Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0280470 | XP_003594738.1 | 99.015 | 609 | 5 | 1 | 1 | 609 | 1 | 608 | 0.0 | 1237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0280470 | sp|Q93VT8|ACLB1_ORYSJ | 91.626 | 609 | 50 | 1 | 1 | 609 | 1 | 608 | 0.0 | 1140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0280470 | A2Q2V1 | 99.015 | 609 | 5 | 1 | 1 | 609 | 1 | 608 | 0.0 | 1237 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044170 | Msa0280470 | 0.800437 | 1.442202e-48 | -8.615850e-47 |
| Msa0074670 | Msa0280470 | 0.831568 | 1.550826e-55 | -8.615850e-47 |
| Msa0090770 | Msa0280470 | 0.808966 | 2.388981e-50 | -8.615850e-47 |
| Msa0090850 | Msa0280470 | 0.819899 | 9.114590e-53 | -8.615850e-47 |
| Msa0131190 | Msa0280470 | 0.812557 | 3.993992e-51 | -8.615850e-47 |
| Msa0183700 | Msa0280470 | 0.848496 | 5.906151e-60 | -8.615850e-47 |
| Msa0199720 | Msa0280470 | 0.982230 | 1.464068e-154 | -8.615850e-47 |
| Msa0207690 | Msa0280470 | 0.806579 | 7.681665e-50 | -8.615850e-47 |
| Msa0242260 | Msa0280470 | 0.948702 | 5.578228e-107 | -8.615850e-47 |
| Msa0280470 | Msa0319690 | 0.960846 | 5.076298e-119 | -8.615850e-47 |
| Msa0280470 | Msa0372940 | 0.801486 | 8.803761e-49 | -8.615850e-47 |
| Msa0280470 | Msa0421440 | 0.849856 | 2.471174e-60 | -8.615850e-47 |
| Msa0280470 | Msa0437540 | 0.810813 | 9.563208e-51 | -8.615850e-47 |
| Msa0280470 | Msa0601920 | 0.802084 | 6.635283e-49 | -8.615850e-47 |
| Msa0280470 | Msa0613170 | 0.800875 | 1.173898e-48 | -8.615850e-47 |
| Msa0280470 | Msa0704470 | 0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa0280470 | Msa0745670 | 0.816199 | 6.255555e-52 | -8.615850e-47 |
| Msa0280470 | Msa0758400 | 0.851064 | 1.131729e-60 | -8.615850e-47 |
| Msa0280470 | Msa0996010 | 0.801540 | 8.581597e-49 | -8.615850e-47 |
| Msa0280470 | Msa1040730 | 0.836279 | 1.026838e-56 | -8.615850e-47 |
| Msa0280470 | Msa1053990 | 0.800892 | 1.164204e-48 | -8.615850e-47 |
| Msa0280470 | Msa1175380 | 0.820575 | 6.379129e-53 | -8.615850e-47 |
| Msa0280470 | Msa1277350 | 0.821162 | 4.674617e-53 | -8.615850e-47 |
| Msa0280470 | Msa1315760 | 0.800142 | 1.655816e-48 | -8.615850e-47 |
| Msa0280470 | Msa1320530 | 0.800850 | 1.187884e-48 | -8.615850e-47 |
| Msa0280470 | Msa1335970 | 0.809132 | 2.200968e-50 | -8.615850e-47 |
| Msa0280470 | Msa1463590 | 0.813947 | 1.977764e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0280470 | MtrunA17_Chr2g0294381 | 99.015 | 609 | 5 | 1 | 1 | 609 | 1 | 608 | 0.0 | 1237 |
| Msa0280470 | MtrunA17_Chr6g0481761 | 32.061 | 262 | 163 | 5 | 57 | 317 | 71 | 318 | 1.51e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0280470 | AT3G06650.1 | 92.282 | 609 | 46 | 1 | 1 | 609 | 1 | 608 | 0.0 | 1133 |
| Msa0280470 | AT3G06650.2 | 92.282 | 609 | 46 | 1 | 1 | 609 | 1 | 608 | 0.0 | 1133 |
| Msa0280470 | AT5G49460.2 | 92.118 | 609 | 47 | 1 | 1 | 609 | 1 | 608 | 0.0 | 1129 |
| Msa0280470 | AT5G49460.1 | 92.118 | 609 | 47 | 1 | 1 | 609 | 1 | 608 | 0.0 | 1129 |
| Msa0280470 | AT5G23250.1 | 32.824 | 262 | 161 | 5 | 57 | 317 | 89 | 336 | 1.50e-26 | 111 |
| Msa0280470 | AT5G08300.1 | 31.298 | 262 | 165 | 5 | 57 | 317 | 94 | 341 | 3.82e-24 | 104 |
| Msa0280470 | AT5G23250.2 | 33.184 | 223 | 134 | 5 | 57 | 278 | 89 | 297 | 8.46e-23 | 99.8 |
| Msa0280470 | AT5G23250.3 | 31.765 | 170 | 104 | 4 | 57 | 225 | 89 | 247 | 6.24e-13 | 69.7 |
Find 206 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATCTTACAACACTAATTT+AGG | 0.063853 | 2_3:+15189917 | None:intergenic |
| TAAAGAAACATTTGACAAAT+TGG | 0.209154 | 2_3:-15191961 | Msa0280470:intron |
| AAGAGAATTAAGTTTAAAAT+TGG | 0.225262 | 2_3:+15189830 | None:intergenic |
| TGTTTCAAATTAGCATCTTT+TGG | 0.239004 | 2_3:-15189981 | Msa0280470:three_prime_UTR |
| ATGGTTTGGCAGGTTGTTAT+TGG | 0.248275 | 2_3:-15193439 | Msa0280470:intron |
| TTACAATCGGTCCACGATTT+GGG | 0.250838 | 2_3:-15191042 | Msa0280470:CDS |
| CTTACAATCGGTCCACGATT+TGG | 0.277220 | 2_3:-15191043 | Msa0280470:CDS |
| AATAAAATATGAAGTTGATT+TGG | 0.311801 | 2_3:+15195629 | None:intergenic |
| AGCTAAAAGTGGCGGTGATA+TGG | 0.322091 | 2_3:-15192066 | Msa0280470:CDS |
| AAAATCATTCTAGCAAATTT+CGG | 0.323975 | 2_3:+15189946 | None:intergenic |
| CACTCTTGATTGCAGTGTTA+AGG | 0.328695 | 2_3:+15191765 | None:intergenic |
| TGAACCCGGGTTAATTATTC+CGG | 0.332657 | 2_3:+15194226 | None:intergenic |
| GGAATTCGTGTGGCAGGAAT+AGG | 0.332798 | 2_3:-15190730 | Msa0280470:CDS |
| CATCTTACAACACTAATTTA+GGG | 0.335711 | 2_3:+15189918 | None:intergenic |
| TGAATGCCTCCGACAGTGGC+TGG | 0.342723 | 2_3:+15193415 | None:intergenic |
| GTGGCTGCTTCAATCTCTTC+TGG | 0.346256 | 2_3:+15190078 | None:intergenic |
| AATTTAGTTCTTAATGTAGA+TGG | 0.352341 | 2_3:-15190463 | Msa0280470:CDS |
| ATTGATGAAATTGTTGAGAT+TGG | 0.353667 | 2_3:-15190379 | Msa0280470:CDS |
| CCTGTTGTTGCCTGGGTTAG+TGG | 0.356976 | 2_3:-15192235 | Msa0280470:CDS |
| CTGTTCTTAGATCTTCTTGC+TGG | 0.361782 | 2_3:-15190427 | Msa0280470:CDS |
| TCCACCATGAAAAGCTTCTA+TGG | 0.369141 | 2_3:-15189716 | Msa0280470:three_prime_UTR |
| TCCATTATTGAAAAGGGCTT+TGG | 0.369219 | 2_3:-15191544 | Msa0280470:CDS |
| CTCTCTCGTGTTGTTGGTGT+TGG | 0.370672 | 2_3:+15195580 | None:intergenic |
| AACACATACGTAGCATGAAC+TGG | 0.370784 | 2_3:+15194158 | None:intergenic |
| AATAAATTGAGTACAGTAAC+GGG | 0.379099 | 2_3:+15191477 | None:intergenic |
| ATAGCAACAACTCTAATTGT+AGG | 0.383360 | 2_3:+15193601 | None:intergenic |
| TTAGATCTTCTTGCTGGTAG+TGG | 0.383547 | 2_3:-15190421 | Msa0280470:CDS |
| CTTAATGTAGATGGTGCAAT+TGG | 0.385167 | 2_3:-15190454 | Msa0280470:CDS |
| CATGTCTTCCATTATTGAAA+AGG | 0.386634 | 2_3:-15191551 | Msa0280470:CDS |
| AATTTCATCAATCTCTTGCT+TGG | 0.397141 | 2_3:+15190390 | None:intergenic |
| TTGGTGTTGGTTAGATCAGA+TGG | 0.398597 | 2_3:+15195593 | None:intergenic |
| GATCACGGTCCTTGTGTCTC+TGG | 0.399860 | 2_3:-15191249 | Msa0280470:CDS |
| CTAGTTTCCAGTCTCGTATC+AGG | 0.402509 | 2_3:-15191186 | Msa0280470:intron |
| TCCATTGCCCGTGTAACTAA+TGG | 0.404849 | 2_3:-15192672 | Msa0280470:CDS |
| TTTGTTCTTGCACGATCCAT+TGG | 0.408219 | 2_3:-15190340 | Msa0280470:CDS |
| ATGGTCAGATAGAGTGGAAC+CGG | 0.412111 | 2_3:+15192498 | None:intergenic |
| ATATGCCCGGTCAAACAATA+AGG | 0.415796 | 2_3:-15193533 | Msa0280470:CDS |
| AAGAACTAAATTATTTGCCT+TGG | 0.423578 | 2_3:+15190474 | None:intergenic |
| TCCCATGGGTGGCGGTATAG+TGG | 0.425910 | 2_3:+15190059 | None:intergenic |
| CTCACCTCTGTCATCAGAAA+TGG | 0.429708 | 2_3:+15191709 | None:intergenic |
| TCACCACCTTATTGTTTGAC+CGG | 0.430578 | 2_3:+15193527 | None:intergenic |
| AAATCAAATCAAATCAAATC+AGG | 0.436772 | 2_3:-15195424 | Msa0280470:intron |
| TGTGAATCAGGATCAAGAAT+AGG | 0.437764 | 2_3:-15190603 | Msa0280470:intron |
| TTTAAAATCGGTGACACAGC+TGG | 0.440534 | 2_3:-15193382 | Msa0280470:CDS |
| CTCTACAGGCCTGGATCTGT+TGG | 0.440870 | 2_3:-15193331 | Msa0280470:CDS |
| TAATCCAGTCCAAGCTCTAC+AGG | 0.442431 | 2_3:-15193345 | Msa0280470:CDS |
| ATGTCTTCCATTATTGAAAA+GGG | 0.443957 | 2_3:-15191550 | Msa0280470:CDS |
| TTTGCTATAGGCATTGCAAT+TGG | 0.444653 | 2_3:-15192535 | Msa0280470:intron |
| CCACTAACCCAGGCAACAAC+AGG | 0.448443 | 2_3:+15192235 | None:intergenic |
| CTATTGTGACAGCGAGGGCT+GGG | 0.451031 | 2_3:-15191215 | Msa0280470:CDS |
| ACTATTGTGACAGCGAGGGC+TGG | 0.452325 | 2_3:-15191216 | Msa0280470:CDS |
| CACGATCCATTGGTCTGATC+GGG | 0.453022 | 2_3:-15190330 | Msa0280470:intron |
| TGTTGAAGGTATGAAGAAGA+AGG | 0.453548 | 2_3:-15190752 | Msa0280470:CDS |
| GAATTCGTGTGGCAGGAATA+GGG | 0.454853 | 2_3:-15190729 | Msa0280470:CDS |
| AGAGAAACACCATCAGTTGC+CGG | 0.456727 | 2_3:-15194245 | Msa0280470:CDS |
| TGACCAAACCTGTTGTTGCC+TGG | 0.457191 | 2_3:-15192243 | Msa0280470:CDS |
| ATTGCAGTGTTAAGGTCCTC+AGG | 0.457830 | 2_3:+15191773 | None:intergenic |
| GTGAATCAGGATCAAGAATA+GGG | 0.458843 | 2_3:-15190602 | Msa0280470:intron |
| CTGATACGAGACTGGAAACT+AGG | 0.460049 | 2_3:+15191187 | None:intergenic |
| ACACCTTACGAGTTTGTTGA+AGG | 0.463679 | 2_3:-15190766 | Msa0280470:CDS |
| AAAACAGAGCTTGCGTAGTA+CGG | 0.466683 | 2_3:+15194437 | None:intergenic |
| GTAACAGGTTTGCTTACAAT+CGG | 0.469733 | 2_3:-15191055 | Msa0280470:intron |
| ATAGATCTGGTTCTAAATCA+TGG | 0.470533 | 2_3:-15194479 | Msa0280470:exon |
| CAATTGCTTGGTGTCTGACT+CGG | 0.472128 | 2_3:+15193561 | None:intergenic |
| TGATGCTGCTCGCTACTTCA+AGG | 0.473661 | 2_3:-15191008 | Msa0280470:CDS |
| GCGTGATGAATATTCTTTAG+TGG | 0.474700 | 2_3:-15192287 | Msa0280470:CDS |
| TTCTGATCTCTGTTCTGTTG+TGG | 0.474787 | 2_3:-15189799 | Msa0280470:three_prime_UTR |
| AACCCAGGCAACAACAGGTT+TGG | 0.475786 | 2_3:+15192240 | None:intergenic |
| TCAAAAGCTTCATACGAAGT+AGG | 0.478673 | 2_3:+15191993 | None:intergenic |
| GCACGATCCATTGGTCTGAT+CGG | 0.479197 | 2_3:-15190331 | Msa0280470:CDS |
| AAACAGAGAAGAAGAGTGGG+TGG | 0.483938 | 2_3:+15195461 | None:intergenic |
| CAGTGCCGCCGCATCATCCA+TGG | 0.484294 | 2_3:-15193638 | Msa0280470:CDS |
| TTCAAATCGGAAGTACAATT+CGG | 0.484642 | 2_3:-15192196 | Msa0280470:CDS |
| GCTATAGGCATTGCAATTGG+AGG | 0.485145 | 2_3:-15192532 | Msa0280470:intron |
| GCCATTAGTTACACGGGCAA+TGG | 0.485641 | 2_3:+15192671 | None:intergenic |
| TTGTGCAACACTCTTCAAAT+CGG | 0.486586 | 2_3:-15192209 | Msa0280470:CDS |
| CAGTCCAAGCTCTACAGGCC+TGG | 0.486666 | 2_3:-15193340 | Msa0280470:CDS |
| ATGGTGGAAATTATATGAGT+TGG | 0.486743 | 2_3:+15191728 | None:intergenic |
| AATCAAGCACTAAGAGAAGC+TGG | 0.488327 | 2_3:-15192026 | Msa0280470:CDS |
| TTACTGTACTCAATTTATTG+AGG | 0.489510 | 2_3:-15191473 | Msa0280470:intron |
| GAAACGAATCCAACAGATCC+AGG | 0.490185 | 2_3:+15193322 | None:intergenic |
| GTGTAGAGTACATCCTCCCA+TGG | 0.496100 | 2_3:+15190044 | None:intergenic |
| ACTTCAAGGATGCTCATGAC+AGG | 0.497602 | 2_3:-15190994 | Msa0280470:CDS |
| CACCACCTTATTGTTTGACC+GGG | 0.498514 | 2_3:+15193528 | None:intergenic |
| GTTGTTGCTATTATTGCTGA+AGG | 0.501537 | 2_3:-15193589 | Msa0280470:CDS |
| AGATCCAGGCCTGTAGAGCT+TGG | 0.502863 | 2_3:+15193336 | None:intergenic |
| CTTCAATCTCTTCTGGTCAA+AGG | 0.503199 | 2_3:+15190085 | None:intergenic |
| AAAATCAAGCATCCGCTGGA+TGG | 0.509318 | 2_3:+15194396 | None:intergenic |
| GGAGGAGTAAATTCCTTCAC+TGG | 0.510829 | 2_3:+15191803 | None:intergenic |
| AAGAAGGGAATTCGTGTGGC+AGG | 0.511183 | 2_3:-15190736 | Msa0280470:CDS |
| GAATGCCTCCGACAGTGGCT+GGG | 0.511687 | 2_3:+15193416 | None:intergenic |
| GGCATATGCAATCAATTGCT+TGG | 0.512682 | 2_3:+15193549 | None:intergenic |
| TTAAGGTCCTCAGGGATTTG+TGG | 0.514837 | 2_3:+15191782 | None:intergenic |
| TTAATTATTCCGGCAACTGA+TGG | 0.515691 | 2_3:+15194236 | None:intergenic |
| AAACAGAGCTTGCGTAGTAC+GGG | 0.515815 | 2_3:+15194438 | None:intergenic |
| AAATCAAGCATCCGCTGGAT+GGG | 0.516661 | 2_3:+15194397 | None:intergenic |
| GTTAAAATGATAGTAGTGCT+TGG | 0.517378 | 2_3:-15192322 | Msa0280470:CDS |
| GGTGAGGAGCCATGCTATGC+TGG | 0.519134 | 2_3:-15191580 | Msa0280470:CDS |
| GTAACTAATGGCATTTATGA+AGG | 0.519844 | 2_3:-15192660 | Msa0280470:intron |
| GTTGAGATTGGATATCTGAA+TGG | 0.521018 | 2_3:-15190367 | Msa0280470:CDS |
| AATGGAGTTGTATAATTCGT+TGG | 0.525091 | 2_3:+15192689 | None:intergenic |
| CAGGCCTGTAGAGCTTGGAC+TGG | 0.527346 | 2_3:+15193341 | None:intergenic |
| AATTGCTTGGTGTCTGACTC+GGG | 0.527898 | 2_3:+15193562 | None:intergenic |
| AGCAATTGATTGCATATGCC+CGG | 0.531350 | 2_3:-15193546 | Msa0280470:CDS |
| AGCCACTATACCGCCACCCA+TGG | 0.531519 | 2_3:-15190061 | Msa0280470:CDS |
| TGTTGCTATTATTGCTGAAG+GGG | 0.531984 | 2_3:-15193587 | Msa0280470:CDS |
| GGTTTGTCAACAGATAGATC+TGG | 0.532123 | 2_3:-15194492 | Msa0280470:intron |
| GACCAAACCTGTTGTTGCCT+GGG | 0.532754 | 2_3:-15192242 | Msa0280470:CDS |
| ATAATTAACCCGGGTTCAGA+AGG | 0.534447 | 2_3:-15194221 | Msa0280470:CDS |
| TTGAGATTGGATATCTGAAT+GGG | 0.537917 | 2_3:-15190366 | Msa0280470:CDS |
| AAATGAAAAGAAAGAGAATG+AGG | 0.538643 | 2_3:+15195493 | None:intergenic |
| TGTTGGTTAGATCAGATGGA+TGG | 0.542435 | 2_3:+15195597 | None:intergenic |
| ACTGTCGGAGGCATTCAAGC+TGG | 0.543206 | 2_3:-15193409 | Msa0280470:CDS |
| ATAGTAGTGCTTGGAGAGCT+TGG | 0.544963 | 2_3:-15192313 | Msa0280470:CDS |
| AGCTTGAATGCCTCCGACAG+TGG | 0.546929 | 2_3:+15193411 | None:intergenic |
| GTTGAAGGTATGAAGAAGAA+GGG | 0.547328 | 2_3:-15190751 | Msa0280470:CDS |
| CATAAATGCCATTAGTTACA+CGG | 0.547559 | 2_3:+15192664 | None:intergenic |
| TGTGACAGCGAGGGCTGGGA+AGG | 0.547881 | 2_3:-15191211 | Msa0280470:CDS |
| TACAATCGGTCCACGATTTG+GGG | 0.548454 | 2_3:-15191041 | Msa0280470:CDS |
| CTCTCATGTAGAATAATACC+TGG | 0.553192 | 2_3:-15189678 | Msa0280470:three_prime_UTR |
| GGTGAAACAGAGAAGAAGAG+TGG | 0.553275 | 2_3:+15195457 | None:intergenic |
| GTGTGGCAGGAATAGGGCAC+AGG | 0.554433 | 2_3:-15190723 | Msa0280470:intron |
| TTGTTGCTATTATTGCTGAA+GGG | 0.556004 | 2_3:-15193588 | Msa0280470:CDS |
| TGATTTGATTTGAACTCGGT+TGG | 0.556998 | 2_3:+15195436 | None:intergenic |
| TATTCCATGTATTTCACAGA+AGG | 0.559340 | 2_3:+15190526 | None:intergenic |
| ATTTGCCTTGGTGAGAGTGT+AGG | 0.562301 | 2_3:+15190486 | None:intergenic |
| CAATAAATTGAGTACAGTAA+CGG | 0.562345 | 2_3:+15191476 | None:intergenic |
| ACCTCTGTCATCAGAAATGG+TGG | 0.563725 | 2_3:+15191712 | None:intergenic |
| AGTCAAAATCAAGCATCCGC+TGG | 0.566333 | 2_3:+15194392 | None:intergenic |
| GCCACTATACCGCCACCCAT+GGG | 0.567325 | 2_3:-15190060 | Msa0280470:CDS |
| GTTATTGGCCCAGCCACTGT+CGG | 0.568480 | 2_3:-15193424 | Msa0280470:CDS |
| GTATTTACCTGATACGAGAC+TGG | 0.568810 | 2_3:+15191179 | None:intergenic |
| AACAGAGAAGAAGAGTGGGT+GGG | 0.569030 | 2_3:+15195462 | None:intergenic |
| TTAGTGGAAGCCCTAAAACA+AGG | 0.569998 | 2_3:-15192271 | Msa0280470:CDS |
| AGCAGCCATGGATGATGCGG+CGG | 0.570057 | 2_3:+15193633 | None:intergenic |
| GTTGGTTAGATCAGATGGAT+GGG | 0.571626 | 2_3:+15195598 | None:intergenic |
| AGTGTAGGTTTCAACTTGAA+CGG | 0.572404 | 2_3:+15190501 | None:intergenic |
| ATTGAAAAGGGCTTTGGTGT+TGG | 0.572498 | 2_3:-15191538 | Msa0280470:CDS |
| AGGGAAAATTACACCAGTGA+AGG | 0.572755 | 2_3:-15191816 | Msa0280470:CDS |
| ACGGTTTAACAACATACCAC+AGG | 0.573435 | 2_3:-15192470 | Msa0280470:intron |
| TAGTGCTTGGAGAGCTTGGT+GGG | 0.574648 | 2_3:-15192309 | Msa0280470:CDS |
| ATACCTTCAACAAACTCGTA+AGG | 0.577397 | 2_3:+15190763 | None:intergenic |
| TAAAACATGGTCAGATAGAG+TGG | 0.578796 | 2_3:+15192492 | None:intergenic |
| ATCTTACAACACTAATTTAG+GGG | 0.579096 | 2_3:+15189919 | None:intergenic |
| CAAAGCAGCCATGGATGATG+CGG | 0.579483 | 2_3:+15193630 | None:intergenic |
| AATATGAAGTTGATTTGGAG+AGG | 0.583633 | 2_3:+15195634 | None:intergenic |
| GTAGCGAGCAGCATCATCAA+TGG | 0.584206 | 2_3:+15191015 | None:intergenic |
| GTAGTGCTTGGAGAGCTTGG+TGG | 0.586706 | 2_3:-15192310 | Msa0280470:CDS |
| GTGAAACAGAGAAGAAGAGT+GGG | 0.586962 | 2_3:+15195458 | None:intergenic |
| GGTGATATGGAGTCTGCTCA+AGG | 0.587199 | 2_3:-15192053 | Msa0280470:CDS |
| TATATATATAAGGCGAGTAG+TGG | 0.589465 | 2_3:+15195523 | None:intergenic |
| TTGGTTAGATCAGATGGATG+GGG | 0.589892 | 2_3:+15195599 | None:intergenic |
| AGTTGCCGGAATAATTAACC+CGG | 0.590690 | 2_3:-15194231 | Msa0280470:CDS |
| TAGTGGAAGCCCTAAAACAA+GGG | 0.590891 | 2_3:-15192270 | Msa0280470:CDS |
| ATAAATGCCATTAGTTACAC+GGG | 0.592429 | 2_3:+15192665 | None:intergenic |
| TTGCAGTGTTAAGGTCCTCA+GGG | 0.593001 | 2_3:+15191774 | None:intergenic |
| AACTTACCCGATCAGACCAA+TGG | 0.594143 | 2_3:+15190324 | None:intergenic |
| TGGTTCTAAATCATGGCCAC+CGG | 0.595081 | 2_3:-15194472 | Msa0280470:exon |
| AGAGACACAAGGACCGTGAT+CGG | 0.595804 | 2_3:+15191251 | None:intergenic |
| GTACATCCTCCCATGGGTGG+CGG | 0.596992 | 2_3:+15190051 | None:intergenic |
| CTTAACACTGCAATCAAGAG+TGG | 0.600962 | 2_3:-15191764 | Msa0280470:CDS |
| ATCATGTTATGTGCCGATCA+CGG | 0.602097 | 2_3:-15191264 | Msa0280470:CDS |
| AAATTATATGAGTTGGAGCA+CGG | 0.602685 | 2_3:+15191735 | None:intergenic |
| AGTACGGGAGAATAATTGTC+CGG | 0.602802 | 2_3:+15194453 | None:intergenic |
| ATATATAAGGCGAGTAGTGG+TGG | 0.603169 | 2_3:+15195526 | None:intergenic |
| AGTACAACAGCAACACATGT+AGG | 0.606036 | 2_3:+15189745 | None:intergenic |
| TGTTGTTAAACCGTAAAACA+TGG | 0.610398 | 2_3:+15192479 | None:intergenic |
| AGGCTGCTTCAAAGCAGCCA+TGG | 0.611723 | 2_3:+15193621 | None:intergenic |
| TGTAGAGTACATCCTCCCAT+GGG | 0.614146 | 2_3:+15190045 | None:intergenic |
| ATAAATCAGGGAGCTAAAAG+TGG | 0.616382 | 2_3:-15192077 | Msa0280470:intron |
| TTTGAAATCCTTCTGAACCC+GGG | 0.618519 | 2_3:+15194213 | None:intergenic |
| GATTTGATTTGATTTGAACT+CGG | 0.618581 | 2_3:+15195432 | None:intergenic |
| TGCAAAATTGATGAAGACAT+CGG | 0.619064 | 2_3:+15193970 | None:intergenic |
| TTGATGAAGACATCGGCAGT+AGG | 0.621353 | 2_3:+15193977 | None:intergenic |
| ACAATCGGTCCACGATTTGG+GGG | 0.622921 | 2_3:-15191040 | Msa0280470:CDS |
| TGAAAAGAAAGAGAATGAGG+AGG | 0.623556 | 2_3:+15195496 | None:intergenic |
| AGGTCCTCAGGGATTTGTGG+AGG | 0.624313 | 2_3:+15191785 | None:intergenic |
| TGGTCAGATAGAGTGGAACC+GGG | 0.626895 | 2_3:+15192499 | None:intergenic |
| ACACATACGTAGCATGAACT+GGG | 0.626996 | 2_3:+15194159 | None:intergenic |
| ATCATTCTAGCAAATTTCGG+AGG | 0.627010 | 2_3:+15189949 | None:intergenic |
| CAATACTATTGTGACAGCGA+GGG | 0.631045 | 2_3:-15191220 | Msa0280470:CDS |
| ATACGTAGCATGAACTGGGA+TGG | 0.634525 | 2_3:+15194163 | None:intergenic |
| ATTGAGTACAGTAACGGGGT+AGG | 0.634839 | 2_3:+15191482 | None:intergenic |
| TGTACTCTACACAAAATGAG+AGG | 0.634975 | 2_3:-15190033 | Msa0280470:exon |
| ATGGGTACACCAGCATAGCA+TGG | 0.640473 | 2_3:+15191571 | None:intergenic |
| AGAGTACATCCTCCCATGGG+TGG | 0.641683 | 2_3:+15190048 | None:intergenic |
| ATTGGCCCAGCCACTGTCGG+AGG | 0.642488 | 2_3:-15193421 | Msa0280470:CDS |
| GTGATATGGAGTCTGCTCAA+GGG | 0.644773 | 2_3:-15192052 | Msa0280470:CDS |
| CTTCAAGGATGCTCATGACA+GGG | 0.646371 | 2_3:-15190993 | Msa0280470:intron |
| TCCACCATTTCTGATGACAG+AGG | 0.651297 | 2_3:-15191713 | Msa0280470:intron |
| TGCACAAGTTCCACTAACCC+AGG | 0.651311 | 2_3:+15192225 | None:intergenic |
| ACTATACCGCCACCCATGGG+AGG | 0.656736 | 2_3:-15190057 | Msa0280470:CDS |
| GTTGCCGGAATAATTAACCC+GGG | 0.662569 | 2_3:-15194230 | Msa0280470:CDS |
| GAAGAAGAAGGGAATTCGTG+TGG | 0.666484 | 2_3:-15190740 | Msa0280470:CDS |
| TGCCCGGTCAAACAATAAGG+TGG | 0.666636 | 2_3:-15193530 | Msa0280470:intron |
| AGAGCAGATACACACCGCAA+AGG | 0.668786 | 2_3:+15194368 | None:intergenic |
| GTACTCTACACAAAATGAGA+GGG | 0.669236 | 2_3:-15190032 | Msa0280470:exon |
| ACAAGCAGCTTCCCATCCAG+CGG | 0.676917 | 2_3:-15194408 | Msa0280470:CDS |
| TTGTGAGCACCAGAGACACA+AGG | 0.687612 | 2_3:+15191240 | None:intergenic |
| AATCAGGGAGCTAAAAGTGG+CGG | 0.688527 | 2_3:-15192074 | Msa0280470:intron |
| ACAATACTATTGTGACAGCG+AGG | 0.692975 | 2_3:-15191221 | Msa0280470:CDS |
| ACGGGAGAATAATTGTCCGG+TGG | 0.694280 | 2_3:+15194456 | None:intergenic |
| TACTCCTCCACAAATCCCTG+AGG | 0.730328 | 2_3:-15191789 | Msa0280470:CDS |
| GGTCAGATAGAGTGGAACCG+GGG | 0.749188 | 2_3:+15192500 | None:intergenic |
| TGAAACCTACACTCTCACCA+AGG | 0.752906 | 2_3:-15190491 | Msa0280470:CDS |
| ATAAATTGAGTACAGTAACG+GGG | 0.761826 | 2_3:+15191478 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCAACAAAAATTAAAAAA+AGG | + | chr2_3:15190192-15190211 | None:intergenic | 10.0% |
| !!! | TTTAATTTTTGTTGATAATT+TGG | - | chr2_3:15190195-15190214 | Msa0280470:intron | 10.0% |
| !! | AAATTTGAAAGATTTATATA+GGG | + | chr2_3:15191626-15191645 | None:intergenic | 10.0% |
| !! | TAAATTTGAAAGATTTATAT+AGG | + | chr2_3:15191627-15191646 | None:intergenic | 10.0% |
| !!! | AATAATCATTTTAGAAAATT+AGG | + | chr2_3:15192235-15192254 | None:intergenic | 10.0% |
| !! | TATGATATTATAGTTAATTA+AGG | + | chr2_3:15193444-15193463 | None:intergenic | 10.0% |
| !! | ATTAACTATAATATCATAAT+TGG | - | chr2_3:15193446-15193465 | Msa0280470:intron | 10.0% |
| !!! | ATTTAATTTAAAAAGAAACT+TGG | - | chr2_3:15194424-15194443 | Msa0280470:CDS | 10.0% |
| !!! | TTTAATTTAAAAAGAAACTT+GGG | - | chr2_3:15194425-15194444 | Msa0280470:CDS | 10.0% |
| !! | AATTTATGATTTACATATTT+CGG | - | chr2_3:15195013-15195032 | Msa0280470:intron | 10.0% |
| !!! | AATAAAATATGAAGTTGATT+TGG | + | chr2_3:15189682-15189701 | None:intergenic | 15.0% |
| !!! | TTTAGAATTATGATTTGATT+TGG | - | chr2_3:15189993-15190012 | Msa0280470:three_prime_UTR | 15.0% |
| !!! | AAAATTCAAAGTCTTTTTTT+GGG | - | chr2_3:15190414-15190433 | Msa0280470:CDS | 15.0% |
| !! | ATCTTCAAAATCAAAATAAA+AGG | + | chr2_3:15190541-15190560 | None:intergenic | 15.0% |
| !!! | ACATTTTAAAATATGACTTT+TGG | - | chr2_3:15190735-15190754 | Msa0280470:CDS | 15.0% |
| !!! | AAATATCTCATTTCATATTT+TGG | - | chr2_3:15191453-15191472 | Msa0280470:intron | 15.0% |
| !! | TAAATCTTTCAAATTTAACA+AGG | - | chr2_3:15191630-15191649 | Msa0280470:intron | 15.0% |
| !!! | AATGAAAAAACTTATTTTAG+TGG | - | chr2_3:15191844-15191863 | Msa0280470:intron | 15.0% |
| !! | TTAAAATAAATTCAAAGATG+AGG | + | chr2_3:15192361-15192380 | None:intergenic | 15.0% |
| !!! | ATTTTCTTTAAACTATCATT+TGG | + | chr2_3:15192510-15192529 | None:intergenic | 15.0% |
| !! | AAATTAAATTCTGTTCTATT+AGG | + | chr2_3:15194413-15194432 | None:intergenic | 15.0% |
| !! | TTAATTTAAAAAGAAACTTG+GGG | - | chr2_3:15194426-15194445 | Msa0280470:CDS | 15.0% |
| !!! | AAGAGAATTAAGTTTAAAAT+TGG | + | chr2_3:15195481-15195500 | None:intergenic | 15.0% |
| !! | AAATCAAATCAAATCAAATC+AGG | - | chr2_3:15189884-15189903 | Msa0280470:three_prime_UTR | 20.0% |
| !!! | TCTAGAATGCAAAATATTAA+CGG | + | chr2_3:15189917-15189936 | None:intergenic | 20.0% |
| !! | TTTATTGTTCAATTGTATCA+TGG | - | chr2_3:15190031-15190050 | Msa0280470:exon | 20.0% |
| !!! | GAAAATTCAAAGTCTTTTTT+TGG | - | chr2_3:15190413-15190432 | Msa0280470:CDS | 20.0% |
| !! | TTATCAAAAATGAGAATTTG+AGG | + | chr2_3:15190496-15190515 | None:intergenic | 20.0% |
| !!! | TGATAACTTTTTCTTGTTTA+AGG | - | chr2_3:15190510-15190529 | Msa0280470:CDS | 20.0% |
| !!! | GATAACTTTTTCTTGTTTAA+GGG | - | chr2_3:15190511-15190530 | Msa0280470:CDS | 20.0% |
| !!! | ATCTTTGCTTTTAATGTTAA+TGG | - | chr2_3:15191015-15191034 | Msa0280470:CDS | 20.0% |
| !! | ATTGTACAATAAGATTTCAT+AGG | + | chr2_3:15191404-15191423 | None:intergenic | 20.0% |
| !! | AATCTTGAAAAATAGTTTCT+AGG | - | chr2_3:15192195-15192214 | Msa0280470:CDS | 20.0% |
| !!! | AATTTGAGCTTTATTTCTTA+TGG | - | chr2_3:15192533-15192552 | Msa0280470:intron | 20.0% |
| !!! | ATTATATCTTACTTTGCTAT+AGG | - | chr2_3:15192761-15192780 | Msa0280470:intron | 20.0% |
| !! | ATTTATTTACATTAAACCTC+AGG | - | chr2_3:15192964-15192983 | Msa0280470:intron | 20.0% |
| !!! | TGAGAAATTTGTTAAAAGAT+AGG | + | chr2_3:15193158-15193177 | None:intergenic | 20.0% |
| !! | TAAAGAAACATTTGACAAAT+TGG | - | chr2_3:15193347-15193366 | Msa0280470:CDS | 20.0% |
| !! | TTAAAAGGTGAATTAAGATA+TGG | + | chr2_3:15193399-15193418 | None:intergenic | 20.0% |
| !! | AAAATTTATCTAAAGAAGCT+TGG | + | chr2_3:15193962-15193981 | None:intergenic | 20.0% |
| !!! | TTATCCATTTAGATATTTTG+TGG | - | chr2_3:15193992-15194011 | Msa0280470:CDS | 20.0% |
| !! | TAATTTAAAAAGAAACTTGG+GGG | - | chr2_3:15194427-15194446 | Msa0280470:CDS | 20.0% |
| !!! | AATTTAGTTCTTAATGTAGA+TGG | - | chr2_3:15194845-15194864 | Msa0280470:intron | 20.0% |
| !! | AAAATCATTCTAGCAAATTT+CGG | + | chr2_3:15195365-15195384 | None:intergenic | 20.0% |
| !! | AGGAGGTGTATATATATATA+AGG | + | chr2_3:15189798-15189817 | None:intergenic | 25.0% |
| ! | AAATGAAAAGAAAGAGAATG+AGG | + | chr2_3:15189818-15189837 | None:intergenic | 25.0% |
| !!! | GATTTGATTTGATTTGAACT+CGG | + | chr2_3:15189879-15189898 | None:intergenic | 25.0% |
| ! | TTGATAGAACTTGAAAGAAT+TGG | + | chr2_3:15189963-15189982 | None:intergenic | 25.0% |
| ! | AGGTAGATTTCAATTCAATT+TGG | - | chr2_3:15190076-15190095 | Msa0280470:CDS | 25.0% |
| ! | AGATTTCAATTCAATTTGGT+TGG | - | chr2_3:15190080-15190099 | Msa0280470:CDS | 25.0% |
| !!! | TTGTTGATAATTTGGTAATG+TGG | - | chr2_3:15190203-15190222 | Msa0280470:intron | 25.0% |
| ! | GAAAACTATTCAAAGATGAA+AGG | + | chr2_3:15190279-15190298 | None:intergenic | 25.0% |
| ! | ATTTGTGGTTTCTACTAAAA+TGG | - | chr2_3:15190664-15190683 | Msa0280470:intron | 25.0% |
| !! | AGTTGTAATTTTGTATTCAC+AGG | - | chr2_3:15191039-15191058 | Msa0280470:CDS | 25.0% |
| !!! | GGATTTCAAAAACTCTTTTT+TGG | - | chr2_3:15191108-15191127 | Msa0280470:intron | 25.0% |
| !! | TCATCAATTTTGCATCATTT+AGG | - | chr2_3:15191347-15191366 | Msa0280470:intron | 25.0% |
| !! | GTCATTAGCTAAATAGATTT+TGG | - | chr2_3:15191493-15191512 | Msa0280470:CDS | 25.0% |
| ! | TTCAGTATTAGAATAATGAG+AGG | - | chr2_3:15191518-15191537 | Msa0280470:CDS | 25.0% |
| !!! | AAAACTTATTTTAGTGGTCA+TGG | - | chr2_3:15191850-15191869 | Msa0280470:intron | 25.0% |
| ! | TATTCACTTAACACATATCT+AGG | + | chr2_3:15192274-15192293 | None:intergenic | 25.0% |
| !! | AATATAATTGCTATTGCAAC+AGG | - | chr2_3:15192290-15192309 | Msa0280470:CDS | 25.0% |
| ! | ATGAAAGAAAAAATTACCTG+TGG | + | chr2_3:15192857-15192876 | None:intergenic | 25.0% |
| ! | AAACATCTGCATTTCAAAAA+AGG | - | chr2_3:15192893-15192912 | Msa0280470:intron | 25.0% |
| ! | TAATGTAAATAAATCCAGAC+AGG | + | chr2_3:15192958-15192977 | None:intergenic | 25.0% |
| ! | TTAATGCTTTCCTCATAAAA+AGG | - | chr2_3:15193179-15193198 | Msa0280470:intron | 25.0% |
| ! | TGAAAAGAGACTTCTTTAAA+AGG | + | chr2_3:15193414-15193433 | None:intergenic | 25.0% |
| !! | CTTATCTTTTCTTAGATTGA+AGG | - | chr2_3:15193469-15193488 | Msa0280470:intron | 25.0% |
| !!! | TTTTCAATAATGGAAGACAT+GGG | + | chr2_3:15193758-15193777 | None:intergenic | 25.0% |
| ! | ATGTCTTCCATTATTGAAAA+GGG | - | chr2_3:15193758-15193777 | Msa0280470:intron | 25.0% |
| ! | AATAAATTGAGTACAGTAAC+GGG | + | chr2_3:15193834-15193853 | None:intergenic | 25.0% |
| ! | CAATAAATTGAGTACAGTAA+CGG | + | chr2_3:15193835-15193854 | None:intergenic | 25.0% |
| ! | TTACTGTACTCAATTTATTG+AGG | - | chr2_3:15193835-15193854 | Msa0280470:intron | 25.0% |
| ! | CAAATGGTGAAAAATATTTG+AGG | + | chr2_3:15193887-15193906 | None:intergenic | 25.0% |
| ! | ATACTTAAGTGACAAACATT+TGG | + | chr2_3:15193915-15193934 | None:intergenic | 25.0% |
| ! | AGTACCACAAAATATCTAAA+TGG | + | chr2_3:15193999-15194018 | None:intergenic | 25.0% |
| ! | GTGGTACTAATACATTATAT+TGG | - | chr2_3:15194011-15194030 | Msa0280470:intron | 25.0% |
| ! | TCAGAAGTAAATAAACCAAA+CGG | + | chr2_3:15194158-15194177 | None:intergenic | 25.0% |
| !! | GCTCGTAAATAATCATTTTA+CGG | + | chr2_3:15194229-15194248 | None:intergenic | 25.0% |
| ! | AGAACTAGAATAGAAATGTT+GGG | - | chr2_3:15194373-15194392 | Msa0280470:intron | 25.0% |
| ! | AAGAACTAAATTATTTGCCT+TGG | + | chr2_3:15194837-15194856 | None:intergenic | 25.0% |
| ! | ATTGATGAAATTGTTGAGAT+TGG | - | chr2_3:15194929-15194948 | Msa0280470:intron | 25.0% |
| !! | TTAGGACATTATTGAAGTTT+TGG | - | chr2_3:15195047-15195066 | Msa0280470:intron | 25.0% |
| ! | GAAGGAAAATATATTTGACT+CGG | - | chr2_3:15195163-15195182 | Msa0280470:intron | 25.0% |
| !! | TGTTCCTTGTTTAAAATTTC+AGG | - | chr2_3:15195196-15195215 | Msa0280470:intron | 25.0% |
| !!! | AAAATGAGAGGGTTTTTTTA+TGG | - | chr2_3:15195287-15195306 | Msa0280470:intron | 25.0% |
| !! | TGTTTCAAATTAGCATCTTT+TGG | - | chr2_3:15195327-15195346 | Msa0280470:intron | 25.0% |
| ! | ATCTTACAACACTAATTTAG+GGG | + | chr2_3:15195392-15195411 | None:intergenic | 25.0% |
| ! | CATCTTACAACACTAATTTA+GGG | + | chr2_3:15195393-15195412 | None:intergenic | 25.0% |
| ! | ACATCTTACAACACTAATTT+AGG | + | chr2_3:15195394-15195413 | None:intergenic | 25.0% |
| TATATATATAAGGCGAGTAG+TGG | + | chr2_3:15189788-15189807 | None:intergenic | 30.0% | |
| !!! | CTTACGTGCATTTTTTTGTT+AGG | - | chr2_3:15190056-15190075 | Msa0280470:CDS | 30.0% |
| TTTCAATTCAATTTGGTTGG+TGG | - | chr2_3:15190083-15190102 | Msa0280470:CDS | 30.0% | |
| ! | AGTTTTCTGTTAGACTAATG+AGG | - | chr2_3:15190292-15190311 | Msa0280470:intron | 30.0% |
| AGTTCATGATTCACAACAAT+AGG | + | chr2_3:15190581-15190600 | None:intergenic | 30.0% | |
| ! | GAACATTGATCAACTAGTTT+AGG | + | chr2_3:15190634-15190653 | None:intergenic | 30.0% |
| GATATTGAAAACTAATGCAG+TGG | - | chr2_3:15190795-15190814 | Msa0280470:intron | 30.0% | |
| !! | ATAGATCTGGTTCTAAATCA+TGG | - | chr2_3:15190829-15190848 | Msa0280470:intron | 30.0% |
| !!! | TCAAAAACTCTTTTTTGGTC+AGG | - | chr2_3:15191113-15191132 | Msa0280470:intron | 30.0% |
| GTTGATTATTCGTTTCTGTA+TGG | - | chr2_3:15191170-15191189 | Msa0280470:intron | 30.0% | |
| AAATGTCATTCACTACAAGT+TGG | + | chr2_3:15191234-15191253 | None:intergenic | 30.0% | |
| TGCAAAATTGATGAAGACAT+CGG | + | chr2_3:15191341-15191360 | None:intergenic | 30.0% | |
| ! | TCAATTTTGCATCATTTAGG+AGG | - | chr2_3:15191350-15191369 | Msa0280470:intron | 30.0% |
| ATAGCAACAACTCTAATTGT+AGG | + | chr2_3:15191710-15191729 | None:intergenic | 30.0% | |
| ! | TTGTTGCTATTATTGCTGAA+GGG | - | chr2_3:15191720-15191739 | Msa0280470:CDS | 30.0% |
| !!! | TTATTTTAGTGGTCATGGTT+TGG | - | chr2_3:15191855-15191874 | Msa0280470:intron | 30.0% |
| !!! | ATGGCTTTATTTTCTAGTTG+AGG | - | chr2_3:15192043-15192062 | Msa0280470:CDS | 30.0% |
| TAGTTATCTCTACAATGTCA+AGG | + | chr2_3:15192121-15192140 | None:intergenic | 30.0% | |
| CTGTTTATACTTGTCCTTAA+CGG | - | chr2_3:15192158-15192177 | Msa0280470:intron | 30.0% | |
| ! | GAAAGCTCTTTGATTCTTTT+GGG | + | chr2_3:15192412-15192431 | None:intergenic | 30.0% |
| TTTCCTTAAGATACTTTGCT+GGG | - | chr2_3:15192428-15192447 | Msa0280470:intron | 30.0% | |
| AATGGAGTTGTATAATTCGT+TGG | + | chr2_3:15192622-15192641 | None:intergenic | 30.0% | |
| ATAAATGCCATTAGTTACAC+GGG | + | chr2_3:15192646-15192665 | None:intergenic | 30.0% | |
| CATAAATGCCATTAGTTACA+CGG | + | chr2_3:15192647-15192666 | None:intergenic | 30.0% | |
| GTAACTAATGGCATTTATGA+AGG | - | chr2_3:15192648-15192667 | Msa0280470:intron | 30.0% | |
| !!! | GCATGCTGATTTAATCTTTT+CGG | - | chr2_3:15192675-15192694 | Msa0280470:CDS | 30.0% |
| TGTTGTTAAACCGTAAAACA+TGG | + | chr2_3:15192832-15192851 | None:intergenic | 30.0% | |
| !! | ACTACTATCATTTTAACCTG+AGG | + | chr2_3:15192983-15193002 | None:intergenic | 30.0% |
| GTTAAAATGATAGTAGTGCT+TGG | - | chr2_3:15192986-15193005 | Msa0280470:intron | 30.0% | |
| ! | TTCAAATCGGAAGTACAATT+CGG | - | chr2_3:15193112-15193131 | Msa0280470:intron | 30.0% |
| TACTTGCACTTGTATAAATC+AGG | - | chr2_3:15193218-15193237 | Msa0280470:intron | 30.0% | |
| ACTTGCACTTGTATAAATCA+GGG | - | chr2_3:15193219-15193238 | Msa0280470:intron | 30.0% | |
| ! | ATCTTTTCTTAGATTGAAGG+AGG | - | chr2_3:15193472-15193491 | Msa0280470:intron | 30.0% |
| ! | TCTTTTCTTAGATTGAAGGA+GGG | - | chr2_3:15193473-15193492 | Msa0280470:intron | 30.0% |
| ! | AAATTATATGAGTTGGAGCA+CGG | + | chr2_3:15193576-15193595 | None:intergenic | 30.0% |
| ! | ATGGTGGAAATTATATGAGT+TGG | + | chr2_3:15193583-15193602 | None:intergenic | 30.0% |
| ACGTGTTGTAATTTAGAGAT+GGG | - | chr2_3:15193633-15193652 | Msa0280470:CDS | 30.0% | |
| ! | TTTCTCCCAATATTTTGCAA+AGG | - | chr2_3:15193707-15193726 | Msa0280470:intron | 30.0% |
| !! | CTTTTCAATAATGGAAGACA+TGG | + | chr2_3:15193759-15193778 | None:intergenic | 30.0% |
| CATGTCTTCCATTATTGAAA+AGG | - | chr2_3:15193757-15193776 | Msa0280470:intron | 30.0% | |
| ATAAATTGAGTACAGTAACG+GGG | + | chr2_3:15193833-15193852 | None:intergenic | 30.0% | |
| CAAACATTTGGCAAAACAAA+TGG | + | chr2_3:15193903-15193922 | None:intergenic | 30.0% | |
| !! | GGTTTATTTACTTCTGAAGT+AGG | - | chr2_3:15194161-15194180 | Msa0280470:intron | 30.0% |
| !! | CGTATTTAGCTCAAAAGTTT+TGG | + | chr2_3:15194206-15194225 | None:intergenic | 30.0% |
| !! | ATTTCTATTCTAGTTCTCCT+TGG | + | chr2_3:15194370-15194389 | None:intergenic | 30.0% |
| GAGAACTAGAATAGAAATGT+TGG | - | chr2_3:15194372-15194391 | Msa0280470:intron | 30.0% | |
| CTTCATCTTTCATCTAACAT+GGG | - | chr2_3:15194487-15194506 | Msa0280470:intron | 30.0% | |
| TTCATCTTTCATCTAACATG+GGG | - | chr2_3:15194488-15194507 | Msa0280470:intron | 30.0% | |
| ! | ATTATATTTTGCCTTGTCAC+AGG | - | chr2_3:15194514-15194533 | Msa0280470:intron | 30.0% |
| ! | TTATATTTTGCCTTGTCACA+GGG | - | chr2_3:15194515-15194534 | Msa0280470:intron | 30.0% |
| ! | TTTTCCTTCTGTGAAATACA+TGG | - | chr2_3:15194778-15194797 | Msa0280470:intron | 30.0% |
| TATTCCATGTATTTCACAGA+AGG | + | chr2_3:15194785-15194804 | None:intergenic | 30.0% | |
| AATTTCATCAATCTCTTGCT+TGG | + | chr2_3:15194921-15194940 | None:intergenic | 30.0% | |
| TTGAGATTGGATATCTGAAT+GGG | - | chr2_3:15194942-15194961 | Msa0280470:intron | 30.0% | |
| ! | CAAGAGAGTTGTTGATAAAA+AGG | + | chr2_3:15195083-15195102 | None:intergenic | 30.0% |
| TCATTGATATTGCGTATAGA+AGG | - | chr2_3:15195145-15195164 | Msa0280470:intron | 30.0% | |
| ! | TGTGCCTGAAATTTTAAACA+AGG | + | chr2_3:15195203-15195222 | None:intergenic | 30.0% |
| TGAAAAGAAAGAGAATGAGG+AGG | + | chr2_3:15189815-15189834 | None:intergenic | 35.0% | |
| !! | TGATTTGATTTGAACTCGGT+TGG | + | chr2_3:15189875-15189894 | None:intergenic | 35.0% |
| !! | ATTCAATTTGGTTGGTGGTT+TGG | - | chr2_3:15190088-15190107 | Msa0280470:CDS | 35.0% |
| GGTTTAATGTCATAACTGTG+TGG | - | chr2_3:15190122-15190141 | Msa0280470:intron | 35.0% | |
| ! | TGTGCTCATTTGTTAGTGAA+AGG | - | chr2_3:15190243-15190262 | Msa0280470:intron | 35.0% |
| TGATTGAACGACTATGAATG+CGG | + | chr2_3:15190352-15190371 | None:intergenic | 35.0% | |
| CATAGTCGTTCAATCAAGAT+CGG | - | chr2_3:15190356-15190375 | Msa0280470:CDS | 35.0% | |
| TGTTCTCTACATGTGATTTG+TGG | - | chr2_3:15190649-15190668 | Msa0280470:intron | 35.0% | |
| !!! | CTTGATTTTGACTTCCTTTG+CGG | - | chr2_3:15190926-15190945 | Msa0280470:intron | 35.0% |
| TTAATTATTCCGGCAACTGA+TGG | + | chr2_3:15191075-15191094 | None:intergenic | 35.0% | |
| !!! | TTTTGAAATCCTTCTGAACC+CGG | + | chr2_3:15191099-15191118 | None:intergenic | 35.0% |
| !!! | AAAACTCTTTTTTGGTCAGG+AGG | - | chr2_3:15191116-15191135 | Msa0280470:intron | 35.0% |
| !! | TTCACTACAAGTTGGTTACT+TGG | + | chr2_3:15191226-15191245 | None:intergenic | 35.0% |
| AGCTAAGAACACATTACACT+TGG | + | chr2_3:15191265-15191284 | None:intergenic | 35.0% | |
| ! | GTTGTTGCTATTATTGCTGA+AGG | - | chr2_3:15191719-15191738 | Msa0280470:CDS | 35.0% |
| ! | TGTTGCTATTATTGCTGAAG+GGG | - | chr2_3:15191721-15191740 | Msa0280470:CDS | 35.0% |
| CAATAAGGTGGTGATTCAAA+TGG | - | chr2_3:15191790-15191809 | Msa0280470:CDS | 35.0% | |
| !!! | CAAGCTGGTGCTTTTAAAAT+CGG | - | chr2_3:15191914-15191933 | Msa0280470:intron | 35.0% |
| TCATTTCCTGCTTATGTTGA+TGG | - | chr2_3:15192024-15192043 | Msa0280470:CDS | 35.0% | |
| ATAAAGCCATCAACATAAGC+AGG | + | chr2_3:15192033-15192052 | None:intergenic | 35.0% | |
| CGTTAAGGACAAGTATAAAC+AGG | + | chr2_3:15192160-15192179 | None:intergenic | 35.0% | |
| TTAGATGAACTAAGCCGTTA+AGG | + | chr2_3:15192175-15192194 | None:intergenic | 35.0% | |
| ! | GGAAAGCTCTTTGATTCTTT+TGG | + | chr2_3:15192413-15192432 | None:intergenic | 35.0% |
| CTTTCCTTAAGATACTTTGC+TGG | - | chr2_3:15192427-15192446 | Msa0280470:intron | 35.0% | |
| TTCCTTAAGATACTTTGCTG+GGG | - | chr2_3:15192429-15192448 | Msa0280470:intron | 35.0% | |
| TATGGTGCATAATGTATGCA+TGG | - | chr2_3:15192551-15192570 | Msa0280470:intron | 35.0% | |
| ! | AGACTACCTTTTGAATTGCA+GGG | - | chr2_3:15192588-15192607 | Msa0280470:intron | 35.0% |
| ! | TTTGCTATAGGCATTGCAAT+TGG | - | chr2_3:15192773-15192792 | Msa0280470:intron | 35.0% |
| TAAAACATGGTCAGATAGAG+TGG | + | chr2_3:15192819-15192838 | None:intergenic | 35.0% | |
| ! | CTCTATCTGACCATGTTTTA+CGG | - | chr2_3:15192819-15192838 | Msa0280470:intron | 35.0% |
| GCGTGATGAATATTCTTTAG+TGG | - | chr2_3:15193021-15193040 | Msa0280470:intron | 35.0% | |
| TTGTGCAACACTCTTCAAAT+CGG | - | chr2_3:15193099-15193118 | Msa0280470:intron | 35.0% | |
| ! | AGAATGTGGTCCTTTTTATG+AGG | + | chr2_3:15193192-15193211 | None:intergenic | 35.0% |
| TGCAAGTAGCATTAAGAATG+TGG | + | chr2_3:15193206-15193225 | None:intergenic | 35.0% | |
| ATAAATCAGGGAGCTAAAAG+TGG | - | chr2_3:15193231-15193250 | Msa0280470:intron | 35.0% | |
| TCAAAAGCTTCATACGAAGT+AGG | + | chr2_3:15193318-15193337 | None:intergenic | 35.0% | |
| CACGTGTTGTAATTTAGAGA+TGG | - | chr2_3:15193632-15193651 | Msa0280470:CDS | 35.0% | |
| CTATCAAATTTGAGTGTCTC+AGG | + | chr2_3:15193675-15193694 | None:intergenic | 35.0% | |
| CCTCACCTTTGCAAAATATT+GGG | + | chr2_3:15193715-15193734 | None:intergenic | 35.0% | |
| TCCTCACCTTTGCAAAATAT+TGG | + | chr2_3:15193716-15193735 | None:intergenic | 35.0% | |
| TCCATTATTGAAAAGGGCTT+TGG | - | chr2_3:15193764-15193783 | Msa0280470:intron | 35.0% | |
| ! | ACCAAAGCCCTTTTCAATAA+TGG | + | chr2_3:15193768-15193787 | None:intergenic | 35.0% |
| ! | GTGATGTTATCTCTCTTTTG+TGG | - | chr2_3:15193792-15193811 | Msa0280470:intron | 35.0% |
| TATTTACGAGCTTCTGTAAC+AGG | - | chr2_3:15194238-15194257 | Msa0280470:CDS | 35.0% | |
| ! | GTAACAGGTTTGCTTACAAT+CGG | - | chr2_3:15194253-15194272 | Msa0280470:intron | 35.0% |
| ATACATTTCATGTGAAGCCA+AGG | - | chr2_3:15194350-15194369 | Msa0280470:intron | 35.0% | |
| AGAATAGAAATGTTGGGTCT+TGG | - | chr2_3:15194379-15194398 | Msa0280470:intron | 35.0% | |
| GAATAGAAATGTTGGGTCTT+GGG | - | chr2_3:15194380-15194399 | Msa0280470:intron | 35.0% | |
| TGAAGCATATGTGTGTTTGT+GGG | + | chr2_3:15194472-15194491 | None:intergenic | 35.0% | |
| ATGAAGCATATGTGTGTTTG+TGG | + | chr2_3:15194473-15194492 | None:intergenic | 35.0% | |
| GCTTCATCTTTCATCTAACA+TGG | - | chr2_3:15194486-15194505 | Msa0280470:intron | 35.0% | |
| ! | TATATTTTGCCTTGTCACAG+GGG | - | chr2_3:15194516-15194535 | Msa0280470:intron | 35.0% |
| ATACCTTCAACAAACTCGTA+AGG | + | chr2_3:15194548-15194567 | None:intergenic | 35.0% | |
| ! | TGTTGAAGGTATGAAGAAGA+AGG | - | chr2_3:15194556-15194575 | Msa0280470:intron | 35.0% |
| ! | GTTGAAGGTATGAAGAAGAA+GGG | - | chr2_3:15194557-15194576 | Msa0280470:intron | 35.0% |
| !!! | TTGGTTTTGCTTTGTGAATC+AGG | - | chr2_3:15194693-15194712 | Msa0280470:intron | 35.0% |
| TGTGAATCAGGATCAAGAAT+AGG | - | chr2_3:15194705-15194724 | Msa0280470:intron | 35.0% | |
| GTGAATCAGGATCAAGAATA+GGG | - | chr2_3:15194706-15194725 | Msa0280470:intron | 35.0% | |
| AGTGTAGGTTTCAACTTGAA+CGG | + | chr2_3:15194810-15194829 | None:intergenic | 35.0% | |
| CTTAATGTAGATGGTGCAAT+TGG | - | chr2_3:15194854-15194873 | Msa0280470:intron | 35.0% | |
| GTTGAGATTGGATATCTGAA+TGG | - | chr2_3:15194941-15194960 | Msa0280470:intron | 35.0% | |
| ACGCAATATCAATGACTACT+AGG | + | chr2_3:15195140-15195159 | None:intergenic | 35.0% | |
| TGTACTCTACACAAAATGAG+AGG | - | chr2_3:15195275-15195294 | Msa0280470:intron | 35.0% | |
| GTACTCTACACAAAATGAGA+GGG | - | chr2_3:15195276-15195295 | Msa0280470:intron | 35.0% | |
| ATCATTCTAGCAAATTTCGG+AGG | + | chr2_3:15195362-15195381 | None:intergenic | 35.0% | |
| ! | TGAACCATAGAAGCTTTTCA+TGG | + | chr2_3:15195599-15195618 | None:intergenic | 35.0% |
| CTCTCATGTAGAATAATACC+TGG | - | chr2_3:15195630-15195649 | Msa0280470:five_prime_UTR | 35.0% | |
| TTGGTTAGATCAGATGGATG+GGG | + | chr2_3:15189712-15189731 | None:intergenic | 40.0% | |
| GTTGGTTAGATCAGATGGAT+GGG | + | chr2_3:15189713-15189732 | None:intergenic | 40.0% | |
| ! | TGTTGGTTAGATCAGATGGA+TGG | + | chr2_3:15189714-15189733 | None:intergenic | 40.0% |
| !! | TTGGTGTTGGTTAGATCAGA+TGG | + | chr2_3:15189718-15189737 | None:intergenic | 40.0% |
| ATATATAAGGCGAGTAGTGG+TGG | + | chr2_3:15189785-15189804 | None:intergenic | 40.0% | |
| GTGAAACAGAGAAGAAGAGT+GGG | + | chr2_3:15189853-15189872 | None:intergenic | 40.0% | |
| !! | GGTGGTTTGGTGTAATTGTA+AGG | - | chr2_3:15190101-15190120 | Msa0280470:intron | 40.0% |
| GTCATAACTGTGTGGTTAGT+TGG | - | chr2_3:15190130-15190149 | Msa0280470:intron | 40.0% | |
| GATTGAACGACTATGAATGC+GGG | + | chr2_3:15190351-15190370 | None:intergenic | 40.0% | |
| GGTTTGTCAACAGATAGATC+TGG | - | chr2_3:15190816-15190835 | Msa0280470:intron | 40.0% | |
| AGTACGGGAGAATAATTGTC+CGG | + | chr2_3:15190858-15190877 | None:intergenic | 40.0% | |
| AAAACAGAGCTTGCGTAGTA+CGG | + | chr2_3:15190874-15190893 | None:intergenic | 40.0% | |
| AGTTGCCGGAATAATTAACC+CGG | - | chr2_3:15191077-15191096 | Msa0280470:intron | 40.0% | |
| TGAACCCGGGTTAATTATTC+CGG | + | chr2_3:15191085-15191104 | None:intergenic | 40.0% | |
| ATAATTAACCCGGGTTCAGA+AGG | - | chr2_3:15191087-15191106 | Msa0280470:intron | 40.0% | |
| ! | TTTGAAATCCTTCTGAACCC+GGG | + | chr2_3:15191098-15191117 | None:intergenic | 40.0% |
| ACACATACGTAGCATGAACT+GGG | + | chr2_3:15191152-15191171 | None:intergenic | 40.0% | |
| AACACATACGTAGCATGAAC+TGG | + | chr2_3:15191153-15191172 | None:intergenic | 40.0% | |
| ! | AGTTGGTTACTTGGTAGTCA+TGG | + | chr2_3:15191217-15191236 | None:intergenic | 40.0% |
| GCACTGCATATAGATCAACT+TGG | + | chr2_3:15191656-15191675 | None:intergenic | 40.0% | |
| GGCATATGCAATCAATTGCT+TGG | + | chr2_3:15191762-15191781 | None:intergenic | 40.0% | |
| AGCAATTGATTGCATATGCC+CGG | - | chr2_3:15191762-15191781 | Msa0280470:CDS | 40.0% | |
| ATATGCCCGGTCAAACAATA+AGG | - | chr2_3:15191775-15191794 | Msa0280470:CDS | 40.0% | |
| TCACCACCTTATTGTTTGAC+CGG | + | chr2_3:15191784-15191803 | None:intergenic | 40.0% | |
| ! | ATGGTTTGGCAGGTTGTTAT+TGG | - | chr2_3:15191869-15191888 | Msa0280470:intron | 40.0% |
| ! | TTTAAAATCGGTGACACAGC+TGG | - | chr2_3:15191926-15191945 | Msa0280470:intron | 40.0% |
| TGCAACAGGACAGATTGAAA+TGG | - | chr2_3:15192304-15192323 | Msa0280470:CDS | 40.0% | |
| !! | GCTCTTTGATTCTTTTGGGA+AGG | + | chr2_3:15192408-15192427 | None:intergenic | 40.0% |
| GTGCATAATGTATGCATGGA+TGG | - | chr2_3:15192555-15192574 | Msa0280470:intron | 40.0% | |
| ! | GAGACTACCTTTTGAATTGC+AGG | - | chr2_3:15192587-15192606 | Msa0280470:intron | 40.0% |
| ! | TACCTTTTGAATTGCAGGGT+GGG | - | chr2_3:15192592-15192611 | Msa0280470:intron | 40.0% |
| ACGGTTTAACAACATACCAC+AGG | - | chr2_3:15192838-15192857 | Msa0280470:intron | 40.0% | |
| TTCTTTGTCAATGACCTGTC+TGG | - | chr2_3:15192941-15192960 | Msa0280470:intron | 40.0% | |
| TTAGTGGAAGCCCTAAAACA+AGG | - | chr2_3:15193037-15193056 | Msa0280470:intron | 40.0% | |
| TAGTGGAAGCCCTAAAACAA+GGG | - | chr2_3:15193038-15193057 | Msa0280470:intron | 40.0% | |
| !!! | GGTCACTTTCCCTTGTTTTA+GGG | + | chr2_3:15193050-15193069 | None:intergenic | 40.0% |
| !!! | TGGTCACTTTCCCTTGTTTT+AGG | + | chr2_3:15193051-15193070 | None:intergenic | 40.0% |
| AATCAAGCACTAAGAGAAGC+TGG | - | chr2_3:15193282-15193301 | Msa0280470:intron | 40.0% | |
| AGGGAAAATTACACCAGTGA+AGG | - | chr2_3:15193492-15193511 | Msa0280470:intron | 40.0% | |
| CACTCTTGATTGCAGTGTTA+AGG | + | chr2_3:15193546-15193565 | None:intergenic | 40.0% | |
| CTTAACACTGCAATCAAGAG+TGG | - | chr2_3:15193544-15193563 | Msa0280470:CDS | 40.0% | |
| ! | CCCAATATTTTGCAAAGGTG+AGG | - | chr2_3:15193712-15193731 | Msa0280470:intron | 40.0% |
| ! | ATTGAAAAGGGCTTTGGTGT+TGG | - | chr2_3:15193770-15193789 | Msa0280470:intron | 40.0% |
| ! | ATCATGTTATGTGCCGATCA+CGG | - | chr2_3:15194044-15194063 | Msa0280470:intron | 40.0% |
| ACAATACTATTGTGACAGCG+AGG | - | chr2_3:15194087-15194106 | Msa0280470:intron | 40.0% | |
| CAATACTATTGTGACAGCGA+GGG | - | chr2_3:15194088-15194107 | Msa0280470:intron | 40.0% | |
| GTATTTACCTGATACGAGAC+TGG | + | chr2_3:15194132-15194151 | None:intergenic | 40.0% | |
| TCAGGTAAATACATGCCGTT+TGG | - | chr2_3:15194140-15194159 | Msa0280470:intron | 40.0% | |
| TTACAATCGGTCCACGATTT+GGG | - | chr2_3:15194266-15194285 | Msa0280470:intron | 40.0% | |
| ATATGTGTGTTTGTGGGGAA+GGG | + | chr2_3:15194466-15194485 | None:intergenic | 40.0% | |
| GAAGCATATGTGTGTTTGTG+GGG | + | chr2_3:15194471-15194490 | None:intergenic | 40.0% | |
| !! | ACACCTTACGAGTTTGTTGA+AGG | - | chr2_3:15194542-15194561 | Msa0280470:intron | 40.0% |
| CTGTTCTTAGATCTTCTTGC+TGG | - | chr2_3:15194881-15194900 | Msa0280470:intron | 40.0% | |
| TTAGATCTTCTTGCTGGTAG+TGG | - | chr2_3:15194887-15194906 | Msa0280470:intron | 40.0% | |
| TTTGTTCTTGCACGATCCAT+TGG | - | chr2_3:15194968-15194987 | Msa0280470:intron | 40.0% | |
| !! | ATTTCGGTTGAAGAGCACTT+AGG | - | chr2_3:15195029-15195048 | Msa0280470:intron | 40.0% |
| CTTCAATCTCTTCTGGTCAA+AGG | + | chr2_3:15195226-15195245 | None:intergenic | 40.0% | |
| !!! | TGAGAGGGTTTTTTTATGGC+TGG | - | chr2_3:15195291-15195310 | Msa0280470:intron | 40.0% |
| TTCTGATCTCTGTTCTGTTG+TGG | - | chr2_3:15195509-15195528 | Msa0280470:five_prime_UTR | 40.0% | |
| AGTACAACAGCAACACATGT+AGG | + | chr2_3:15195566-15195585 | None:intergenic | 40.0% | |
| TCCACCATGAAAAGCTTCTA+TGG | - | chr2_3:15195592-15195611 | Msa0280470:five_prime_UTR | 40.0% | |
| ! | ACCATAGAAGCTTTTCATGG+TGG | + | chr2_3:15195596-15195615 | None:intergenic | 40.0% |
| AACAGAGAAGAAGAGTGGGT+GGG | + | chr2_3:15189849-15189868 | None:intergenic | 45.0% | |
| AAACAGAGAAGAAGAGTGGG+TGG | + | chr2_3:15189850-15189869 | None:intergenic | 45.0% | |
| GGTGAAACAGAGAAGAAGAG+TGG | + | chr2_3:15189854-15189873 | None:intergenic | 45.0% | |
| TAATGAGGCTGTCAACTGTG+AGG | - | chr2_3:15190307-15190326 | Msa0280470:intron | 45.0% | |
| AAGATCAGACTGCGTGAATG+CGG | - | chr2_3:15190447-15190466 | Msa0280470:CDS | 45.0% | |
| TGCGGGAAAATCCCAATTGT+CGG | - | chr2_3:15190465-15190484 | Msa0280470:CDS | 45.0% | |
| TTGAGGTTCTCCCGACAATT+GGG | + | chr2_3:15190479-15190498 | None:intergenic | 45.0% | |
| ! | TTTGAGGTTCTCCCGACAAT+TGG | + | chr2_3:15190480-15190499 | None:intergenic | 45.0% |
| !! | TGGTTCTAAATCATGGCCAC+CGG | - | chr2_3:15190836-15190855 | Msa0280470:intron | 45.0% |
| AAACAGAGCTTGCGTAGTAC+GGG | + | chr2_3:15190873-15190892 | None:intergenic | 45.0% | |
| AAATCAAGCATCCGCTGGAT+GGG | + | chr2_3:15190914-15190933 | None:intergenic | 45.0% | |
| AAAATCAAGCATCCGCTGGA+TGG | + | chr2_3:15190915-15190934 | None:intergenic | 45.0% | |
| AGTCAAAATCAAGCATCCGC+TGG | + | chr2_3:15190919-15190938 | None:intergenic | 45.0% | |
| AGAGAAACACCATCAGTTGC+CGG | - | chr2_3:15191063-15191082 | Msa0280470:intron | 45.0% | |
| GTTGCCGGAATAATTAACCC+GGG | - | chr2_3:15191078-15191097 | Msa0280470:intron | 45.0% | |
| ATACGTAGCATGAACTGGGA+TGG | + | chr2_3:15191148-15191167 | None:intergenic | 45.0% | |
| TTGATGAAGACATCGGCAGT+AGG | + | chr2_3:15191334-15191353 | None:intergenic | 45.0% | |
| !! | AATTGCTTGGTGTCTGACTC+GGG | + | chr2_3:15191749-15191768 | None:intergenic | 45.0% |
| !! | CAATTGCTTGGTGTCTGACT+CGG | + | chr2_3:15191750-15191769 | None:intergenic | 45.0% |
| CACCACCTTATTGTTTGACC+GGG | + | chr2_3:15191783-15191802 | None:intergenic | 45.0% | |
| ! | TTTAGTGGTCATGGTTTGGC+AGG | - | chr2_3:15191859-15191878 | Msa0280470:intron | 45.0% |
| TAATCCAGTCCAAGCTCTAC+AGG | - | chr2_3:15191963-15191982 | Msa0280470:CDS | 45.0% | |
| GAAACGAATCCAACAGATCC+AGG | + | chr2_3:15191989-15192008 | None:intergenic | 45.0% | |
| AAATTCATGCTGCAGCTACG+TGG | + | chr2_3:15192088-15192107 | None:intergenic | 45.0% | |
| ! | GTCCCCAGCAAAGTATCTTA+AGG | + | chr2_3:15192434-15192453 | None:intergenic | 45.0% |
| !! | TATGCATGGATGGTTCTGAG+AGG | - | chr2_3:15192565-15192584 | Msa0280470:intron | 45.0% |
| ! | CTACCTTTTGAATTGCAGGG+TGG | - | chr2_3:15192591-15192610 | Msa0280470:intron | 45.0% |
| ATCCCACCCTGCAATTCAAA+AGG | + | chr2_3:15192597-15192616 | None:intergenic | 45.0% | |
| TCCATTGCCCGTGTAACTAA+TGG | - | chr2_3:15192636-15192655 | Msa0280470:intron | 45.0% | |
| ! | GCTATAGGCATTGCAATTGG+AGG | - | chr2_3:15192776-15192795 | Msa0280470:intron | 45.0% |
| ! | ATTGGAGGAGATGTTTTCCC+CGG | - | chr2_3:15192791-15192810 | Msa0280470:intron | 45.0% |
| ATGGTCAGATAGAGTGGAAC+CGG | + | chr2_3:15192813-15192832 | None:intergenic | 45.0% | |
| ATAGTAGTGCTTGGAGAGCT+TGG | - | chr2_3:15192995-15193014 | Msa0280470:intron | 45.0% | |
| AATCAGGGAGCTAAAAGTGG+CGG | - | chr2_3:15193234-15193253 | Msa0280470:intron | 45.0% | |
| AGCTAAAAGTGGCGGTGATA+TGG | - | chr2_3:15193242-15193261 | Msa0280470:intron | 45.0% | |
| GTGATATGGAGTCTGCTCAA+GGG | - | chr2_3:15193256-15193275 | Msa0280470:intron | 45.0% | |
| GGAGGAGTAAATTCCTTCAC+TGG | + | chr2_3:15193508-15193527 | None:intergenic | 45.0% | |
| TTAAGGTCCTCAGGGATTTG+TGG | + | chr2_3:15193529-15193548 | None:intergenic | 45.0% | |
| TTGCAGTGTTAAGGTCCTCA+GGG | + | chr2_3:15193537-15193556 | None:intergenic | 45.0% | |
| ATTGCAGTGTTAAGGTCCTC+AGG | + | chr2_3:15193538-15193557 | None:intergenic | 45.0% | |
| TCCACCATTTCTGATGACAG+AGG | - | chr2_3:15193595-15193614 | Msa0280470:CDS | 45.0% | |
| ACCTCTGTCATCAGAAATGG+TGG | + | chr2_3:15193599-15193618 | None:intergenic | 45.0% | |
| CTCACCTCTGTCATCAGAAA+TGG | + | chr2_3:15193602-15193621 | None:intergenic | 45.0% | |
| ! | ATTGAGTACAGTAACGGGGT+AGG | + | chr2_3:15193829-15193848 | None:intergenic | 45.0% |
| CTGATACGAGACTGGAAACT+AGG | + | chr2_3:15194124-15194143 | None:intergenic | 45.0% | |
| CTAGTTTCCAGTCTCGTATC+AGG | - | chr2_3:15194122-15194141 | Msa0280470:intron | 45.0% | |
| CTTACAATCGGTCCACGATT+TGG | - | chr2_3:15194265-15194284 | Msa0280470:intron | 45.0% | |
| TACAATCGGTCCACGATTTG+GGG | - | chr2_3:15194267-15194286 | Msa0280470:intron | 45.0% | |
| ACTTCAAGGATGCTCATGAC+AGG | - | chr2_3:15194314-15194333 | Msa0280470:intron | 45.0% | |
| CTTCAAGGATGCTCATGACA+GGG | - | chr2_3:15194315-15194334 | Msa0280470:intron | 45.0% | |
| TATGTGTGTTTGTGGGGAAG+GGG | + | chr2_3:15194465-15194484 | None:intergenic | 45.0% | |
| CATATGTGTGTTTGTGGGGA+AGG | + | chr2_3:15194467-15194486 | None:intergenic | 45.0% | |
| GAAGAAGAAGGGAATTCGTG+TGG | - | chr2_3:15194568-15194587 | Msa0280470:intron | 45.0% | |
| GAATTCGTGTGGCAGGAATA+GGG | - | chr2_3:15194579-15194598 | Msa0280470:intron | 45.0% | |
| TGAAACCTACACTCTCACCA+AGG | - | chr2_3:15194817-15194836 | Msa0280470:intron | 45.0% | |
| ! | ATTTGCCTTGGTGAGAGTGT+AGG | + | chr2_3:15194825-15194844 | None:intergenic | 45.0% |
| AACTTACCCGATCAGACCAA+TGG | + | chr2_3:15194987-15195006 | None:intergenic | 45.0% | |
| ACTTCTTAGTGGGAGCTCTT+TGG | + | chr2_3:15195109-15195128 | None:intergenic | 45.0% | |
| AGAGCTCCCACTAAGAAGTT+AGG | - | chr2_3:15195110-15195129 | Msa0280470:intron | 45.0% | |
| GGACCACCTAACTTCTTAGT+GGG | + | chr2_3:15195119-15195138 | None:intergenic | 45.0% | |
| AGGACCACCTAACTTCTTAG+TGG | + | chr2_3:15195120-15195139 | None:intergenic | 45.0% | |
| TGTAGAGTACATCCTCCCAT+GGG | + | chr2_3:15195266-15195285 | None:intergenic | 45.0% | |
| ! | CTCTCTCGTGTTGTTGGTGT+TGG | + | chr2_3:15189731-15189750 | None:intergenic | 50.0% |
| CTCTCTCTCTCTCGTGTTGT+TGG | + | chr2_3:15189737-15189756 | None:intergenic | 50.0% | |
| CAACACGAGAGAGAGAGAGA+AGG | - | chr2_3:15189738-15189757 | Msa0280470:three_prime_UTR | 50.0% | |
| AGATCAGACTGCGTGAATGC+GGG | - | chr2_3:15190448-15190467 | Msa0280470:CDS | 50.0% | |
| GCGGGAAAATCCCAATTGTC+GGG | - | chr2_3:15190466-15190485 | Msa0280470:CDS | 50.0% | |
| ACGGGAGAATAATTGTCCGG+TGG | + | chr2_3:15190855-15190874 | None:intergenic | 50.0% | |
| AGAGCAGATACACACCGCAA+AGG | + | chr2_3:15190943-15190962 | None:intergenic | 50.0% | |
| CAAAGCAGCCATGGATGATG+CGG | + | chr2_3:15191681-15191700 | None:intergenic | 50.0% | |
| TGCCCGGTCAAACAATAAGG+TGG | - | chr2_3:15191778-15191797 | Msa0280470:CDS | 50.0% | |
| GCCATTAGTTACACGGGCAA+TGG | + | chr2_3:15192640-15192659 | None:intergenic | 50.0% | |
| TGGTCAGATAGAGTGGAACC+GGG | + | chr2_3:15192812-15192831 | None:intergenic | 50.0% | |
| TAGTGCTTGGAGAGCTTGGT+GGG | - | chr2_3:15192999-15193018 | Msa0280470:intron | 50.0% | |
| TGACCAAACCTGTTGTTGCC+TGG | - | chr2_3:15193065-15193084 | Msa0280470:intron | 50.0% | |
| GACCAAACCTGTTGTTGCCT+GGG | - | chr2_3:15193066-15193085 | Msa0280470:intron | 50.0% | |
| AACCCAGGCAACAACAGGTT+TGG | + | chr2_3:15193071-15193090 | None:intergenic | 50.0% | |
| TGCACAAGTTCCACTAACCC+AGG | + | chr2_3:15193086-15193105 | None:intergenic | 50.0% | |
| GGTGATATGGAGTCTGCTCA+AGG | - | chr2_3:15193255-15193274 | Msa0280470:intron | 50.0% | |
| TACTCCTCCACAAATCCCTG+AGG | - | chr2_3:15193519-15193538 | Msa0280470:intron | 50.0% | |
| ATGGGTACACCAGCATAGCA+TGG | + | chr2_3:15193740-15193759 | None:intergenic | 50.0% | |
| AGAGACACAAGGACCGTGAT+CGG | + | chr2_3:15194060-15194079 | None:intergenic | 50.0% | |
| TTGTGAGCACCAGAGACACA+AGG | + | chr2_3:15194071-15194090 | None:intergenic | 50.0% | |
| ! | ACAATCGGTCCACGATTTGG+GGG | - | chr2_3:15194268-15194287 | Msa0280470:intron | 50.0% |
| GTAGCGAGCAGCATCATCAA+TGG | + | chr2_3:15194296-15194315 | None:intergenic | 50.0% | |
| TGATGCTGCTCGCTACTTCA+AGG | - | chr2_3:15194300-15194319 | Msa0280470:intron | 50.0% | |
| AAGAAGGGAATTCGTGTGGC+AGG | - | chr2_3:15194572-15194591 | Msa0280470:intron | 50.0% | |
| GGAATTCGTGTGGCAGGAAT+AGG | - | chr2_3:15194578-15194597 | Msa0280470:intron | 50.0% | |
| ! | GCACGATCCATTGGTCTGAT+CGG | - | chr2_3:15194977-15194996 | Msa0280470:intron | 50.0% |
| ! | CACGATCCATTGGTCTGATC+GGG | - | chr2_3:15194978-15194997 | Msa0280470:intron | 50.0% |
| GCTCCCACTAAGAAGTTAGG+TGG | - | chr2_3:15195113-15195132 | Msa0280470:intron | 50.0% | |
| GTGGCTGCTTCAATCTCTTC+TGG | + | chr2_3:15195233-15195252 | None:intergenic | 50.0% | |
| GTGTAGAGTACATCCTCCCA+TGG | + | chr2_3:15195267-15195286 | None:intergenic | 50.0% | |
| CAACTGTGAGGACCTCGAGT+CGG | - | chr2_3:15190319-15190338 | Msa0280470:intron | 55.0% | |
| AACTGTGAGGACCTCGAGTC+GGG | - | chr2_3:15190320-15190339 | Msa0280470:intron | 55.0% | |
| ACAAGCAGCTTCCCATCCAG+CGG | - | chr2_3:15190900-15190919 | Msa0280470:intron | 55.0% | |
| AGGCTGCTTCAAAGCAGCCA+TGG | + | chr2_3:15191690-15191709 | None:intergenic | 55.0% | |
| GTTATTGGCCCAGCCACTGT+CGG | - | chr2_3:15191884-15191903 | Msa0280470:intron | 55.0% | |
| AGCTTGAATGCCTCCGACAG+TGG | + | chr2_3:15191900-15191919 | None:intergenic | 55.0% | |
| !! | ACTGTCGGAGGCATTCAAGC+TGG | - | chr2_3:15191899-15191918 | Msa0280470:intron | 55.0% |
| AGATCCAGGCCTGTAGAGCT+TGG | + | chr2_3:15191975-15191994 | None:intergenic | 55.0% | |
| CTCTACAGGCCTGGATCTGT+TGG | - | chr2_3:15191977-15191996 | Msa0280470:CDS | 55.0% | |
| GGTCAGATAGAGTGGAACCG+GGG | + | chr2_3:15192811-15192830 | None:intergenic | 55.0% | |
| GTAGTGCTTGGAGAGCTTGG+TGG | - | chr2_3:15192998-15193017 | Msa0280470:intron | 55.0% | |
| CCACTAACCCAGGCAACAAC+AGG | + | chr2_3:15193076-15193095 | None:intergenic | 55.0% | |
| ! | CCTGTTGTTGCCTGGGTTAG+TGG | - | chr2_3:15193073-15193092 | Msa0280470:intron | 55.0% |
| AGGTCCTCAGGGATTTGTGG+AGG | + | chr2_3:15193526-15193545 | None:intergenic | 55.0% | |
| GATCACGGTCCTTGTGTCTC+TGG | - | chr2_3:15194059-15194078 | Msa0280470:intron | 55.0% | |
| ACTATTGTGACAGCGAGGGC+TGG | - | chr2_3:15194092-15194111 | Msa0280470:intron | 55.0% | |
| CTATTGTGACAGCGAGGGCT+GGG | - | chr2_3:15194093-15194112 | Msa0280470:intron | 55.0% | |
| TCAATGGCACCCCCAAATCG+TGG | + | chr2_3:15194280-15194299 | None:intergenic | 55.0% | |
| AGGTGTAAGCCCCTGTGACA+AGG | + | chr2_3:15194528-15194547 | None:intergenic | 55.0% | |
| AGAGTACATCCTCCCATGGG+TGG | + | chr2_3:15195263-15195282 | None:intergenic | 55.0% | |
| ! | TGCGGGAAAATCCCGACTCG+AGG | + | chr2_3:15190334-15190353 | None:intergenic | 60.0% |
| AGCAGCCATGGATGATGCGG+CGG | + | chr2_3:15191678-15191697 | None:intergenic | 60.0% | |
| GAATGCCTCCGACAGTGGCT+GGG | + | chr2_3:15191895-15191914 | None:intergenic | 60.0% | |
| TGAATGCCTCCGACAGTGGC+TGG | + | chr2_3:15191896-15191915 | None:intergenic | 60.0% | |
| CAGGCCTGTAGAGCTTGGAC+TGG | + | chr2_3:15191970-15191989 | None:intergenic | 60.0% | |
| CAGTCCAAGCTCTACAGGCC+TGG | - | chr2_3:15191968-15191987 | Msa0280470:CDS | 60.0% | |
| GGTGAGGAGCCATGCTATGC+TGG | - | chr2_3:15193728-15193747 | Msa0280470:intron | 60.0% | |
| GTGTGGCAGGAATAGGGCAC+AGG | - | chr2_3:15194585-15194604 | Msa0280470:intron | 60.0% | |
| AGCCACTATACCGCCACCCA+TGG | - | chr2_3:15195247-15195266 | Msa0280470:intron | 60.0% | |
| GCCACTATACCGCCACCCAT+GGG | - | chr2_3:15195248-15195267 | Msa0280470:intron | 60.0% | |
| ! | TCCCATGGGTGGCGGTATAG+TGG | + | chr2_3:15195252-15195271 | None:intergenic | 60.0% |
| ACTATACCGCCACCCATGGG+AGG | - | chr2_3:15195251-15195270 | Msa0280470:intron | 60.0% | |
| GTACATCCTCCCATGGGTGG+CGG | + | chr2_3:15195260-15195279 | None:intergenic | 60.0% | |
| CAGTGCCGCCGCATCATCCA+TGG | - | chr2_3:15191670-15191689 | Msa0280470:intron | 65.0% | |
| ATTGGCCCAGCCACTGTCGG+AGG | - | chr2_3:15191887-15191906 | Msa0280470:intron | 65.0% | |
| TGTGACAGCGAGGGCTGGGA+AGG | - | chr2_3:15194097-15194116 | Msa0280470:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 15189677 | 15195653 | 15189677 | ID=Msa0280470;Name=Msa0280470 |
| chr2_3 | mRNA | 15189677 | 15195653 | 15189677 | ID=Msa0280470-mRNA-1;Parent=Msa0280470;Name=Msa0280470-mRNA-1;_AED=0.11;_eAED=0.11;_QI=248|0.93|0.94|1|0.93|0.88|17|360|609 |
| chr2_3 | exon | 15189677 | 15190112 | 15189677 | ID=Msa0280470-mRNA-1:exon:6357;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15190331 | 15190615 | 15190331 | ID=Msa0280470-mRNA-1:exon:6356;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15190724 | 15190794 | 15190724 | ID=Msa0280470-mRNA-1:exon:6355;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15190994 | 15191070 | 15190994 | ID=Msa0280470-mRNA-1:exon:6354;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15191187 | 15191292 | 15191187 | ID=Msa0280470-mRNA-1:exon:6353;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15191474 | 15191601 | 15191474 | ID=Msa0280470-mRNA-1:exon:6352;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15191714 | 15191846 | 15191714 | ID=Msa0280470-mRNA-1:exon:6351;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15191962 | 15192090 | 15191962 | ID=Msa0280470-mRNA-1:exon:6350;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15192189 | 15192344 | 15192189 | ID=Msa0280470-mRNA-1:exon:6349;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15192471 | 15192547 | 15192471 | ID=Msa0280470-mRNA-1:exon:6348;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15192661 | 15192721 | 15192661 | ID=Msa0280470-mRNA-1:exon:6347;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15193315 | 15193449 | 15193315 | ID=Msa0280470-mRNA-1:exon:6346;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15193531 | 15193657 | 15193531 | ID=Msa0280470-mRNA-1:exon:6345;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15193959 | 15194024 | 15193959 | ID=Msa0280470-mRNA-1:exon:6344;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15194167 | 15194269 | 15194167 | ID=Msa0280470-mRNA-1:exon:6343;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15194383 | 15194501 | 15194383 | ID=Msa0280470-mRNA-1:exon:6342;Parent=Msa0280470-mRNA-1 |
| chr2_3 | exon | 15195425 | 15195653 | 15195425 | ID=Msa0280470-mRNA-1:exon:6341;Parent=Msa0280470-mRNA-1 |
| chr2_3 | five_prime_UTR | 15195425 | 15195653 | 15195425 | ID=Msa0280470-mRNA-1:five_prime_utr;Parent=Msa0280470-mRNA-1 |
| chr2_3 | five_prime_UTR | 15194483 | 15194501 | 15194483 | ID=Msa0280470-mRNA-1:five_prime_utr;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15194383 | 15194482 | 15194383 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15194167 | 15194269 | 15194167 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15193959 | 15194024 | 15193959 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15193531 | 15193657 | 15193531 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15193315 | 15193449 | 15193315 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15192661 | 15192721 | 15192661 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15192471 | 15192547 | 15192471 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15192189 | 15192344 | 15192189 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15191962 | 15192090 | 15191962 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15191714 | 15191846 | 15191714 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15191474 | 15191601 | 15191474 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15191187 | 15191292 | 15191187 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15190994 | 15191070 | 15190994 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15190724 | 15190794 | 15190724 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15190331 | 15190615 | 15190331 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | CDS | 15190037 | 15190112 | 15190037 | ID=Msa0280470-mRNA-1:cds;Parent=Msa0280470-mRNA-1 |
| chr2_3 | three_prime_UTR | 15189677 | 15190036 | 15189677 | ID=Msa0280470-mRNA-1:three_prime_utr;Parent=Msa0280470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
