Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0613170 | XP_039690771.1 | 95.695 | 511 | 11 | 1 | 4 | 503 | 2 | 512 | 0.0 | 1008 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0613170 | sp|Q9SQT8|DHQSD_ARATH | 69.844 | 514 | 141 | 3 | 3 | 503 | 91 | 603 | 0.0 | 701 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0613170 | I3T8Z3 | 95.136 | 514 | 11 | 2 | 4 | 503 | 2 | 515 | 0.0 | 1002 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0613170 | Msa0777460 | 0.827306 | 1.682889e-54 | -8.615850e-47 |
| Msa0242260 | Msa0613170 | 0.809348 | 1.977765e-50 | -8.615850e-47 |
| Msa0280470 | Msa0613170 | 0.800875 | 1.173898e-48 | -8.615850e-47 |
| Msa0304310 | Msa0613170 | 0.802268 | 6.081733e-49 | -8.615850e-47 |
| Msa0319690 | Msa0613170 | 0.817359 | 3.436179e-52 | -8.615850e-47 |
| Msa0494620 | Msa0613170 | 0.803061 | 4.171774e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0613170 | MtrunA17_Chr1g0170521 | 95.136 | 514 | 11 | 2 | 4 | 503 | 2 | 515 | 0.0 | 1002 |
| Msa0613170 | MtrunA17_Chr4g0048091 | 92.368 | 511 | 13 | 2 | 4 | 503 | 2 | 497 | 0.0 | 933 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0613170 | AT3G06350.1 | 69.844 | 514 | 141 | 3 | 3 | 503 | 91 | 603 | 0.0 | 701 |
Find 158 sgRNAs with CRISPR-Local
Find 443 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCGTTCTTGTTCACTTAC+AGG | 0.158590 | 4_2:-61812562 | Msa0613170:intron |
| CGTATACTTTGTGCAAAATT+TGG | 0.173415 | 4_2:-61811067 | Msa0613170:CDS |
| GTTATTGGGGCCGGTGGTGC+TGG | 0.178808 | 4_2:-61809120 | Msa0613170:CDS |
| GTTAATCTGCGTCCCTATAA+TGG | 0.202016 | 4_2:-61812726 | Msa0613170:CDS |
| GGTAAGCTGTTTGTTGTTAT+TGG | 0.204026 | 4_2:-61809135 | Msa0613170:CDS |
| GTAAGCTGTTTGTTGTTATT+GGG | 0.209152 | 4_2:-61809134 | Msa0613170:CDS |
| GGACCTGATACAAAAGTATA+TGG | 0.246424 | 4_2:-61810944 | Msa0613170:CDS |
| ACAGGACTGGAGATGTTTAT+TGG | 0.265366 | 4_2:-61807506 | Msa0613170:CDS |
| TCCATTCATTGGACTTGTTA+TGG | 0.267088 | 4_2:-61811110 | Msa0613170:CDS |
| GAAGGCTTCATTGAACAATA+TGG | 0.271186 | 4_2:+61810886 | None:intergenic |
| CTGCTCGCCATCCTACTTCT+AGG | 0.274000 | 4_2:+61806419 | None:intergenic |
| AAATTCACATCCGTTGAATT+TGG | 0.274772 | 4_2:-61812987 | Msa0613170:five_prime_UTR |
| GGCGCGGATGTTTCAAATTA+TGG | 0.276023 | 4_2:-61811725 | Msa0613170:CDS |
| AGAACTCTTCAGAAATATTA+TGG | 0.285586 | 4_2:-61807286 | Msa0613170:CDS |
| CCATGGTTTCGCCCATTATA+GGG | 0.298605 | 4_2:+61812714 | None:intergenic |
| TGCGACTTGCTTTGTGGTGA+TGG | 0.315038 | 4_2:+61812948 | None:intergenic |
| ATCAAAACCAATTGTCTTGA+AGG | 0.319919 | 4_2:+61810868 | None:intergenic |
| TTTGGTGGGTATCTTACTTT+TGG | 0.321545 | 4_2:-61811049 | Msa0613170:intron |
| TCCATGGTTTCGCCCATTAT+AGG | 0.329672 | 4_2:+61812713 | None:intergenic |
| AAATTCCAGGTTCCATTCAT+TGG | 0.330251 | 4_2:-61811121 | Msa0613170:intron |
| ACAGGTGTTTCATCAACTTT+TGG | 0.331032 | 4_2:+61808361 | None:intergenic |
| ATATTTCTGAAGAGTTCTTT+TGG | 0.340525 | 4_2:+61807291 | None:intergenic |
| GCTGGGAAGGCACTTGCTTA+TGG | 0.344432 | 4_2:-61809102 | Msa0613170:CDS |
| TTACATTGACGTTGAACTTA+AGG | 0.345605 | 4_2:-61812339 | Msa0613170:intron |
| CCATTCATTGGACTTGTTAT+GGG | 0.346230 | 4_2:-61811109 | Msa0613170:CDS |
| ATACATACCACCTTCCCATT+TGG | 0.360797 | 4_2:+61812421 | None:intergenic |
| TACATACCACCTTCCCATTT+GGG | 0.362013 | 4_2:+61812422 | None:intergenic |
| CGACAATATGAGCATTATAC+TGG | 0.370012 | 4_2:-61807473 | Msa0613170:CDS |
| TTGAAAGAAGCAGAAGAATC+TGG | 0.381681 | 4_2:-61807542 | Msa0613170:CDS |
| TTAATCTGCGTCCCTATAAT+GGG | 0.387976 | 4_2:-61812725 | Msa0613170:CDS |
| AATGAAGCCTTCAAGACAAT+TGG | 0.388263 | 4_2:-61810875 | Msa0613170:CDS |
| TTATTGGGGCCGGTGGTGCT+GGG | 0.401637 | 4_2:-61809119 | Msa0613170:CDS |
| GCGACTTGCTTTGTGGTGAT+GGG | 0.405394 | 4_2:+61812949 | None:intergenic |
| CAACCTCGTCACAACACTTA+AGG | 0.412513 | 4_2:+61809527 | None:intergenic |
| ACAAAAGTATATGGGATTGT+TGG | 0.413162 | 4_2:-61810935 | Msa0613170:CDS |
| TCTGGAGCCACTATTGTAAC+AGG | 0.414913 | 4_2:-61807524 | Msa0613170:CDS |
| GTTGCAAGAATACAAGCAAC+TGG | 0.416406 | 4_2:-61811796 | Msa0613170:CDS |
| TCCGGCGAAGTCCGAGGAAG+AGG | 0.418419 | 4_2:-61813109 | Msa0613170:five_prime_UTR |
| CGCCGGAACCTGCTGTTACT+AGG | 0.419402 | 4_2:+61813125 | None:intergenic |
| GCTATTTCTGCTATTGAGGA+TGG | 0.424228 | 4_2:-61809303 | Msa0613170:CDS |
| GAATTGGTTACACAGTCAAT+AGG | 0.430150 | 4_2:-61809396 | Msa0613170:intron |
| AACCTCGTCACAACACTTAA+GGG | 0.433794 | 4_2:+61809528 | None:intergenic |
| CTATACAATTTCAGACAACT+TGG | 0.439985 | 4_2:-61810965 | Msa0613170:CDS |
| TCCTCTTCCTCGGACTTCGC+CGG | 0.440496 | 4_2:+61813108 | None:intergenic |
| TAGCCACGTACAACATTTCG+TGG | 0.444029 | 4_2:-61813284 | Msa0613170:five_prime_UTR |
| AAGTAGCATACCTTTGAAAC+AGG | 0.445142 | 4_2:+61808343 | None:intergenic |
| TGGGGCCGGTGGTGCTGGGA+AGG | 0.445473 | 4_2:-61809115 | Msa0613170:CDS |
| CCAACAGATGGGAAGTTGAT+TGG | 0.446923 | 4_2:-61809348 | Msa0613170:CDS |
| AAGGCTTCATTGAACAATAT+GGG | 0.447559 | 4_2:+61810887 | None:intergenic |
| TTGGACTTGTTATGGGCGAC+AGG | 0.448844 | 4_2:-61811102 | Msa0613170:CDS |
| AATTTACTTTCACATTAGTC+AGG | 0.452661 | 4_2:+61813005 | None:intergenic |
| ATCAACGCTTGGATGCATTA+CGG | 0.453875 | 4_2:-61812385 | Msa0613170:CDS |
| TGGTGCTATTTCTGCTATTG+AGG | 0.455359 | 4_2:-61809307 | Msa0613170:CDS |
| TTGGATTGCGACTTGCTTTG+TGG | 0.463229 | 4_2:+61812942 | None:intergenic |
| GATTACATCAGCAAGTTCTC+TGG | 0.463591 | 4_2:+61808474 | None:intergenic |
| TAGTTACCGGTGGTAGGTGC+TGG | 0.466310 | 4_2:+61812870 | None:intergenic |
| TTCCTAGTAACAGCAGGTTC+CGG | 0.466520 | 4_2:-61813127 | Msa0613170:five_prime_UTR |
| CAAAGAAATGAAAGAGTGGT+TGG | 0.466882 | 4_2:+61812923 | None:intergenic |
| ACTCCGTCAGTTGAGGATCT+TGG | 0.471896 | 4_2:-61811826 | Msa0613170:CDS |
| CTAGCAAACACAACTTCAAT+CGG | 0.472513 | 4_2:-61808391 | Msa0613170:CDS |
| CACTCACTCTCGCACCTTCA+CGG | 0.473210 | 4_2:-61813168 | Msa0613170:five_prime_UTR |
| GACTCATGCTTCGTGGGAAT+AGG | 0.479159 | 4_2:+61813399 | None:intergenic |
| GAGCATTATACTGGATTGCC+AGG | 0.481705 | 4_2:-61807464 | Msa0613170:intron |
| TTTCGTTGACTCATGCTTCG+TGG | 0.481725 | 4_2:+61813392 | None:intergenic |
| ACAAACAGCTTACCAGCTAA+TGG | 0.488251 | 4_2:+61809144 | None:intergenic |
| CTCCAGTCCTGTTACAATAG+TGG | 0.488995 | 4_2:+61807517 | None:intergenic |
| TGTTCACTTCTCCTCTTCCT+CGG | 0.489593 | 4_2:+61813098 | None:intergenic |
| TCCAGGTCAACCTACACTTA+AGG | 0.491107 | 4_2:-61810999 | Msa0613170:intron |
| TTCGTTGACTCATGCTTCGT+GGG | 0.491836 | 4_2:+61813393 | None:intergenic |
| CTGTTTGTTGTTATTGGGGC+CGG | 0.492358 | 4_2:-61809129 | Msa0613170:CDS |
| CTATTTCTGCTATTGAGGAT+GGG | 0.499559 | 4_2:-61809302 | Msa0613170:CDS |
| GTGATTGCAAACCGCACCTA+TGG | 0.499726 | 4_2:-61809054 | Msa0613170:intron |
| GCTAGAATCATACCATCCTC+TGG | 0.504787 | 4_2:+61808409 | None:intergenic |
| TACTTTGTGCAAAATTTGGT+GGG | 0.508343 | 4_2:-61811063 | Msa0613170:CDS |
| AGAGAACTTGCTGATGTAAT+CGG | 0.508494 | 4_2:-61808472 | Msa0613170:CDS |
| CAGCGTTACCATTCCTCACA+AGG | 0.511040 | 4_2:-61809557 | Msa0613170:CDS |
| GTGAGTGAGATCGGATGCGA+TGG | 0.514909 | 4_2:+61813184 | None:intergenic |
| GACCTGATACAAAAGTATAT+GGG | 0.520334 | 4_2:-61810943 | Msa0613170:CDS |
| AAGTGCCTTCCCAGCACCAC+CGG | 0.523362 | 4_2:+61809110 | None:intergenic |
| CGAGGTTGATCCAGTGGCTA+AGG | 0.524038 | 4_2:-61809512 | Msa0613170:intron |
| TGATGAAACACCTGTTTCAA+AGG | 0.525212 | 4_2:-61808353 | Msa0613170:intron |
| GGCTGCCTCCTTGTGAGGAA+TGG | 0.525797 | 4_2:+61809549 | None:intergenic |
| CCCTATAATGGGCGAAACCA+TGG | 0.526376 | 4_2:-61812714 | Msa0613170:CDS |
| GATAATTACCATCCAGAGGA+TGG | 0.527848 | 4_2:-61808421 | Msa0613170:CDS |
| ACAGCTGTTTCACCATTAGC+TGG | 0.529513 | 4_2:-61809156 | Msa0613170:CDS |
| GTAATCAGCTTCTAATTCCA+TGG | 0.529914 | 4_2:+61812358 | None:intergenic |
| GCAGGTAAACATAATGATAG+TGG | 0.530409 | 4_2:-61809180 | Msa0613170:intron |
| CCCATAACAAGTCCAATGAA+TGG | 0.531677 | 4_2:+61811109 | None:intergenic |
| AACTTCAAGGTTGTAAACGC+TGG | 0.532166 | 4_2:-61806374 | Msa0613170:three_prime_UTR |
| ATACTTTGTGCAAAATTTGG+TGG | 0.532307 | 4_2:-61811064 | Msa0613170:CDS |
| GGCTATAACACAGATTATGT+TGG | 0.533071 | 4_2:-61809327 | Msa0613170:CDS |
| TGGGAAGGTGGTATGTATGA+TGG | 0.533285 | 4_2:-61812416 | Msa0613170:CDS |
| GGTGATTTACTGTGACTGAC+AGG | 0.533856 | 4_2:+61810908 | None:intergenic |
| CGACTTGCTTTGTGGTGATG+GGG | 0.534427 | 4_2:+61812950 | None:intergenic |
| TAACCAAATACCTTAGCCAC+TGG | 0.534581 | 4_2:+61809502 | None:intergenic |
| GCTTATGGTGCAAAAGAGAA+AGG | 0.544146 | 4_2:-61809087 | Msa0613170:CDS |
| AGTTCAAAGAAATGAAAGAG+TGG | 0.555070 | 4_2:+61812919 | None:intergenic |
| TGGACTTGTTATGGGCGACA+GGG | 0.557078 | 4_2:-61811101 | Msa0613170:CDS |
| CCAATCAACTTCCCATCTGT+TGG | 0.559134 | 4_2:+61809348 | None:intergenic |
| ATTATGGAAAACTATTGATG+AGG | 0.560071 | 4_2:-61807270 | Msa0613170:intron |
| AGCCACTATTGTAACAGGAC+TGG | 0.563539 | 4_2:-61807519 | Msa0613170:CDS |
| TGAGTGAGATCGGATGCGAT+GGG | 0.568508 | 4_2:+61813185 | None:intergenic |
| CTTAGGCCCAAATGGGAAGG+TGG | 0.569446 | 4_2:-61812428 | Msa0613170:intron |
| TTTCTTAGGCCCAAATGGGA+AGG | 0.578981 | 4_2:-61812431 | Msa0613170:intron |
| GTGAGATGAAACAATGACCT+TGG | 0.579371 | 4_2:+61811861 | None:intergenic |
| GGATGCATTACGGTTAGCCA+TGG | 0.582710 | 4_2:-61812375 | Msa0613170:CDS |
| GAATCATACCATCCTCTGGA+TGG | 0.586059 | 4_2:+61808413 | None:intergenic |
| GAAAGTGTTAAGATCTTGAG+AGG | 0.586604 | 4_2:+61812604 | None:intergenic |
| GTCTACTGAACTCGCCGTGA+AGG | 0.587005 | 4_2:+61813154 | None:intergenic |
| GGTGCGAGAGTGAGTGAGAT+CGG | 0.587336 | 4_2:+61813175 | None:intergenic |
| TTAAGGGCTGCCTCCTTGTG+AGG | 0.596708 | 4_2:+61809544 | None:intergenic |
| ACGCCGTTCCTAGTAACAGC+AGG | 0.602694 | 4_2:-61813133 | Msa0613170:five_prime_UTR |
| TCAGCAAACTCCGTCAGTTG+AGG | 0.606208 | 4_2:-61811833 | Msa0613170:CDS |
| TAAGCTGTTTGTTGTTATTG+GGG | 0.607370 | 4_2:-61809133 | Msa0613170:CDS |
| TTGCAAGAATACAAGCAACT+GGG | 0.609562 | 4_2:-61811795 | Msa0613170:CDS |
| ACAATACAATACAAATTACA+AGG | 0.610306 | 4_2:+61806268 | None:intergenic |
| AAAGATTGCAACGACTGCCG+TGG | 0.610819 | 4_2:-61811761 | Msa0613170:CDS |
| TGCATCTTAATCCTAGAAGT+AGG | 0.614003 | 4_2:-61806430 | Msa0613170:three_prime_UTR |
| TTGTAAGAAGACCAACAGAT+GGG | 0.614700 | 4_2:-61809359 | Msa0613170:CDS |
| GCAGGTTCCGGCGAAGTCCG+AGG | 0.617211 | 4_2:-61813115 | Msa0613170:five_prime_UTR |
| TTGCCAAGATCCTCAACTGA+CGG | 0.617998 | 4_2:+61811823 | None:intergenic |
| TGGTGATGAAAATCAACGCT+TGG | 0.618151 | 4_2:-61812396 | Msa0613170:CDS |
| AAAGTGTTAAGATCTTGAGA+GGG | 0.619192 | 4_2:+61812605 | None:intergenic |
| TCTTAATCCTAGAAGTAGGA+TGG | 0.620704 | 4_2:-61806426 | Msa0613170:three_prime_UTR |
| GTAATTATCTAAATCACTGA+GGG | 0.622651 | 4_2:+61808435 | None:intergenic |
| GTTAGTTAGTTACCGGTGGT+AGG | 0.623272 | 4_2:+61812864 | None:intergenic |
| TGACGGAAAACATGGGTGGG+TGG | 0.628000 | 4_2:+61813353 | None:intergenic |
| AAGCAGCCAGCACCTACCAC+CGG | 0.628164 | 4_2:-61812876 | Msa0613170:intron |
| GGACTTGTTATGGGCGACAG+GGG | 0.630222 | 4_2:-61811100 | Msa0613170:CDS |
| AACCTGTAAGTGAACAAGAA+CGG | 0.632558 | 4_2:+61812560 | None:intergenic |
| TTTGTTGTTATTGGGGCCGG+TGG | 0.632690 | 4_2:-61809126 | Msa0613170:CDS |
| TTTAGATAATTACCATCCAG+AGG | 0.639923 | 4_2:-61808425 | Msa0613170:CDS |
| GAACTTGCTGATGTAATCGG+TGG | 0.640214 | 4_2:-61808469 | Msa0613170:CDS |
| AGCCCTTAAGTGTTGTGACG+AGG | 0.641813 | 4_2:-61809530 | Msa0613170:CDS |
| GACTTGCTTTGTGGTGATGG+GGG | 0.644452 | 4_2:+61812951 | None:intergenic |
| GTGAGTGGGACCAAATTCAA+CGG | 0.645593 | 4_2:+61812977 | None:intergenic |
| AAGTGTTAAGATCTTGAGAG+GGG | 0.646005 | 4_2:+61812606 | None:intergenic |
| TGCAACAGATCCTTAAGTGT+AGG | 0.648739 | 4_2:+61810989 | None:intergenic |
| CAGTTCTACGACTCTATACG+CGG | 0.649595 | 4_2:-61811901 | Msa0613170:CDS |
| AGTTGGTTAGATGCATCGAA+TGG | 0.650536 | 4_2:-61813038 | Msa0613170:five_prime_UTR |
| GTTGTAAGAAGACCAACAGA+TGG | 0.654788 | 4_2:-61809360 | Msa0613170:CDS |
| AATGAAGCTTACCATAGGTG+CGG | 0.656843 | 4_2:+61809043 | None:intergenic |
| GAACCTGCTGTTACTAGGAA+CGG | 0.657554 | 4_2:+61813130 | None:intergenic |
| TTGCATGTGTGACAACTCAA+CGG | 0.665287 | 4_2:-61806142 | None:intergenic |
| GAGTGAGATCGGATGCGATG+GGG | 0.666272 | 4_2:+61813186 | None:intergenic |
| TTGTGACGAGGTTGATCCAG+TGG | 0.677946 | 4_2:-61809518 | Msa0613170:CDS |
| TGCCGTGGAGATCACTGATG+TGG | 0.678999 | 4_2:-61811746 | Msa0613170:CDS |
| GTGCAAAAGAGAAAGGAGCA+AGG | 0.686151 | 4_2:-61809080 | Msa0613170:CDS |
| GGTAATTATCTAAATCACTG+AGG | 0.690501 | 4_2:+61808434 | None:intergenic |
| TGCAAGAATACAAGCAACTG+GGG | 0.691736 | 4_2:-61811794 | Msa0613170:CDS |
| TGGAGATCACTGATGTGGCG+CGG | 0.694129 | 4_2:-61811741 | Msa0613170:CDS |
| AAACCACGAAATGTTGTACG+TGG | 0.698379 | 4_2:+61813281 | None:intergenic |
| GCTATTGAGGATGGGCTACG+AGG | 0.705976 | 4_2:-61809294 | Msa0613170:intron |
| AGTTCTACGACTCTATACGC+GGG | 0.712418 | 4_2:-61811900 | Msa0613170:CDS |
| CGCCACATCAGTGATCTCCA+CGG | 0.712453 | 4_2:+61811744 | None:intergenic |
| GAAGACATACAATAAAACCA+AGG | 0.716769 | 4_2:-61811878 | Msa0613170:CDS |
| CGTTACCATTCCTCACAAGG+AGG | 0.724770 | 4_2:-61809554 | Msa0613170:CDS |
| AATCTAATCGAATTTCGACA+AGG | 0.737741 | 4_2:+61812645 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCATAAAATAAATATG+AGG | + | chr4_2:61806481-61806500 | None:intergenic | 10.0% |
| !!! | AAACACTTTTATTAAAAAAT+AGG | - | chr4_2:61809323-61809342 | Msa0613170:CDS | 10.0% |
| !! | TATATAATAGTAAATTGAAA+AGG | + | chr4_2:61812868-61812887 | None:intergenic | 10.0% |
| !!! | TTCTTTAAAATGTTTTTTGA+CGG | + | chr4_2:61806215-61806234 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTTAGTAAGCTA+TGG | - | chr4_2:61806786-61806805 | Msa0613170:intron | 15.0% |
| !!! | AAAATGTTTTACATTTTCTT+AGG | - | chr4_2:61807103-61807122 | Msa0613170:intron | 15.0% |
| !!! | TAATGAATATGTTATTTGAT+TGG | + | chr4_2:61807246-61807265 | None:intergenic | 15.0% |
| !!! | AATTTTAACATAACTATTGT+TGG | - | chr4_2:61808404-61808423 | Msa0613170:CDS | 15.0% |
| !!! | GAATTATGTATTCTAATTTT+TGG | - | chr4_2:61808809-61808828 | Msa0613170:intron | 15.0% |
| !! | AAATTACTAGGAAAAAAAAA+AGG | + | chr4_2:61809110-61809129 | None:intergenic | 15.0% |
| !!! | TTTTTTTCCTAGTAATTTTA+TGG | - | chr4_2:61809112-61809131 | Msa0613170:CDS | 15.0% |
| !!! | TTTTAGATTTGAATTTTGAT+TGG | + | chr4_2:61809381-61809400 | None:intergenic | 15.0% |
| !!! | ATCCTTTTTTTTTAAAAACT+CGG | + | chr4_2:61809416-61809435 | None:intergenic | 15.0% |
| !! | ATATCATATATATAACTGTT+AGG | + | chr4_2:61809581-61809600 | None:intergenic | 15.0% |
| !!! | CTTTTAATTTATTAAATGGA+TGG | - | chr4_2:61810636-61810655 | Msa0613170:intron | 15.0% |
| !!! | TATGTAAGAATATTTTATAG+TGG | - | chr4_2:61811529-61811548 | Msa0613170:intron | 15.0% |
| !!! | TGTCAAATATTGTTTTTATT+AGG | - | chr4_2:61811847-61811866 | Msa0613170:CDS | 15.0% |
| !!! | GTCAAATATTGTTTTTATTA+GGG | - | chr4_2:61811848-61811867 | Msa0613170:CDS | 15.0% |
| !!! | AGCAAGTATATATTTTTTTA+AGG | - | chr4_2:61812598-61812617 | Msa0613170:CDS | 15.0% |
| !!! | CAATTTTTTATACAAACTAT+TGG | - | chr4_2:61812739-61812758 | Msa0613170:CDS | 15.0% |
| !! | ATGAACAAAAAATAAATCAG+TGG | + | chr4_2:61806322-61806341 | None:intergenic | 20.0% |
| !! | ATGAAAAAAATCTGAATAGT+TGG | - | chr4_2:61806493-61806512 | Msa0613170:intron | 20.0% |
| !! | ATACAAAAAGCTAAACTTAA+TGG | - | chr4_2:61806874-61806893 | Msa0613170:intron | 20.0% |
| !! | AAAATATTGCATGATCATAA+TGG | - | chr4_2:61807965-61807984 | Msa0613170:intron | 20.0% |
| !!! | CAGATTTTTATTTGACATAA+CGG | + | chr4_2:61808209-61808228 | None:intergenic | 20.0% |
| !!! | TGGAGTTTATGTATTTTTAT+TGG | - | chr4_2:61808702-61808721 | Msa0613170:intron | 20.0% |
| !!! | AGTTTATGTATTTTTATTGG+TGG | - | chr4_2:61808705-61808724 | Msa0613170:intron | 20.0% |
| !! | TAATTCAAACAATCTTCATA+AGG | + | chr4_2:61808795-61808814 | None:intergenic | 20.0% |
| !!! | TTATGCTACAAATCTTATTT+GGG | - | chr4_2:61808908-61808927 | Msa0613170:intron | 20.0% |
| !! | TTCACAATATTTCAAAACAT+AGG | - | chr4_2:61809039-61809058 | Msa0613170:intron | 20.0% |
| !! | AAACTAACCATAAAATTACT+AGG | + | chr4_2:61809122-61809141 | None:intergenic | 20.0% |
| !!! | ATCCGAGTTTTTAAAAAAAA+AGG | - | chr4_2:61809411-61809430 | Msa0613170:intron | 20.0% |
| !! | TGATATCGCTATAATTTATT+TGG | - | chr4_2:61809595-61809614 | Msa0613170:intron | 20.0% |
| !! | AAATTTATACTTACTGTTGT+AGG | - | chr4_2:61810300-61810319 | Msa0613170:intron | 20.0% |
| !! | TCTTAAATAAGAAAAGGTTT+CGG | - | chr4_2:61810815-61810834 | Msa0613170:CDS | 20.0% |
| !! | TGCTTACAGATTAAATTATA+TGG | - | chr4_2:61811555-61811574 | Msa0613170:intron | 20.0% |
| !! | CATAAATATTTCAAACCAAA+AGG | + | chr4_2:61811650-61811669 | None:intergenic | 20.0% |
| !! | ACTATGATTGTGTATTTATT+TGG | - | chr4_2:61811673-61811692 | Msa0613170:intron | 20.0% |
| !!! | TTAAAGAATGAGTATTTTGA+TGG | + | chr4_2:61811739-61811758 | None:intergenic | 20.0% |
| !! | ACAATACAATACAAATTACA+AGG | + | chr4_2:61813283-61813302 | None:intergenic | 20.0% |
| !! | ATTAAAGAAAAATACTAGCA+AGG | - | chr4_2:61813363-61813382 | Msa0613170:five_prime_UTR | 20.0% |
| ! | AATTTACTTTCACATTAGTC+AGG | + | chr4_2:61806546-61806565 | None:intergenic | 25.0% |
| ! | ACCATTTATATAAGCTTACT+CGG | - | chr4_2:61807290-61807309 | Msa0613170:CDS | 25.0% |
| ! | ATCGTGATAAAATAGCAAAA+AGG | + | chr4_2:61807356-61807375 | None:intergenic | 25.0% |
| !!! | TGCTATTTTATCACGATTTA+TGG | - | chr4_2:61807359-61807378 | Msa0613170:intron | 25.0% |
| !! | TTAATTTCTAGACAAGTTAC+AGG | + | chr4_2:61807470-61807489 | None:intergenic | 25.0% |
| !! | GTAACTTGTCTAGAAATTAA+TGG | - | chr4_2:61807470-61807489 | Msa0613170:CDS | 25.0% |
| !! | ACATTCTCCCTTATATTTTA+TGG | - | chr4_2:61807911-61807930 | Msa0613170:intron | 25.0% |
| ! | TTTGAACACACAAATGTATA+AGG | + | chr4_2:61807948-61807967 | None:intergenic | 25.0% |
| !!! | ATAATGGTAAAAGTACTTCA+AGG | - | chr4_2:61807981-61808000 | Msa0613170:intron | 25.0% |
| ! | GTCAAATAAAAATCTGCAAT+AGG | - | chr4_2:61808213-61808232 | Msa0613170:intron | 25.0% |
| ! | ATAAAAATCTGCAATAGGTT+TGG | - | chr4_2:61808218-61808237 | Msa0613170:intron | 25.0% |
| ! | TATAGCTGATTATATTTGTC+TGG | - | chr4_2:61808329-61808348 | Msa0613170:intron | 25.0% |
| ! | AATTTACGATTACTGCATTA+AGG | - | chr4_2:61808361-61808380 | Msa0613170:CDS | 25.0% |
| ! | ATTTACGATTACTGCATTAA+GGG | - | chr4_2:61808362-61808381 | Msa0613170:CDS | 25.0% |
| !!! | ATGATCTTGCCAATTTTTTA+AGG | - | chr4_2:61808728-61808747 | Msa0613170:intron | 25.0% |
| ! | TGAGTAAGTCCTTAAAAAAT+TGG | + | chr4_2:61808740-61808759 | None:intergenic | 25.0% |
| ! | TATGGTTATGTTATGGTAAA+TGG | - | chr4_2:61808850-61808869 | Msa0613170:intron | 25.0% |
| ! | TGTTATGGTAAATGGTATTA+TGG | - | chr4_2:61808858-61808877 | Msa0613170:intron | 25.0% |
| ! | GTTATGCTACAAATCTTATT+TGG | - | chr4_2:61808907-61808926 | Msa0613170:intron | 25.0% |
| ! | TCCAAAAGAATACATAATCT+TGG | - | chr4_2:61809080-61809099 | Msa0613170:CDS | 25.0% |
| !! | ACCAAGATTATGTATTCTTT+TGG | + | chr4_2:61809084-61809103 | None:intergenic | 25.0% |
| ! | AAAGAATACATAATCTTGGT+AGG | - | chr4_2:61809084-61809103 | Msa0613170:CDS | 25.0% |
| ! | AATCTTTAATATTTCCTGCT+AGG | - | chr4_2:61809211-61809230 | Msa0613170:intron | 25.0% |
| !!! | TAATAAAAGTGTTTTTCCCT+TGG | + | chr4_2:61809317-61809336 | None:intergenic | 25.0% |
| !!! | AGATTTGAATTTTGATTGGT+TGG | + | chr4_2:61809377-61809396 | None:intergenic | 25.0% |
| !!! | TTTTTAAAAACTCGGATCTT+TGG | + | chr4_2:61809408-61809427 | None:intergenic | 25.0% |
| !!! | TTCATAGTCTTTTGAAATCA+AGG | - | chr4_2:61809672-61809691 | Msa0613170:intron | 25.0% |
| !!! | TCATAGTCTTTTGAAATCAA+GGG | - | chr4_2:61809673-61809692 | Msa0613170:intron | 25.0% |
| ! | CAAGAGTTTAAAAGGATAAT+AGG | + | chr4_2:61809831-61809850 | None:intergenic | 25.0% |
| ! | AAGAAAGACAAGAGTTTAAA+AGG | + | chr4_2:61809839-61809858 | None:intergenic | 25.0% |
| ! | CAATGTATGTTCAATAATGT+TGG | - | chr4_2:61810087-61810106 | Msa0613170:intron | 25.0% |
| ! | TCTTTCATAATTCTTCGAAT+TGG | - | chr4_2:61810136-61810155 | Msa0613170:intron | 25.0% |
| !!! | ATTCAACTTCTTTTAACTCT+GGG | + | chr4_2:61810546-61810565 | None:intergenic | 25.0% |
| !!! | AATTCAACTTCTTTTAACTC+TGG | + | chr4_2:61810547-61810566 | None:intergenic | 25.0% |
| ! | AAAAGAAGTTGAATTGCAAA+AGG | - | chr4_2:61810552-61810571 | Msa0613170:intron | 25.0% |
| ! | TGTTTCAAAACATCATATGT+TGG | - | chr4_2:61810589-61810608 | Msa0613170:intron | 25.0% |
| ! | AATGTTAATAAGCAAAAGGA+TGG | + | chr4_2:61810791-61810810 | None:intergenic | 25.0% |
| ! | TTCCTCTCTTAAATAAGAAA+AGG | - | chr4_2:61810809-61810828 | Msa0613170:CDS | 25.0% |
| !!! | AACCTTTTCTTATTTAAGAG+AGG | + | chr4_2:61810814-61810833 | None:intergenic | 25.0% |
| ! | ATCAACAAATATGTTTGACA+AGG | + | chr4_2:61811022-61811041 | None:intergenic | 25.0% |
| ! | GTAATTATCTAAATCACTGA+GGG | + | chr4_2:61811116-61811135 | None:intergenic | 25.0% |
| !!! | TTGATTTTTCTAGTGAAGAT+TGG | - | chr4_2:61811315-61811334 | Msa0613170:intron | 25.0% |
| ! | AATATCACAATATGCTATGT+TGG | - | chr4_2:61811413-61811432 | Msa0613170:intron | 25.0% |
| !! | TTGTAATGACTTATACCTTT+TGG | - | chr4_2:61811632-61811651 | Msa0613170:intron | 25.0% |
| ! | CAAAATACTCATTCTTTAAG+TGG | - | chr4_2:61811740-61811759 | Msa0613170:CDS | 25.0% |
| ! | TTCTACCACATATTTATGTT+TGG | - | chr4_2:61811792-61811811 | Msa0613170:CDS | 25.0% |
| ! | ATTTAATAGACTATGTTCCA+TGG | - | chr4_2:61812124-61812143 | Msa0613170:intron | 25.0% |
| !!! | ATATTTCTGAAGAGTTCTTT+TGG | + | chr4_2:61812260-61812279 | None:intergenic | 25.0% |
| ! | AGAACTCTTCAGAAATATTA+TGG | - | chr4_2:61812262-61812281 | Msa0613170:intron | 25.0% |
| ! | ATTATGGAAAACTATTGATG+AGG | - | chr4_2:61812278-61812297 | Msa0613170:intron | 25.0% |
| ! | AACAATTGAGCATAAAACAA+AGG | + | chr4_2:61812550-61812569 | None:intergenic | 25.0% |
| ! | TAGGAAATCGTGAAAATAAT+AGG | - | chr4_2:61812703-61812722 | Msa0613170:CDS | 25.0% |
| ! | TTATACAAACTATTGGAAAC+AGG | - | chr4_2:61812746-61812765 | Msa0613170:CDS | 25.0% |
| ! | AGTATAAAGTTCTGTTTAGA+GGG | + | chr4_2:61812836-61812855 | None:intergenic | 25.0% |
| ! | AAGTATAAAGTTCTGTTTAG+AGG | + | chr4_2:61812837-61812856 | None:intergenic | 25.0% |
| !!! | TTCAATTTTTTCAACGTAGA+TGG | - | chr4_2:61813206-61813225 | Msa0613170:five_prime_UTR | 25.0% |
| !!! | TGTTTTTTGACGGAAAACAT+GGG | + | chr4_2:61806205-61806224 | None:intergenic | 30.0% |
| !!! | ATGTTTTTTGACGGAAAACA+TGG | + | chr4_2:61806206-61806225 | None:intergenic | 30.0% |
| AAATTCACATCCGTTGAATT+TGG | - | chr4_2:61806561-61806580 | Msa0613170:intron | 30.0% | |
| AGTTCAAAGAAATGAAAGAG+TGG | + | chr4_2:61806632-61806651 | None:intergenic | 30.0% | |
| TGAGATAGTTAGTTAGTTAC+CGG | + | chr4_2:61806694-61806713 | None:intergenic | 30.0% | |
| ! | ATCAGCTATCATTTTATCCA+TGG | + | chr4_2:61806854-61806873 | None:intergenic | 30.0% |
| AATCTAATCGAATTTCGACA+AGG | + | chr4_2:61806906-61806925 | None:intergenic | 30.0% | |
| ! | AAAGTGTTAAGATCTTGAGA+GGG | + | chr4_2:61806946-61806965 | None:intergenic | 30.0% |
| TTACATTGACGTTGAACTTA+AGG | - | chr4_2:61807209-61807228 | Msa0613170:intron | 30.0% | |
| ACCGAGTAAGCTTATATAAA+TGG | + | chr4_2:61807294-61807313 | None:intergenic | 30.0% | |
| ! | AAATAGCAAAAAGGCGTATT+TGG | + | chr4_2:61807347-61807366 | None:intergenic | 30.0% |
| TGTCTAGAAATTAATGGTTG+CGG | - | chr4_2:61807476-61807495 | Msa0613170:CDS | 30.0% | |
| GAAGACATACAATAAAACCA+AGG | - | chr4_2:61807670-61807689 | Msa0613170:intron | 30.0% | |
| CAGCACACCATAAAATATAA+GGG | + | chr4_2:61807921-61807940 | None:intergenic | 30.0% | |
| ACAGCACACCATAAAATATA+AGG | + | chr4_2:61807922-61807941 | None:intergenic | 30.0% | |
| ! | TTATATTTTATGGTGTGCTG+TGG | - | chr4_2:61807921-61807940 | Msa0613170:intron | 30.0% |
| ATGTGTATAGACGAAGATAA+AGG | - | chr4_2:61808081-61808100 | Msa0613170:intron | 30.0% | |
| TGTGTATAGACGAAGATAAA+GGG | - | chr4_2:61808082-61808101 | Msa0613170:intron | 30.0% | |
| ! | CATATTGCTTTAAATGGTAC+AGG | + | chr4_2:61808151-61808170 | None:intergenic | 30.0% |
| ! | CATCAGCATATTGCTTTAAA+TGG | + | chr4_2:61808157-61808176 | None:intergenic | 30.0% |
| ! | CATTTAAAGCAATATGCTGA+TGG | - | chr4_2:61808155-61808174 | Msa0613170:intron | 30.0% |
| ! | CTATAGTAATGCTGTTTGAA+GGG | + | chr4_2:61808314-61808333 | None:intergenic | 30.0% |
| TTTACGATTACTGCATTAAG+GGG | - | chr4_2:61808363-61808382 | Msa0613170:CDS | 30.0% | |
| TAACTATTGTTGGAAATTCC+AGG | - | chr4_2:61808414-61808433 | Msa0613170:CDS | 30.0% | |
| CGTATACTTTGTGCAAAATT+TGG | - | chr4_2:61808481-61808500 | Msa0613170:CDS | 30.0% | |
| ATACTTTGTGCAAAATTTGG+TGG | - | chr4_2:61808484-61808503 | Msa0613170:intron | 30.0% | |
| TACTTTGTGCAAAATTTGGT+GGG | - | chr4_2:61808485-61808504 | Msa0613170:intron | 30.0% | |
| CTATACAATTTCAGACAACT+TGG | - | chr4_2:61808583-61808602 | Msa0613170:intron | 30.0% | |
| ! | GACCTGATACAAAAGTATAT+GGG | - | chr4_2:61808605-61808624 | Msa0613170:intron | 30.0% |
| ! | ATCCCATATACTTTTGTATC+AGG | + | chr4_2:61808610-61808629 | None:intergenic | 30.0% |
| ! | ACAAAAGTATATGGGATTGT+TGG | - | chr4_2:61808613-61808632 | Msa0613170:intron | 30.0% |
| AAGGCTTCATTGAACAATAT+GGG | + | chr4_2:61808664-61808683 | None:intergenic | 30.0% | |
| ATCAAAACCAATTGTCTTGA+AGG | + | chr4_2:61808683-61808702 | None:intergenic | 30.0% | |
| !!! | TTCAAGACAATTGGTTTTGA+TGG | - | chr4_2:61808682-61808701 | Msa0613170:intron | 30.0% |
| ! | TTACTCATCAACAGATTTTG+TGG | - | chr4_2:61808753-61808772 | Msa0613170:intron | 30.0% |
| ! | TACTCATCAACAGATTTTGT+GGG | - | chr4_2:61808754-61808773 | Msa0613170:intron | 30.0% |
| CATTTCTTGTATGTCTTGTA+TGG | - | chr4_2:61808832-61808851 | Msa0613170:intron | 30.0% | |
| TGTCTTGTATGGTTATGTTA+TGG | - | chr4_2:61808843-61808862 | Msa0613170:intron | 30.0% | |
| ! | TTTGAAGTCTGCAATTTCTA+AGG | - | chr4_2:61809144-61809163 | Msa0613170:CDS | 30.0% |
| !! | CTTACAAACATGACTTGTTA+AGG | - | chr4_2:61809182-61809201 | Msa0613170:intron | 30.0% |
| TTATGCACTCAGTTATTGTT+AGG | - | chr4_2:61809274-61809293 | Msa0613170:intron | 30.0% | |
| TTTGTATGTTTCTCTTGTAG+AGG | + | chr4_2:61809487-61809506 | None:intergenic | 30.0% | |
| TCTACAAGAGAAACATACAA+AGG | - | chr4_2:61809486-61809505 | Msa0613170:intron | 30.0% | |
| ATGTTTCTTGTACACCTTTA+GGG | + | chr4_2:61809706-61809725 | None:intergenic | 30.0% | |
| AATGTTTCTTGTACACCTTT+AGG | + | chr4_2:61809707-61809726 | None:intergenic | 30.0% | |
| GAAAAAAAATAGAGCTCCTT+GGG | + | chr4_2:61809789-61809808 | None:intergenic | 30.0% | |
| AGGATGATATTCATAAAAGC+AGG | + | chr4_2:61809811-61809830 | None:intergenic | 30.0% | |
| !!! | CAATCGTTTTTGTTTTGTGT+TGG | - | chr4_2:61809919-61809938 | Msa0613170:intron | 30.0% |
| ! | TGTGTACATCAATTGTTTCT+TGG | - | chr4_2:61810346-61810365 | Msa0613170:intron | 30.0% |
| !! | GTAAGCTGTTTGTTGTTATT+GGG | - | chr4_2:61810414-61810433 | Msa0613170:intron | 30.0% |
| !! | TAAGCTGTTTGTTGTTATTG+GGG | - | chr4_2:61810415-61810434 | Msa0613170:intron | 30.0% |
| CTTATAATGAAGCTTACCAT+AGG | + | chr4_2:61810513-61810532 | None:intergenic | 30.0% | |
| !! | TTCAACTTCTTTTAACTCTG+GGG | + | chr4_2:61810545-61810564 | None:intergenic | 30.0% |
| GTAAAAGATGAAACATGAAC+AGG | + | chr4_2:61810750-61810769 | None:intergenic | 30.0% | |
| GAGGAATGTTAATAAGCAAA+AGG | + | chr4_2:61810795-61810814 | None:intergenic | 30.0% | |
| TTATTCAGTTCATTGTCACA+TGG | - | chr4_2:61810882-61810901 | Msa0613170:CDS | 30.0% | |
| CAATTGCCAAAATTGTTTGT+CGG | + | chr4_2:61810989-61811008 | None:intergenic | 30.0% | |
| GGTAATTATCTAAATCACTG+AGG | + | chr4_2:61811117-61811136 | None:intergenic | 30.0% | |
| ! | TCAAAGGTATGCTACTTATA+TGG | - | chr4_2:61811211-61811230 | Msa0613170:intron | 30.0% |
| GATACTTGTGAAGATATTCT+AGG | + | chr4_2:61811482-61811501 | None:intergenic | 30.0% | |
| CAAAATTCTGCTAAGGAAAT+GGG | + | chr4_2:61811586-61811605 | None:intergenic | 30.0% | |
| TGAACAAAATGCCAAAAACT+TGG | - | chr4_2:61811713-61811732 | Msa0613170:intron | 30.0% | |
| !!! | TATTTTGATGGCCAAGTTTT+TGG | + | chr4_2:61811727-61811746 | None:intergenic | 30.0% |
| ! | TGCATTGAAATTTTACTCGT+TGG | - | chr4_2:61811945-61811964 | Msa0613170:intron | 30.0% |
| !! | TTCAAGAGTCTAGTCATTTT+TGG | + | chr4_2:61811991-61812010 | None:intergenic | 30.0% |
| !!! | TTTTTTACTGTCAGTTTACC+TGG | + | chr4_2:61812105-61812124 | None:intergenic | 30.0% |
| !! | TTCTCTAAAGCAATCATGTA+TGG | + | chr4_2:61812385-61812404 | None:intergenic | 30.0% |
| GTAGTGAATGTAACTATCTT+TGG | - | chr4_2:61812406-61812425 | Msa0613170:CDS | 30.0% | |
| ! | CTGCATTTCCTATTTTGTAT+AGG | - | chr4_2:61812684-61812703 | Msa0613170:CDS | 30.0% |
| CACGATTTCCTATACAAAAT+AGG | + | chr4_2:61812695-61812714 | None:intergenic | 30.0% | |
| CTTCGCATTCTTAATGTAAT+AGG | - | chr4_2:61813034-61813053 | Msa0613170:five_prime_UTR | 30.0% | |
| ! | AACATTACCTTTTCAACGTT+AGG | + | chr4_2:61813084-61813103 | None:intergenic | 30.0% |
| !!! | CATTCGATGTTTTAACTTCA+AGG | - | chr4_2:61813161-61813180 | Msa0613170:five_prime_UTR | 30.0% |
| !!! | TTTTCGTTGCTTTTGATTCG+TGG | - | chr4_2:61806287-61806306 | Msa0613170:three_prime_UTR | 35.0% |
| CAAAGAAATGAAAGAGTGGT+TGG | + | chr4_2:61806628-61806647 | None:intergenic | 35.0% | |
| TTAATCTGCGTCCCTATAAT+GGG | - | chr4_2:61806823-61806842 | Msa0613170:intron | 35.0% | |
| AAGTGTTAAGATCTTGAGAG+GGG | + | chr4_2:61806945-61806964 | None:intergenic | 35.0% | |
| !! | GAAAGTGTTAAGATCTTGAG+AGG | + | chr4_2:61806947-61806966 | None:intergenic | 35.0% |
| AACCTGTAAGTGAACAAGAA+CGG | + | chr4_2:61806991-61807010 | None:intergenic | 35.0% | |
| ! | TACATTTTCTTAGGCCCAAA+TGG | - | chr4_2:61807112-61807131 | Msa0613170:intron | 35.0% |
| ! | ACATTTTCTTAGGCCCAAAT+GGG | - | chr4_2:61807113-61807132 | Msa0613170:intron | 35.0% |
| GTAATCAGCTTCTAATTCCA+TGG | + | chr4_2:61807193-61807212 | None:intergenic | 35.0% | |
| AATCGGAAAATCCTATAGCA+TGG | + | chr4_2:61807404-61807423 | None:intergenic | 35.0% | |
| ! | TGCTATAGGATTTTCCGATT+TGG | - | chr4_2:61807404-61807423 | Msa0613170:intron | 35.0% |
| AGAAATGCTCAATGCCAAAT+CGG | + | chr4_2:61807421-61807440 | None:intergenic | 35.0% | |
| ! | TTGGCATTGAGCATTTCTTT+AGG | - | chr4_2:61807423-61807442 | Msa0613170:intron | 35.0% |
| ! | TAGCTGTCATTTGATAAAGC+TGG | - | chr4_2:61807532-61807551 | Msa0613170:CDS | 35.0% |
| TTGCAAGAATACAAGCAACT+GGG | - | chr4_2:61807753-61807772 | Msa0613170:intron | 35.0% | |
| AAGACACGTATGTTTGATAG+TGG | - | chr4_2:61807859-61807878 | Msa0613170:intron | 35.0% | |
| !! | TGGTAAAAGTACTTCAAGGT+TGG | - | chr4_2:61807985-61808004 | Msa0613170:intron | 35.0% |
| ! | AAAGTACTTCAAGGTTGGTT+AGG | - | chr4_2:61807990-61808009 | Msa0613170:intron | 35.0% |
| ATTGATAGACAGCTAAGTTG+AGG | - | chr4_2:61808030-61808049 | Msa0613170:intron | 35.0% | |
| TGCATTTGCTTACATTGCAT+TGG | + | chr4_2:61808109-61808128 | None:intergenic | 35.0% | |
| GAGTGTATGAGACTTGAAAT+TGG | + | chr4_2:61808288-61808307 | None:intergenic | 35.0% | |
| ! | GCTATAGTAATGCTGTTTGA+AGG | + | chr4_2:61808315-61808334 | None:intergenic | 35.0% |
| AAATTCCAGGTTCCATTCAT+TGG | - | chr4_2:61808427-61808446 | Msa0613170:CDS | 35.0% | |
| !! | TCCATTCATTGGACTTGTTA+TGG | - | chr4_2:61808438-61808457 | Msa0613170:CDS | 35.0% |
| !! | CCATTCATTGGACTTGTTAT+GGG | - | chr4_2:61808439-61808458 | Msa0613170:CDS | 35.0% |
| !! | TTTGGTGGGTATCTTACTTT+TGG | - | chr4_2:61808499-61808518 | Msa0613170:intron | 35.0% |
| ! | GGACCTGATACAAAAGTATA+TGG | - | chr4_2:61808604-61808623 | Msa0613170:intron | 35.0% |
| GAAGGCTTCATTGAACAATA+TGG | + | chr4_2:61808665-61808684 | None:intergenic | 35.0% | |
| AATGAAGCCTTCAAGACAAT+TGG | - | chr4_2:61808673-61808692 | Msa0613170:intron | 35.0% | |
| ATCTACTGCATATCCATTTG+TGG | - | chr4_2:61808967-61808986 | Msa0613170:intron | 35.0% | |
| TAGCAAGTATCCTAAACACT+TGG | + | chr4_2:61809018-61809037 | None:intergenic | 35.0% | |
| ATTGTTAGGAACCCAAGAAT+TGG | - | chr4_2:61809288-61809307 | Msa0613170:intron | 35.0% | |
| !!! | GAATTTTGATTGGTTGGTGT+AGG | + | chr4_2:61809371-61809390 | None:intergenic | 35.0% |
| TATGCCAATGATGATTTCCA+AGG | - | chr4_2:61809435-61809454 | Msa0613170:intron | 35.0% | |
| ATGCCAATGATGATTTCCAA+GGG | - | chr4_2:61809436-61809455 | Msa0613170:intron | 35.0% | |
| ATTCCCTTGGAAATCATCAT+TGG | + | chr4_2:61809442-61809461 | None:intergenic | 35.0% | |
| AATGATGATTTCCAAGGGAA+TGG | - | chr4_2:61809441-61809460 | Msa0613170:intron | 35.0% | |
| AATAAAGACTTCCATTCCCT+TGG | + | chr4_2:61809455-61809474 | None:intergenic | 35.0% | |
| TAGAACAGGGAGAATAAGTT+AGG | + | chr4_2:61809555-61809574 | None:intergenic | 35.0% | |
| AACTGTTAGGAGTTAGAACA+GGG | + | chr4_2:61809568-61809587 | None:intergenic | 35.0% | |
| TAACTGTTAGGAGTTAGAAC+AGG | + | chr4_2:61809569-61809588 | None:intergenic | 35.0% | |
| !!! | TCTTTTGAAATCAAGGGATC+TGG | - | chr4_2:61809679-61809698 | Msa0613170:intron | 35.0% |
| !!! | CTTTTGAAATCAAGGGATCT+GGG | - | chr4_2:61809680-61809699 | Msa0613170:intron | 35.0% |
| GGTGTACAAGAAACATTAAG+CGG | - | chr4_2:61809710-61809729 | Msa0613170:intron | 35.0% | |
| GGAAAAAAAATAGAGCTCCT+TGG | + | chr4_2:61809790-61809809 | None:intergenic | 35.0% | |
| AAGGAGATAATGTGCAACAA+AGG | + | chr4_2:61809863-61809882 | None:intergenic | 35.0% | |
| AGAGATCTGAACAGTGAAAA+AGG | + | chr4_2:61809882-61809901 | None:intergenic | 35.0% | |
| GAATTGGTTACACAGTCAAT+AGG | - | chr4_2:61810152-61810171 | Msa0613170:intron | 35.0% | |
| TTGTAAGAAGACCAACAGAT+GGG | - | chr4_2:61810189-61810208 | Msa0613170:intron | 35.0% | |
| GGCTATAACACAGATTATGT+TGG | - | chr4_2:61810221-61810240 | Msa0613170:intron | 35.0% | |
| !! | CTATTTCTGCTATTGAGGAT+GGG | - | chr4_2:61810246-61810265 | Msa0613170:intron | 35.0% |
| ! | TACATCAATTGTTTCTTGGC+AGG | - | chr4_2:61810350-61810369 | Msa0613170:intron | 35.0% |
| GCAGGTAAACATAATGATAG+TGG | - | chr4_2:61810368-61810387 | Msa0613170:intron | 35.0% | |
| !! | GGTAAGCTGTTTGTTGTTAT+TGG | - | chr4_2:61810413-61810432 | Msa0613170:intron | 35.0% |
| GAATTGCAAAAGGTTATTCC+AGG | - | chr4_2:61810562-61810581 | Msa0613170:intron | 35.0% | |
| !!! | GATGTTTTGAAACAAGATCC+TGG | + | chr4_2:61810583-61810602 | None:intergenic | 35.0% |
| ATCTTCATGAGATGCTTTCT+TGG | - | chr4_2:61810664-61810683 | Msa0613170:intron | 35.0% | |
| TCTTCATGAGATGCTTTCTT+GGG | - | chr4_2:61810665-61810684 | Msa0613170:intron | 35.0% | |
| CAAATGTGCTAACATGAGTT+TGG | + | chr4_2:61810861-61810880 | None:intergenic | 35.0% | |
| ! | GCTTTTCCGACAAACAATTT+TGG | - | chr4_2:61810980-61810999 | Msa0613170:CDS | 35.0% |
| AATATGTTTGACAAGGAGAG+CGG | + | chr4_2:61811015-61811034 | None:intergenic | 35.0% | |
| !! | AGAGAACTTGCTGATGTAAT+CGG | - | chr4_2:61811076-61811095 | Msa0613170:CDS | 35.0% |
| CTAGCAAACACAACTTCAAT+CGG | - | chr4_2:61811157-61811176 | Msa0613170:intron | 35.0% | |
| ! | ACAGGTGTTTCATCAACTTT+TGG | + | chr4_2:61811190-61811209 | None:intergenic | 35.0% |
| TGATGAAACACCTGTTTCAA+AGG | - | chr4_2:61811195-61811214 | Msa0613170:intron | 35.0% | |
| !! | AAGTAGCATACCTTTGAAAC+AGG | + | chr4_2:61811208-61811227 | None:intergenic | 35.0% |
| ATGGCTGTACTAAACCAATT+AGG | - | chr4_2:61811230-61811249 | Msa0613170:intron | 35.0% | |
| TGGCTGTACTAAACCAATTA+GGG | - | chr4_2:61811231-61811250 | Msa0613170:intron | 35.0% | |
| CCACTAACAATAATAGCACA+AGG | + | chr4_2:61811257-61811276 | None:intergenic | 35.0% | |
| ! | CCTTGTGCTATTATTGTTAG+TGG | - | chr4_2:61811254-61811273 | Msa0613170:intron | 35.0% |
| ! | GCGTCATGATGTGATTTTAT+TGG | + | chr4_2:61811441-61811460 | None:intergenic | 35.0% |
| ! | TTCTAGGAACCAACTTAACA+CGG | + | chr4_2:61811466-61811485 | None:intergenic | 35.0% |
| CCAAAATTCTGCTAAGGAAA+TGG | + | chr4_2:61811587-61811606 | None:intergenic | 35.0% | |
| ! | CCATTTCCTTAGCAGAATTT+TGG | - | chr4_2:61811584-61811603 | Msa0613170:intron | 35.0% |
| !! | TTCCTTAGCAGAATTTTGGT+TGG | - | chr4_2:61811588-61811607 | Msa0613170:intron | 35.0% |
| !!! | TCCTTAGCAGAATTTTGGTT+GGG | - | chr4_2:61811589-61811608 | Msa0613170:intron | 35.0% |
| ACTCATTCTTTAAGTGGAAG+TGG | - | chr4_2:61811746-61811765 | Msa0613170:CDS | 35.0% | |
| !!! | TGGTAGAAGTGCTTTTGTTT+GGG | + | chr4_2:61811780-61811799 | None:intergenic | 35.0% |
| ACAGGCCAAACATAAATATG+TGG | + | chr4_2:61811800-61811819 | None:intergenic | 35.0% | |
| ACATATTTATGTTTGGCCTG+TGG | - | chr4_2:61811799-61811818 | Msa0613170:CDS | 35.0% | |
| TTGAAAGAAGCAGAAGAATC+TGG | - | chr4_2:61812006-61812025 | Msa0613170:intron | 35.0% | |
| CGACAATATGAGCATTATAC+TGG | - | chr4_2:61812075-61812094 | Msa0613170:intron | 35.0% | |
| ! | ACTATGTTCCATGGACTTTT+TGG | - | chr4_2:61812133-61812152 | Msa0613170:intron | 35.0% |
| AAGTACAAACCACTGAAACA+GGG | + | chr4_2:61812174-61812193 | None:intergenic | 35.0% | |
| AAAGTACAAACCACTGAAAC+AGG | + | chr4_2:61812175-61812194 | None:intergenic | 35.0% | |
| GATCAGTGAGATAGAAGTTA+GGG | + | chr4_2:61812312-61812331 | None:intergenic | 35.0% | |
| TGATCAGTGAGATAGAAGTT+AGG | + | chr4_2:61812313-61812332 | None:intergenic | 35.0% | |
| GGTGATAACTTTCTATACGA+AGG | + | chr4_2:61812342-61812361 | None:intergenic | 35.0% | |
| TACAAACTATTGGAAACAGG+AGG | - | chr4_2:61812749-61812768 | Msa0613170:exon | 35.0% | |
| AGTAAATTGAAAAGGTGAGC+AGG | + | chr4_2:61812860-61812879 | None:intergenic | 35.0% | |
| TTTCAAAGGATAATGTGTCG+AGG | + | chr4_2:61812969-61812988 | None:intergenic | 35.0% | |
| !! | CACATTATCCTTTGAAACAC+AGG | - | chr4_2:61812972-61812991 | Msa0613170:five_prime_UTR | 35.0% |
| AATAGGACGACAACAATAAG+AGG | - | chr4_2:61813051-61813070 | Msa0613170:five_prime_UTR | 35.0% | |
| ! | CCTTTTCAACGTTAGGTATT+AGG | + | chr4_2:61813077-61813096 | None:intergenic | 35.0% |
| CCTAATACCTAACGTTGAAA+AGG | - | chr4_2:61813074-61813093 | Msa0613170:five_prime_UTR | 35.0% | |
| TGCATCTTAATCCTAGAAGT+AGG | - | chr4_2:61813118-61813137 | Msa0613170:five_prime_UTR | 35.0% | |
| TCTTAATCCTAGAAGTAGGA+TGG | - | chr4_2:61813122-61813141 | Msa0613170:five_prime_UTR | 35.0% | |
| ! | TTTTGACGGAAAACATGGGT+GGG | + | chr4_2:61806201-61806220 | None:intergenic | 40.0% |
| ! | TTTTTGACGGAAAACATGGG+TGG | + | chr4_2:61806202-61806221 | None:intergenic | 40.0% |
| AAACCACGAAATGTTGTACG+TGG | + | chr4_2:61806270-61806289 | None:intergenic | 40.0% | |
| AGTTGGTTAGATGCATCGAA+TGG | - | chr4_2:61806510-61806529 | Msa0613170:intron | 40.0% | |
| GATAGTTAGTTAGTTACCGG+TGG | + | chr4_2:61806691-61806710 | None:intergenic | 40.0% | |
| GTTAATCTGCGTCCCTATAA+TGG | - | chr4_2:61806822-61806841 | Msa0613170:intron | 40.0% | |
| TACATACCACCTTCCCATTT+GGG | + | chr4_2:61807129-61807148 | None:intergenic | 40.0% | |
| ATACATACCACCTTCCCATT+TGG | + | chr4_2:61807130-61807149 | None:intergenic | 40.0% | |
| ! | TGGTGATGAAAATCAACGCT+TGG | - | chr4_2:61807152-61807171 | Msa0613170:intron | 40.0% |
| ATCAACGCTTGGATGCATTA+CGG | - | chr4_2:61807163-61807182 | Msa0613170:intron | 40.0% | |
| CAATCTTTGCACCATGCTAT+AGG | - | chr4_2:61807390-61807409 | Msa0613170:intron | 40.0% | |
| ! | TTCTTTAGGAACTCATCTGC+TGG | - | chr4_2:61807437-61807456 | Msa0613170:intron | 40.0% |
| ! | ATGAGCAACCTTTGGAGATA+TGG | + | chr4_2:61807627-61807646 | None:intergenic | 40.0% |
| TAGAACTGATGAGCAACCTT+TGG | + | chr4_2:61807635-61807654 | None:intergenic | 40.0% | |
| GTGAGATGAAACAATGACCT+TGG | + | chr4_2:61807690-61807709 | None:intergenic | 40.0% | |
| GTTGCAAGAATACAAGCAAC+TGG | - | chr4_2:61807752-61807771 | Msa0613170:intron | 40.0% | |
| TGCAAGAATACAAGCAACTG+GGG | - | chr4_2:61807754-61807773 | Msa0613170:intron | 40.0% | |
| CCCATAACAAGTCCAATGAA+TGG | + | chr4_2:61808442-61808461 | None:intergenic | 40.0% | |
| TGCAACAGATCCTTAAGTGT+AGG | + | chr4_2:61808562-61808581 | None:intergenic | 40.0% | |
| ! | CAACAGATTTTGTGGGATTC+AGG | - | chr4_2:61808761-61808780 | Msa0613170:intron | 40.0% |
| ! | GTTTGCTAATGAGCTATGTG+TGG | - | chr4_2:61808930-61808949 | Msa0613170:intron | 40.0% |
| TGCATATCCATTTGTGGCTT+GGG | - | chr4_2:61808973-61808992 | Msa0613170:intron | 40.0% | |
| TCAATAACCCAAGCCACAAA+TGG | + | chr4_2:61808983-61809002 | None:intergenic | 40.0% | |
| GGCTTGGGTTATTGAAATGT+TGG | - | chr4_2:61808988-61809007 | Msa0613170:intron | 40.0% | |
| ! | TGTTGGTCTACCAAGTGTTT+AGG | - | chr4_2:61809005-61809024 | Msa0613170:intron | 40.0% |
| AACCCAAGAATTGGATTCCA+AGG | - | chr4_2:61809297-61809316 | Msa0613170:CDS | 40.0% | |
| ACCCAAGAATTGGATTCCAA+GGG | - | chr4_2:61809298-61809317 | Msa0613170:CDS | 40.0% | |
| TCCCTTGGAATCCAATTCTT+GGG | + | chr4_2:61809302-61809321 | None:intergenic | 40.0% | |
| TTCCCTTGGAATCCAATTCT+TGG | + | chr4_2:61809303-61809322 | None:intergenic | 40.0% | |
| AACCTCGTCACAACACTTAA+GGG | + | chr4_2:61810023-61810042 | None:intergenic | 40.0% | |
| TAACCAAATACCTTAGCCAC+TGG | + | chr4_2:61810049-61810068 | None:intergenic | 40.0% | |
| GTTGTAAGAAGACCAACAGA+TGG | - | chr4_2:61810188-61810207 | Msa0613170:intron | 40.0% | |
| !! | TGGTGCTATTTCTGCTATTG+AGG | - | chr4_2:61810241-61810260 | Msa0613170:intron | 40.0% |
| !! | GCTATTTCTGCTATTGAGGA+TGG | - | chr4_2:61810245-61810264 | Msa0613170:intron | 40.0% |
| GAGGTAGTTGTTGTATCTAG+TGG | - | chr4_2:61810273-61810292 | Msa0613170:intron | 40.0% | |
| GATGTACACAACAACATCTC+AGG | + | chr4_2:61810336-61810355 | None:intergenic | 40.0% | |
| ACAAACAGCTTACCAGCTAA+TGG | + | chr4_2:61810407-61810426 | None:intergenic | 40.0% | |
| GCTTATGGTGCAAAAGAGAA+AGG | - | chr4_2:61810461-61810480 | Msa0613170:intron | 40.0% | |
| AATGAAGCTTACCATAGGTG+CGG | + | chr4_2:61810508-61810527 | None:intergenic | 40.0% | |
| !! | AACTTCTTTTAACTCTGGGG+AGG | + | chr4_2:61810542-61810561 | None:intergenic | 40.0% |
| ! | AAAGGATGGTAATGCATGCA+GGG | + | chr4_2:61810777-61810796 | None:intergenic | 40.0% |
| ! | AAAAGGATGGTAATGCATGC+AGG | + | chr4_2:61810778-61810797 | None:intergenic | 40.0% |
| TGTTTGTCGGAAAAGCCATA+TGG | + | chr4_2:61810976-61810995 | None:intergenic | 40.0% | |
| GATTACATCAGCAAGTTCTC+TGG | + | chr4_2:61811077-61811096 | None:intergenic | 40.0% | |
| TAATAGCACAAGGCCCTAAT+TGG | + | chr4_2:61811247-61811266 | None:intergenic | 40.0% | |
| CTATGATGAGATGCAATTGC+TGG | - | chr4_2:61811501-61811520 | Msa0613170:intron | 40.0% | |
| TCCCAACCAAAATTCTGCTA+AGG | + | chr4_2:61811593-61811612 | None:intergenic | 40.0% | |
| TTCTTTAAGTGGAAGTGGAG+CGG | - | chr4_2:61811751-61811770 | Msa0613170:CDS | 40.0% | |
| !!! | GTGGTAGAAGTGCTTTTGTT+TGG | + | chr4_2:61811781-61811800 | None:intergenic | 40.0% |
| ! | ATCTAGAATAGAAACGCCAC+AGG | + | chr4_2:61811818-61811837 | None:intergenic | 40.0% |
| TGTGGCGTTTCTATTCTAGA+TGG | - | chr4_2:61811817-61811836 | Msa0613170:CDS | 40.0% | |
| ! | ATGAGAGTAAGTTGACCTTC+AGG | - | chr4_2:61811892-61811911 | Msa0613170:CDS | 40.0% |
| ! | TGAGAGTAAGTTGACCTTCA+GGG | - | chr4_2:61811893-61811912 | Msa0613170:CDS | 40.0% |
| ! | AGAAGTGATTAGTTCCCTGA+AGG | + | chr4_2:61811910-61811929 | None:intergenic | 40.0% |
| ACAGGACTGGAGATGTTTAT+TGG | - | chr4_2:61812042-61812061 | Msa0613170:intron | 40.0% | |
| AAACAGGGACAACGAAATCA+GGG | + | chr4_2:61812159-61812178 | None:intergenic | 40.0% | |
| GTCGAGGATAATAAACAGAC+AGG | + | chr4_2:61812953-61812972 | None:intergenic | 40.0% | |
| GTCTGTAACCTGTGTTTCAA+AGG | + | chr4_2:61812983-61813002 | None:intergenic | 40.0% | |
| TTGAAACACAGGTTACAGAC+AGG | - | chr4_2:61812983-61813002 | Msa0613170:five_prime_UTR | 40.0% | |
| AACTTCAAGGTTGTAAACGC+TGG | - | chr4_2:61813174-61813193 | Msa0613170:five_prime_UTR | 40.0% | |
| !! | TTCGTTGACTCATGCTTCGT+GGG | + | chr4_2:61806158-61806177 | None:intergenic | 45.0% |
| !! | TTTCGTTGACTCATGCTTCG+TGG | + | chr4_2:61806159-61806178 | None:intergenic | 45.0% |
| TAGCCACGTACAACATTTCG+TGG | - | chr4_2:61806264-61806283 | Msa0613170:three_prime_UTR | 45.0% | |
| GAACCTGCTGTTACTAGGAA+CGG | + | chr4_2:61806421-61806440 | None:intergenic | 45.0% | |
| TTCCTAGTAACAGCAGGTTC+CGG | - | chr4_2:61806421-61806440 | Msa0613170:three_prime_UTR | 45.0% | |
| TGTTCACTTCTCCTCTTCCT+CGG | + | chr4_2:61806453-61806472 | None:intergenic | 45.0% | |
| GTGAGTGGGACCAAATTCAA+CGG | + | chr4_2:61806574-61806593 | None:intergenic | 45.0% | |
| ! | TTGGATTGCGACTTGCTTTG+TGG | + | chr4_2:61806609-61806628 | None:intergenic | 45.0% |
| GTTAGTTAGTTACCGGTGGT+AGG | + | chr4_2:61806687-61806706 | None:intergenic | 45.0% | |
| CCATGGTTTCGCCCATTATA+GGG | + | chr4_2:61806837-61806856 | None:intergenic | 45.0% | |
| TCCATGGTTTCGCCCATTAT+AGG | + | chr4_2:61806838-61806857 | None:intergenic | 45.0% | |
| TGCCGTTCTTGTTCACTTAC+AGG | - | chr4_2:61806986-61807005 | Msa0613170:intron | 45.0% | |
| TTTCTTAGGCCCAAATGGGA+AGG | - | chr4_2:61807117-61807136 | Msa0613170:intron | 45.0% | |
| TGGGAAGGTGGTATGTATGA+TGG | - | chr4_2:61807132-61807151 | Msa0613170:intron | 45.0% | |
| TTTGGAGATATGGCAGGAAC+AGG | + | chr4_2:61807617-61807636 | None:intergenic | 45.0% | |
| TGTTCCTGCCATATCTCCAA+AGG | - | chr4_2:61807616-61807635 | Msa0613170:intron | 45.0% | |
| CAGTTCTACGACTCTATACG+CGG | - | chr4_2:61807647-61807666 | Msa0613170:intron | 45.0% | |
| AGTTCTACGACTCTATACGC+GGG | - | chr4_2:61807648-61807667 | Msa0613170:intron | 45.0% | |
| TTGCCAAGATCCTCAACTGA+CGG | + | chr4_2:61807728-61807747 | None:intergenic | 45.0% | |
| GGCGCGGATGTTTCAAATTA+TGG | - | chr4_2:61807823-61807842 | Msa0613170:intron | 45.0% | |
| ! | ACAGCTAAGTTGAGGAAGAG+AGG | - | chr4_2:61808038-61808057 | Msa0613170:intron | 45.0% |
| ! | AGCAATATGCTGATGGTGCT+AGG | - | chr4_2:61808162-61808181 | Msa0613170:intron | 45.0% |
| CAAGTCCAATGAATGGAACC+TGG | + | chr4_2:61808435-61808454 | None:intergenic | 45.0% | |
| ! | ACTTTTGGTACACTCGAGTC+AGG | - | chr4_2:61808514-61808533 | Msa0613170:intron | 45.0% |
| ! | CTTTTGGTACACTCGAGTCA+GGG | - | chr4_2:61808515-61808534 | Msa0613170:intron | 45.0% |
| ! | TTTTGGTACACTCGAGTCAG+GGG | - | chr4_2:61808516-61808535 | Msa0613170:intron | 45.0% |
| TCCAGGTCAACCTACACTTA+AGG | - | chr4_2:61808549-61808568 | Msa0613170:intron | 45.0% | |
| ! | TCCTTAAGTGTAGGTTGACC+TGG | + | chr4_2:61808553-61808572 | None:intergenic | 45.0% |
| GGTGATTTACTGTGACTGAC+AGG | + | chr4_2:61808643-61808662 | None:intergenic | 45.0% | |
| CTGCATATCCATTTGTGGCT+TGG | - | chr4_2:61808972-61808991 | Msa0613170:intron | 45.0% | |
| !! | AAACATAGGAAGTGCTGTCG+AGG | - | chr4_2:61809053-61809072 | Msa0613170:intron | 45.0% |
| AACTACAATCGATGCCTAGC+AGG | + | chr4_2:61809228-61809247 | None:intergenic | 45.0% | |
| !! | TGCTAGGCATCGATTGTAGT+TGG | - | chr4_2:61809227-61809246 | Msa0613170:intron | 45.0% |
| AACCCTTGCTTAAATGCCCA+AGG | - | chr4_2:61809770-61809789 | Msa0613170:intron | 45.0% | |
| CTCCTTGGGCATTTAAGCAA+GGG | + | chr4_2:61809775-61809794 | None:intergenic | 45.0% | |
| CCAAACTCTAGTTGTGTGAG+AGG | + | chr4_2:61809954-61809973 | None:intergenic | 45.0% | |
| CCTCTCACACAACTAGAGTT+TGG | - | chr4_2:61809951-61809970 | Msa0613170:intron | 45.0% | |
| CAACCTCGTCACAACACTTA+AGG | + | chr4_2:61810024-61810043 | None:intergenic | 45.0% | |
| ! | GATCCAGTGGCTAAGGTATT+TGG | - | chr4_2:61810043-61810062 | Msa0613170:intron | 45.0% |
| CCAATCAACTTCCCATCTGT+TGG | + | chr4_2:61810203-61810222 | None:intergenic | 45.0% | |
| ! | CCAACAGATGGGAAGTTGAT+TGG | - | chr4_2:61810200-61810219 | Msa0613170:intron | 45.0% |
| ! | ACAGCTGTTTCACCATTAGC+TGG | - | chr4_2:61810392-61810411 | Msa0613170:intron | 45.0% |
| !! | CTGTTTGTTGTTATTGGGGC+CGG | - | chr4_2:61810419-61810438 | Msa0613170:intron | 45.0% |
| GTGCAAAAGAGAAAGGAGCA+AGG | - | chr4_2:61810468-61810487 | Msa0613170:intron | 45.0% | |
| ! | AAGGATGGTAATGCATGCAG+GGG | + | chr4_2:61810776-61810795 | None:intergenic | 45.0% |
| ! | GAATGCAACGCTGATTGAAG+CGG | + | chr4_2:61810952-61810971 | None:intergenic | 45.0% |
| TCAGCGTTGCATTCACCATA+TGG | - | chr4_2:61810958-61810977 | Msa0613170:CDS | 45.0% | |
| !! | GAACTTGCTGATGTAATCGG+TGG | - | chr4_2:61811079-61811098 | Msa0613170:CDS | 45.0% |
| TAGGAACCAACTTAACACGG+TGG | + | chr4_2:61811463-61811482 | None:intergenic | 45.0% | |
| ! | TCTGGAGCCACTATTGTAAC+AGG | - | chr4_2:61812024-61812043 | Msa0613170:intron | 45.0% |
| AGCCACTATTGTAACAGGAC+TGG | - | chr4_2:61812029-61812048 | Msa0613170:intron | 45.0% | |
| CTCCAGTCCTGTTACAATAG+TGG | + | chr4_2:61812034-61812053 | None:intergenic | 45.0% | |
| GAGCATTATACTGGATTGCC+AGG | - | chr4_2:61812084-61812103 | Msa0613170:intron | 45.0% | |
| AATCAGGGCCAAAAAGTCCA+TGG | + | chr4_2:61812144-61812163 | None:intergenic | 45.0% | |
| GAAACAGGGACAACGAAATC+AGG | + | chr4_2:61812160-61812179 | None:intergenic | 45.0% | |
| TTTCGTTGTCCCTGTTTCAG+TGG | - | chr4_2:61812162-61812181 | Msa0613170:intron | 45.0% | |
| !! | GAGTGCTGGATATAAGCACA+AGG | + | chr4_2:61812363-61812382 | None:intergenic | 45.0% |
| AGCAATCATGTATGGAGTGC+TGG | + | chr4_2:61812377-61812396 | None:intergenic | 45.0% | |
| !! | TAAAAAATAAAAAAGATAAT+TGG | + | chr4_2:61806778-61806797 | None:intergenic | 5.0% |
| !!! | AATTCTTTTAATTTATTAAA+TGG | - | chr4_2:61810632-61810651 | Msa0613170:intron | 5.0% |
| GACTCATGCTTCGTGGGAAT+AGG | + | chr4_2:61806152-61806171 | None:intergenic | 50.0% | |
| TGAGTGAGATCGGATGCGAT+GGG | + | chr4_2:61806366-61806385 | None:intergenic | 50.0% | |
| !! | GACTTGCTTTGTGGTGATGG+GGG | + | chr4_2:61806600-61806619 | None:intergenic | 50.0% |
| ! | CGACTTGCTTTGTGGTGATG+GGG | + | chr4_2:61806601-61806620 | None:intergenic | 50.0% |
| ! | GCGACTTGCTTTGTGGTGAT+GGG | + | chr4_2:61806602-61806621 | None:intergenic | 50.0% |
| ! | TGCGACTTGCTTTGTGGTGA+TGG | + | chr4_2:61806603-61806622 | None:intergenic | 50.0% |
| !! | CCCTATAATGGGCGAAACCA+TGG | - | chr4_2:61806834-61806853 | Msa0613170:intron | 50.0% |
| ! | GGATGCATTACGGTTAGCCA+TGG | - | chr4_2:61807173-61807192 | Msa0613170:intron | 50.0% |
| ! | GCAACCTTTGGAGATATGGC+AGG | + | chr4_2:61807623-61807642 | None:intergenic | 50.0% |
| TCAGCAAACTCCGTCAGTTG+AGG | - | chr4_2:61807715-61807734 | Msa0613170:intron | 50.0% | |
| ACTCCGTCAGTTGAGGATCT+TGG | - | chr4_2:61807722-61807741 | Msa0613170:intron | 50.0% | |
| AAAGATTGCAACGACTGCCG+TGG | - | chr4_2:61807787-61807806 | Msa0613170:intron | 50.0% | |
| !! | TTGGACTTGTTATGGGCGAC+AGG | - | chr4_2:61808446-61808465 | Msa0613170:CDS | 50.0% |
| !! | TGGACTTGTTATGGGCGACA+GGG | - | chr4_2:61808447-61808466 | Msa0613170:CDS | 50.0% |
| GCTCCTTGGGCATTTAAGCA+AGG | + | chr4_2:61809776-61809795 | None:intergenic | 50.0% | |
| CAGCGTTACCATTCCTCACA+AGG | - | chr4_2:61809991-61810010 | Msa0613170:intron | 50.0% | |
| CGTTACCATTCCTCACAAGG+AGG | - | chr4_2:61809994-61810013 | Msa0613170:intron | 50.0% | |
| ! | AGCCCTTAAGTGTTGTGACG+AGG | - | chr4_2:61810018-61810037 | Msa0613170:intron | 50.0% |
| ! | TTGTGACGAGGTTGATCCAG+TGG | - | chr4_2:61810030-61810049 | Msa0613170:intron | 50.0% |
| !! | TTTGTTGTTATTGGGGCCGG+TGG | - | chr4_2:61810422-61810441 | Msa0613170:intron | 50.0% |
| GTGATTGCAAACCGCACCTA+TGG | - | chr4_2:61810494-61810513 | Msa0613170:intron | 50.0% | |
| ! | AGGATGGTAATGCATGCAGG+GGG | + | chr4_2:61810775-61810794 | None:intergenic | 50.0% |
| ATGACGCCACCGTGTTAAGT+TGG | - | chr4_2:61811454-61811473 | Msa0613170:intron | 50.0% | |
| TGACGGAAAACATGGGTGGG+TGG | + | chr4_2:61806198-61806217 | None:intergenic | 55.0% | |
| GAGTGAGATCGGATGCGATG+GGG | + | chr4_2:61806365-61806384 | None:intergenic | 55.0% | |
| GTGAGTGAGATCGGATGCGA+TGG | + | chr4_2:61806367-61806386 | None:intergenic | 55.0% | |
| GGTGCGAGAGTGAGTGAGAT+CGG | + | chr4_2:61806376-61806395 | None:intergenic | 55.0% | |
| CACTCACTCTCGCACCTTCA+CGG | - | chr4_2:61806380-61806399 | Msa0613170:three_prime_UTR | 55.0% | |
| GTCTACTGAACTCGCCGTGA+AGG | + | chr4_2:61806397-61806416 | None:intergenic | 55.0% | |
| ACGCCGTTCCTAGTAACAGC+AGG | - | chr4_2:61806415-61806434 | Msa0613170:three_prime_UTR | 55.0% | |
| !! | TGCTTTGTGGTGATGGGGGT+TGG | + | chr4_2:61806596-61806615 | None:intergenic | 55.0% |
| TAGTTACCGGTGGTAGGTGC+TGG | + | chr4_2:61806681-61806700 | None:intergenic | 55.0% | |
| CTTAGGCCCAAATGGGAAGG+TGG | - | chr4_2:61807120-61807139 | Msa0613170:intron | 55.0% | |
| TGCCGTGGAGATCACTGATG+TGG | - | chr4_2:61807802-61807821 | Msa0613170:intron | 55.0% | |
| CGCCACATCAGTGATCTCCA+CGG | + | chr4_2:61807807-61807826 | None:intergenic | 55.0% | |
| TGGAGATCACTGATGTGGCG+CGG | - | chr4_2:61807807-61807826 | Msa0613170:intron | 55.0% | |
| !! | GGACTTGTTATGGGCGACAG+GGG | - | chr4_2:61808448-61808467 | Msa0613170:CDS | 55.0% |
| TCAGGGGTAGTTTCAGCTCC+AGG | - | chr4_2:61808532-61808551 | Msa0613170:intron | 55.0% | |
| TCAAGGGATCTGGGCCCTAA+AGG | - | chr4_2:61809689-61809708 | Msa0613170:intron | 55.0% | |
| TTAAGGGCTGCCTCCTTGTG+AGG | + | chr4_2:61810007-61810026 | None:intergenic | 55.0% | |
| ! | CGAGGTTGATCCAGTGGCTA+AGG | - | chr4_2:61810036-61810055 | Msa0613170:intron | 55.0% |
| !! | GCTATTGAGGATGGGCTACG+AGG | - | chr4_2:61810254-61810273 | Msa0613170:intron | 55.0% |
| !! | GCTGGGAAGGCACTTGCTTA+TGG | - | chr4_2:61810446-61810465 | Msa0613170:intron | 55.0% |
| CTGCTCGCCATCCTACTTCT+AGG | + | chr4_2:61813132-61813151 | None:intergenic | 55.0% | |
| CGCCGGAACCTGCTGTTACT+AGG | + | chr4_2:61806426-61806445 | None:intergenic | 60.0% | |
| TCCTCTTCCTCGGACTTCGC+CGG | + | chr4_2:61806443-61806462 | None:intergenic | 60.0% | |
| !! | GGTGATGGGGGTTGGTGAGT+GGG | + | chr4_2:61806588-61806607 | None:intergenic | 60.0% |
| !! | TGGTGATGGGGGTTGGTGAG+TGG | + | chr4_2:61806589-61806608 | None:intergenic | 60.0% |
| AAGCAGCCAGCACCTACCAC+CGG | - | chr4_2:61806672-61806691 | Msa0613170:intron | 60.0% | |
| GGCTGCCTCCTTGTGAGGAA+TGG | + | chr4_2:61810002-61810021 | None:intergenic | 60.0% | |
| TTATTGGGGCCGGTGGTGCT+GGG | - | chr4_2:61810429-61810448 | Msa0613170:intron | 60.0% | |
| AAGTGCCTTCCCAGCACCAC+CGG | + | chr4_2:61810441-61810460 | None:intergenic | 60.0% | |
| TCCGGCGAAGTCCGAGGAAG+AGG | - | chr4_2:61806439-61806458 | Msa0613170:intron | 65.0% | |
| GTTATTGGGGCCGGTGGTGC+TGG | - | chr4_2:61810428-61810447 | Msa0613170:intron | 65.0% | |
| GCAGGTTCCGGCGAAGTCCG+AGG | - | chr4_2:61806433-61806452 | Msa0613170:three_prime_UTR | 70.0% | |
| ! | TGGGGCCGGTGGTGCTGGGA+AGG | - | chr4_2:61810433-61810452 | Msa0613170:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 61806143 | 61813427 | 61806143 | ID=Msa0613170;Name=Msa0613170 |
| chr4_2 | mRNA | 61806143 | 61813427 | 61806143 | ID=Msa0613170-mRNA-1;Parent=Msa0613170;Name=Msa0613170-mRNA-1;_AED=0.10;_eAED=0.10;_QI=557|0.91|0.84|1|0.75|0.61|13|316|503 |
| chr4_2 | exon | 61806143 | 61806454 | 61806143 | ID=Msa0613170-mRNA-1:exon:16938;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61807271 | 61807315 | 61807271 | ID=Msa0613170-mRNA-1:exon:16937;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61807465 | 61807627 | 61807465 | ID=Msa0613170-mRNA-1:exon:16936;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61808354 | 61808502 | 61808354 | ID=Msa0613170-mRNA-1:exon:16935;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61809055 | 61809198 | 61809055 | ID=Msa0613170-mRNA-1:exon:16934;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61809295 | 61809403 | 61809295 | ID=Msa0613170-mRNA-1:exon:16933;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61809513 | 61809576 | 61809513 | ID=Msa0613170-mRNA-1:exon:16932;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61810788 | 61811016 | 61810788 | ID=Msa0613170-mRNA-1:exon:16931;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61811050 | 61811134 | 61811050 | ID=Msa0613170-mRNA-1:exon:16930;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61811714 | 61811932 | 61811714 | ID=Msa0613170-mRNA-1:exon:16929;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61812340 | 61812445 | 61812340 | ID=Msa0613170-mRNA-1:exon:16928;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61812563 | 61812771 | 61812563 | ID=Msa0613170-mRNA-1:exon:16927;Parent=Msa0613170-mRNA-1 |
| chr4_2 | exon | 61812877 | 61813427 | 61812877 | ID=Msa0613170-mRNA-1:exon:16926;Parent=Msa0613170-mRNA-1 |
| chr4_2 | five_prime_UTR | 61812877 | 61813427 | 61812877 | ID=Msa0613170-mRNA-1:five_prime_utr;Parent=Msa0613170-mRNA-1 |
| chr4_2 | five_prime_UTR | 61812766 | 61812771 | 61812766 | ID=Msa0613170-mRNA-1:five_prime_utr;Parent=Msa0613170-mRNA-1 |
| chr4_2 | CDS | 61812563 | 61812765 | 61812563 | ID=Msa0613170-mRNA-1:cds;Parent=Msa0613170-mRNA-1 |
| chr4_2 | CDS | 61812340 | 61812445 | 61812340 | ID=Msa0613170-mRNA-1:cds;Parent=Msa0613170-mRNA-1 |
| chr4_2 | CDS | 61811714 | 61811932 | 61811714 | ID=Msa0613170-mRNA-1:cds;Parent=Msa0613170-mRNA-1 |
| chr4_2 | CDS | 61811050 | 61811134 | 61811050 | ID=Msa0613170-mRNA-1:cds;Parent=Msa0613170-mRNA-1 |
| chr4_2 | CDS | 61810788 | 61811016 | 61810788 | ID=Msa0613170-mRNA-1:cds;Parent=Msa0613170-mRNA-1 |
| chr4_2 | CDS | 61809513 | 61809576 | 61809513 | ID=Msa0613170-mRNA-1:cds;Parent=Msa0613170-mRNA-1 |
| chr4_2 | CDS | 61809295 | 61809403 | 61809295 | ID=Msa0613170-mRNA-1:cds;Parent=Msa0613170-mRNA-1 |
| chr4_2 | CDS | 61809055 | 61809198 | 61809055 | ID=Msa0613170-mRNA-1:cds;Parent=Msa0613170-mRNA-1 |
| chr4_2 | CDS | 61808354 | 61808502 | 61808354 | ID=Msa0613170-mRNA-1:cds;Parent=Msa0613170-mRNA-1 |
| chr4_2 | CDS | 61807465 | 61807627 | 61807465 | ID=Msa0613170-mRNA-1:cds;Parent=Msa0613170-mRNA-1 |
| chr4_2 | CDS | 61807275 | 61807315 | 61807275 | ID=Msa0613170-mRNA-1:cds;Parent=Msa0613170-mRNA-1 |
| chr4_2 | three_prime_UTR | 61807271 | 61807274 | 61807271 | ID=Msa0613170-mRNA-1:three_prime_utr;Parent=Msa0613170-mRNA-1 |
| chr4_2 | three_prime_UTR | 61806143 | 61806454 | 61806143 | ID=Msa0613170-mRNA-1:three_prime_utr;Parent=Msa0613170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
