGTTGCTGTGCCTTCTGG+TGG - chr4_2:48065175-48065194 Msa0603490:intron 55.0%
TTGCTGTGCCTTCTGGTGGT+TGG - chr4_2:48065179-48065198 Msa0603490:intron 55.0%
TGCTGTGCCTTCTGGTGGTT+GGG - chr4_2:48065180-48065199 Msa0603490:intron 55.0%
ATCGCAACCCAACCACCAGA+AGG + chr4_2:48065190-48065209 None:intergenic 55.0%
TTGGGGAGATCCTTAGGAGG+AGG + chr4_2:48065790-48065809 None:intergenic 55.0%
! GCACTGGTCTGCCGCCATAT+CGG - chr4_2:48062234-48062253 Msa0603490:intron 60.0%
GCACAAGCTCTGCAGACAGG+GGG - chr4_2:48063603-48063622 Msa0603490:intron 60.0%
CAAGCTCTGCAGACAGGGGG+TGG - chr4_2:48063606-48063625 Msa0603490:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 48061301 48066240 48061301 ID=Msa0603490;Name=Msa0603490
chr4_2 mRNA 48061301 48066240 48061301 ID=Msa0603490-mRNA-1;Parent=Msa0603490;Name=Msa0603490-mRNA-1;_AED=0.05;_eAED=0.05;_QI=58|1|1|1|1|1|6|424|587
chr4_2 exon 48061301 48061855 48061301 ID=Msa0603490-mRNA-1:exon:11033;Parent=Msa0603490-mRNA-1
chr4_2 exon 48062309 48063271 48062309 ID=Msa0603490-mRNA-1:exon:11032;Parent=Msa0603490-mRNA-1
chr4_2 exon 48063848 48063973 48063848 ID=Msa0603490-mRNA-1:exon:11031;Parent=Msa0603490-mRNA-1
chr4_2 exon 48064168 48064412 48064168 ID=Msa0603490-mRNA-1:exon:11030;Parent=Msa0603490-mRNA-1
chr4_2 exon 48065737 48065888 48065737 ID=Msa0603490-mRNA-1:exon:11029;Parent=Msa0603490-mRNA-1
chr4_2 exon 48066036 48066240 48066036 ID=Msa0603490-mRNA-1:exon:11028;Parent=Msa0603490-mRNA-1
chr4_2 five_prime_UTR 48066183 48066240 48066183 ID=Msa0603490-mRNA-1:five_prime_utr;Parent=Msa0603490-mRNA-1
chr4_2 CDS 48066036 48066182 48066036 ID=Msa0603490-mRNA-1:cds;Parent=Msa0603490-mRNA-1
chr4_2 CDS 48065737 48065888 48065737 ID=Msa0603490-mRNA-1:cds;Parent=Msa0603490-mRNA-1
chr4_2 CDS 48064168 48064412 48064168 ID=Msa0603490-mRNA-1:cds;Parent=Msa0603490-mRNA-1
chr4_2 CDS 48063848 48063973 48063848 ID=Msa0603490-mRNA-1:cds;Parent=Msa0603490-mRNA-1
chr4_2 CDS 48062309 48063271 48062309 ID=Msa0603490-mRNA-1:cds;Parent=Msa0603490-mRNA-1
chr4_2 CDS 48061725 48061855 48061725 ID=Msa0603490-mRNA-1:cds;Parent=Msa0603490-mRNA-1
chr4_2 three_prime_UTR 48061301 48061724 48061301 ID=Msa0603490-mRNA-1:three_prime_utr;Parent=Msa0603490-mRNA-1
Gene Sequence

>Msa0603490

ATGCATATCAAAATGATTGTCACTGTTCCATTATCAAAGGCTCTTTTTGCAGCTTTTCTCTTTGTCACCACCTTCCTCTTAACCTCCCCTGGATTTGTTTTGGCTACTTCACAACATGGAAGTGTTACAAGACACTACAAATTTGATATAAGGTTGGCAAAGGTTACGAGGCTGTGCCACACAAAAAGCATTGTTACCGTGAATGGGAAGTTCCCGGGTCCTCGAATTGTTGTACGAGAAGGGGACAGATTATTGGTTAAGGTTGTTAATCATGTTCCAAACAATATCAGCCTGCATTGGCATGGTGTGAGACAACTTCGTAGTGGTTGGTCGGATGGTCCATCATACATAACTCAATGCCCAATTCAAACAGGTCAGAGTTATGTGTACAACTTCACCATTGTTGGACAAAGAGGAACTCTCTTCTGGCATGCTCATTTCTCATGGTTAAGAGCTACTGTCTATGGACCTCTCATCCTTCTCCCAAGGCACAATGAATCTTATCCTTTTCAAAAACCCTACAAGGAAGTCCCCATTCTCTTTGGTGAGTGGTGGAATGCAGATCCTGAAGCTGTAATTGCACAAGCTCTGCAGACAGGGGGTGGCCCAAATGTTTCTGATGCCTACACCATTAATGGGTTTCCTGGACCTCTTTACAATTGCTCCAAAGATACATACAAATTGAAGGTGAAGCCAGGAAAAACATATCTATTACGTTTGATCAACGCTGCACTCAACGACGAACTCTTTTTCAGCATTGCTAATCACACATTAATCCTTGTCGAAGCAGATGCATCTTACATTAAACCATTCGAGTCCAATACCATCATACTTGGACCAGGTCAAACCACAAATGTTCTATTAAAAACTAAACCAAATTACCCAAATGCCACATTCTACATGCTAGCTAGACCATATTTCACAGGGCAGGGTACTTTCGACAATTCCACAGTAGCTGGAATTTTAGAATACACTAAACCAAATGATCAAACAAATAAAAATCTCCATATTCTAAAACCTGTGCTTCCAGCCATCAATGATACTAATTTTGTTGCTAATTTTAGTAACAAATTTCTTAGCTTAAATAGTCCAAAATACCCTGCAAATGTGCCTAAAACTATTGACAAAAACTTTTTCTTTACCGTTGGACTAGGAACTAGTCCATGCCCAAAAAACCAAACTTGTCAAGGACCAAATAATAGTTCAAATTCAAAATTTGCAGCTTCAATGAACAATGTATCATTTGCTTTACCTTCTATAGCACTTCTCCAACAACATTTCTTTGGAACTAATAATGGTTTTACAACGGATTTTCCGGTTGTACCGTTAAGGCCGTTTAACTATACAGGAACTCCTCCAAACAATACTTTGGTTAGTAATGGTACAAAGACAGTGGTGATACCATATAACACTAGAGTTCAGGTTATATTGCAGGATACAAGCATTTTGGGAGCTGAGAGTCATCCTTTGCATCTTCATGGATTTAATTTCTTTGTTGTTGGTCAAGGTTTTGGAAATTTTAATGCTAGTATTGACCCTGCAAGGTTTAATCTTGTTGATCCTGTTGAGAGGAATACTGTTGCTGTGCCTTCTGGTGGTTGGGTTGCGATACGATACCTTGCTGACAATCCAGGTGTTTGGCTGATGCATTGCCACTTTGATGTGCACCTTAGTTGGGGATTAAGGATGGCTTGGATTGTTGAGGATGGAAAGTTACCTAATCAAAAATTGCATCCTCCTCCTAAGGATCTCCCCAAATGTTGA
Protein sequence

>Msa0603490

MHIKMIVTVPLSKALFAAFLFVTTFLLTSPGFVLATSQHGSVTRHYKFDIRLAKVTRLCHTKSIVTVNGKFPGPRIVVREGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHFSWLRATVYGPLILLPRHNESYPFQKPYKEVPILFGEWWNADPEAVIAQALQTGGGPNVSDAYTINGFPGPLYNCSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLILVEADASYIKPFESNTIILGPGQTTNVLLKTKPNYPNATFYMLARPYFTGQGTFDNSTVAGILEYTKPNDQTNKNLHILKPVLPAINDTNFVANFSNKFLSLNSPKYPANVPKTIDKNFFFTVGLGTSPCPKNQTCQGPNNSSNSKFAASMNNVSFALPSIALLQQHFFGTNNGFTTDFPVVPLRPFNYTGTPPNNTLVSNGTKTVVIPYNTRVQVILQDTSILGAESHPLHLHGFNFFVVGQGFGNFNASIDPARFNLVDPVERNTVAVPSGGWVAIRYLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKLPNQKLHPPPKDLPKC*