Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0613700 | XP_003608349.1 | 96.811 | 533 | 17 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1054 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0613700 | sp|Q8H1D7|GTE5_ARATH | 37.995 | 379 | 194 | 10 | 55 | 420 | 49 | 399 | 1.77e-58 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0613700 | G7JU12 | 96.811 | 533 | 17 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1054 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0613700 | Msa0613710 | 0.895784 | 6.897098e-76 | -8.615850e-47 |
| Msa0613700 | Msa0689760 | 0.821364 | 4.200246e-53 | -8.615850e-47 |
| Msa0613700 | Msa0696850 | 0.835829 | 1.336431e-56 | -8.615850e-47 |
| Msa0613700 | Msa0716860 | 0.829952 | 3.859603e-55 | -8.615850e-47 |
| Msa0613700 | Msa0757800 | 0.807044 | 6.126878e-50 | -8.615850e-47 |
| Msa0613700 | Msa1420250 | 0.821447 | 4.018725e-53 | -8.615850e-47 |
| Msa0613700 | Msa1453360 | 0.816433 | 5.544570e-52 | -8.615850e-47 |
| Msa0194860 | Msa0613700 | 0.804707 | 1.898018e-49 | -8.615850e-47 |
| Msa0194890 | Msa0613700 | 0.803594 | 3.235816e-49 | -8.615850e-47 |
| Msa0304100 | Msa0613700 | 0.811467 | 6.900620e-51 | -8.615850e-47 |
| Msa0559500 | Msa0613700 | 0.836943 | 6.958095e-57 | -8.615850e-47 |
| Msa0559510 | Msa0613700 | 0.885649 | 6.778397e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0613700 | MtrunA17_Chr4g0049491 | 96.811 | 533 | 17 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1054 |
| Msa0613700 | MtrunA17_Chr4g0049471 | 82.746 | 539 | 44 | 6 | 1 | 533 | 1 | 496 | 0.0 | 811 |
| Msa0613700 | MtrunA17_Chr2g0325391 | 46.667 | 285 | 124 | 6 | 141 | 425 | 293 | 549 | 3.12e-68 | 233 |
| Msa0613700 | MtrunA17_Chr4g0040981 | 45.139 | 288 | 114 | 8 | 145 | 425 | 656 | 906 | 2.67e-64 | 226 |
| Msa0613700 | MtrunA17_Chr2g0325411 | 43.878 | 294 | 119 | 8 | 141 | 425 | 304 | 560 | 5.03e-64 | 220 |
| Msa0613700 | MtrunA17_Chr3g0116311 | 28.041 | 485 | 226 | 15 | 51 | 487 | 79 | 488 | 8.84e-42 | 160 |
| Msa0613700 | MtrunA17_Chr7g0230041 | 32.277 | 347 | 163 | 11 | 145 | 487 | 183 | 461 | 2.42e-35 | 141 |
| Msa0613700 | MtrunA17_Chr6g0462121 | 27.182 | 401 | 225 | 12 | 74 | 460 | 2 | 349 | 8.57e-29 | 117 |
| Msa0613700 | MtrunA17_Chr2g0285151 | 40.571 | 175 | 91 | 5 | 95 | 266 | 29 | 193 | 9.42e-27 | 114 |
| Msa0613700 | MtrunA17_Chr7g0230031 | 51.190 | 84 | 36 | 1 | 145 | 228 | 198 | 276 | 1.24e-21 | 99.0 |
| Msa0613700 | MtrunA17_Chr8g0369041 | 38.732 | 142 | 77 | 6 | 109 | 245 | 56 | 192 | 4.02e-21 | 95.1 |
| Msa0613700 | MtrunA17_Chr2g0296681 | 44.444 | 81 | 42 | 2 | 167 | 244 | 97 | 177 | 2.04e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0613700 | AT1G73150.2 | 38.287 | 397 | 208 | 9 | 37 | 429 | 23 | 386 | 3.51e-63 | 213 |
| Msa0613700 | AT1G17790.1 | 37.995 | 379 | 194 | 10 | 55 | 420 | 49 | 399 | 1.80e-59 | 204 |
| Msa0613700 | AT1G73150.1 | 34.461 | 473 | 246 | 11 | 37 | 504 | 23 | 436 | 2.23e-55 | 193 |
| Msa0613700 | AT1G06230.2 | 42.647 | 272 | 133 | 6 | 144 | 414 | 421 | 670 | 5.71e-54 | 195 |
| Msa0613700 | AT1G06230.4 | 42.647 | 272 | 133 | 6 | 144 | 414 | 421 | 670 | 5.71e-54 | 195 |
| Msa0613700 | AT1G06230.1 | 42.647 | 272 | 133 | 6 | 144 | 414 | 421 | 670 | 5.71e-54 | 195 |
| Msa0613700 | AT1G06230.3 | 42.647 | 272 | 133 | 6 | 144 | 414 | 421 | 670 | 5.71e-54 | 195 |
| Msa0613700 | AT5G65630.1 | 58.940 | 151 | 54 | 1 | 337 | 487 | 390 | 532 | 2.74e-47 | 174 |
| Msa0613700 | AT5G10550.1 | 54.667 | 150 | 61 | 2 | 337 | 486 | 385 | 527 | 1.16e-41 | 158 |
| Msa0613700 | AT5G14270.2 | 30.543 | 442 | 218 | 14 | 77 | 503 | 64 | 431 | 4.64e-40 | 154 |
| Msa0613700 | AT5G14270.3 | 30.543 | 442 | 218 | 14 | 77 | 503 | 64 | 431 | 5.16e-40 | 154 |
| Msa0613700 | AT5G14270.1 | 30.543 | 442 | 218 | 14 | 77 | 503 | 64 | 431 | 5.16e-40 | 154 |
| Msa0613700 | AT5G63320.3 | 29.241 | 448 | 227 | 15 | 64 | 487 | 60 | 441 | 1.30e-39 | 150 |
| Msa0613700 | AT5G63320.2 | 29.241 | 448 | 227 | 15 | 64 | 487 | 60 | 441 | 1.30e-39 | 150 |
| Msa0613700 | AT5G63320.1 | 29.241 | 448 | 227 | 15 | 64 | 487 | 60 | 441 | 5.48e-38 | 149 |
| Msa0613700 | AT3G27260.4 | 32.059 | 340 | 154 | 11 | 145 | 482 | 177 | 441 | 2.03e-33 | 135 |
| Msa0613700 | AT3G27260.1 | 32.059 | 340 | 154 | 11 | 145 | 482 | 177 | 441 | 2.41e-33 | 135 |
| Msa0613700 | AT3G27260.3 | 32.059 | 340 | 154 | 11 | 145 | 482 | 177 | 441 | 3.72e-33 | 135 |
| Msa0613700 | AT3G01770.2 | 32.277 | 347 | 160 | 11 | 145 | 487 | 130 | 405 | 4.12e-33 | 132 |
| Msa0613700 | AT3G27260.2 | 31.871 | 342 | 152 | 12 | 145 | 482 | 128 | 392 | 4.43e-33 | 134 |
| Msa0613700 | AT3G01770.1 | 31.892 | 370 | 177 | 11 | 145 | 510 | 130 | 428 | 1.83e-32 | 132 |
| Msa0613700 | AT5G46550.1 | 40.741 | 135 | 67 | 2 | 148 | 282 | 73 | 194 | 3.69e-24 | 106 |
| Msa0613700 | AT3G52280.1 | 26.642 | 274 | 150 | 6 | 143 | 411 | 93 | 320 | 9.21e-24 | 103 |
| Msa0613700 | AT3G52280.2 | 24.031 | 387 | 213 | 11 | 42 | 411 | 15 | 337 | 9.66e-24 | 103 |
| Msa0613700 | AT2G34900.1 | 26.852 | 324 | 184 | 7 | 143 | 460 | 109 | 385 | 6.42e-23 | 101 |
| Msa0613700 | AT2G34900.2 | 27.575 | 301 | 170 | 5 | 166 | 460 | 17 | 275 | 2.20e-22 | 97.4 |
| Msa0613700 | AT1G58025.6 | 36.036 | 111 | 61 | 3 | 134 | 243 | 209 | 310 | 3.96e-11 | 65.9 |
| Msa0613700 | AT1G58025.1 | 36.036 | 111 | 61 | 3 | 134 | 243 | 209 | 310 | 3.96e-11 | 65.9 |
| Msa0613700 | AT1G58025.4 | 36.036 | 111 | 61 | 3 | 134 | 243 | 209 | 310 | 4.14e-11 | 65.9 |
| Msa0613700 | AT1G58025.5 | 36.036 | 111 | 61 | 3 | 134 | 243 | 209 | 310 | 4.14e-11 | 65.9 |
| Msa0613700 | AT1G58025.3 | 36.036 | 111 | 61 | 3 | 134 | 243 | 209 | 310 | 4.14e-11 | 65.9 |
| Msa0613700 | AT1G58025.2 | 36.036 | 111 | 61 | 3 | 134 | 243 | 209 | 310 | 4.82e-11 | 65.9 |
Find 156 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATTCATTTCCCTCTTATT+TGG | 0.124253 | 4_2:+62527777 | None:intergenic |
| CTTTGGCTTGGGCTGCTTCA+AGG | 0.184318 | 4_2:+62527809 | None:intergenic |
| TTCAAAGCCGTTGCATTTAC+AGG | 0.229221 | 4_2:+62528299 | None:intergenic |
| CCTCTGTGTTGCAGCCAATT+TGG | 0.258953 | 4_2:+62528779 | None:intergenic |
| ACCCTCTCCCTTTCCCTCTC+TGG | 0.292850 | 4_2:+62527996 | None:intergenic |
| TTGTTACTAAATTTAGGGTT+AGG | 0.292960 | 4_2:+62528722 | None:intergenic |
| TCCAGTGGCTCCAGCAGTTC+TGG | 0.296431 | 4_2:-62527205 | Msa0613700:CDS |
| TCAGGGAGCAAGAAGGTTTC+CGG | 0.305508 | 4_2:-62528467 | Msa0613700:CDS |
| GAGTCTTAAGCTGACGAATT+TGG | 0.320746 | 4_2:+62528552 | None:intergenic |
| GGATCCCTGGCCTTTGGCTT+GGG | 0.322222 | 4_2:+62527798 | None:intergenic |
| TTCCCTCTTATTTGGATCCC+TGG | 0.326630 | 4_2:+62527785 | None:intergenic |
| TGGATCCCTGGCCTTTGGCT+TGG | 0.328127 | 4_2:+62527797 | None:intergenic |
| TTTGGCTTGGGCTGCTTCAA+GGG | 0.331789 | 4_2:+62527810 | None:intergenic |
| GCATCAACCTTCTCCCTATC+AGG | 0.335506 | 4_2:+62527382 | None:intergenic |
| TCGGATTCAGGGAGTTCTTC+AGG | 0.341320 | 4_2:-62527076 | Msa0613700:CDS |
| TCACTGGAAGTGCTCGCGTT+GGG | 0.343551 | 4_2:+62527835 | None:intergenic |
| TTATTTGGATCCCTGGCCTT+TGG | 0.344705 | 4_2:+62527792 | None:intergenic |
| ACCCCATTGCCTTTGTTTGA+AGG | 0.345351 | 4_2:+62527516 | None:intergenic |
| CGAACTGGTGACTGAGCTAA+TGG | 0.347363 | 4_2:+62527867 | None:intergenic |
| GGCTGCTTCAAGGGCTTCAC+TGG | 0.348486 | 4_2:+62527819 | None:intergenic |
| ACCACCGTTGTGGTTTAGCC+TGG | 0.356873 | 4_2:+62528505 | None:intergenic |
| ACCGGTGGAGGGATTGGAAT+TGG | 0.357465 | 4_2:+62527957 | None:intergenic |
| GATTGAGAAAGATAAAGATA+TGG | 0.363334 | 4_2:-62527257 | Msa0613700:CDS |
| CCAACGGTAACGAACCAAAT+TGG | 0.367917 | 4_2:-62528793 | Msa0613700:CDS |
| CAGGCTCAGGCAGTGGCTCT+TGG | 0.369449 | 4_2:+62527925 | None:intergenic |
| AATTAAGCATCCTATGGATC+TGG | 0.371201 | 4_2:-62528255 | Msa0613700:CDS |
| GATTAAGCGGCAGGCGCTAA+TGG | 0.380098 | 4_2:-62527553 | Msa0613700:CDS |
| AAGAAATCAAAGTCAGAGAT+TGG | 0.382024 | 4_2:-62528410 | Msa0613700:CDS |
| TCATCAAATTTCTCGTGTAT+TGG | 0.386676 | 4_2:+62528068 | None:intergenic |
| CTGTTGACACAGAGACTCTC+TGG | 0.394963 | 4_2:-62527620 | Msa0613700:CDS |
| CTTGCTCCCTGATTTCTTAG+TGG | 0.395685 | 4_2:+62528478 | None:intergenic |
| TTGCTCCCTGATTTCTTAGT+GGG | 0.400065 | 4_2:+62528479 | None:intergenic |
| GGTGGTCCCACTAAGAAATC+AGG | 0.406385 | 4_2:-62528485 | Msa0613700:CDS |
| TTTGCTACCGGTGGAGGGAT+TGG | 0.415792 | 4_2:+62527951 | None:intergenic |
| CTTAAGACTCGAATTGAATC+AGG | 0.417831 | 4_2:-62528539 | Msa0613700:CDS |
| TGCCTTCAAACAAAGGCAAT+GGG | 0.422340 | 4_2:-62527518 | Msa0613700:CDS |
| AGGAAAAGGTCGTTTGTTGC+CGG | 0.425299 | 4_2:+62528448 | None:intergenic |
| AAGGAAGAGAAATGGGCATT+TGG | 0.428825 | 4_2:-62527679 | Msa0613700:CDS |
| TTCTGCTTCTTCCCCTCAGA+AGG | 0.429158 | 4_2:+62527352 | None:intergenic |
| TTGATCGATTGGTTACCAAT+TGG | 0.429518 | 4_2:-62527593 | Msa0613700:CDS |
| ACAGGTGGGAAATTGTTTGC+TGG | 0.431814 | 4_2:+62527283 | None:intergenic |
| CTAAATTTAGGGTTAGGGTT+AGG | 0.433996 | 4_2:+62528728 | None:intergenic |
| AGAAATCAAAGTCAGAGATT+GGG | 0.434900 | 4_2:-62528409 | Msa0613700:CDS |
| GGATGAGATTGAGCTTGATA+TGG | 0.436408 | 4_2:-62527646 | Msa0613700:CDS |
| ATTTATAGGAATTGCCTGAT+AGG | 0.436557 | 4_2:-62527396 | Msa0613700:intron |
| TGTTACTAAATTTAGGGTTA+GGG | 0.446081 | 4_2:+62528723 | None:intergenic |
| AGGCGGTGGAGCTGAATTCA+TGG | 0.450284 | 4_2:-62528759 | Msa0613700:CDS |
| TGATATAATTAAGCATCCTA+TGG | 0.454884 | 4_2:-62528261 | Msa0613700:CDS |
| ATGGGCATTTGGAGCAAGAT+GGG | 0.463782 | 4_2:-62527668 | Msa0613700:CDS |
| AATTCCCTCACCGCAGGAAA+AGG | 0.468461 | 4_2:+62528434 | None:intergenic |
| AACAGGTAGTGCAGATCATA+AGG | 0.470734 | 4_2:-62527698 | Msa0613700:CDS |
| GATAAAGATATGGGTGCTAC+TGG | 0.470996 | 4_2:-62527247 | Msa0613700:CDS |
| GCTTCTTCCCCTCAGAAGGA+GGG | 0.472060 | 4_2:+62527356 | None:intergenic |
| TGGAAGTGCTCGCGTTGGGG+AGG | 0.475254 | 4_2:+62527839 | None:intergenic |
| TGCTTCTTCCCCTCAGAAGG+AGG | 0.477582 | 4_2:+62527355 | None:intergenic |
| TTCACTGGAAGTGCTCGCGT+TGG | 0.478335 | 4_2:+62527834 | None:intergenic |
| AGCAGCCCAAGCCAAAGGCC+AGG | 0.478818 | 4_2:-62527803 | Msa0613700:CDS |
| ACTACCTGTTCCATCTTCTC+TGG | 0.479486 | 4_2:+62527711 | None:intergenic |
| ACCAGAACTGCTGGAGCCAC+TGG | 0.480494 | 4_2:+62527204 | None:intergenic |
| GTGTTAACATCATGGCCCTT+GGG | 0.480899 | 4_2:+62528134 | None:intergenic |
| AGGCCAGGGATCCAAATAAG+AGG | 0.482051 | 4_2:-62527788 | Msa0613700:CDS |
| GGGGATTCGAAGTGCTTGGC+TGG | 0.485173 | 4_2:+62527889 | None:intergenic |
| TTATCTTTCTCAATCTCCAC+AGG | 0.486073 | 4_2:+62527265 | None:intergenic |
| CCAATTTGGTTCGTTACCGT+TGG | 0.486429 | 4_2:+62528793 | None:intergenic |
| AGAGATTGGGGATGCGATGA+AGG | 0.491863 | 4_2:-62528396 | Msa0613700:CDS |
| CAGATCATAAGGAAGAGAAA+TGG | 0.492121 | 4_2:-62527687 | Msa0613700:CDS |
| GTACTAGCAGGCTCAGGCAG+TGG | 0.495175 | 4_2:+62527918 | None:intergenic |
| GCCACCAGAGAAGATGGAAC+AGG | 0.495605 | 4_2:-62527715 | Msa0613700:CDS |
| AGATCATAAGGAAGAGAAAT+GGG | 0.498119 | 4_2:-62527686 | Msa0613700:CDS |
| GCAGCCCAAGCCAAAGGCCA+GGG | 0.500330 | 4_2:-62527802 | Msa0613700:CDS |
| ATTGAGAAAGATAAAGATAT+GGG | 0.501674 | 4_2:-62527256 | Msa0613700:CDS |
| AGTGTTAACATCATGGCCCT+TGG | 0.504161 | 4_2:+62528133 | None:intergenic |
| GTTGGGGAGGGTATTCGAAC+TGG | 0.505315 | 4_2:+62527852 | None:intergenic |
| GAACTGGTGACTGAGCTAAT+GGG | 0.506349 | 4_2:+62527868 | None:intergenic |
| GTTGGATCGTCGATTGATTG+AGG | 0.506931 | 4_2:+62528667 | None:intergenic |
| TTTATAGGAATTGCCTGATA+GGG | 0.508579 | 4_2:-62527395 | Msa0613700:intron |
| TTTCCCTCTCTGGTTCAACA+TGG | 0.510397 | 4_2:+62528006 | None:intergenic |
| ATGTTGAACCAGAGAGGGAA+AGG | 0.513945 | 4_2:-62528004 | Msa0613700:CDS |
| AACCAGAGAGGGAAAGGGAG+AGG | 0.515203 | 4_2:-62527998 | Msa0613700:CDS |
| CTTCTTCCCCTCAGAAGGAG+GGG | 0.516580 | 4_2:+62527357 | None:intergenic |
| GGTGAGCAAGATTAAGCGGC+AGG | 0.516928 | 4_2:-62527562 | Msa0613700:CDS |
| TTCTTCAATTCCCTCACCGC+AGG | 0.519424 | 4_2:+62528428 | None:intergenic |
| AATGGGCATTTGGAGCAAGA+TGG | 0.522107 | 4_2:-62527669 | Msa0613700:CDS |
| ATTGAGGAAGCGTCATCTGA+TGG | 0.524535 | 4_2:+62528683 | None:intergenic |
| TGGCTGCAACACAGAGGCGG+TGG | 0.525481 | 4_2:-62528773 | Msa0613700:CDS |
| GTGCCTTCAAACAAAGGCAA+TGG | 0.528594 | 4_2:-62527519 | Msa0613700:CDS |
| CACTGGAAGTGCTCGCGTTG+GGG | 0.529411 | 4_2:+62527836 | None:intergenic |
| CCACCGTTGTGGTTTAGCCT+GGG | 0.530502 | 4_2:+62528506 | None:intergenic |
| TCTCTGGGAACTTGATCGAT+TGG | 0.533778 | 4_2:-62527604 | Msa0613700:CDS |
| GGAATCACTACCAGAACTGC+TGG | 0.534213 | 4_2:+62527195 | None:intergenic |
| GGAGCCACTGGAACTACTAC+TGG | 0.536891 | 4_2:+62527216 | None:intergenic |
| TTGAGGAAGCGTCATCTGAT+GGG | 0.538515 | 4_2:+62528684 | None:intergenic |
| ATTAAGCATCCTATGGATCT+GGG | 0.539150 | 4_2:-62528254 | Msa0613700:CDS |
| GGAAGTGCTCGCGTTGGGGA+GGG | 0.542081 | 4_2:+62527840 | None:intergenic |
| TTAGAAGTACTAGCAGGCTC+AGG | 0.542104 | 4_2:+62527912 | None:intergenic |
| GTATTGTGAATGATTATCGT+TGG | 0.542418 | 4_2:+62528649 | None:intergenic |
| TCTTTCTCAATCTCCACAGG+TGG | 0.544866 | 4_2:+62527268 | None:intergenic |
| TCAGGAAGTGACTCTGAAGC+GGG | 0.549573 | 4_2:-62527058 | Msa0613700:CDS |
| TGATGCAACCCCTCCTTCTG+AGG | 0.549763 | 4_2:-62527365 | Msa0613700:CDS |
| GAAATCAAAGTCAGAGATTG+GGG | 0.550032 | 4_2:-62528408 | Msa0613700:CDS |
| ACCTGTTCCATCTTCTCTGG+TGG | 0.552351 | 4_2:+62527714 | None:intergenic |
| AATAATGTGCCTTCAAACAA+AGG | 0.557916 | 4_2:-62527525 | Msa0613700:CDS |
| AGTGACTCTGAAGCGGGCAA+TGG | 0.561285 | 4_2:-62527052 | Msa0613700:CDS |
| GGCTGGTTAGAAGTACTAGC+AGG | 0.564980 | 4_2:+62527906 | None:intergenic |
| AACTGGTGACTGAGCTAATG+GGG | 0.565501 | 4_2:+62527869 | None:intergenic |
| GATGCAACCCCTCCTTCTGA+GGG | 0.565783 | 4_2:-62527364 | Msa0613700:CDS |
| TGTTGAACCAGAGAGGGAAA+GGG | 0.566133 | 4_2:-62528003 | Msa0613700:CDS |
| GGCGGTGGAGCTGAATTCAT+GGG | 0.566531 | 4_2:-62528758 | Msa0613700:CDS |
| CTTGAAGCAGCCCAAGCCAA+AGG | 0.568683 | 4_2:-62527808 | Msa0613700:CDS |
| ACCAGAGAGGGAAAGGGAGA+GGG | 0.569026 | 4_2:-62527997 | Msa0613700:CDS |
| TCCAATTCCAATCCCTCCAC+CGG | 0.570278 | 4_2:-62527958 | Msa0613700:CDS |
| TTCAGGAAGTGACTCTGAAG+CGG | 0.578365 | 4_2:-62527059 | Msa0613700:CDS |
| TCGCCGCAGTGTTAACATCA+TGG | 0.579958 | 4_2:+62528126 | None:intergenic |
| ATGAATTACAGGCTAGCTCG+TGG | 0.582142 | 4_2:-62528031 | Msa0613700:CDS |
| GGTAGTGATTCCTCATCTAG+TGG | 0.582431 | 4_2:-62527184 | Msa0613700:intron |
| CATCGAATCGTACACAAAGA+CGG | 0.584140 | 4_2:-62528615 | Msa0613700:CDS |
| AGCAAACAATTTCCCACCTG+TGG | 0.584400 | 4_2:-62527281 | Msa0613700:CDS |
| TAGTGGGACCACCACCGTTG+TGG | 0.584586 | 4_2:+62528495 | None:intergenic |
| TGCATTGACATACAATCCCA+AGG | 0.588241 | 4_2:-62528150 | Msa0613700:CDS |
| AGGCTAAACCACAACGGTGG+TGG | 0.594359 | 4_2:-62528503 | Msa0613700:CDS |
| TTGACAGTACCCAGATCCAT+AGG | 0.596367 | 4_2:+62528245 | None:intergenic |
| GATATGGGTGCTACTGGTGG+CGG | 0.601785 | 4_2:-62527241 | Msa0613700:CDS |
| TAACACTCCTGTAAATGCAA+CGG | 0.607221 | 4_2:-62528306 | Msa0613700:CDS |
| CTTTCTCAATCTCCACAGGT+GGG | 0.607678 | 4_2:+62527269 | None:intergenic |
| GGCCAGGGATCCAAATAAGA+GGG | 0.609397 | 4_2:-62527787 | Msa0613700:CDS |
| GAACCATGTTGAACCAGAGA+GGG | 0.610145 | 4_2:-62528009 | Msa0613700:CDS |
| AGAGGTTATACCACTAGATG+AGG | 0.610555 | 4_2:+62527174 | None:intergenic |
| GTGGTCCCACTAAGAAATCA+GGG | 0.612863 | 4_2:-62528484 | Msa0613700:CDS |
| GGAATTGCCTGATAGGGAGA+AGG | 0.614564 | 4_2:-62527389 | Msa0613700:CDS |
| TAAGAGGGAAATGAATGTTG+AGG | 0.616464 | 4_2:-62527772 | Msa0613700:CDS |
| ACATCAGCAGCAAAATCCGC+CGG | 0.619449 | 4_2:+62528191 | None:intergenic |
| TGTTGACACAGAGACTCTCT+GGG | 0.622924 | 4_2:-62527619 | Msa0613700:CDS |
| TGAGGAAGCGTCATCTGATG+GGG | 0.626247 | 4_2:+62528685 | None:intergenic |
| AGATGGTGAGCAAGATTAAG+CGG | 0.630774 | 4_2:-62527566 | Msa0613700:CDS |
| TAAGAAATCAGGGAGCAAGA+AGG | 0.642181 | 4_2:-62528474 | Msa0613700:CDS |
| AAAGATATGGGTGCTACTGG+TGG | 0.649739 | 4_2:-62527244 | Msa0613700:CDS |
| TGGGCATTTGGAGCAAGATG+GGG | 0.655326 | 4_2:-62527667 | Msa0613700:CDS |
| TGAGATTGAGCTTGATATGG+AGG | 0.664012 | 4_2:-62527643 | Msa0613700:CDS |
| GCATCGGCGTTATTAGCCAA+CGG | 0.665865 | 4_2:-62528809 | Msa0613700:CDS |
| GGAACCATGTTGAACCAGAG+AGG | 0.667661 | 4_2:-62528010 | Msa0613700:CDS |
| GGGGATGCGATGAAGGCTTG+TGG | 0.668675 | 4_2:-62528389 | Msa0613700:CDS |
| GAAGATAGATACTGTTGACG+AGG | 0.670346 | 4_2:-62527329 | Msa0613700:CDS |
| GGTGCCAGTAGTAGTTCCAG+TGG | 0.670411 | 4_2:-62527220 | Msa0613700:CDS |
| TAAGAATGCTTACTCTACGC+CGG | 0.674848 | 4_2:-62528210 | Msa0613700:CDS |
| GCATTGACATACAATCCCAA+GGG | 0.679665 | 4_2:-62528149 | Msa0613700:CDS |
| AATTGGCTGCAACACAGAGG+CGG | 0.689298 | 4_2:-62528776 | Msa0613700:CDS |
| ATGCAACCCCTCCTTCTGAG+GGG | 0.696569 | 4_2:-62527363 | Msa0613700:CDS |
| AATCAGGTGAGTTTAAACCC+AGG | 0.697049 | 4_2:-62528523 | Msa0613700:CDS |
| GCCTTCAAACAAAGGCAATG+GGG | 0.698333 | 4_2:-62527517 | Msa0613700:intron |
| ACTGGTGACTGAGCTAATGG+GGG | 0.699815 | 4_2:+62527870 | None:intergenic |
| GAATGCTTACTCTACGCCGG+CGG | 0.711544 | 4_2:-62528207 | Msa0613700:CDS |
| CCCAGGCTAAACCACAACGG+TGG | 0.730798 | 4_2:-62528506 | Msa0613700:CDS |
| CCAAATTGGCTGCAACACAG+AGG | 0.734243 | 4_2:-62528779 | Msa0613700:CDS |
| GTTGACGAGGATGTTGACAT+CGG | 0.736538 | 4_2:-62527316 | Msa0613700:CDS |
| AAACCCAGGCTAAACCACAA+CGG | 0.749218 | 4_2:-62528509 | Msa0613700:CDS |
| GGGCCATGATGTTAACACTG+CGG | 0.770423 | 4_2:-62528129 | Msa0613700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTTTTGTTACTAAATTTA+GGG | + | chr4_2:62527140-62527159 | None:intergenic | 15.0% |
| !!! | TCTTTTTGTTACTAAATTTA+GGG | + | chr4_2:62527140-62527159 | None:intergenic | 15.0% |
| !!! | CTCTTTTTGTTACTAAATTT+AGG | + | chr4_2:62527141-62527160 | None:intergenic | 20.0% |
| !! | ATTGAGAAAGATAAAGATAT+GGG | - | chr4_2:62528598-62528617 | Msa0613700:CDS | 20.0% |
| !!! | CTCTTTTTGTTACTAAATTT+AGG | + | chr4_2:62527141-62527160 | None:intergenic | 20.0% |
| !! | ATTGAGAAAGATAAAGATAT+GGG | - | chr4_2:62528598-62528617 | Msa0613700:CDS | 20.0% |
| !! | TGTTACTAAATTTAGGGTTA+GGG | + | chr4_2:62527134-62527153 | None:intergenic | 25.0% |
| !! | TTGTTACTAAATTTAGGGTT+AGG | + | chr4_2:62527135-62527154 | None:intergenic | 25.0% |
| ! | TGATATAATTAAGCATCCTA+TGG | - | chr4_2:62527593-62527612 | Msa0613700:CDS | 25.0% |
| !!! | AAGTTTTGATGATGAATTAC+AGG | - | chr4_2:62527812-62527831 | Msa0613700:CDS | 25.0% |
| ! | CAGAATAAAAATGGACAATA+AGG | + | chr4_2:62528369-62528388 | None:intergenic | 25.0% |
| ! | ATCACTCAACAGAATAAAAA+TGG | + | chr4_2:62528378-62528397 | None:intergenic | 25.0% |
| !! | ATTTTCTTGTGTGCATTTAT+AGG | - | chr4_2:62528444-62528463 | Msa0613700:CDS | 25.0% |
| ! | GATTGAGAAAGATAAAGATA+TGG | - | chr4_2:62528597-62528616 | Msa0613700:CDS | 25.0% |
| !! | TTTGTAGTCTGAAATTATCA+TGG | - | chr4_2:62528723-62528742 | Msa0613700:CDS | 25.0% |
| !! | TTGTAGTCTGAAATTATCAT+GGG | - | chr4_2:62528724-62528743 | Msa0613700:CDS | 25.0% |
| !! | TGTTACTAAATTTAGGGTTA+GGG | + | chr4_2:62527134-62527153 | None:intergenic | 25.0% |
| !! | TTGTTACTAAATTTAGGGTT+AGG | + | chr4_2:62527135-62527154 | None:intergenic | 25.0% |
| ! | TGATATAATTAAGCATCCTA+TGG | - | chr4_2:62527593-62527612 | Msa0613700:CDS | 25.0% |
| !!! | AAGTTTTGATGATGAATTAC+AGG | - | chr4_2:62527812-62527831 | Msa0613700:CDS | 25.0% |
| ! | CAGAATAAAAATGGACAATA+AGG | + | chr4_2:62528369-62528388 | None:intergenic | 25.0% |
| ! | ATCACTCAACAGAATAAAAA+TGG | + | chr4_2:62528378-62528397 | None:intergenic | 25.0% |
| !! | ATTTTCTTGTGTGCATTTAT+AGG | - | chr4_2:62528444-62528463 | Msa0613700:CDS | 25.0% |
| ! | GATTGAGAAAGATAAAGATA+TGG | - | chr4_2:62528597-62528616 | Msa0613700:CDS | 25.0% |
| !! | TTTGTAGTCTGAAATTATCA+TGG | - | chr4_2:62528723-62528742 | Msa0613700:CDS | 25.0% |
| !! | TTGTAGTCTGAAATTATCAT+GGG | - | chr4_2:62528724-62528743 | Msa0613700:CDS | 25.0% |
| GTATTGTGAATGATTATCGT+TGG | + | chr4_2:62527208-62527227 | None:intergenic | 30.0% | |
| AAGAAATCAAAGTCAGAGAT+TGG | - | chr4_2:62527444-62527463 | Msa0613700:intron | 30.0% | |
| AGAAATCAAAGTCAGAGATT+GGG | - | chr4_2:62527445-62527464 | Msa0613700:intron | 30.0% | |
| AAGCTCATGAAAAACAAAAG+TGG | - | chr4_2:62527501-62527520 | Msa0613700:intron | 30.0% | |
| TCATGAAAAACAAAAGTGGT+TGG | - | chr4_2:62527505-62527524 | Msa0613700:intron | 30.0% | |
| TCATCAAATTTCTCGTGTAT+TGG | + | chr4_2:62527789-62527808 | None:intergenic | 30.0% | |
| ACATTCATTTCCCTCTTATT+TGG | + | chr4_2:62528080-62528099 | None:intergenic | 30.0% | |
| TGTTGAGGAAAAACATAAGT+TGG | - | chr4_2:62528097-62528116 | Msa0613700:CDS | 30.0% | |
| GTTGAGGAAAAACATAAGTT+GGG | - | chr4_2:62528098-62528117 | Msa0613700:CDS | 30.0% | |
| ! | AAAAACATAAGTTGGGACTA+GGG | - | chr4_2:62528105-62528124 | Msa0613700:CDS | 30.0% |
| AGATCATAAGGAAGAGAAAT+GGG | - | chr4_2:62528168-62528187 | Msa0613700:CDS | 30.0% | |
| AATAATGTGCCTTCAAACAA+AGG | - | chr4_2:62528329-62528348 | Msa0613700:CDS | 30.0% | |
| ATTTATAGGAATTGCCTGAT+AGG | - | chr4_2:62528458-62528477 | Msa0613700:CDS | 30.0% | |
| TTTATAGGAATTGCCTGATA+GGG | - | chr4_2:62528459-62528478 | Msa0613700:CDS | 30.0% | |
| ATAAAACATTCAGTGGAAAG+AGG | + | chr4_2:62528701-62528720 | None:intergenic | 30.0% | |
| ! | TCTTTCCACTGAATGTTTTA+TGG | - | chr4_2:62528700-62528719 | Msa0613700:CDS | 30.0% |
| ACAAACCATAAAACATTCAG+TGG | + | chr4_2:62528708-62528727 | None:intergenic | 30.0% | |
| ! | TTTCGATACTTTTGCAGATT+CGG | - | chr4_2:62528759-62528778 | Msa0613700:CDS | 30.0% |
| GTATTGTGAATGATTATCGT+TGG | + | chr4_2:62527208-62527227 | None:intergenic | 30.0% | |
| AAGAAATCAAAGTCAGAGAT+TGG | - | chr4_2:62527444-62527463 | Msa0613700:intron | 30.0% | |
| AGAAATCAAAGTCAGAGATT+GGG | - | chr4_2:62527445-62527464 | Msa0613700:intron | 30.0% | |
| AAGCTCATGAAAAACAAAAG+TGG | - | chr4_2:62527501-62527520 | Msa0613700:intron | 30.0% | |
| TCATGAAAAACAAAAGTGGT+TGG | - | chr4_2:62527505-62527524 | Msa0613700:intron | 30.0% | |
| TCATCAAATTTCTCGTGTAT+TGG | + | chr4_2:62527789-62527808 | None:intergenic | 30.0% | |
| ACATTCATTTCCCTCTTATT+TGG | + | chr4_2:62528080-62528099 | None:intergenic | 30.0% | |
| TGTTGAGGAAAAACATAAGT+TGG | - | chr4_2:62528097-62528116 | Msa0613700:CDS | 30.0% | |
| GTTGAGGAAAAACATAAGTT+GGG | - | chr4_2:62528098-62528117 | Msa0613700:CDS | 30.0% | |
| ! | AAAAACATAAGTTGGGACTA+GGG | - | chr4_2:62528105-62528124 | Msa0613700:CDS | 30.0% |
| AGATCATAAGGAAGAGAAAT+GGG | - | chr4_2:62528168-62528187 | Msa0613700:CDS | 30.0% | |
| AATAATGTGCCTTCAAACAA+AGG | - | chr4_2:62528329-62528348 | Msa0613700:CDS | 30.0% | |
| ATTTATAGGAATTGCCTGAT+AGG | - | chr4_2:62528458-62528477 | Msa0613700:CDS | 30.0% | |
| TTTATAGGAATTGCCTGATA+GGG | - | chr4_2:62528459-62528478 | Msa0613700:CDS | 30.0% | |
| ATAAAACATTCAGTGGAAAG+AGG | + | chr4_2:62528701-62528720 | None:intergenic | 30.0% | |
| ! | TCTTTCCACTGAATGTTTTA+TGG | - | chr4_2:62528700-62528719 | Msa0613700:CDS | 30.0% |
| ACAAACCATAAAACATTCAG+TGG | + | chr4_2:62528708-62528727 | None:intergenic | 30.0% | |
| ! | TTTCGATACTTTTGCAGATT+CGG | - | chr4_2:62528759-62528778 | Msa0613700:CDS | 30.0% |
| ! | CTAAATTTAGGGTTAGGGTT+AGG | + | chr4_2:62527129-62527148 | None:intergenic | 35.0% |
| CTTAAGACTCGAATTGAATC+AGG | - | chr4_2:62527315-62527334 | Msa0613700:CDS | 35.0% | |
| GAAATCAAAGTCAGAGATTG+GGG | - | chr4_2:62527446-62527465 | Msa0613700:intron | 35.0% | |
| ! | GTGGTTGGATTTTTAACACT+TGG | - | chr4_2:62527520-62527539 | Msa0613700:CDS | 35.0% |
| TAACACTCCTGTAAATGCAA+CGG | - | chr4_2:62527548-62527567 | Msa0613700:CDS | 35.0% | |
| AATTAAGCATCCTATGGATC+TGG | - | chr4_2:62527599-62527618 | Msa0613700:CDS | 35.0% | |
| ATTAAGCATCCTATGGATCT+GGG | - | chr4_2:62527600-62527619 | Msa0613700:CDS | 35.0% | |
| TAAGAGGGAAATGAATGTTG+AGG | - | chr4_2:62528082-62528101 | Msa0613700:CDS | 35.0% | |
| ! | GAAAAACATAAGTTGGGACT+AGG | - | chr4_2:62528104-62528123 | Msa0613700:CDS | 35.0% |
| CAGATCATAAGGAAGAGAAA+TGG | - | chr4_2:62528167-62528186 | Msa0613700:CDS | 35.0% | |
| ! | TTGATCGATTGGTTACCAAT+TGG | - | chr4_2:62528261-62528280 | Msa0613700:CDS | 35.0% |
| GGTTACCAATTGGAAAAAGA+TGG | - | chr4_2:62528271-62528290 | Msa0613700:CDS | 35.0% | |
| TTATCTTTCTCAATCTCCAC+AGG | + | chr4_2:62528592-62528611 | None:intergenic | 35.0% | |
| !! | CTGCAAAAGTATCGAAATTG+AGG | + | chr4_2:62528756-62528775 | None:intergenic | 35.0% |
| ! | CTAAATTTAGGGTTAGGGTT+AGG | + | chr4_2:62527129-62527148 | None:intergenic | 35.0% |
| CTTAAGACTCGAATTGAATC+AGG | - | chr4_2:62527315-62527334 | Msa0613700:CDS | 35.0% | |
| GAAATCAAAGTCAGAGATTG+GGG | - | chr4_2:62527446-62527465 | Msa0613700:intron | 35.0% | |
| ! | GTGGTTGGATTTTTAACACT+TGG | - | chr4_2:62527520-62527539 | Msa0613700:CDS | 35.0% |
| TAACACTCCTGTAAATGCAA+CGG | - | chr4_2:62527548-62527567 | Msa0613700:CDS | 35.0% | |
| AATTAAGCATCCTATGGATC+TGG | - | chr4_2:62527599-62527618 | Msa0613700:CDS | 35.0% | |
| ATTAAGCATCCTATGGATCT+GGG | - | chr4_2:62527600-62527619 | Msa0613700:CDS | 35.0% | |
| TAAGAGGGAAATGAATGTTG+AGG | - | chr4_2:62528082-62528101 | Msa0613700:CDS | 35.0% | |
| ! | GAAAAACATAAGTTGGGACT+AGG | - | chr4_2:62528104-62528123 | Msa0613700:CDS | 35.0% |
| CAGATCATAAGGAAGAGAAA+TGG | - | chr4_2:62528167-62528186 | Msa0613700:CDS | 35.0% | |
| ! | TTGATCGATTGGTTACCAAT+TGG | - | chr4_2:62528261-62528280 | Msa0613700:CDS | 35.0% |
| GGTTACCAATTGGAAAAAGA+TGG | - | chr4_2:62528271-62528290 | Msa0613700:CDS | 35.0% | |
| TTATCTTTCTCAATCTCCAC+AGG | + | chr4_2:62528592-62528611 | None:intergenic | 35.0% | |
| !! | CTGCAAAAGTATCGAAATTG+AGG | + | chr4_2:62528756-62528775 | None:intergenic | 35.0% |
| CATCGAATCGTACACAAAGA+CGG | - | chr4_2:62527239-62527258 | Msa0613700:CDS | 40.0% | |
| GAGTCTTAAGCTGACGAATT+TGG | + | chr4_2:62527305-62527324 | None:intergenic | 40.0% | |
| AATCAGGTGAGTTTAAACCC+AGG | - | chr4_2:62527331-62527350 | Msa0613700:CDS | 40.0% | |
| TTGCTCCCTGATTTCTTAGT+GGG | + | chr4_2:62527378-62527397 | None:intergenic | 40.0% | |
| TAAGAAATCAGGGAGCAAGA+AGG | - | chr4_2:62527380-62527399 | Msa0613700:CDS | 40.0% | |
| TTCAAAGCCGTTGCATTTAC+AGG | + | chr4_2:62527558-62527577 | None:intergenic | 40.0% | |
| TAAGAATGCTTACTCTACGC+CGG | - | chr4_2:62527644-62527663 | Msa0613700:CDS | 40.0% | |
| ! | TGCATTGACATACAATCCCA+AGG | - | chr4_2:62527704-62527723 | Msa0613700:CDS | 40.0% |
| ! | GCATTGACATACAATCCCAA+GGG | - | chr4_2:62527705-62527724 | Msa0613700:CDS | 40.0% |
| GCAGCTTCTTGAAAAATTCG+AGG | - | chr4_2:62527752-62527771 | Msa0613700:CDS | 40.0% | |
| AACAGGTAGTGCAGATCATA+AGG | - | chr4_2:62528156-62528175 | Msa0613700:CDS | 40.0% | |
| AAGGAAGAGAAATGGGCATT+TGG | - | chr4_2:62528175-62528194 | Msa0613700:CDS | 40.0% | |
| GGATGAGATTGAGCTTGATA+TGG | - | chr4_2:62528208-62528227 | Msa0613700:CDS | 40.0% | |
| TGAGATTGAGCTTGATATGG+AGG | - | chr4_2:62528211-62528230 | Msa0613700:CDS | 40.0% | |
| ! | GCTCACCATCTTTTTCCAAT+TGG | + | chr4_2:62528279-62528298 | None:intergenic | 40.0% |
| AGATGGTGAGCAAGATTAAG+CGG | - | chr4_2:62528288-62528307 | Msa0613700:CDS | 40.0% | |
| TGCCTTCAAACAAAGGCAAT+GGG | - | chr4_2:62528336-62528355 | Msa0613700:CDS | 40.0% | |
| GCTGTCTAATGTAGCATTGT+TGG | - | chr4_2:62528401-62528420 | Msa0613700:CDS | 40.0% | |
| GAAGATAGATACTGTTGACG+AGG | - | chr4_2:62528525-62528544 | Msa0613700:CDS | 40.0% | |
| ! | GATAAAGATATGGGTGCTAC+TGG | - | chr4_2:62528607-62528626 | Msa0613700:CDS | 40.0% |
| AGAGGTTATACCACTAGATG+AGG | + | chr4_2:62528683-62528702 | None:intergenic | 40.0% | |
| ! | ACTTTTGCAGATTCGGATTC+AGG | - | chr4_2:62528766-62528785 | Msa0613700:CDS | 40.0% |
| ! | CTTTTGCAGATTCGGATTCA+GGG | - | chr4_2:62528767-62528786 | Msa0613700:CDS | 40.0% |
| CATCGAATCGTACACAAAGA+CGG | - | chr4_2:62527239-62527258 | Msa0613700:CDS | 40.0% | |
| GAGTCTTAAGCTGACGAATT+TGG | + | chr4_2:62527305-62527324 | None:intergenic | 40.0% | |
| AATCAGGTGAGTTTAAACCC+AGG | - | chr4_2:62527331-62527350 | Msa0613700:CDS | 40.0% | |
| TTGCTCCCTGATTTCTTAGT+GGG | + | chr4_2:62527378-62527397 | None:intergenic | 40.0% | |
| TAAGAAATCAGGGAGCAAGA+AGG | - | chr4_2:62527380-62527399 | Msa0613700:CDS | 40.0% | |
| TTCAAAGCCGTTGCATTTAC+AGG | + | chr4_2:62527558-62527577 | None:intergenic | 40.0% | |
| TAAGAATGCTTACTCTACGC+CGG | - | chr4_2:62527644-62527663 | Msa0613700:CDS | 40.0% | |
| ! | TGCATTGACATACAATCCCA+AGG | - | chr4_2:62527704-62527723 | Msa0613700:CDS | 40.0% |
| ! | GCATTGACATACAATCCCAA+GGG | - | chr4_2:62527705-62527724 | Msa0613700:CDS | 40.0% |
| GCAGCTTCTTGAAAAATTCG+AGG | - | chr4_2:62527752-62527771 | Msa0613700:CDS | 40.0% | |
| AACAGGTAGTGCAGATCATA+AGG | - | chr4_2:62528156-62528175 | Msa0613700:CDS | 40.0% | |
| AAGGAAGAGAAATGGGCATT+TGG | - | chr4_2:62528175-62528194 | Msa0613700:CDS | 40.0% | |
| GGATGAGATTGAGCTTGATA+TGG | - | chr4_2:62528208-62528227 | Msa0613700:CDS | 40.0% | |
| TGAGATTGAGCTTGATATGG+AGG | - | chr4_2:62528211-62528230 | Msa0613700:CDS | 40.0% | |
| ! | GCTCACCATCTTTTTCCAAT+TGG | + | chr4_2:62528279-62528298 | None:intergenic | 40.0% |
| AGATGGTGAGCAAGATTAAG+CGG | - | chr4_2:62528288-62528307 | Msa0613700:CDS | 40.0% | |
| TGCCTTCAAACAAAGGCAAT+GGG | - | chr4_2:62528336-62528355 | Msa0613700:CDS | 40.0% | |
| GCTGTCTAATGTAGCATTGT+TGG | - | chr4_2:62528401-62528420 | Msa0613700:CDS | 40.0% | |
| GAAGATAGATACTGTTGACG+AGG | - | chr4_2:62528525-62528544 | Msa0613700:CDS | 40.0% | |
| ! | GATAAAGATATGGGTGCTAC+TGG | - | chr4_2:62528607-62528626 | Msa0613700:CDS | 40.0% |
| AGAGGTTATACCACTAGATG+AGG | + | chr4_2:62528683-62528702 | None:intergenic | 40.0% | |
| ! | ACTTTTGCAGATTCGGATTC+AGG | - | chr4_2:62528766-62528785 | Msa0613700:CDS | 40.0% |
| ! | CTTTTGCAGATTCGGATTCA+GGG | - | chr4_2:62528767-62528786 | Msa0613700:CDS | 40.0% |
| ! | CCAATTTGGTTCGTTACCGT+TGG | + | chr4_2:62527064-62527083 | None:intergenic | 45.0% |
| CCAACGGTAACGAACCAAAT+TGG | - | chr4_2:62527061-62527080 | Msa0613700:CDS | 45.0% | |
| !! | TTGAGGAAGCGTCATCTGAT+GGG | + | chr4_2:62527173-62527192 | None:intergenic | 45.0% |
| !! | ATTGAGGAAGCGTCATCTGA+TGG | + | chr4_2:62527174-62527193 | None:intergenic | 45.0% |
| ! | GTTGGATCGTCGATTGATTG+AGG | + | chr4_2:62527190-62527209 | None:intergenic | 45.0% |
| AAACCCAGGCTAAACCACAA+CGG | - | chr4_2:62527345-62527364 | Msa0613700:CDS | 45.0% | |
| GTGGTCCCACTAAGAAATCA+GGG | - | chr4_2:62527370-62527389 | Msa0613700:CDS | 45.0% | |
| CTTGCTCCCTGATTTCTTAG+TGG | + | chr4_2:62527379-62527398 | None:intergenic | 45.0% | |
| ! | AGGAAAAGGTCGTTTGTTGC+CGG | + | chr4_2:62527409-62527428 | None:intergenic | 45.0% |
| ! | CAACAAACGACCTTTTCCTG+CGG | - | chr4_2:62527410-62527429 | Msa0613700:intron | 45.0% |
| TTGACAGTACCCAGATCCAT+AGG | + | chr4_2:62527612-62527631 | None:intergenic | 45.0% | |
| GTGTTAACATCATGGCCCTT+GGG | + | chr4_2:62527723-62527742 | None:intergenic | 45.0% | |
| AGTGTTAACATCATGGCCCT+TGG | + | chr4_2:62527724-62527743 | None:intergenic | 45.0% | |
| ! | ATGAATTACAGGCTAGCTCG+TGG | - | chr4_2:62527823-62527842 | Msa0613700:CDS | 45.0% |
| GAACCATGTTGAACCAGAGA+GGG | - | chr4_2:62527845-62527864 | Msa0613700:CDS | 45.0% | |
| ! | TTTCCCTCTCTGGTTCAACA+TGG | + | chr4_2:62527851-62527870 | None:intergenic | 45.0% |
| ATGTTGAACCAGAGAGGGAA+AGG | - | chr4_2:62527850-62527869 | Msa0613700:CDS | 45.0% | |
| TGTTGAACCAGAGAGGGAAA+GGG | - | chr4_2:62527851-62527870 | Msa0613700:CDS | 45.0% | |
| !! | TTAGAAGTACTAGCAGGCTC+AGG | + | chr4_2:62527945-62527964 | None:intergenic | 45.0% |
| AACTGGTGACTGAGCTAATG+GGG | + | chr4_2:62527988-62528007 | None:intergenic | 45.0% | |
| GAACTGGTGACTGAGCTAAT+GGG | + | chr4_2:62527989-62528008 | None:intergenic | 45.0% | |
| ! | TTATTTGGATCCCTGGCCTT+TGG | + | chr4_2:62528065-62528084 | None:intergenic | 45.0% |
| ! | TTCCCTCTTATTTGGATCCC+TGG | + | chr4_2:62528072-62528091 | None:intergenic | 45.0% |
| ! | GATTTTGCCACCAGAGAAGA+TGG | - | chr4_2:62528133-62528152 | Msa0613700:CDS | 45.0% |
| ACTACCTGTTCCATCTTCTC+TGG | + | chr4_2:62528146-62528165 | None:intergenic | 45.0% | |
| ! | AATGGGCATTTGGAGCAAGA+TGG | - | chr4_2:62528185-62528204 | Msa0613700:CDS | 45.0% |
| ! | ATGGGCATTTGGAGCAAGAT+GGG | - | chr4_2:62528186-62528205 | Msa0613700:CDS | 45.0% |
| TGTTGACACAGAGACTCTCT+GGG | - | chr4_2:62528235-62528254 | Msa0613700:CDS | 45.0% | |
| ! | TCTCTGGGAACTTGATCGAT+TGG | - | chr4_2:62528250-62528269 | Msa0613700:CDS | 45.0% |
| GTGCCTTCAAACAAAGGCAA+TGG | - | chr4_2:62528335-62528354 | Msa0613700:CDS | 45.0% | |
| GCCTTCAAACAAAGGCAATG+GGG | - | chr4_2:62528337-62528356 | Msa0613700:CDS | 45.0% | |
| ! | ACCCCATTGCCTTTGTTTGA+AGG | + | chr4_2:62528341-62528360 | None:intergenic | 45.0% |
| GTTGACGAGGATGTTGACAT+CGG | - | chr4_2:62528538-62528557 | Msa0613700:CDS | 45.0% | |
| ACAGGTGGGAAATTGTTTGC+TGG | + | chr4_2:62528574-62528593 | None:intergenic | 45.0% | |
| AGCAAACAATTTCCCACCTG+TGG | - | chr4_2:62528573-62528592 | Msa0613700:CDS | 45.0% | |
| CTTTCTCAATCTCCACAGGT+GGG | + | chr4_2:62528588-62528607 | None:intergenic | 45.0% | |
| TCTTTCTCAATCTCCACAGG+TGG | + | chr4_2:62528589-62528608 | None:intergenic | 45.0% | |
| !! | AAAGATATGGGTGCTACTGG+TGG | - | chr4_2:62528610-62528629 | Msa0613700:CDS | 45.0% |
| GGTAGTGATTCCTCATCTAG+TGG | - | chr4_2:62528670-62528689 | Msa0613700:CDS | 45.0% | |
| ! | TTCAGGAAGTGACTCTGAAG+CGG | - | chr4_2:62528795-62528814 | Msa0613700:CDS | 45.0% |
| ! | CCAATTTGGTTCGTTACCGT+TGG | + | chr4_2:62527064-62527083 | None:intergenic | 45.0% |
| CCAACGGTAACGAACCAAAT+TGG | - | chr4_2:62527061-62527080 | Msa0613700:CDS | 45.0% | |
| !! | TTGAGGAAGCGTCATCTGAT+GGG | + | chr4_2:62527173-62527192 | None:intergenic | 45.0% |
| !! | ATTGAGGAAGCGTCATCTGA+TGG | + | chr4_2:62527174-62527193 | None:intergenic | 45.0% |
| ! | GTTGGATCGTCGATTGATTG+AGG | + | chr4_2:62527190-62527209 | None:intergenic | 45.0% |
| AAACCCAGGCTAAACCACAA+CGG | - | chr4_2:62527345-62527364 | Msa0613700:CDS | 45.0% | |
| GTGGTCCCACTAAGAAATCA+GGG | - | chr4_2:62527370-62527389 | Msa0613700:CDS | 45.0% | |
| CTTGCTCCCTGATTTCTTAG+TGG | + | chr4_2:62527379-62527398 | None:intergenic | 45.0% | |
| ! | AGGAAAAGGTCGTTTGTTGC+CGG | + | chr4_2:62527409-62527428 | None:intergenic | 45.0% |
| ! | CAACAAACGACCTTTTCCTG+CGG | - | chr4_2:62527410-62527429 | Msa0613700:intron | 45.0% |
| TTGACAGTACCCAGATCCAT+AGG | + | chr4_2:62527612-62527631 | None:intergenic | 45.0% | |
| GTGTTAACATCATGGCCCTT+GGG | + | chr4_2:62527723-62527742 | None:intergenic | 45.0% | |
| AGTGTTAACATCATGGCCCT+TGG | + | chr4_2:62527724-62527743 | None:intergenic | 45.0% | |
| ! | ATGAATTACAGGCTAGCTCG+TGG | - | chr4_2:62527823-62527842 | Msa0613700:CDS | 45.0% |
| GAACCATGTTGAACCAGAGA+GGG | - | chr4_2:62527845-62527864 | Msa0613700:CDS | 45.0% | |
| ! | TTTCCCTCTCTGGTTCAACA+TGG | + | chr4_2:62527851-62527870 | None:intergenic | 45.0% |
| ATGTTGAACCAGAGAGGGAA+AGG | - | chr4_2:62527850-62527869 | Msa0613700:CDS | 45.0% | |
| TGTTGAACCAGAGAGGGAAA+GGG | - | chr4_2:62527851-62527870 | Msa0613700:CDS | 45.0% | |
| !! | TTAGAAGTACTAGCAGGCTC+AGG | + | chr4_2:62527945-62527964 | None:intergenic | 45.0% |
| AACTGGTGACTGAGCTAATG+GGG | + | chr4_2:62527988-62528007 | None:intergenic | 45.0% | |
| GAACTGGTGACTGAGCTAAT+GGG | + | chr4_2:62527989-62528008 | None:intergenic | 45.0% | |
| ! | TTATTTGGATCCCTGGCCTT+TGG | + | chr4_2:62528065-62528084 | None:intergenic | 45.0% |
| ! | TTCCCTCTTATTTGGATCCC+TGG | + | chr4_2:62528072-62528091 | None:intergenic | 45.0% |
| ! | GATTTTGCCACCAGAGAAGA+TGG | - | chr4_2:62528133-62528152 | Msa0613700:CDS | 45.0% |
| ACTACCTGTTCCATCTTCTC+TGG | + | chr4_2:62528146-62528165 | None:intergenic | 45.0% | |
| ! | AATGGGCATTTGGAGCAAGA+TGG | - | chr4_2:62528185-62528204 | Msa0613700:CDS | 45.0% |
| ! | ATGGGCATTTGGAGCAAGAT+GGG | - | chr4_2:62528186-62528205 | Msa0613700:CDS | 45.0% |
| TGTTGACACAGAGACTCTCT+GGG | - | chr4_2:62528235-62528254 | Msa0613700:CDS | 45.0% | |
| ! | TCTCTGGGAACTTGATCGAT+TGG | - | chr4_2:62528250-62528269 | Msa0613700:CDS | 45.0% |
| GTGCCTTCAAACAAAGGCAA+TGG | - | chr4_2:62528335-62528354 | Msa0613700:CDS | 45.0% | |
| GCCTTCAAACAAAGGCAATG+GGG | - | chr4_2:62528337-62528356 | Msa0613700:CDS | 45.0% | |
| ! | ACCCCATTGCCTTTGTTTGA+AGG | + | chr4_2:62528341-62528360 | None:intergenic | 45.0% |
| GTTGACGAGGATGTTGACAT+CGG | - | chr4_2:62528538-62528557 | Msa0613700:CDS | 45.0% | |
| ACAGGTGGGAAATTGTTTGC+TGG | + | chr4_2:62528574-62528593 | None:intergenic | 45.0% | |
| AGCAAACAATTTCCCACCTG+TGG | - | chr4_2:62528573-62528592 | Msa0613700:CDS | 45.0% | |
| CTTTCTCAATCTCCACAGGT+GGG | + | chr4_2:62528588-62528607 | None:intergenic | 45.0% | |
| TCTTTCTCAATCTCCACAGG+TGG | + | chr4_2:62528589-62528608 | None:intergenic | 45.0% | |
| !! | AAAGATATGGGTGCTACTGG+TGG | - | chr4_2:62528610-62528629 | Msa0613700:CDS | 45.0% |
| GGTAGTGATTCCTCATCTAG+TGG | - | chr4_2:62528670-62528689 | Msa0613700:CDS | 45.0% | |
| ! | TTCAGGAAGTGACTCTGAAG+CGG | - | chr4_2:62528795-62528814 | Msa0613700:CDS | 45.0% |
| ! | GCATCGGCGTTATTAGCCAA+CGG | - | chr4_2:62527045-62527064 | Msa0613700:CDS | 50.0% |
| CCTCTGTGTTGCAGCCAATT+TGG | + | chr4_2:62527078-62527097 | None:intergenic | 50.0% | |
| CCAAATTGGCTGCAACACAG+AGG | - | chr4_2:62527075-62527094 | Msa0613700:CDS | 50.0% | |
| AATTGGCTGCAACACAGAGG+CGG | - | chr4_2:62527078-62527097 | Msa0613700:CDS | 50.0% | |
| !! | TGAGGAAGCGTCATCTGATG+GGG | + | chr4_2:62527172-62527191 | None:intergenic | 50.0% |
| GGTGGTCCCACTAAGAAATC+AGG | - | chr4_2:62527369-62527388 | Msa0613700:CDS | 50.0% | |
| TCAGGGAGCAAGAAGGTTTC+CGG | - | chr4_2:62527387-62527406 | Msa0613700:CDS | 50.0% | |
| AATTCCCTCACCGCAGGAAA+AGG | + | chr4_2:62527423-62527442 | None:intergenic | 50.0% | |
| TTCTTCAATTCCCTCACCGC+AGG | + | chr4_2:62527429-62527448 | None:intergenic | 50.0% | |
| AGAGATTGGGGATGCGATGA+AGG | - | chr4_2:62527458-62527477 | Msa0613700:intron | 50.0% | |
| ACATCAGCAGCAAAATCCGC+CGG | + | chr4_2:62527666-62527685 | None:intergenic | 50.0% | |
| GGGCCATGATGTTAACACTG+CGG | - | chr4_2:62527725-62527744 | Msa0613700:CDS | 50.0% | |
| TCGCCGCAGTGTTAACATCA+TGG | + | chr4_2:62527731-62527750 | None:intergenic | 50.0% | |
| GGAACCATGTTGAACCAGAG+AGG | - | chr4_2:62527844-62527863 | Msa0613700:CDS | 50.0% | |
| TCCAATTCCAATCCCTCCAC+CGG | - | chr4_2:62527896-62527915 | Msa0613700:CDS | 50.0% | |
| !! | GGCTGGTTAGAAGTACTAGC+AGG | + | chr4_2:62527951-62527970 | None:intergenic | 50.0% |
| ! | AATGGGGGATTCGAAGTGCT+TGG | + | chr4_2:62527972-62527991 | None:intergenic | 50.0% |
| ACTGGTGACTGAGCTAATGG+GGG | + | chr4_2:62527987-62528006 | None:intergenic | 50.0% | |
| CGAACTGGTGACTGAGCTAA+TGG | + | chr4_2:62527990-62528009 | None:intergenic | 50.0% | |
| !! | TTTGGCTTGGGCTGCTTCAA+GGG | + | chr4_2:62528047-62528066 | None:intergenic | 50.0% |
| AGGCCAGGGATCCAAATAAG+AGG | - | chr4_2:62528066-62528085 | Msa0613700:CDS | 50.0% | |
| GGCCAGGGATCCAAATAAGA+GGG | - | chr4_2:62528067-62528086 | Msa0613700:CDS | 50.0% | |
| ACCTGTTCCATCTTCTCTGG+TGG | + | chr4_2:62528143-62528162 | None:intergenic | 50.0% | |
| ! | TGGGCATTTGGAGCAAGATG+GGG | - | chr4_2:62528187-62528206 | Msa0613700:CDS | 50.0% |
| CTGTTGACACAGAGACTCTC+TGG | - | chr4_2:62528234-62528253 | Msa0613700:CDS | 50.0% | |
| GGAATTGCCTGATAGGGAGA+AGG | - | chr4_2:62528465-62528484 | Msa0613700:CDS | 50.0% | |
| GCATCAACCTTCTCCCTATC+AGG | + | chr4_2:62528475-62528494 | None:intergenic | 50.0% | |
| TTCTGCTTCTTCCCCTCAGA+AGG | + | chr4_2:62528505-62528524 | None:intergenic | 50.0% | |
| GGAATCACTACCAGAACTGC+TGG | + | chr4_2:62528662-62528681 | None:intergenic | 50.0% | |
| TCGGATTCAGGGAGTTCTTC+AGG | - | chr4_2:62528778-62528797 | Msa0613700:CDS | 50.0% | |
| !! | TCAGGAAGTGACTCTGAAGC+GGG | - | chr4_2:62528796-62528815 | Msa0613700:CDS | 50.0% |
| ! | GCATCGGCGTTATTAGCCAA+CGG | - | chr4_2:62527045-62527064 | Msa0613700:CDS | 50.0% |
| CCTCTGTGTTGCAGCCAATT+TGG | + | chr4_2:62527078-62527097 | None:intergenic | 50.0% | |
| CCAAATTGGCTGCAACACAG+AGG | - | chr4_2:62527075-62527094 | Msa0613700:CDS | 50.0% | |
| AATTGGCTGCAACACAGAGG+CGG | - | chr4_2:62527078-62527097 | Msa0613700:CDS | 50.0% | |
| !! | TGAGGAAGCGTCATCTGATG+GGG | + | chr4_2:62527172-62527191 | None:intergenic | 50.0% |
| GGTGGTCCCACTAAGAAATC+AGG | - | chr4_2:62527369-62527388 | Msa0613700:CDS | 50.0% | |
| TCAGGGAGCAAGAAGGTTTC+CGG | - | chr4_2:62527387-62527406 | Msa0613700:CDS | 50.0% | |
| AATTCCCTCACCGCAGGAAA+AGG | + | chr4_2:62527423-62527442 | None:intergenic | 50.0% | |
| TTCTTCAATTCCCTCACCGC+AGG | + | chr4_2:62527429-62527448 | None:intergenic | 50.0% | |
| AGAGATTGGGGATGCGATGA+AGG | - | chr4_2:62527458-62527477 | Msa0613700:intron | 50.0% | |
| ACATCAGCAGCAAAATCCGC+CGG | + | chr4_2:62527666-62527685 | None:intergenic | 50.0% | |
| GGGCCATGATGTTAACACTG+CGG | - | chr4_2:62527725-62527744 | Msa0613700:CDS | 50.0% | |
| TCGCCGCAGTGTTAACATCA+TGG | + | chr4_2:62527731-62527750 | None:intergenic | 50.0% | |
| GGAACCATGTTGAACCAGAG+AGG | - | chr4_2:62527844-62527863 | Msa0613700:CDS | 50.0% | |
| TCCAATTCCAATCCCTCCAC+CGG | - | chr4_2:62527896-62527915 | Msa0613700:CDS | 50.0% | |
| !! | GGCTGGTTAGAAGTACTAGC+AGG | + | chr4_2:62527951-62527970 | None:intergenic | 50.0% |
| ! | AATGGGGGATTCGAAGTGCT+TGG | + | chr4_2:62527972-62527991 | None:intergenic | 50.0% |
| ACTGGTGACTGAGCTAATGG+GGG | + | chr4_2:62527987-62528006 | None:intergenic | 50.0% | |
| CGAACTGGTGACTGAGCTAA+TGG | + | chr4_2:62527990-62528009 | None:intergenic | 50.0% | |
| !! | TTTGGCTTGGGCTGCTTCAA+GGG | + | chr4_2:62528047-62528066 | None:intergenic | 50.0% |
| AGGCCAGGGATCCAAATAAG+AGG | - | chr4_2:62528066-62528085 | Msa0613700:CDS | 50.0% | |
| GGCCAGGGATCCAAATAAGA+GGG | - | chr4_2:62528067-62528086 | Msa0613700:CDS | 50.0% | |
| ACCTGTTCCATCTTCTCTGG+TGG | + | chr4_2:62528143-62528162 | None:intergenic | 50.0% | |
| ! | TGGGCATTTGGAGCAAGATG+GGG | - | chr4_2:62528187-62528206 | Msa0613700:CDS | 50.0% |
| CTGTTGACACAGAGACTCTC+TGG | - | chr4_2:62528234-62528253 | Msa0613700:CDS | 50.0% | |
| GGAATTGCCTGATAGGGAGA+AGG | - | chr4_2:62528465-62528484 | Msa0613700:CDS | 50.0% | |
| GCATCAACCTTCTCCCTATC+AGG | + | chr4_2:62528475-62528494 | None:intergenic | 50.0% | |
| TTCTGCTTCTTCCCCTCAGA+AGG | + | chr4_2:62528505-62528524 | None:intergenic | 50.0% | |
| GGAATCACTACCAGAACTGC+TGG | + | chr4_2:62528662-62528681 | None:intergenic | 50.0% | |
| TCGGATTCAGGGAGTTCTTC+AGG | - | chr4_2:62528778-62528797 | Msa0613700:CDS | 50.0% | |
| !! | TCAGGAAGTGACTCTGAAGC+GGG | - | chr4_2:62528796-62528815 | Msa0613700:CDS | 50.0% |
| AGGCGGTGGAGCTGAATTCA+TGG | - | chr4_2:62527095-62527114 | Msa0613700:intron | 55.0% | |
| GGCGGTGGAGCTGAATTCAT+GGG | - | chr4_2:62527096-62527115 | Msa0613700:intron | 55.0% | |
| CCACCGTTGTGGTTTAGCCT+GGG | + | chr4_2:62527351-62527370 | None:intergenic | 55.0% | |
| ACCACCGTTGTGGTTTAGCC+TGG | + | chr4_2:62527352-62527371 | None:intergenic | 55.0% | |
| AGGCTAAACCACAACGGTGG+TGG | - | chr4_2:62527351-62527370 | Msa0613700:CDS | 55.0% | |
| ! | AACGACCTTTTCCTGCGGTG+AGG | - | chr4_2:62527415-62527434 | Msa0613700:intron | 55.0% |
| ! | ACGACCTTTTCCTGCGGTGA+GGG | - | chr4_2:62527416-62527435 | Msa0613700:intron | 55.0% |
| GAATGCTTACTCTACGCCGG+CGG | - | chr4_2:62527647-62527666 | Msa0613700:CDS | 55.0% | |
| AACCAGAGAGGGAAAGGGAG+AGG | - | chr4_2:62527856-62527875 | Msa0613700:CDS | 55.0% | |
| ACCAGAGAGGGAAAGGGAGA+GGG | - | chr4_2:62527857-62527876 | Msa0613700:CDS | 55.0% | |
| ACCGGTGGAGGGATTGGAAT+TGG | + | chr4_2:62527900-62527919 | None:intergenic | 55.0% | |
| TTTGCTACCGGTGGAGGGAT+TGG | + | chr4_2:62527906-62527925 | None:intergenic | 55.0% | |
| ! | TCTTGGCGTTTTGCTACCGG+TGG | + | chr4_2:62527915-62527934 | None:intergenic | 55.0% |
| ! | GGCTCTTGGCGTTTTGCTAC+CGG | + | chr4_2:62527918-62527937 | None:intergenic | 55.0% |
| !! | GTTGGGGAGGGTATTCGAAC+TGG | + | chr4_2:62528005-62528024 | None:intergenic | 55.0% |
| !! | TCACTGGAAGTGCTCGCGTT+GGG | + | chr4_2:62528022-62528041 | None:intergenic | 55.0% |
| !! | TTCACTGGAAGTGCTCGCGT+TGG | + | chr4_2:62528023-62528042 | None:intergenic | 55.0% |
| !! | CTTTGGCTTGGGCTGCTTCA+AGG | + | chr4_2:62528048-62528067 | None:intergenic | 55.0% |
| CTTGAAGCAGCCCAAGCCAA+AGG | - | chr4_2:62528046-62528065 | Msa0613700:CDS | 55.0% | |
| GCCACCAGAGAAGATGGAAC+AGG | - | chr4_2:62528139-62528158 | Msa0613700:CDS | 55.0% | |
| GGTGAGCAAGATTAAGCGGC+AGG | - | chr4_2:62528292-62528311 | Msa0613700:CDS | 55.0% | |
| GATTAAGCGGCAGGCGCTAA+TGG | - | chr4_2:62528301-62528320 | Msa0613700:CDS | 55.0% | |
| TGATGCAACCCCTCCTTCTG+AGG | - | chr4_2:62528489-62528508 | Msa0613700:CDS | 55.0% | |
| GATGCAACCCCTCCTTCTGA+GGG | - | chr4_2:62528490-62528509 | Msa0613700:CDS | 55.0% | |
| ATGCAACCCCTCCTTCTGAG+GGG | - | chr4_2:62528491-62528510 | Msa0613700:CDS | 55.0% | |
| CTTCTTCCCCTCAGAAGGAG+GGG | + | chr4_2:62528500-62528519 | None:intergenic | 55.0% | |
| GCTTCTTCCCCTCAGAAGGA+GGG | + | chr4_2:62528501-62528520 | None:intergenic | 55.0% | |
| TGCTTCTTCCCCTCAGAAGG+AGG | + | chr4_2:62528502-62528521 | None:intergenic | 55.0% | |
| !! | GATATGGGTGCTACTGGTGG+CGG | - | chr4_2:62528613-62528632 | Msa0613700:CDS | 55.0% |
| GGTGCCAGTAGTAGTTCCAG+TGG | - | chr4_2:62528634-62528653 | Msa0613700:CDS | 55.0% | |
| GGAGCCACTGGAACTACTAC+TGG | + | chr4_2:62528641-62528660 | None:intergenic | 55.0% | |
| !! | AGTGACTCTGAAGCGGGCAA+TGG | - | chr4_2:62528802-62528821 | Msa0613700:CDS | 55.0% |
| AGGCGGTGGAGCTGAATTCA+TGG | - | chr4_2:62527095-62527114 | Msa0613700:intron | 55.0% | |
| GGCGGTGGAGCTGAATTCAT+GGG | - | chr4_2:62527096-62527115 | Msa0613700:intron | 55.0% | |
| CCACCGTTGTGGTTTAGCCT+GGG | + | chr4_2:62527351-62527370 | None:intergenic | 55.0% | |
| ACCACCGTTGTGGTTTAGCC+TGG | + | chr4_2:62527352-62527371 | None:intergenic | 55.0% | |
| AGGCTAAACCACAACGGTGG+TGG | - | chr4_2:62527351-62527370 | Msa0613700:CDS | 55.0% | |
| ! | AACGACCTTTTCCTGCGGTG+AGG | - | chr4_2:62527415-62527434 | Msa0613700:intron | 55.0% |
| ! | ACGACCTTTTCCTGCGGTGA+GGG | - | chr4_2:62527416-62527435 | Msa0613700:intron | 55.0% |
| GAATGCTTACTCTACGCCGG+CGG | - | chr4_2:62527647-62527666 | Msa0613700:CDS | 55.0% | |
| AACCAGAGAGGGAAAGGGAG+AGG | - | chr4_2:62527856-62527875 | Msa0613700:CDS | 55.0% | |
| ACCAGAGAGGGAAAGGGAGA+GGG | - | chr4_2:62527857-62527876 | Msa0613700:CDS | 55.0% | |
| ACCGGTGGAGGGATTGGAAT+TGG | + | chr4_2:62527900-62527919 | None:intergenic | 55.0% | |
| TTTGCTACCGGTGGAGGGAT+TGG | + | chr4_2:62527906-62527925 | None:intergenic | 55.0% | |
| ! | TCTTGGCGTTTTGCTACCGG+TGG | + | chr4_2:62527915-62527934 | None:intergenic | 55.0% |
| ! | GGCTCTTGGCGTTTTGCTAC+CGG | + | chr4_2:62527918-62527937 | None:intergenic | 55.0% |
| !! | GTTGGGGAGGGTATTCGAAC+TGG | + | chr4_2:62528005-62528024 | None:intergenic | 55.0% |
| !! | TCACTGGAAGTGCTCGCGTT+GGG | + | chr4_2:62528022-62528041 | None:intergenic | 55.0% |
| !! | TTCACTGGAAGTGCTCGCGT+TGG | + | chr4_2:62528023-62528042 | None:intergenic | 55.0% |
| !! | CTTTGGCTTGGGCTGCTTCA+AGG | + | chr4_2:62528048-62528067 | None:intergenic | 55.0% |
| CTTGAAGCAGCCCAAGCCAA+AGG | - | chr4_2:62528046-62528065 | Msa0613700:CDS | 55.0% | |
| GCCACCAGAGAAGATGGAAC+AGG | - | chr4_2:62528139-62528158 | Msa0613700:CDS | 55.0% | |
| GGTGAGCAAGATTAAGCGGC+AGG | - | chr4_2:62528292-62528311 | Msa0613700:CDS | 55.0% | |
| GATTAAGCGGCAGGCGCTAA+TGG | - | chr4_2:62528301-62528320 | Msa0613700:CDS | 55.0% | |
| TGATGCAACCCCTCCTTCTG+AGG | - | chr4_2:62528489-62528508 | Msa0613700:CDS | 55.0% | |
| GATGCAACCCCTCCTTCTGA+GGG | - | chr4_2:62528490-62528509 | Msa0613700:CDS | 55.0% | |
| ATGCAACCCCTCCTTCTGAG+GGG | - | chr4_2:62528491-62528510 | Msa0613700:CDS | 55.0% | |
| CTTCTTCCCCTCAGAAGGAG+GGG | + | chr4_2:62528500-62528519 | None:intergenic | 55.0% | |
| GCTTCTTCCCCTCAGAAGGA+GGG | + | chr4_2:62528501-62528520 | None:intergenic | 55.0% | |
| TGCTTCTTCCCCTCAGAAGG+AGG | + | chr4_2:62528502-62528521 | None:intergenic | 55.0% | |
| !! | GATATGGGTGCTACTGGTGG+CGG | - | chr4_2:62528613-62528632 | Msa0613700:CDS | 55.0% |
| GGTGCCAGTAGTAGTTCCAG+TGG | - | chr4_2:62528634-62528653 | Msa0613700:CDS | 55.0% | |
| GGAGCCACTGGAACTACTAC+TGG | + | chr4_2:62528641-62528660 | None:intergenic | 55.0% | |
| !! | AGTGACTCTGAAGCGGGCAA+TGG | - | chr4_2:62528802-62528821 | Msa0613700:CDS | 55.0% |
| CCCAGGCTAAACCACAACGG+TGG | - | chr4_2:62527348-62527367 | Msa0613700:CDS | 60.0% | |
| TAGTGGGACCACCACCGTTG+TGG | + | chr4_2:62527362-62527381 | None:intergenic | 60.0% | |
| GGGGATGCGATGAAGGCTTG+TGG | - | chr4_2:62527465-62527484 | Msa0613700:intron | 60.0% | |
| ACCCTCTCCCTTTCCCTCTC+TGG | + | chr4_2:62527861-62527880 | None:intergenic | 60.0% | |
| ! | GGCGTTTTGCTACCGGTGGA+GGG | + | chr4_2:62527911-62527930 | None:intergenic | 60.0% |
| ! | TGGCGTTTTGCTACCGGTGG+AGG | + | chr4_2:62527912-62527931 | None:intergenic | 60.0% |
| GTACTAGCAGGCTCAGGCAG+TGG | + | chr4_2:62527939-62527958 | None:intergenic | 60.0% | |
| ! | GGGGATTCGAAGTGCTTGGC+TGG | + | chr4_2:62527968-62527987 | None:intergenic | 60.0% |
| !! | CACTGGAAGTGCTCGCGTTG+GGG | + | chr4_2:62528021-62528040 | None:intergenic | 60.0% |
| GGCTGCTTCAAGGGCTTCAC+TGG | + | chr4_2:62528038-62528057 | None:intergenic | 60.0% | |
| ! | GGATCCCTGGCCTTTGGCTT+GGG | + | chr4_2:62528059-62528078 | None:intergenic | 60.0% |
| ! | TGGATCCCTGGCCTTTGGCT+TGG | + | chr4_2:62528060-62528079 | None:intergenic | 60.0% |
| TCCAGTGGCTCCAGCAGTTC+TGG | - | chr4_2:62528649-62528668 | Msa0613700:CDS | 60.0% | |
| ACCAGAACTGCTGGAGCCAC+TGG | + | chr4_2:62528653-62528672 | None:intergenic | 60.0% | |
| CCCAGGCTAAACCACAACGG+TGG | - | chr4_2:62527348-62527367 | Msa0613700:CDS | 60.0% | |
| TAGTGGGACCACCACCGTTG+TGG | + | chr4_2:62527362-62527381 | None:intergenic | 60.0% | |
| GGGGATGCGATGAAGGCTTG+TGG | - | chr4_2:62527465-62527484 | Msa0613700:intron | 60.0% | |
| ACCCTCTCCCTTTCCCTCTC+TGG | + | chr4_2:62527861-62527880 | None:intergenic | 60.0% | |
| ! | GGCGTTTTGCTACCGGTGGA+GGG | + | chr4_2:62527911-62527930 | None:intergenic | 60.0% |
| ! | TGGCGTTTTGCTACCGGTGG+AGG | + | chr4_2:62527912-62527931 | None:intergenic | 60.0% |
| GTACTAGCAGGCTCAGGCAG+TGG | + | chr4_2:62527939-62527958 | None:intergenic | 60.0% | |
| ! | GGGGATTCGAAGTGCTTGGC+TGG | + | chr4_2:62527968-62527987 | None:intergenic | 60.0% |
| !! | CACTGGAAGTGCTCGCGTTG+GGG | + | chr4_2:62528021-62528040 | None:intergenic | 60.0% |
| GGCTGCTTCAAGGGCTTCAC+TGG | + | chr4_2:62528038-62528057 | None:intergenic | 60.0% | |
| ! | GGATCCCTGGCCTTTGGCTT+GGG | + | chr4_2:62528059-62528078 | None:intergenic | 60.0% |
| ! | TGGATCCCTGGCCTTTGGCT+TGG | + | chr4_2:62528060-62528079 | None:intergenic | 60.0% |
| TCCAGTGGCTCCAGCAGTTC+TGG | - | chr4_2:62528649-62528668 | Msa0613700:CDS | 60.0% | |
| ACCAGAACTGCTGGAGCCAC+TGG | + | chr4_2:62528653-62528672 | None:intergenic | 60.0% | |
| TGGCTGCAACACAGAGGCGG+TGG | - | chr4_2:62527081-62527100 | Msa0613700:CDS | 65.0% | |
| CAGGCTCAGGCAGTGGCTCT+TGG | + | chr4_2:62527932-62527951 | None:intergenic | 65.0% | |
| !! | GGAAGTGCTCGCGTTGGGGA+GGG | + | chr4_2:62528017-62528036 | None:intergenic | 65.0% |
| !! | TGGAAGTGCTCGCGTTGGGG+AGG | + | chr4_2:62528018-62528037 | None:intergenic | 65.0% |
| AGCAGCCCAAGCCAAAGGCC+AGG | - | chr4_2:62528051-62528070 | Msa0613700:CDS | 65.0% | |
| GCAGCCCAAGCCAAAGGCCA+GGG | - | chr4_2:62528052-62528071 | Msa0613700:CDS | 65.0% | |
| TGGCTGCAACACAGAGGCGG+TGG | - | chr4_2:62527081-62527100 | Msa0613700:CDS | 65.0% | |
| CAGGCTCAGGCAGTGGCTCT+TGG | + | chr4_2:62527932-62527951 | None:intergenic | 65.0% | |
| !! | GGAAGTGCTCGCGTTGGGGA+GGG | + | chr4_2:62528017-62528036 | None:intergenic | 65.0% |
| !! | TGGAAGTGCTCGCGTTGGGG+AGG | + | chr4_2:62528018-62528037 | None:intergenic | 65.0% |
| AGCAGCCCAAGCCAAAGGCC+AGG | - | chr4_2:62528051-62528070 | Msa0613700:CDS | 65.0% | |
| GCAGCCCAAGCCAAAGGCCA+GGG | - | chr4_2:62528052-62528071 | Msa0613700:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 62527042 | 62528834 | 62527042 | ID=Msa0613700;Name=Msa0613700 |
| chr4_2 | mRNA | 62527042 | 62528834 | 62527042 | ID=Msa0613700-mRNA-1;Parent=Msa0613700;Name=Msa0613700-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|3|0|533 |
| chr4_2 | exon | 62527518 | 62528834 | 62527518 | ID=Msa0613700-mRNA-1:exon:17246;Parent=Msa0613700-mRNA-1 |
| chr4_2 | exon | 62527185 | 62527410 | 62527185 | ID=Msa0613700-mRNA-1:exon:17245;Parent=Msa0613700-mRNA-1 |
| chr4_2 | exon | 62527042 | 62527100 | 62527042 | ID=Msa0613700-mRNA-1:exon:17244;Parent=Msa0613700-mRNA-1 |
| chr4_2 | CDS | 62527518 | 62528834 | 62527518 | ID=Msa0613700-mRNA-1:cds;Parent=Msa0613700-mRNA-1 |
| chr4_2 | CDS | 62527185 | 62527410 | 62527185 | ID=Msa0613700-mRNA-1:cds;Parent=Msa0613700-mRNA-1 |
| chr4_2 | CDS | 62527042 | 62527100 | 62527042 | ID=Msa0613700-mRNA-1:cds;Parent=Msa0613700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
