AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0304310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304310 MtrunA17_Chr2g0332571 99.333 150 1 0 1 150 1 150 6.03e-109 306
Msa0304310 MtrunA17_Chr4g0003811 74.675 154 29 4 1 149 1 149 1.11e-74 219
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304310 AT1G80230.1 61.392 158 42 4 1 140 1 157 1.05e-59 182
Msa0304310 AT3G15640.2 58.491 159 45 4 1 140 1 157 2.53e-52 164
Msa0304310 AT3G15640.1 57.862 159 47 3 1 140 1 158 1.65e-51 162
Msa0304310 AT1G52710.1 59.302 86 35 0 65 150 4 89 2.22e-33 113

Find 109 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGCGTTGCTATCAATTATT+AGG 0.262008 2_3:-61618357 None:intergenic
AGCATGATGTTGTCTGGTTT+TGG 0.271011 2_3:+61616803 Msa0304310:CDS
TGTCCCATGTTTGAATTCTA+AGG 0.300229 2_3:-61618524 None:intergenic
GGAAACTTTGGTTCCTTAAT+CGG 0.319479 2_3:+61618708 Msa0304310:three_prime_UTR
CCGTCACGTGCTAATTCGTT+TGG 0.329404 2_3:+61613916 Msa0304310:five_prime_UTR
TCACGTTGCAATGCTTTGTT+TGG 0.352341 2_3:+61618226 Msa0304310:three_prime_UTR
GGAATGTAAAACAATCTCTT+TGG 0.352887 2_3:-61618191 None:intergenic
CGCGCTCAAGTTTAACTTCA+AGG 0.362659 2_3:-61613940 None:intergenic
ATTAAGCTACAAATCCTGTT+AGG 0.366895 2_3:+61618317 Msa0304310:three_prime_UTR
TTAAATTAAGAGGGAAACTT+TGG 0.368684 2_3:+61618696 Msa0304310:three_prime_UTR
GGGCACTCAAAATCCGATTA+AGG 0.369464 2_3:-61618721 None:intergenic
GACCACCCTGAAGGTCCTTT+TGG 0.374661 2_3:+61615073 Msa0304310:CDS
TTTGAGATCTACGGTGGTTA+CGG 0.386481 2_3:-61614069 None:intergenic
TTCGTGCCAAAAGGACCTTC+AGG 0.388454 2_3:-61615079 None:intergenic
AGTCAAGTCACAACAGTAAC+TGG 0.389318 2_3:-61618606 None:intergenic
CGGCGTCGTTTGATTGGAAA+TGG 0.390861 2_3:-61614049 None:intergenic
GGACCTGGCGGTGATCCTTA+TGG 0.392481 2_3:+61618123 Msa0304310:CDS
CGTCACGTGCTAATTCGTTT+GGG 0.403376 2_3:+61613917 Msa0304310:five_prime_UTR
CGTTCATGACCGGTAGCAAT+TGG 0.405824 2_3:-61614339 None:intergenic
TACTATAACAGAAGGATTGT+TGG 0.415818 2_3:+61616637 Msa0304310:CDS
GGCGACGTGGCGGCTGAGGC+CGG 0.418601 2_3:-61614193 None:intergenic
TATACACCCCACCATCAAAT+GGG 0.419953 2_3:+61613864 None:intergenic
CTATTTGAAATTAAATTAAG+AGG 0.427196 2_3:+61618686 Msa0304310:three_prime_UTR
TGCACACACTGGACATTCAT+GGG 0.432638 2_3:-61616842 None:intergenic
TGGTTACGGCGTCGTTTGAT+TGG 0.435570 2_3:-61614055 None:intergenic
GTGCACACACTGGACATTCA+TGG 0.436671 2_3:-61616843 None:intergenic
GAGAATGAGATGAAGAAGGT+AGG 0.437982 2_3:-61614137 None:intergenic
TGTTGGATGCCCCGGTGGTG+AGG 0.446924 2_3:+61616654 Msa0304310:CDS
CGCCACGTCGCCACACAATC+AGG 0.449393 2_3:+61614204 Msa0304310:CDS
ATATACACCCCACCATCAAA+TGG 0.450852 2_3:+61613863 None:intergenic
CACTTACCACCCTCACCACC+GGG 0.453277 2_3:-61616664 None:intergenic
CTTCAGGGTGGTCTATTTCA+AGG 0.458207 2_3:-61615063 None:intergenic
GGCGGCTGAGGCCGGCGAAT+CGG 0.463992 2_3:-61614185 None:intergenic
ACACTTACCACCCTCACCAC+CGG 0.473884 2_3:-61616665 None:intergenic
GTTGTGACTTGACTGTTGGT+TGG 0.474792 2_3:+61618615 Msa0304310:three_prime_UTR
GTTGGATGCCCCGGTGGTGA+GGG 0.475405 2_3:+61616655 Msa0304310:CDS
TACTGTTGTGACTTGACTGT+TGG 0.480725 2_3:+61618611 Msa0304310:three_prime_UTR
TTTGGAAAATTTATTCCTGA+AGG 0.482002 2_3:-61618173 None:intergenic
GTGTGGCGACGTGGCGGCTG+AGG 0.482725 2_3:-61614197 None:intergenic
TCTGATCAATGGTGTCCATA+AGG 0.484112 2_3:-61618138 None:intergenic
TTACTAACCTTCGTGCCAAA+AGG 0.484133 2_3:-61615088 None:intergenic
CATCCTCGATCCGCCGTCGC+CGG 0.485063 2_3:+61614159 Msa0304310:CDS
AGCCTCCGCTTTGATCCATT+AGG 0.487703 2_3:+61618478 Msa0304310:three_prime_UTR
AGAATGAGATGAAGAAGGTA+GGG 0.490521 2_3:-61614136 None:intergenic
GGTTGTGATTGTAGCTGGTT+CGG 0.494202 2_3:+61614290 Msa0304310:intron
GGATGAGAATGAGATGAAGA+AGG 0.494849 2_3:-61614141 None:intergenic
AGGATGAGCATGATGTTGTC+TGG 0.496376 2_3:+61616797 Msa0304310:CDS
GGCGAATCGGAGACCGGCGA+CGG 0.501941 2_3:-61614172 None:intergenic
CAGCTTGAAGTGGTGGGACC+TGG 0.505788 2_3:+61618108 Msa0304310:intron
TGCGTTACAGCTTGAAGTGG+TGG 0.516079 2_3:+61618101 Msa0304310:intron
GTCGCCGGTCTCCGATTCGC+CGG 0.516296 2_3:+61614174 Msa0304310:CDS
TTCTGTGATTATTTAGACAC+AGG 0.517900 2_3:+61618283 Msa0304310:three_prime_UTR
TGAAAATACTGTGCACACAC+TGG 0.523295 2_3:-61616853 None:intergenic
AAACATCAGTTGGTGGATGA+AGG 0.524412 2_3:-61618565 None:intergenic
AGAAGGATTGTTGGATGCCC+CGG 0.526647 2_3:+61616646 Msa0304310:CDS
GTTTGATTGGAAATGGAAGA+AGG 0.531244 2_3:-61614042 None:intergenic
AAACTGCAGCATCTGATCAA+TGG 0.533620 2_3:-61618149 None:intergenic
TTTAGCACCTATCCACAAAA+GGG 0.535268 2_3:+61618433 Msa0304310:three_prime_UTR
TCGTGCCAAAAGGACCTTCA+GGG 0.538959 2_3:-61615078 None:intergenic
TTAAGTCTTACTATAACAGA+AGG 0.543566 2_3:+61616629 Msa0304310:CDS
ATTCAACACAAAACATCAGT+TGG 0.543800 2_3:-61618575 None:intergenic
GAGGCCGGCGAATCGGAGAC+CGG 0.548914 2_3:-61614178 None:intergenic
TAGTAAGACTTAACAACGGC+AGG 0.550387 2_3:-61616619 None:intergenic
GCGTTACAGCTTGAAGTGGT+GGG 0.554549 2_3:+61618102 Msa0304310:intron
AATCTCCTCACGTTCATGAC+CGG 0.554757 2_3:-61614349 None:intergenic
TATTTGAAATTAAATTAAGA+GGG 0.555579 2_3:+61618687 Msa0304310:three_prime_UTR
AACGATTCTCCGCCACATGA+TGG 0.566084 2_3:-61614094 None:intergenic
GGATGCCCCGGTGGTGAGGG+TGG 0.570608 2_3:+61616658 Msa0304310:CDS
GATGTAGTTCCAATTGCTAC+CGG 0.573966 2_3:+61614330 Msa0304310:CDS
TAGTCCTTAGAATTCAAACA+TGG 0.582114 2_3:+61618520 Msa0304310:three_prime_UTR
CAAACGAATTAGCACGTGAC+GGG 0.584689 2_3:-61613915 None:intergenic
GAATCGGAGACCGGCGACGG+CGG 0.589478 2_3:-61614169 None:intergenic
GGACATGTTAATCCCTCCGT+CGG 0.589725 2_3:+61618542 Msa0304310:three_prime_UTR
AGACCGGCGACGGCGGATCG+AGG 0.592370 2_3:-61614162 None:intergenic
GGTGGATGAAGGCCGACGGA+GGG 0.593535 2_3:-61618554 None:intergenic
CAACACAAAACATCAGTTGG+TGG 0.597609 2_3:-61618572 None:intergenic
TGTCCATAAGGATCACCGCC+AGG 0.601139 2_3:-61618126 None:intergenic
CACCTAATGGATCAAAGCGG+AGG 0.601580 2_3:-61618480 None:intergenic
TCTGTGATTATTTAGACACA+GGG 0.605541 2_3:+61618284 Msa0304310:three_prime_UTR
TAGGTGCTAAAAGTAGCTGC+AGG 0.612310 2_3:-61618421 None:intergenic
ATGATGGTGTTTGAGATCTA+CGG 0.616818 2_3:-61614078 None:intergenic
ATACACCCCACCATCAAATG+GGG 0.619440 2_3:+61613865 None:intergenic
TTCTGCGTTACAGCTTGAAG+TGG 0.625576 2_3:+61618098 Msa0304310:intron
TGGTGGATGAAGGCCGACGG+AGG 0.626007 2_3:-61618555 None:intergenic
TTTGACTGGTCTAGACCTTG+CGG 0.626127 2_3:+61618250 Msa0304310:three_prime_UTR
TGCTACCGGTCATGAACGTG+AGG 0.630864 2_3:+61614344 Msa0304310:CDS
TTCGGTGAAGAAGACAGTTG+AGG 0.641042 2_3:+61614308 Msa0304310:CDS
AGTTGGTGGATGAAGGCCGA+CGG 0.645942 2_3:-61618558 None:intergenic
GGAGATTCAAGCTGATCTTG+AGG 0.651732 2_3:+61614365 Msa0304310:CDS
AGTCCTTAGAATTCAAACAT+GGG 0.652398 2_3:+61618521 Msa0304310:three_prime_UTR
CAAGTCACAACAGTAACTGG+TGG 0.653149 2_3:-61618603 None:intergenic
CTTGAAATAGACCACCCTGA+AGG 0.658668 2_3:+61615064 Msa0304310:CDS
GCACACACTGGACATTCATG+GGG 0.668546 2_3:-61616841 None:intergenic
TACCTGATTGTGTGGCGACG+TGG 0.669661 2_3:-61614206 None:intergenic
CAGAAACTCTCTGAACCGCA+AGG 0.670121 2_3:-61618265 None:intergenic
CCAAACGAATTAGCACGTGA+CGG 0.679687 2_3:-61613916 None:intergenic
CTTGAAGTGGTGGGACCTGG+CGG 0.684429 2_3:+61618111 Msa0304310:CDS
AGATCTCAAACACCATCATG+TGG 0.684707 2_3:+61614082 Msa0304310:exon
AGTGAAGATACCTGATTGTG+TGG 0.687822 2_3:-61614214 None:intergenic
CTGATTGTGTGGCGACGTGG+CGG 0.691244 2_3:-61614203 None:intergenic
TACACCCCACCATCAAATGG+GGG 0.694244 2_3:+61613866 None:intergenic
TCTCAAACACCATCATGTGG+CGG 0.696333 2_3:+61614085 Msa0304310:exon
GTGATTATTTAGACACAGGG+TGG 0.700670 2_3:+61618287 Msa0304310:three_prime_UTR
AGGATTGTTGGATGCCCCGG+TGG 0.708518 2_3:+61616649 Msa0304310:CDS
TGCCAAAAGGACCTTCAGGG+TGG 0.711901 2_3:-61615075 None:intergenic
GTTATAGTAAGACTTAACAA+CGG 0.724381 2_3:-61616623 None:intergenic
ATGGTGTTTGAGATCTACGG+TGG 0.739505 2_3:-61614075 None:intergenic
TTTCACCTAATGGATCAAAG+CGG 0.742764 2_3:-61618483 None:intergenic
ACTTACCACCCTCACCACCG+GGG 0.751343 2_3:-61616663 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTGAAATTAAATTAAGA+GGG + chr2_3:61618687-61618706 Msa0304310:three_prime_UTR 10.0%
!! ACACAAGTTATAAATAAAAA+TGG - chr2_3:61614496-61614515 None:intergenic 15.0%
!!! TGATTTTAAATTTTAATCTG+AGG + chr2_3:61614623-61614642 Msa0304310:intron 15.0%
!! CATTTAAAAACTTTAGTAAT+GGG - chr2_3:61614735-61614754 None:intergenic 15.0%
!! ACATTTAAAAACTTTAGTAA+TGG - chr2_3:61614736-61614755 None:intergenic 15.0%
!!! ACTAAAGTTTTTAAATGTTT+TGG + chr2_3:61614738-61614757 Msa0304310:intron 15.0%
!!! CTAAAGTTTTTAAATGTTTT+GGG + chr2_3:61614739-61614758 Msa0304310:intron 15.0%
!!! TAAAGTTTTTAAATGTTTTG+GGG + chr2_3:61614740-61614759 Msa0304310:intron 15.0%
!!! TTTGTATTTTTTGTTTGTTT+AGG + chr2_3:61615030-61615049 Msa0304310:intron 15.0%
!!! TTGTATTTTTTGTTTGTTTA+GGG + chr2_3:61615031-61615050 Msa0304310:intron 15.0%
!!! AAAATCACTTTTCTAAATTA+AGG - chr2_3:61615278-61615297 None:intergenic 15.0%
!!! TTAATTTAGAAAAGTGATTT+TGG + chr2_3:61615277-61615296 Msa0304310:intron 15.0%
!! TTTATACTTTAATTACCTAA+AGG + chr2_3:61615347-61615366 Msa0304310:intron 15.0%
!! TTATACTTTAATTACCTAAA+GGG + chr2_3:61615348-61615367 Msa0304310:intron 15.0%
!!! TATTTAATCTTTTTGAAGTT+TGG + chr2_3:61615497-61615516 Msa0304310:intron 15.0%
!! ATATATGATAGAACATTATA+GGG + chr2_3:61615608-61615627 Msa0304310:intron 15.0%
!!! ATTTTTGAAGAATGATAATT+TGG - chr2_3:61615831-61615850 None:intergenic 15.0%
!!! ATGTTTATAACTATTTTTAC+TGG + chr2_3:61616891-61616910 Msa0304310:intron 15.0%
!! TAAAATAAATAGGAATATGT+TGG - chr2_3:61617264-61617283 None:intergenic 15.0%
!! GAAAAAGATGTAAAATAAAT+AGG - chr2_3:61617274-61617293 None:intergenic 15.0%
!! TAGAAAAAATTACTTGAAAA+TGG + chr2_3:61617912-61617931 Msa0304310:intron 15.0%
!!! ATTTAACTAGAATTTGAAAT+TGG - chr2_3:61617979-61617998 None:intergenic 15.0%
!!! CTATTTGAAATTAAATTAAG+AGG + chr2_3:61618686-61618705 Msa0304310:three_prime_UTR 15.0%
!!! GATTTTGATGAATTTTGATT+TGG + chr2_3:61614269-61614288 Msa0304310:intron 20.0%
!! ACAAAATGGAAAAATAAAAG+TGG - chr2_3:61614552-61614571 None:intergenic 20.0%
!!! TTTAGTAATGGGATAATAAA+TGG - chr2_3:61614724-61614743 None:intergenic 20.0%
!! TATTTCCAAAACTATAGTAA+TGG + chr2_3:61614802-61614821 Msa0304310:intron 20.0%
!!! TTTGAAATAGCAACTATATT+GGG - chr2_3:61614866-61614885 None:intergenic 20.0%
!!! TTTTGAAATAGCAACTATAT+TGG - chr2_3:61614867-61614886 None:intergenic 20.0%
!!! CATATTATATAGGTTACTTT+TGG + chr2_3:61614987-61615006 Msa0304310:intron 20.0%
!!! AATGGTTTTGGTTTATTTTT+TGG + chr2_3:61615249-61615268 Msa0304310:intron 20.0%
!!! TGTGTTGTTAAAAATCATTA+TGG + chr2_3:61615321-61615340 Msa0304310:intron 20.0%
!!! TTTTATCTTACAATTGAGTA+TGG - chr2_3:61615467-61615486 None:intergenic 20.0%
!! CTCAATTGTAAGATAAAATA+TGG + chr2_3:61615469-61615488 Msa0304310:intron 20.0%
!! AATAGTTTCTCTTTAAACTA+AGG - chr2_3:61615550-61615569 None:intergenic 20.0%
!! GATATATGATAGAACATTAT+AGG + chr2_3:61615607-61615626 Msa0304310:intron 20.0%
!!! TATTTTCTGTCTTTAAACTT+TGG - chr2_3:61616328-61616347 None:intergenic 20.0%
!! AAAGTTTAAAGACAGAAAAT+AGG + chr2_3:61616327-61616346 Msa0304310:intron 20.0%
!! CAAGTCATTCAAATTATTAA+AGG - chr2_3:61617067-61617086 None:intergenic 20.0%
!!! TTTAAATTCTGCACAAATTT+TGG - chr2_3:61617692-61617711 None:intergenic 20.0%
!! AGTCATTTATATGAAAAATG+TGG + chr2_3:61618649-61618668 Msa0304310:three_prime_UTR 20.0%
! ATTCATCAAAATCAAGAACA+AGG - chr2_3:61614262-61614281 None:intergenic 25.0%
! ATATCAGAATAAGAGTAGTT+CGG - chr2_3:61614595-61614614 None:intergenic 25.0%
!!! CTTGTAAGATTTTTCAATCA+TGG + chr2_3:61614662-61614681 Msa0304310:intron 25.0%
! TTGAAATAGCAACTATATTG+GGG - chr2_3:61614865-61614884 None:intergenic 25.0%
! ACATTGTACTAAATAGCATA+TGG + chr2_3:61614888-61614907 Msa0304310:intron 25.0%
! GACAAGACTTCATATTATAT+AGG + chr2_3:61614977-61614996 Msa0304310:intron 25.0%
!!! ATTTTTTGTTTGTTTAGGGA+AGG + chr2_3:61615035-61615054 Msa0304310:intron 25.0%
! ACAATATGAAGAATGAAACA+GGG - chr2_3:61615381-61615400 None:intergenic 25.0%
! TTCATTATTTCAGTTGCAAA+TGG + chr2_3:61615424-61615443 Msa0304310:intron 25.0%
! AAAGACAATGAGAATTAGAT+TGG + chr2_3:61615765-61615784 Msa0304310:intron 25.0%
! TTTGGAGGTAAAAAAATGTT+TGG - chr2_3:61615813-61615832 None:intergenic 25.0%
! TTTGAAGAATGATAATTTGG+AGG - chr2_3:61615828-61615847 None:intergenic 25.0%
!! ATATAGGTATTGTAGATTGA+TGG - chr2_3:61616007-61616026 None:intergenic 25.0%
!! TAAAGATGTTTTATGAAGGT+TGG + chr2_3:61616352-61616371 Msa0304310:intron 25.0%
! TTGAAGTTTCCAAAGTTTAA+AGG + chr2_3:61616316-61616335 Msa0304310:intron 25.0%
!! CACATTTTTCCTTTAAACTT+TGG - chr2_3:61616459-61616478 None:intergenic 25.0%
! TGCTTAAAGATGTATTATGA+AGG + chr2_3:61616477-61616496 Msa0304310:intron 25.0%
! GTTATAGTAAGACTTAACAA+CGG - chr2_3:61616626-61616645 None:intergenic 25.0%
! TTAAGTCTTACTATAACAGA+AGG + chr2_3:61616629-61616648 Msa0304310:CDS 25.0%
!!! AACTTGTTTTTTTAATGCAG+AGG + chr2_3:61616777-61616796 Msa0304310:intron 25.0%
! ACATTTAACTCAATTGATCT+TGG - chr2_3:61616920-61616939 None:intergenic 25.0%
!!! TGTCAAAACACAGATTTTTT+AGG - chr2_3:61617033-61617052 None:intergenic 25.0%
! TTATCTGACAATTGATTGTT+TGG + chr2_3:61617104-61617123 Msa0304310:intron 25.0%
! AAGGATCTTATAATTAGGAA+TGG - chr2_3:61617172-61617191 None:intergenic 25.0%
! GTCAAAAGGATCTTATAATT+AGG - chr2_3:61617177-61617196 None:intergenic 25.0%
! GGACTAATAAAATTGTCAAA+AGG - chr2_3:61617191-61617210 None:intergenic 25.0%
! TAAAGTAACTCTTTCTCATA+TGG + chr2_3:61617326-61617345 Msa0304310:intron 25.0%
! AAAGTAACTCTTTCTCATAT+GGG + chr2_3:61617327-61617346 Msa0304310:intron 25.0%
! ATTACGGGAATTAAGAAAAT+TGG - chr2_3:61617401-61617420 None:intergenic 25.0%
!! TTTTCTTAATTCCCGTAATT+TGG + chr2_3:61617402-61617421 Msa0304310:intron 25.0%
!!! TAACTCGTCAATTATTTTAG+AGG - chr2_3:61617593-61617612 None:intergenic 25.0%
!! AGTTAGAGAAATGAATGTTT+TGG + chr2_3:61617608-61617627 Msa0304310:intron 25.0%
! TGTTTGATATAAAGAAACCA+CGG + chr2_3:61617774-61617793 Msa0304310:intron 25.0%
! ATTTAAATAATATGGACGAG+AGG - chr2_3:61617864-61617883 None:intergenic 25.0%
!!! CTGCACTGATTTAAATAATA+TGG - chr2_3:61617872-61617891 None:intergenic 25.0%
! GAAAATGGAATAAGAATAGT+TGG + chr2_3:61617927-61617946 Msa0304310:intron 25.0%
!!! GTGGTGCTAATTAATTTTTT+TGG + chr2_3:61618075-61618094 Msa0304310:intron 25.0%
! TTTGGAAAATTTATTCCTGA+AGG - chr2_3:61618176-61618195 None:intergenic 25.0%
! TTAAATTAAGAGGGAAACTT+TGG + chr2_3:61618696-61618715 Msa0304310:three_prime_UTR 25.0%
!! GATTTTTCAATCATGGATAG+CGG + chr2_3:61614669-61614688 Msa0304310:intron 30.0%
TTGGGGTGAATAAAAAGATT+TGG + chr2_3:61614757-61614776 Msa0304310:intron 30.0%
TTCCAAAACTATAGTAATGG+AGG + chr2_3:61614805-61614824 Msa0304310:intron 30.0%
! TTCCTCCATTACTATAGTTT+TGG - chr2_3:61614810-61614829 None:intergenic 30.0%
! TATAGTAATGGAGGAAATGT+AGG + chr2_3:61614814-61614833 Msa0304310:intron 30.0%
GAAATGTAGGCAATAGAAAA+TGG + chr2_3:61614827-61614846 Msa0304310:intron 30.0%
TTGTACTAAATAGCATATGG+TGG + chr2_3:61614891-61614910 Msa0304310:intron 30.0%
ACAATTATATATGCAAGCTG+AGG + chr2_3:61615128-61615147 Msa0304310:intron 30.0%
TTGGCAAAACTAATGTTGTT+TGG + chr2_3:61615296-61615315 Msa0304310:intron 30.0%
GACAATATGAAGAATGAAAC+AGG - chr2_3:61615382-61615401 None:intergenic 30.0%
! CAGTGCTTCTGTTAATTTTA+TGG - chr2_3:61615896-61615915 None:intergenic 30.0%
AAATTGCAAAGACATGTAGA+AGG + chr2_3:61615949-61615968 Msa0304310:intron 30.0%
GCTTCTGTATCGAATTATAT+AGG - chr2_3:61616023-61616042 None:intergenic 30.0%
TGCTTACATTGGATATTCTT+TGG + chr2_3:61616134-61616153 Msa0304310:intron 30.0%
TGAGGATATTGGTAAATTGT+TGG + chr2_3:61616166-61616185 Msa0304310:intron 30.0%
TACTATAACAGAAGGATTGT+TGG + chr2_3:61616637-61616656 Msa0304310:CDS 30.0%
TGGTGATAAGTACTAGAATT+TGG + chr2_3:61616733-61616752 Msa0304310:intron 30.0%
GATCTTATAATTAGGAATGG+AGG - chr2_3:61617169-61617188 None:intergenic 30.0%
CCAAAGAGATCTTATGAAAA+GGG - chr2_3:61617212-61617231 None:intergenic 30.0%
ACCAAAGAGATCTTATGAAA+AGG - chr2_3:61617213-61617232 None:intergenic 30.0%
ATATATGTCACTGTCATAGA+GGG - chr2_3:61617494-61617513 None:intergenic 30.0%
TATATATGTCACTGTCATAG+AGG - chr2_3:61617495-61617514 None:intergenic 30.0%
ACAAAACATAAGCTCAGATA+TGG - chr2_3:61617757-61617776 None:intergenic 30.0%
ATACAGATGACCATTTCAAA+TGG + chr2_3:61617997-61618016 Msa0304310:intron 30.0%
TACAGATGACCATTTCAAAT+GGG + chr2_3:61617998-61618017 Msa0304310:intron 30.0%
!!! TTTTGCATTACAGCTTTAAG+TGG + chr2_3:61618056-61618075 Msa0304310:intron 30.0%
GGAATGTAAAACAATCTCTT+TGG - chr2_3:61618194-61618213 None:intergenic 30.0%
TTCTGTGATTATTTAGACAC+AGG + chr2_3:61618283-61618302 Msa0304310:three_prime_UTR 30.0%
TCTGTGATTATTTAGACACA+GGG + chr2_3:61618284-61618303 Msa0304310:three_prime_UTR 30.0%
ATTAAGCTACAAATCCTGTT+AGG + chr2_3:61618317-61618336 Msa0304310:three_prime_UTR 30.0%
TAGCGTTGCTATCAATTATT+AGG - chr2_3:61618360-61618379 None:intergenic 30.0%
TAGTCCTTAGAATTCAAACA+TGG + chr2_3:61618520-61618539 Msa0304310:three_prime_UTR 30.0%
AGTCCTTAGAATTCAAACAT+GGG + chr2_3:61618521-61618540 Msa0304310:three_prime_UTR 30.0%
ATTCAACACAAAACATCAGT+TGG - chr2_3:61618578-61618597 None:intergenic 30.0%
TAAATCAAACCCCCATTTGA+TGG - chr2_3:61613878-61613897 None:intergenic 35.0%
! CAAATGGGGGTTTGATTTAT+TGG + chr2_3:61613879-61613898 Msa0304310:five_prime_UTR 35.0%
GTTTGATTGGAAATGGAAGA+AGG - chr2_3:61614045-61614064 None:intergenic 35.0%
! ATGATGGTGTTTGAGATCTA+CGG - chr2_3:61614081-61614100 None:intergenic 35.0%
AGAATGAGATGAAGAAGGTA+GGG - chr2_3:61614139-61614158 None:intergenic 35.0%
GGCATAGGAAATTGACAAAA+TGG - chr2_3:61614566-61614585 None:intergenic 35.0%
ATAAGAGTAGTTCGGATTCA+AGG - chr2_3:61614587-61614606 None:intergenic 35.0%
ATAGCAACTATATTGGGGTT+AGG - chr2_3:61614860-61614879 None:intergenic 35.0%
CAACTAATTCACACACACAT+AGG - chr2_3:61615198-61615217 None:intergenic 35.0%
! GTGTGAATTAGTTGTTTCCA+AGG + chr2_3:61615204-61615223 Msa0304310:intron 35.0%
!! TTCCAAGGTTGATTTTGATG+TGG + chr2_3:61615219-61615238 Msa0304310:intron 35.0%
!! TCCAAGGTTGATTTTGATGT+GGG + chr2_3:61615220-61615239 Msa0304310:intron 35.0%
TAAGAAAGACCCAGAGATTA+AGG + chr2_3:61615569-61615588 Msa0304310:intron 35.0%
CAATCAACTCCTTAATCTCT+GGG - chr2_3:61615581-61615600 None:intergenic 35.0%
TCAATCAACTCCTTAATCTC+TGG - chr2_3:61615582-61615601 None:intergenic 35.0%
GATCTTATAATACCATCCCT+AGG - chr2_3:61615744-61615763 None:intergenic 35.0%
! ATTCTTTGGAAGTAAGCATG+AGG + chr2_3:61616148-61616167 Msa0304310:intron 35.0%
! GGCGTAAAGATGTTTTATGA+AGG + chr2_3:61616348-61616367 Msa0304310:intron 35.0%
TAACATGGCTGGAAAATCAA+GGG + chr2_3:61616382-61616401 Msa0304310:intron 35.0%
AAGACATGTATTAGACAACG+TGG - chr2_3:61616553-61616572 None:intergenic 35.0%
ACAGATTCGTAAAGAAAGAC+AGG - chr2_3:61616693-61616712 None:intergenic 35.0%
CTTATCACCAGATTGTGAAA+AGG - chr2_3:61616723-61616742 None:intergenic 35.0%
ATTATTGCCCTCAACTTTCA+CGG + chr2_3:61616986-61617005 Msa0304310:intron 35.0%
GTATACATTAAACAGCGACA+AGG - chr2_3:61617144-61617163 None:intergenic 35.0%
! CCCTTTTCATAAGATCTCTT+TGG + chr2_3:61617209-61617228 Msa0304310:intron 35.0%
!!! GAAATGAATGTTTTGGCACT+AGG + chr2_3:61617615-61617634 Msa0304310:intron 35.0%
!!! TCTGCACAAATTTTGGCTAA+AGG - chr2_3:61617685-61617704 None:intergenic 35.0%
CATGCATAAAATTCCTCCAT+GGG + chr2_3:61617823-61617842 Msa0304310:intron 35.0%
ATGCATAAAATTCCTCCATG+GGG + chr2_3:61617824-61617843 Msa0304310:intron 35.0%
TAAATAATATGGACGAGAGG+TGG - chr2_3:61617861-61617880 None:intergenic 35.0%
! AGTAAAGCACCCATTTGAAA+TGG - chr2_3:61618010-61618029 None:intergenic 35.0%
! CATTGCAACGTGATTTTGAA+AGG - chr2_3:61618219-61618238 None:intergenic 35.0%
!!! ATGCTTTGTTTGGTTTTGAC+TGG + chr2_3:61618236-61618255 Msa0304310:three_prime_UTR 35.0%
!!! TCCTGTTAGGTTGTCATTTT+TGG + chr2_3:61618330-61618349 Msa0304310:three_prime_UTR 35.0%
ACCAAAAATGACAACCTAAC+AGG - chr2_3:61618334-61618353 None:intergenic 35.0%
! TTTTAGCACCTATCCACAAA+AGG + chr2_3:61618432-61618451 Msa0304310:three_prime_UTR 35.0%
TTTAGCACCTATCCACAAAA+GGG + chr2_3:61618433-61618452 Msa0304310:three_prime_UTR 35.0%
! TAAACTTGTAGTCCCTTTTG+TGG - chr2_3:61618448-61618467 None:intergenic 35.0%
! TTTCACCTAATGGATCAAAG+CGG - chr2_3:61618486-61618505 None:intergenic 35.0%
!!! TTGACTGCTTTTTCACCTAA+TGG - chr2_3:61618496-61618515 None:intergenic 35.0%
TGTCCCATGTTTGAATTCTA+AGG - chr2_3:61618527-61618546 None:intergenic 35.0%
TGAAAAATGTGGAGACAATC+TGG + chr2_3:61618660-61618679 Msa0304310:three_prime_UTR 35.0%
! GGAAACTTTGGTTCCTTAAT+CGG + chr2_3:61618708-61618727 Msa0304310:three_prime_UTR 35.0%
! TTTGAGATCTACGGTGGTTA+CGG - chr2_3:61614072-61614091 None:intergenic 40.0%
AGATCTCAAACACCATCATG+TGG + chr2_3:61614082-61614101 Msa0304310:exon 40.0%
! ATGAAGAAGGTAGGGTTTTG+AGG - chr2_3:61614131-61614150 None:intergenic 40.0%
GAGAATGAGATGAAGAAGGT+AGG - chr2_3:61614140-61614159 None:intergenic 40.0%
GGATGAGAATGAGATGAAGA+AGG - chr2_3:61614144-61614163 None:intergenic 40.0%
AGTGAAGATACCTGATTGTG+TGG - chr2_3:61614217-61614236 None:intergenic 40.0%
! GATTTGGTTGTGATTGTAGC+TGG + chr2_3:61614285-61614304 Msa0304310:intron 40.0%
GATGTAGTTCCAATTGCTAC+CGG + chr2_3:61614330-61614349 Msa0304310:CDS 40.0%
GAAAACCACTATAGCGAGTT+AGG + chr2_3:61614691-61614710 Msa0304310:intron 40.0%
AGTATCCTAACTCGCTATAG+TGG - chr2_3:61614699-61614718 None:intergenic 40.0%
GTAGGCAATAGAAAATGGAG+AGG + chr2_3:61614832-61614851 Msa0304310:intron 40.0%
! AGCATATGGTGGAACAATAG+TGG + chr2_3:61614902-61614921 Msa0304310:intron 40.0%
! GTGGAACAATAGTGGTTTGT+TGG + chr2_3:61614910-61614929 Msa0304310:intron 40.0%
CTATAAGCGCTATACCTCTA+TGG - chr2_3:61614948-61614967 None:intergenic 40.0%
TTACTAACCTTCGTGCCAAA+AGG - chr2_3:61615091-61615110 None:intergenic 40.0%
ACCCACATCAAAATCAACCT+TGG - chr2_3:61615224-61615243 None:intergenic 40.0%
!! GTTGATTTTGATGTGGGTTG+CGG + chr2_3:61615226-61615245 Msa0304310:intron 40.0%
! GGCTTGGTTGTTGTTGTATA+CGG + chr2_3:61615670-61615689 Msa0304310:intron 40.0%
GTTATAACTCAGTGAAGGGT+AGG - chr2_3:61615711-61615730 None:intergenic 40.0%
! GGGTGTTATAACTCAGTGAA+GGG - chr2_3:61615715-61615734 None:intergenic 40.0%
! TGGGTGTTATAACTCAGTGA+AGG - chr2_3:61615716-61615735 None:intergenic 40.0%
TTATAACACCCAAGTCTCCT+AGG + chr2_3:61615724-61615743 Msa0304310:intron 40.0%
TATAACACCCAAGTCTCCTA+GGG + chr2_3:61615725-61615744 Msa0304310:intron 40.0%
TCGATACAGAAGCAATCTTC+TGG + chr2_3:61616030-61616049 Msa0304310:intron 40.0%
GGATGCTAAGTTGCTTACAT+TGG + chr2_3:61616123-61616142 Msa0304310:intron 40.0%
GGAAGTAAGCATGAGGATAT+TGG + chr2_3:61616155-61616174 Msa0304310:intron 40.0%
!! GAGGATAGCAACTTGTTAAC+AGG - chr2_3:61616193-61616212 None:intergenic 40.0%
CTCAATTACTTCACCGTACT+CGG + chr2_3:61616210-61616229 Msa0304310:intron 40.0%
!! AAGGTTGGTGAAGAGTAACA+TGG + chr2_3:61616367-61616386 Msa0304310:intron 40.0%
GTAACATGGCTGGAAAATCA+AGG + chr2_3:61616381-61616400 Msa0304310:intron 40.0%
AACATGGCTGGAAAATCAAG+GGG + chr2_3:61616383-61616402 Msa0304310:intron 40.0%
TGTCTGCTTTCGCTGTTTAT+AGG + chr2_3:61616591-61616610 Msa0304310:intron 40.0%
TAGTAAGACTTAACAACGGC+AGG - chr2_3:61616622-61616641 None:intergenic 40.0%
! GTGCAAACCTTTTCACAATC+TGG + chr2_3:61616713-61616732 Msa0304310:intron 40.0%
!! AGCATGATGTTGTCTGGTTT+TGG + chr2_3:61616803-61616822 Msa0304310:CDS 40.0%
TGAAAATACTGTGCACACAC+TGG - chr2_3:61616856-61616875 None:intergenic 40.0%
! AGTGTGTGCACAGTATTTTC+AGG + chr2_3:61616855-61616874 Msa0304310:CDS 40.0%
ATGAAGTCCGTGAAAGTTGA+GGG - chr2_3:61616996-61617015 None:intergenic 40.0%
TATGAAGTCCGTGAAAGTTG+AGG - chr2_3:61616997-61617016 None:intergenic 40.0%
TCAACTTTCACGGACTTCAT+AGG + chr2_3:61616996-61617015 Msa0304310:intron 40.0%
ATTCCCGTAATTTGGCCAAA+AGG + chr2_3:61617410-61617429 Msa0304310:intron 40.0%
TTCCCGTAATTTGGCCAAAA+GGG + chr2_3:61617411-61617430 Msa0304310:intron 40.0%
GCATGCATAAAATTCCTCCA+TGG + chr2_3:61617822-61617841 Msa0304310:intron 40.0%
GCTATATATATTCCCCATGG+AGG - chr2_3:61617839-61617858 None:intergenic 40.0%
GTGGCTATATATATTCCCCA+TGG - chr2_3:61617842-61617861 None:intergenic 40.0%
TCTGATCAATGGTGTCCATA+AGG - chr2_3:61618141-61618160 None:intergenic 40.0%
AAACTGCAGCATCTGATCAA+TGG - chr2_3:61618152-61618171 None:intergenic 40.0%
!! GCAACGTGATTTTGAAAGGT+AGG - chr2_3:61618215-61618234 None:intergenic 40.0%
! TCACGTTGCAATGCTTTGTT+TGG + chr2_3:61618226-61618245 Msa0304310:three_prime_UTR 40.0%
GTGATTATTTAGACACAGGG+TGG + chr2_3:61618287-61618306 Msa0304310:three_prime_UTR 40.0%
! TTGTAGTCCCTTTTGTGGAT+AGG - chr2_3:61618443-61618462 None:intergenic 40.0%
!! AAACATCAGTTGGTGGATGA+AGG - chr2_3:61618568-61618587 None:intergenic 40.0%
CAACACAAAACATCAGTTGG+TGG - chr2_3:61618575-61618594 None:intergenic 40.0%
AGTCAAGTCACAACAGTAAC+TGG - chr2_3:61618609-61618628 None:intergenic 40.0%
TACTGTTGTGACTTGACTGT+TGG + chr2_3:61618611-61618630 Msa0304310:three_prime_UTR 40.0%
! TCAAACCCCCATTTGATGGT+GGG - chr2_3:61613874-61613893 None:intergenic 45.0%
ATCAAACCCCCATTTGATGG+TGG - chr2_3:61613875-61613894 None:intergenic 45.0%
CAAACGAATTAGCACGTGAC+GGG - chr2_3:61613918-61613937 None:intergenic 45.0%
CCAAACGAATTAGCACGTGA+CGG - chr2_3:61613919-61613938 None:intergenic 45.0%
CGTCACGTGCTAATTCGTTT+GGG + chr2_3:61613917-61613936 Msa0304310:five_prime_UTR 45.0%
! CGCGCTCAAGTTTAACTTCA+AGG - chr2_3:61613943-61613962 None:intergenic 45.0%
! ATGGTGTTTGAGATCTACGG+TGG - chr2_3:61614078-61614097 None:intergenic 45.0%
TCTCAAACACCATCATGTGG+CGG + chr2_3:61614085-61614104 Msa0304310:exon 45.0%
GGTTGTGATTGTAGCTGGTT+CGG + chr2_3:61614290-61614309 Msa0304310:intron 45.0%
TTCGGTGAAGAAGACAGTTG+AGG + chr2_3:61614308-61614327 Msa0304310:CDS 45.0%
AATCTCCTCACGTTCATGAC+CGG - chr2_3:61614352-61614371 None:intergenic 45.0%
GGAGATTCAAGCTGATCTTG+AGG + chr2_3:61614365-61614384 Msa0304310:CDS 45.0%
GTAGTTCGGATTCAAGGCAT+AGG - chr2_3:61614581-61614600 None:intergenic 45.0%
GGAATTCTGCTACACCATAG+AGG + chr2_3:61614931-61614950 Msa0304310:intron 45.0%
CTTCAGGGTGGTCTATTTCA+AGG - chr2_3:61615066-61615085 None:intergenic 45.0%
CTTGAAATAGACCACCCTGA+AGG + chr2_3:61615064-61615083 Msa0304310:CDS 45.0%
!! TTTTGATGTGGGTTGCGGAA+TGG + chr2_3:61615231-61615250 Msa0304310:intron 45.0%
AACAGGGACTCATACCCTTT+AGG - chr2_3:61615365-61615384 None:intergenic 45.0%
! GGTTGGCTACATGGATCAAA+CGG - chr2_3:61615634-61615653 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGCA+GGG - chr2_3:61615655-61615674 None:intergenic 45.0%
AAGGGTAGGTAGGAAGACTA+GGG - chr2_3:61615697-61615716 None:intergenic 45.0%
TAACTCAGTGAAGGGTAGGT+AGG - chr2_3:61615707-61615726 None:intergenic 45.0%
ATACCATCCCTAGGAGACTT+GGG - chr2_3:61615735-61615754 None:intergenic 45.0%
AATACCATCCCTAGGAGACT+TGG - chr2_3:61615736-61615755 None:intergenic 45.0%
TGCAAAGACATGTAGAAGGC+TGG + chr2_3:61615953-61615972 Msa0304310:intron 45.0%
CGAGTACGGTGAAGTAATTG+AGG - chr2_3:61616212-61616231 None:intergenic 45.0%
TCACCTCTTACAACCGAGTA+CGG - chr2_3:61616226-61616245 None:intergenic 45.0%
TAAGAGGTGAAGAGTAACCG+TGG + chr2_3:61616236-61616255 Msa0304310:intron 45.0%
TAACCGTGGCTGGAAAATCA+AGG + chr2_3:61616250-61616269 Msa0304310:intron 45.0%
AACCGTGGCTGGAAAATCAA+GGG + chr2_3:61616251-61616270 Msa0304310:intron 45.0%
TTGGTGAAGAGTAACATGGC+TGG + chr2_3:61616371-61616390 Msa0304310:intron 45.0%
AGGATGAGCATGATGTTGTC+TGG + chr2_3:61616797-61616816 Msa0304310:CDS 45.0%
!!! TGATGTTGTCTGGTTTTGGC+TGG + chr2_3:61616807-61616826 Msa0304310:CDS 45.0%
TGCACACACTGGACATTCAT+GGG - chr2_3:61616845-61616864 None:intergenic 45.0%
! GACCCTTTTGGCCAAATTAC+GGG - chr2_3:61617416-61617435 None:intergenic 45.0%
! GGACCCTTTTGGCCAAATTA+CGG - chr2_3:61617417-61617436 None:intergenic 45.0%
GCCAAAAGGGTCCTATAGTT+GGG + chr2_3:61617424-61617443 Msa0304310:intron 45.0%
CCAAAAGGGTCCTATAGTTG+GGG + chr2_3:61617425-61617444 Msa0304310:intron 45.0%
CTACATCGATCCCCAACTAT+AGG - chr2_3:61617438-61617457 None:intergenic 45.0%
GCATTCATGAGTGATGACAC+TGG - chr2_3:61617728-61617747 None:intergenic 45.0%
TTCTGCGTTACAGCTTGAAG+TGG + chr2_3:61618098-61618117 Msa0304310:intron 45.0%
! AGATGCTGCAGTTTTCCTTC+AGG + chr2_3:61618158-61618177 Msa0304310:three_prime_UTR 45.0%
!! TTTGACTGGTCTAGACCTTG+CGG + chr2_3:61618250-61618269 Msa0304310:three_prime_UTR 45.0%
TAGGTGCTAAAAGTAGCTGC+AGG - chr2_3:61618424-61618443 None:intergenic 45.0%
CAAGTCACAACAGTAACTGG+TGG - chr2_3:61618606-61618625 None:intergenic 45.0%
GTTGTGACTTGACTGTTGGT+TGG + chr2_3:61618615-61618634 Msa0304310:three_prime_UTR 45.0%
GGGCACTCAAAATCCGATTA+AGG - chr2_3:61618724-61618743 None:intergenic 45.0%
!! TGTATTAAATATATTAAATT+TGG + chr2_3:61616102-61616121 Msa0304310:intron 5.0%
!! CAAACCCCCATTTGATGGTG+GGG - chr2_3:61613873-61613892 None:intergenic 50.0%
CCGTCACGTGCTAATTCGTT+TGG + chr2_3:61613916-61613935 Msa0304310:five_prime_UTR 50.0%
CGGCGTCGTTTGATTGGAAA+TGG - chr2_3:61614052-61614071 None:intergenic 50.0%
TGGTTACGGCGTCGTTTGAT+TGG - chr2_3:61614058-61614077 None:intergenic 50.0%
AACGATTCTCCGCCACATGA+TGG - chr2_3:61614097-61614116 None:intergenic 50.0%
!!! GAAGGTAGGGTTTTGAGGTG+AGG - chr2_3:61614126-61614145 None:intergenic 50.0%
CGTTCATGACCGGTAGCAAT+TGG - chr2_3:61614342-61614361 None:intergenic 50.0%
TCGTGCCAAAAGGACCTTCA+GGG - chr2_3:61615081-61615100 None:intergenic 50.0%
TTCGTGCCAAAAGGACCTTC+AGG - chr2_3:61615082-61615101 None:intergenic 50.0%
! TGAAGGTCCTTTTGGCACGA+AGG + chr2_3:61615081-61615100 Msa0304310:CDS 50.0%
!! TGTGGGTTGCGGAATGGTTT+TGG + chr2_3:61615237-61615256 Msa0304310:intron 50.0%
!! ACTAAGCAGGGTTGGCTACA+TGG - chr2_3:61615643-61615662 None:intergenic 50.0%
ATGTAGCCAACCCTGCTTAG+TGG + chr2_3:61615642-61615661 Msa0304310:intron 50.0%
TGTAGCCAACCCTGCTTAGT+GGG + chr2_3:61615643-61615662 Msa0304310:intron 50.0%
CTTATCCCACTAAGCAGGGT+TGG - chr2_3:61615651-61615670 None:intergenic 50.0%
CAACCCTGCTTAGTGGGATA+AGG + chr2_3:61615649-61615668 Msa0304310:intron 50.0%
! CAAGCCTTATCCCACTAAGC+AGG - chr2_3:61615656-61615675 None:intergenic 50.0%
CTGCTTAGTGGGATAAGGCT+TGG + chr2_3:61615654-61615673 Msa0304310:intron 50.0%
GAAGGGTAGGTAGGAAGACT+AGG - chr2_3:61615698-61615717 None:intergenic 50.0%
TCACCGTACTCGGTTGTAAG+AGG + chr2_3:61616220-61616239 Msa0304310:intron 50.0%
ACCGTGGCTGGAAAATCAAG+GGG + chr2_3:61616252-61616271 Msa0304310:intron 50.0%
! ACCCCTTGATTTTCCAGCCA+CGG - chr2_3:61616256-61616275 None:intergenic 50.0%
AGAAGGATTGTTGGATGCCC+CGG + chr2_3:61616646-61616665 Msa0304310:CDS 50.0%
!!! TGTTGTCTGGTTTTGGCTGG+AGG + chr2_3:61616810-61616829 Msa0304310:CDS 50.0%
GCACACACTGGACATTCATG+GGG - chr2_3:61616844-61616863 None:intergenic 50.0%
GTGCACACACTGGACATTCA+TGG - chr2_3:61616846-61616865 None:intergenic 50.0%
GGCCAAAAGGGTCCTATAGT+TGG + chr2_3:61617423-61617442 Msa0304310:intron 50.0%
! CCCCAACTATAGGACCCTTT+TGG - chr2_3:61617428-61617447 None:intergenic 50.0%
TGTCAGCATACACTACACCG+TGG - chr2_3:61617794-61617813 None:intergenic 50.0%
TGCGTTACAGCTTGAAGTGG+TGG + chr2_3:61618101-61618120 Msa0304310:intron 50.0%
GCGTTACAGCTTGAAGTGGT+GGG + chr2_3:61618102-61618121 Msa0304310:intron 50.0%
CAGAAACTCTCTGAACCGCA+AGG - chr2_3:61618268-61618287 None:intergenic 50.0%
AGCCTCCGCTTTGATCCATT+AGG + chr2_3:61618478-61618497 Msa0304310:three_prime_UTR 50.0%
! CACCTAATGGATCAAAGCGG+AGG - chr2_3:61618483-61618502 None:intergenic 50.0%
GGACATGTTAATCCCTCCGT+CGG + chr2_3:61618542-61618561 Msa0304310:three_prime_UTR 50.0%
TACCTGATTGTGTGGCGACG+TGG - chr2_3:61614209-61614228 None:intergenic 55.0%
TGCTACCGGTCATGAACGTG+AGG + chr2_3:61614344-61614363 Msa0304310:CDS 55.0%
! GACCACCCTGAAGGTCCTTT+TGG + chr2_3:61615073-61615092 Msa0304310:CDS 55.0%
TGCCAAAAGGACCTTCAGGG+TGG - chr2_3:61615078-61615097 None:intergenic 55.0%
ACACCCAAGTCTCCTAGGGA+TGG + chr2_3:61615729-61615748 Msa0304310:intron 55.0%
AGGTGAAGAGTAACCGTGGC+TGG + chr2_3:61616240-61616259 Msa0304310:intron 55.0%
ACACTTACCACCCTCACCAC+CGG - chr2_3:61616668-61616687 None:intergenic 55.0%
!!! GTCTGGTTTTGGCTGGAGGA+AGG + chr2_3:61616814-61616833 Msa0304310:CDS 55.0%
TGTCCATAAGGATCACCGCC+AGG - chr2_3:61618129-61618148 None:intergenic 55.0%
!! AGTTGGTGGATGAAGGCCGA+CGG - chr2_3:61618561-61618580 None:intergenic 55.0%
CTGATTGTGTGGCGACGTGG+CGG - chr2_3:61614206-61614225 None:intergenic 60.0%
AGGATTGTTGGATGCCCCGG+TGG + chr2_3:61616649-61616668 Msa0304310:CDS 60.0%
ACTTACCACCCTCACCACCG+GGG - chr2_3:61616666-61616685 None:intergenic 60.0%
CACTTACCACCCTCACCACC+GGG - chr2_3:61616667-61616686 None:intergenic 60.0%
! CAGCTTGAAGTGGTGGGACC+TGG + chr2_3:61618108-61618127 Msa0304310:intron 60.0%
! CTTGAAGTGGTGGGACCTGG+CGG + chr2_3:61618111-61618130 Msa0304310:CDS 60.0%
GGACCTGGCGGTGATCCTTA+TGG + chr2_3:61618123-61618142 Msa0304310:CDS 60.0%
CGCCACGTCGCCACACAATC+AGG + chr2_3:61614204-61614223 Msa0304310:CDS 65.0%
TGTTGGATGCCCCGGTGGTG+AGG + chr2_3:61616654-61616673 Msa0304310:CDS 65.0%
GTTGGATGCCCCGGTGGTGA+GGG + chr2_3:61616655-61616674 Msa0304310:CDS 65.0%
GGTGGATGAAGGCCGACGGA+GGG - chr2_3:61618557-61618576 None:intergenic 65.0%
! TGGTGGATGAAGGCCGACGG+AGG - chr2_3:61618558-61618577 None:intergenic 65.0%
CATCCTCGATCCGCCGTCGC+CGG + chr2_3:61614159-61614178 Msa0304310:CDS 70.0%
GAATCGGAGACCGGCGACGG+CGG - chr2_3:61614172-61614191 None:intergenic 70.0%
GGCGAATCGGAGACCGGCGA+CGG - chr2_3:61614175-61614194 None:intergenic 70.0%
! GTCGCCGGTCTCCGATTCGC+CGG + chr2_3:61614174-61614193 Msa0304310:CDS 70.0%
GAGGCCGGCGAATCGGAGAC+CGG - chr2_3:61614181-61614200 None:intergenic 70.0%
AGACCGGCGACGGCGGATCG+AGG - chr2_3:61614165-61614184 None:intergenic 75.0%
GGCGGCTGAGGCCGGCGAAT+CGG - chr2_3:61614188-61614207 None:intergenic 75.0%
GTGTGGCGACGTGGCGGCTG+AGG - chr2_3:61614200-61614219 None:intergenic 75.0%
GGATGCCCCGGTGGTGAGGG+TGG + chr2_3:61616658-61616677 Msa0304310:CDS 75.0%
! GGCGACGTGGCGGCTGAGGC+CGG - chr2_3:61614196-61614215 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 61613868 61618746 61613868 ID=Msa0304310;Name=Msa0304310
chr2_3 mRNA 61613868 61618746 61613868 ID=Msa0304310-mRNA-1;Parent=Msa0304310;Name=Msa0304310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=231|1|1|1|1|1|6|591|150
chr2_3 exon 61613868 61614225 61613868 ID=Msa0304310-mRNA-1:exon:20417;Parent=Msa0304310-mRNA-1
chr2_3 exon 61614304 61614386 61614304 ID=Msa0304310-mRNA-1:exon:20418;Parent=Msa0304310-mRNA-1
chr2_3 exon 61615052 61615102 61615052 ID=Msa0304310-mRNA-1:exon:20419;Parent=Msa0304310-mRNA-1
chr2_3 exon 61616613 61616679 61616613 ID=Msa0304310-mRNA-1:exon:20420;Parent=Msa0304310-mRNA-1
chr2_3 exon 61616797 61616876 61616797 ID=Msa0304310-mRNA-1:exon:20421;Parent=Msa0304310-mRNA-1
chr2_3 exon 61618111 61618746 61618111 ID=Msa0304310-mRNA-1:exon:20422;Parent=Msa0304310-mRNA-1
chr2_3 five_prime_UTR 61613868 61614098 61613868 ID=Msa0304310-mRNA-1:five_prime_utr;Parent=Msa0304310-mRNA-1
chr2_3 CDS 61614099 61614225 61614099 ID=Msa0304310-mRNA-1:cds;Parent=Msa0304310-mRNA-1
chr2_3 CDS 61614304 61614386 61614304 ID=Msa0304310-mRNA-1:cds;Parent=Msa0304310-mRNA-1
chr2_3 CDS 61615052 61615102 61615052 ID=Msa0304310-mRNA-1:cds;Parent=Msa0304310-mRNA-1
chr2_3 CDS 61616613 61616679 61616613 ID=Msa0304310-mRNA-1:cds;Parent=Msa0304310-mRNA-1
chr2_3 CDS 61616797 61616876 61616797 ID=Msa0304310-mRNA-1:cds;Parent=Msa0304310-mRNA-1
chr2_3 CDS 61618111 61618155 61618111 ID=Msa0304310-mRNA-1:cds;Parent=Msa0304310-mRNA-1
chr2_3 three_prime_UTR 61618156 61618746 61618156 ID=Msa0304310-mRNA-1:three_prime_utr;Parent=Msa0304310-mRNA-1
Gene Sequence

>Msa0304310

ATGTGGCGGAGAATCGTTTCTTCTCCTCACCTCAAAACCCTACCTTCTTCATCTCATTCTCATCCTCGATCCGCCGTCGCCGGTCTCCGATTCGCCGGCCTCAGCCGCCACGTCGCCACACAATCAGCTGGTTCGGTGAAGAAGACAGTTGAGGATGTAGTTCCAATTGCTACCGGTCATGAACGTGAGGAGATTCAAGCTGATCTTGAGGGAAGGAATATCCTTGAAATAGACCACCCTGAAGGTCCTTTTGGCACGAAGGAAGCACCTGCCGTTGTTAAGTCTTACTATAACAGAAGGATTGTTGGATGCCCCGGTGGTGAGGGTGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGGAAGGCAAGCCCCATGAATGTCCAGTGTGTGCACAGTATTTTCAGCTTGAAGTGGTGGGACCTGGCGGTGATCCTTATGGACACCATTGA
Protein sequence

>Msa0304310

MWRRIVSSPHLKTLPSSSHSHPRSAVAGLRFAGLSRHVATQSAGSVKKTVEDVVPIATGHEREEIQADLEGRNILEIDHPEGPFGTKEAPAVVKSYYNRRIVGCPGGEGEDEHDVVWFWLEEGKPHECPVCAQYFQLEVVGPGGDPYGHH*