AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0559500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0559500 MtrunA17_Chr4g0049491 95.122 533 26 0 1 533 1 533 0.0 971
Msa0559500 MtrunA17_Chr4g0049471 82.189 539 47 6 1 533 1 496 0.0 808
Msa0559500 MtrunA17_Chr2g0325391 45.965 285 126 6 141 425 293 549 3.87e-67 229
Msa0559500 MtrunA17_Chr2g0325411 43.537 294 120 8 141 425 304 560 2.21e-63 218
Msa0559500 MtrunA17_Chr4g0040981 44.444 288 116 8 145 425 656 906 2.33e-63 223
Msa0559500 MtrunA17_Chr3g0116311 28.660 485 223 16 51 487 79 488 8.92e-42 160
Msa0559500 MtrunA17_Chr7g0230041 30.836 347 168 10 145 487 183 461 2.22e-34 138
Msa0559500 MtrunA17_Chr6g0462121 26.683 401 227 12 74 460 2 349 6.06e-28 114
Msa0559500 MtrunA17_Chr2g0285151 41.143 175 90 5 95 266 29 193 5.31e-27 114
Msa0559500 MtrunA17_Chr7g0230031 52.381 84 35 1 145 228 198 276 1.26e-21 99.0
Msa0559500 MtrunA17_Chr8g0369041 38.028 142 78 6 109 245 56 192 5.41e-21 94.7
Msa0559500 MtrunA17_Chr2g0296681 43.210 81 43 2 167 244 97 177 2.95e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0559500 AT1G73150.2 38.035 397 209 10 37 429 23 386 1.98e-61 208
Msa0559500 AT1G73150.1 38.035 397 209 10 37 429 23 386 2.34e-61 209
Msa0559500 AT1G17790.1 38.083 386 184 11 55 420 49 399 2.27e-58 202
Msa0559500 AT1G06230.2 41.912 272 135 6 144 414 421 670 2.54e-53 193
Msa0559500 AT1G06230.4 41.912 272 135 6 144 414 421 670 2.54e-53 193
Msa0559500 AT1G06230.1 41.912 272 135 6 144 414 421 670 2.54e-53 193
Msa0559500 AT1G06230.3 41.912 272 135 6 144 414 421 670 2.54e-53 193
Msa0559500 AT5G65630.1 60.265 151 52 1 337 487 390 532 1.65e-48 177
Msa0559500 AT5G10550.1 56.000 150 59 2 337 486 385 527 8.54e-43 161
Msa0559500 AT5G14270.2 30.769 442 217 14 77 503 64 431 7.19e-40 154
Msa0559500 AT5G14270.3 30.769 442 217 14 77 503 64 431 7.21e-40 154
Msa0559500 AT5G14270.1 30.769 442 217 14 77 503 64 431 7.21e-40 154
Msa0559500 AT5G63320.3 28.634 454 222 15 64 487 60 441 2.21e-39 150
Msa0559500 AT5G63320.2 28.634 454 222 15 64 487 60 441 2.21e-39 150
Msa0559500 AT5G63320.1 29.241 448 227 15 64 487 60 441 1.51e-37 148
Msa0559500 AT3G01770.2 32.386 352 162 12 145 492 130 409 1.22e-32 131
Msa0559500 AT3G27260.4 32.219 329 149 11 145 469 177 435 1.31e-32 133
Msa0559500 AT3G27260.1 32.024 331 147 12 145 469 177 435 1.79e-32 132
Msa0559500 AT3G27260.3 32.024 331 147 12 145 469 177 435 1.98e-32 132
Msa0559500 AT3G27260.2 32.219 329 149 11 145 469 128 386 2.60e-32 132
Msa0559500 AT3G01770.1 32.386 352 162 12 145 492 130 409 7.87e-32 130
Msa0559500 AT5G46550.1 41.481 135 66 2 148 282 73 194 1.55e-24 107
Msa0559500 AT3G52280.1 27.007 274 149 6 143 411 93 320 7.27e-24 103
Msa0559500 AT3G52280.2 24.289 387 212 11 42 411 15 337 7.35e-24 103
Msa0559500 AT2G34900.1 27.914 326 178 9 143 460 109 385 1.00e-23 103
Msa0559500 AT2G34900.2 28.713 303 164 7 166 460 17 275 2.49e-23 100
Msa0559500 AT1G58025.6 35.135 111 62 3 134 243 209 310 5.76e-11 65.5
Msa0559500 AT1G58025.1 35.135 111 62 3 134 243 209 310 5.76e-11 65.5
Msa0559500 AT1G58025.4 35.135 111 62 3 134 243 209 310 6.13e-11 65.5
Msa0559500 AT1G58025.5 35.135 111 62 3 134 243 209 310 6.13e-11 65.5
Msa0559500 AT1G58025.3 35.135 111 62 3 134 243 209 310 6.13e-11 65.5
Msa0559500 AT1G58025.2 35.135 111 62 3 134 243 209 310 6.37e-11 65.5

Find 373 sgRNAs with CRISPR-Local

Find 707 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTCATTTCCCTCTTATT+TGG 0.124253 4_1:-58683405 None:intergenic
TCTAGAGGCTCTCGGGTTTC+AGG 0.140533 4_1:-58690385 None:intergenic
AATAATAGTATCTTCTTTAA+AGG 0.144302 4_1:+58684799 Msa0559500:three_prime_UTR
AGCAAAACTTGAACAGATTT+TGG 0.146646 4_1:-58685554 None:intergenic
TGTCGGCAATTAATGGATTT+TGG 0.149295 4_1:-58685075 None:intergenic
CTTTGGCTTGGGCTGCTTCA+AGG 0.184318 4_1:-58683373 None:intergenic
AAATCACTCTCCTCAAATTT+TGG 0.184493 4_1:+58684649 Msa0559500:three_prime_UTR
CTTCATGCAGATTCGGATTC+AGG 0.197155 4_1:+58684091 Msa0559500:intron
GATTGAATTGCAGGGTAATT+TGG 0.204017 4_1:+58687651 Msa0559500:three_prime_UTR
AAACCTCACTGATATCATTT+TGG 0.206558 4_1:+58685416 Msa0559500:three_prime_UTR
CGCTAACCGGAGTTGGTCTT+TGG 0.209629 4_1:-58684189 None:intergenic
TTTGAGAAGGTCTTCTATTT+TGG 0.212238 4_1:+58690423 Msa0559500:three_prime_UTR
TTCTCCATGTTGTATGTATC+AGG 0.217713 4_1:+58684734 Msa0559500:three_prime_UTR
GGATGACCTTATTCAAATTA+AGG 0.221553 4_1:+58684759 Msa0559500:three_prime_UTR
AGGTTCATTCTGTGAGATTT+TGG 0.222633 4_1:+58685365 Msa0559500:three_prime_UTR
TTCAAAGCCGTTGCATTTAC+AGG 0.229221 4_1:-58682883 None:intergenic
CCTTACACGGGGACCAAGTT+TGG 0.247711 4_1:-58687490 None:intergenic
TTACTGTTGAATTCTGATTA+TGG 0.256105 4_1:+58684917 Msa0559500:three_prime_UTR
CCTCTGTGTTGCAGCCAATT+TGG 0.258953 4_1:-58682403 None:intergenic
GCAAATGTAGCTCAATTAAT+AGG 0.260029 4_1:+58690295 Msa0559500:three_prime_UTR
TTAGATTACTTTCCATATTT+AGG 0.260725 4_1:-58685726 None:intergenic
TTTAAATAGGTATGCGATTT+CGG 0.262568 4_1:-58690733 None:intergenic
AATTTCCTGTCGGCAATTAA+TGG 0.273571 4_1:-58685082 None:intergenic
TTGTAGCAGGGCAGGGCTTT+TGG 0.276745 4_1:+58684154 Msa0559500:exon
GCATCTTCATGGGAACAATT+TGG 0.278027 4_1:+58690265 Msa0559500:three_prime_UTR
TCCAGTGGTTCCAGCAGCTC+TGG 0.278947 4_1:+58683976 Msa0559500:CDS
TATTTCAGGGTGGGCTTTGA+TGG 0.281036 4_1:+58687444 Msa0559500:intron
CACTTCCCTTAATTTGAATA+AGG 0.281195 4_1:-58684765 None:intergenic
GATTAACATGATGTTGGTTT+TGG 0.284033 4_1:+58691332 Msa0559500:three_prime_UTR
TGGGTGGTTGATTGAATTGC+AGG 0.284576 4_1:+58687642 Msa0559500:three_prime_UTR
ACCCTCTCCCTTTCCCTCTC+TGG 0.292850 4_1:-58683186 None:intergenic
TTGTTACTAAATTTAGGGTT+AGG 0.292960 4_1:-58682460 None:intergenic
CGAACACAGCAACCAGCTTT+AGG 0.295367 4_1:-58685313 None:intergenic
TCAGCTTGGGAATGGCTAAT+TGG 0.305268 4_1:+58684405 Msa0559500:three_prime_UTR
TCAGGGAGCAAGAAGGTTTC+CGG 0.305508 4_1:+58682715 Msa0559500:CDS
TGGATCGTAGAAGATGTATT+TGG 0.307982 4_1:+58685039 Msa0559500:three_prime_UTR
CAATGGCTTCTTCATCAAAA+AGG 0.309130 4_1:+58691038 Msa0559500:three_prime_UTR
TATTTAGGTCCTAATCCTTC+TGG 0.311577 4_1:-58685711 None:intergenic
TGTGACTTTGGAGTGTATAA+AGG 0.320419 4_1:+58684463 Msa0559500:three_prime_UTR
GAGTCTTAAGCTGACGAATT+TGG 0.320746 4_1:-58682630 None:intergenic
GGATCCCTGGCCTTTGGCTT+GGG 0.322222 4_1:-58683384 None:intergenic
TTCCCTCTTATTTGGATCCC+TGG 0.326630 4_1:-58683397 None:intergenic
TGGATCCCTGGCCTTTGGCT+TGG 0.328127 4_1:-58683385 None:intergenic
ATAGATGCTTAAGAAGGTTT+AGG 0.331775 4_1:+58684561 Msa0559500:three_prime_UTR
TTTGGCTTGGGCTGCTTCAA+GGG 0.331789 4_1:-58683372 None:intergenic
GCATCAACCTTCTCCCTATC+AGG 0.335506 4_1:-58683799 None:intergenic
TCACTTGAAGTGCTCGCGTT+GGG 0.336663 4_1:-58683347 None:intergenic
TCGGATTCAGGGAGTTCTTC+AGG 0.341320 4_1:+58684103 Msa0559500:CDS
TTATTTGGATCCCTGGCCTT+TGG 0.344705 4_1:-58683390 None:intergenic
ACCCCATTGCCTTTGTTTGA+AGG 0.345351 4_1:-58683666 None:intergenic
CGGCGTAGAGTAAGCATTCT+TGG 0.350895 4_1:-58682971 None:intergenic
ACCACCGTTGTGGTTTAGCC+TGG 0.356873 4_1:-58682677 None:intergenic
GCTAACCGGAGTTGGTCTTT+GGG 0.357309 4_1:-58684188 None:intergenic
GAAGGATTAGGACCTAAATA+TGG 0.361824 4_1:+58685714 Msa0559500:three_prime_UTR
GTAAGATTTATTGATTCTTT+CGG 0.363238 4_1:-58684871 None:intergenic
TTTGGAGTGTATAAAGGGTT+TGG 0.366249 4_1:+58684469 Msa0559500:three_prime_UTR
CTGTTGACACGGAGACTCTC+TGG 0.367522 4_1:+58683562 Msa0559500:CDS
CCAACGGTAACGAACCAAAT+TGG 0.367917 4_1:+58682389 Msa0559500:CDS
TAATGGAGCTACTGTATTGC+AGG 0.368010 4_1:+58685765 Msa0559500:three_prime_UTR
TCTTCTGCTTGGATTGAACT+TGG 0.369254 4_1:+58690921 Msa0559500:three_prime_UTR
CGAACTGGTGACTGAGCTAA+TGG 0.371584 4_1:-58683315 None:intergenic
ATGGCACTGGCCTTGGCAAC+GGG 0.371852 4_1:+58690986 Msa0559500:three_prime_UTR
AAAGAGGAAAAGAGAGTGTA+AGG 0.371897 4_1:-58682172 None:intergenic
ACTGGTGGAGGGATTGGAAT+TGG 0.375860 4_1:-58683225 None:intergenic
CTAGTTGTTCTAGAGGCTCT+CGG 0.379192 4_1:-58690393 None:intergenic
TTGACTGTTGGTTTCAGCTT+GGG 0.379374 4_1:+58684392 Msa0559500:three_prime_UTR
GATTAAGCGGCAGGCGCTAA+TGG 0.380098 4_1:+58683629 Msa0559500:CDS
AAGAAATCAAAGTCAGAGAT+TGG 0.382024 4_1:+58682772 Msa0559500:CDS
AATTAAGCATCCTATGGATC+TGG 0.384774 4_1:+58682927 Msa0559500:CDS
CAGGCTCAGGCAGTGGCTCT+TGG 0.385121 4_1:-58683257 None:intergenic
AGAGTGTAAGGGTTTGGAAT+TGG 0.386382 4_1:-58682160 None:intergenic
TCATCAAATTTCTCGTGTAT+TGG 0.386676 4_1:-58683114 None:intergenic
TTCTGTTTCTTTCCCTCAGA+AGG 0.387137 4_1:-58683829 None:intergenic
AATTCTTTCTCCAAAATTTG+AGG 0.394494 4_1:-58684659 None:intergenic
CTTGCTCCCTGATTTCTTAG+TGG 0.395685 4_1:-58682704 None:intergenic
GAATCTACACACACAAGAAA+TGG 0.396244 4_1:-58687772 None:intergenic
TTGCTCCCTGATTTCTTAGT+GGG 0.400065 4_1:-58682703 None:intergenic
CATGATTTGCGTTGTGACTT+TGG 0.400286 4_1:+58684451 Msa0559500:three_prime_UTR
GATTGAGCAAGATAAAGATA+TGG 0.403309 4_1:+58683924 Msa0559500:CDS
GAAAAGAGAGTGTAAGGGTT+TGG 0.406320 4_1:-58682166 None:intergenic
GGTGGTCCCACTAAGAAATC+AGG 0.406385 4_1:+58682697 Msa0559500:CDS
AATACAGTATTGTATACTAA+TGG 0.410307 4_1:+58685748 Msa0559500:three_prime_UTR
TTAGATGCAGTAAAGTTGAT+TGG 0.414089 4_1:+58690319 Msa0559500:three_prime_UTR
GATATAGAATGGCATCTTCA+TGG 0.416346 4_1:+58690254 Msa0559500:three_prime_UTR
CTTAAGACTCGAATTGAATC+AGG 0.417831 4_1:+58682643 Msa0559500:CDS
TCCAGGACTGTTCCCAAACT+TGG 0.417969 4_1:+58687477 Msa0559500:three_prime_UTR
TGGTTGATCAGGTTTCAAAA+AGG 0.418460 4_1:-58685534 None:intergenic
TGGAATCCCTACGCGCCGTT+TGG 0.419052 4_1:-58682236 None:intergenic
CTTACACGGGGACCAAGTTT+GGG 0.420704 4_1:-58687489 None:intergenic
ATCTTCATGAACACTGCATT+CGG 0.421778 4_1:-58691312 None:intergenic
TGCCTTCAAACAAAGGCAAT+GGG 0.422340 4_1:+58683664 Msa0559500:CDS
CTTATTCAAATTAAGGGAAG+TGG 0.423453 4_1:+58684766 Msa0559500:three_prime_UTR
TTTGCTACTGGTGGAGGGAT+TGG 0.424910 4_1:-58683231 None:intergenic
CTTCTGCTTGGATTGAACTT+GGG 0.424994 4_1:+58690922 Msa0559500:three_prime_UTR
GTGACTTTGGAGTGTATAAA+GGG 0.425235 4_1:+58684464 Msa0559500:three_prime_UTR
AGGAAAAGGTCGTTTGTTGC+CGG 0.425299 4_1:-58682734 None:intergenic
ACTACTTGTTCCATCTTCTC+TGG 0.427581 4_1:-58683471 None:intergenic
GATGACCTTATTCAAATTAA+GGG 0.428182 4_1:+58684760 Msa0559500:three_prime_UTR
TTGGGAATGGCTAATTGGAT+TGG 0.428398 4_1:+58684410 Msa0559500:three_prime_UTR
AAGGAAGAGAAATGGGCATT+TGG 0.428825 4_1:+58683503 Msa0559500:CDS
CTAAATTTAGGGTTAGGGTT+AGG 0.433996 4_1:-58682454 None:intergenic
CTAGAGGCTCTCGGGTTTCA+GGG 0.434211 4_1:-58690384 None:intergenic
AGAAATCAAAGTCAGAGATT+GGG 0.434900 4_1:+58682773 Msa0559500:CDS
TGGTTGCTGTGTTCGTTGTT+TGG 0.436224 4_1:+58685321 Msa0559500:three_prime_UTR
GGATGAGATTGAGCTTGATA+TGG 0.436408 4_1:+58683536 Msa0559500:CDS
ATGCATAATGGCACTGGCCT+TGG 0.437873 4_1:+58690979 Msa0559500:three_prime_UTR
CTATCTTTATTTGCTCGCCA+TGG 0.439513 4_1:+58690468 Msa0559500:three_prime_UTR
TGGGAATGGCTAATTGGATT+GGG 0.439943 4_1:+58684411 Msa0559500:three_prime_UTR
TTCACTTGAAGTGCTCGCGT+TGG 0.441063 4_1:-58683348 None:intergenic
TGAAGAGCCTGTAGAATGTC+AGG 0.442841 4_1:-58687323 None:intergenic
ATTTACAGGAATTGCCTGAT+AGG 0.443388 4_1:+58683785 Msa0559500:intron
TTCAGAATTCATATTAATCA+AGG 0.444590 4_1:-58688020 None:intergenic
CCCAGAGCTGCTGGAACCAC+TGG 0.444706 4_1:-58683977 None:intergenic
TCGATCGATTGGTTACCAAT+TGG 0.445939 4_1:+58683589 Msa0559500:CDS
GAGTTTCGACAAACAATCAA+TGG 0.446006 4_1:-58685468 None:intergenic
TGTTACTAAATTTAGGGTTA+GGG 0.446081 4_1:-58682459 None:intergenic
ACATTTCTTGATCCGCTAAC+CGG 0.446710 4_1:-58684202 None:intergenic
CCAAACTTGGTCCCCGTGTA+AGG 0.448709 4_1:+58687490 Msa0559500:three_prime_UTR
CGAAACTCTGATGTGGTTCA+TGG 0.449538 4_1:+58685483 Msa0559500:three_prime_UTR
AGGATAGACCACGGACAATT+CGG 0.449739 4_1:+58691374 Msa0559500:three_prime_UTR
AGGCGGTGGAGCTGAATTCA+TGG 0.450284 4_1:+58682423 Msa0559500:CDS
TACTTACTGTAAATGTGTAC+AGG 0.450918 4_1:-58684623 None:intergenic
AACAAACCTGCTATTTATCA+AGG 0.452854 4_1:-58685133 None:intergenic
CTGAGAAAATTGATGCATAA+TGG 0.453484 4_1:+58690967 Msa0559500:three_prime_UTR
ACAGGTGGGAAATCGTTTGC+TGG 0.455112 4_1:-58683898 None:intergenic
AATTGCAGGGTAATTTGGAA+TGG 0.457236 4_1:+58687656 Msa0559500:three_prime_UTR
ATGGTCATTTGTAGCAGGGC+AGG 0.459288 4_1:+58684146 Msa0559500:exon
TGATGTAATTAAGCATCCTA+TGG 0.459357 4_1:+58682921 Msa0559500:CDS
ATCTTCTACGATCCATGAAA+AGG 0.461857 4_1:-58685031 None:intergenic
GTGGTAAAAGTTTCTCTAGT+AGG 0.462118 4_1:+58684538 Msa0559500:three_prime_UTR
AGATCATAAGGAAGAGAAAT+GGG 0.462775 4_1:+58683496 Msa0559500:CDS
ACCAAGTTTGGGAACAGTCC+TGG 0.463033 4_1:-58687478 None:intergenic
CATTGTTTATCAATTTATGA+AGG 0.463321 4_1:+58690498 Msa0559500:three_prime_UTR
AACAAGTAGTACAGATCATA+AGG 0.463491 4_1:+58683484 Msa0559500:CDS
ATGGGCATTTGGAGCAAGAT+GGG 0.463782 4_1:+58683514 Msa0559500:CDS
TAGAGGTTCCATCTTCTGCT+TGG 0.464250 4_1:+58690910 Msa0559500:three_prime_UTR
TGTTTCTAAGTAATATATAG+AGG 0.465593 4_1:+58690893 Msa0559500:three_prime_UTR
TCAGGAAGTGATTCTGAAGC+TGG 0.466135 4_1:+58684121 Msa0559500:CDS
TTCCACCTGCGCGTGATCGT+TGG 0.467491 4_1:+58682254 Msa0559500:five_prime_UTR
TAGATGCAGTAAAGTTGATT+GGG 0.468118 4_1:+58690320 Msa0559500:three_prime_UTR
AATTCCCTCACCGCAGGAAA+AGG 0.468461 4_1:-58682748 None:intergenic
ATTGAGCAAGATAAAGATAT+GGG 0.469983 4_1:+58683925 Msa0559500:CDS
CAGGCTCTTCAACTGAAGAA+TGG 0.470883 4_1:+58687335 Msa0559500:three_prime_UTR
TTGTAAACTCAAGATCTTGA+AGG 0.471884 4_1:+58689472 Msa0559500:three_prime_UTR
GTTTCTTTCCCTCAGAAGGA+GGG 0.472060 4_1:-58683825 None:intergenic
AACAAAACGAAAATGTGATT+CGG 0.474134 4_1:+58684828 Msa0559500:three_prime_UTR
CAGATCATAAGGAAGAGAAA+TGG 0.474728 4_1:+58683495 Msa0559500:CDS
GTTGGGGAGGGTATGCGAAC+TGG 0.475235 4_1:-58683330 None:intergenic
CAAAGTCACAACGCAAATCA+TGG 0.475284 4_1:-58684450 None:intergenic
TTCATGCAGATTCGGATTCA+GGG 0.475639 4_1:+58684092 Msa0559500:intron
GATAAAGATATGGGTGGTAC+TGG 0.476434 4_1:+58683934 Msa0559500:CDS
CAATTCGGTTGTAATCGTAT+AGG 0.476990 4_1:+58691389 Msa0559500:three_prime_UTR
GGAATCACTCCCAGAGCTGC+TGG 0.477857 4_1:-58683986 None:intergenic
CTTGATCCGCTAACCGGAGT+TGG 0.477942 4_1:-58684196 None:intergenic
AATGCACAGCTATGAATAAA+CGG 0.478333 4_1:-58691010 None:intergenic
AGCAGCCCAAGCCAAAGGCC+AGG 0.478818 4_1:+58683379 Msa0559500:CDS
TGTTGGTTTCAGCTTGGGAA+TGG 0.478987 4_1:+58684397 Msa0559500:three_prime_UTR
GTGTTAACATCATGGCCCTT+GGG 0.480899 4_1:-58683048 None:intergenic
TACGAAGATAACGGATCAAA+CGG 0.481212 4_1:-58691513 None:intergenic
TGGCAATGGTCATTTGTAGC+AGG 0.481734 4_1:+58684141 Msa0559500:exon
AGGCCAGGGATCCAAATAAG+AGG 0.482051 4_1:+58683394 Msa0559500:CDS
AGCAGGTTTCAATTTGTCAC+TGG 0.482750 4_1:+58685284 Msa0559500:three_prime_UTR
AGGCTCTTCAACTGAAGAAT+GGG 0.483358 4_1:+58687336 Msa0559500:three_prime_UTR
GGGGATTCGAAGTGCTTGGC+TGG 0.485173 4_1:-58683293 None:intergenic
CCAATTTGGTTCGTTACCGT+TGG 0.486429 4_1:-58682389 None:intergenic
TATCTTTATTTGCTCGCCAT+GGG 0.488601 4_1:+58690469 Msa0559500:three_prime_UTR
TCTTCTACGATCCATGAAAA+GGG 0.489211 4_1:-58685030 None:intergenic
TTGATGAGGATGTTGACATC+GGG 0.489567 4_1:+58683866 Msa0559500:CDS
AATGGCACTGGCCTTGGCAA+CGG 0.490457 4_1:+58690985 Msa0559500:three_prime_UTR
AGAGATTGGGGATGCGATGA+AGG 0.491863 4_1:+58682786 Msa0559500:CDS
GTGAGACTCCGGCGTATCTC+CGG 0.492908 4_1:-58682322 None:intergenic
TGTTTCTTTCCCTCAGAAGG+AGG 0.493964 4_1:-58683826 None:intergenic
GTACTAGCAGGCTCAGGCAG+TGG 0.495175 4_1:-58683264 None:intergenic
TAGTTGTTCTAGAGGCTCTC+GGG 0.496041 4_1:-58690392 None:intergenic
GGAACCACTGGAACTACTAC+TGG 0.498470 4_1:-58683965 None:intergenic
TTTCTTTCCCTCAGAAGGAG+GGG 0.500315 4_1:-58683824 None:intergenic
GCAGCCCAAGCCAAAGGCCA+GGG 0.500330 4_1:+58683380 Msa0559500:CDS
CCAGTGGTTCCAGCAGCTCT+GGG 0.500740 4_1:+58683977 Msa0559500:CDS
AGTTCAATCCAAGCAGAAGA+TGG 0.504015 4_1:-58690918 None:intergenic
AGTGTTAACATCATGGCCCT+TGG 0.504161 4_1:-58683049 None:intergenic
CATCAAAAGACAACCTTACA+CGG 0.504771 4_1:-58687503 None:intergenic
ATTGCAGGGTAATTTGGAAT+GGG 0.505588 4_1:+58687657 Msa0559500:three_prime_UTR
TTGAAGTGCTCGCGTTGGGG+AGG 0.506828 4_1:-58683343 None:intergenic
GTTGGATCGTCGATTGATTG+AGG 0.506931 4_1:-58682515 None:intergenic
CTAACCGGAGTTGGTCTTTG+GGG 0.507460 4_1:-58684187 None:intergenic
GTTTGTGATCCGAGCTGAGC+AGG 0.507962 4_1:+58685267 Msa0559500:three_prime_UTR
TTGATGGAGTTGAGACATCC+AGG 0.509692 4_1:+58687460 Msa0559500:three_prime_UTR
TTTCCCTCTCTGGTTCAACA+TGG 0.510397 4_1:-58683176 None:intergenic
TCACACAATTCTGAATAAAA+CGG 0.511036 4_1:-58691672 None:intergenic
CAATGATCAAAAGCAGTAGT+AGG 0.513612 4_1:+58684493 Msa0559500:three_prime_UTR
ATGTTGAACCAGAGAGGGAA+AGG 0.513945 4_1:+58683178 Msa0559500:CDS
TGTTGTCCTTGATAAATAGC+AGG 0.514573 4_1:+58685127 Msa0559500:three_prime_UTR
TTATCTTGCTCAATCTCCAC+AGG 0.515091 4_1:-58683916 None:intergenic
AACCAGAGAGGGAAAGGGAG+AGG 0.515203 4_1:+58683184 Msa0559500:CDS
GATCAATCCTGACATTCTAC+AGG 0.516099 4_1:+58687316 Msa0559500:three_prime_UTR
CACAACGCAAATCATGGATC+AGG 0.516356 4_1:-58684444 None:intergenic
GGTGAGCAAGATTAAGCGGC+AGG 0.516928 4_1:+58683620 Msa0559500:CDS
AGTGATTGTGTACATCTAAA+GGG 0.517240 4_1:+58687681 Msa0559500:three_prime_UTR
CGCAGAAATTGTCGAGGGGA+GGG 0.517709 4_1:+58685185 Msa0559500:three_prime_UTR
TGAATATGACTGTGGTTGGG+TGG 0.517723 4_1:+58687626 Msa0559500:three_prime_UTR
ATTGACTGTTGGTTTCAGCT+TGG 0.518574 4_1:+58684391 Msa0559500:three_prime_UTR
TTCTTCAATTCCCTCACCGC+AGG 0.519424 4_1:-58682754 None:intergenic
TTTATTTGCTCGCCATGGGA+TGG 0.519477 4_1:+58690473 Msa0559500:three_prime_UTR
TGACAAAAGTGTTAATGTAA+AGG 0.521062 4_1:-58690857 None:intergenic
ATCGCAAAATCACGGCTGGC+CGG 0.521386 4_1:-58682344 None:intergenic
TTTACAGGAATTGCCTGATA+GGG 0.522059 4_1:+58683786 Msa0559500:intron
AATGGGCATTTGGAGCAAGA+TGG 0.522107 4_1:+58683513 Msa0559500:CDS
GCTATAGTGCTTGCATGTGT+TGG 0.522586 4_1:+58684235 Msa0559500:three_prime_UTR
CACTTGAAGTGCTCGCGTTG+GGG 0.524004 4_1:-58683346 None:intergenic
ATTGAGGAAGCGTCATCTGA+TGG 0.524535 4_1:-58682499 None:intergenic
TGGCTGCAACACAGAGGCGG+TGG 0.525481 4_1:+58682409 Msa0559500:CDS
AAGTGATTGTGTACATCTAA+AGG 0.527661 4_1:+58687680 Msa0559500:three_prime_UTR
GTGCCTTCAAACAAAGGCAA+TGG 0.528594 4_1:+58683663 Msa0559500:CDS
TGAGAAAATCTACACCATGC+AGG 0.530337 4_1:+58689515 Msa0559500:three_prime_UTR
CCACCGTTGTGGTTTAGCCT+GGG 0.530502 4_1:-58682676 None:intergenic
ATTAAGCATCCTATGGATCT+GGG 0.531978 4_1:+58682928 Msa0559500:CDS
TTGACAGTGCCCAGATCCAT+AGG 0.532128 4_1:-58682937 None:intergenic
GAGAAAATCTACACCATGCA+GGG 0.532753 4_1:+58689516 Msa0559500:three_prime_UTR
AAAATCCATTAATTGCCGAC+AGG 0.535207 4_1:+58685077 Msa0559500:three_prime_UTR
AAGGACAATAAGTGTGCTGT+TGG 0.535488 4_1:-58687962 None:intergenic
TAGCTGTGCATTATCTCCAA+TGG 0.537076 4_1:+58691021 Msa0559500:three_prime_UTR
AACGGTATACAATAATATTG+AGG 0.538027 4_1:-58691654 None:intergenic
TTGAGGAAGCGTCATCTGAT+GGG 0.538515 4_1:-58682498 None:intergenic
ATTCGACATGTTCATGTATG+TGG 0.538780 4_1:-58690771 None:intergenic
ATATATGAATACGAAGATAA+CGG 0.538893 4_1:-58691522 None:intergenic
TAAAATCGCAAAATCACGGC+TGG 0.539184 4_1:-58682348 None:intergenic
GGGTGGTTGATTGAATTGCA+GGG 0.539536 4_1:+58687643 Msa0559500:three_prime_UTR
TGTGGTAGTATGAGTTGTTG+AGG 0.540068 4_1:+58687716 Msa0559500:three_prime_UTR
AGTAGGATAGATGCTTAAGA+AGG 0.540212 4_1:+58684555 Msa0559500:three_prime_UTR
GAACTGGTGACTGAGCTAAT+GGG 0.540318 4_1:-58683314 None:intergenic
ACGGCTGGCCGGTGAGACTC+CGG 0.540856 4_1:-58682333 None:intergenic
TGAAGTGCTCGCGTTGGGGA+GGG 0.542081 4_1:-58683342 None:intergenic
TTAGAAGTACTAGCAGGCTC+AGG 0.542104 4_1:-58683270 None:intergenic
ATATAGAATGGCATCTTCAT+GGG 0.542232 4_1:+58690255 Msa0559500:three_prime_UTR
GTATTGTGAATGATTATCGT+TGG 0.542418 4_1:-58682533 None:intergenic
GTTATGAATATGACTGTGGT+TGG 0.544198 4_1:+58687622 Msa0559500:three_prime_UTR
CATGAAGATTAACATGATGT+TGG 0.545296 4_1:+58691326 Msa0559500:three_prime_UTR
GATCAACCTCATGATGGGAT+AGG 0.547739 4_1:+58691354 Msa0559500:three_prime_UTR
GTGTACATCTAAAGGGTGAT+GGG 0.547948 4_1:+58687688 Msa0559500:three_prime_UTR
ATTGAGGAAACGTCATACTA+CGG 0.549128 4_1:-58691638 None:intergenic
CCTTACTCATAAAACAGACA+TGG 0.549228 4_1:-58690683 None:intergenic
AGTGCTTGCATGTGTTGGCT+AGG 0.549230 4_1:+58684240 Msa0559500:three_prime_UTR
AACCAACGATCACGCGCAGG+TGG 0.549472 4_1:-58682256 None:intergenic
TGGTCATTTGTAGCAGGGCA+GGG 0.549872 4_1:+58684147 Msa0559500:exon
GAAATCAAAGTCAGAGATTG+GGG 0.550032 4_1:+58682774 Msa0559500:CDS
TGTAAACTCAAGATCTTGAA+GGG 0.550114 4_1:+58689473 Msa0559500:three_prime_UTR
CACTGCACTGCAACAACACA+TGG 0.551166 4_1:-58689440 None:intergenic
TAGTATTGGTAGCTCTAAAG+AGG 0.554360 4_1:-58682188 None:intergenic
ATTAGATACTTAGATACTGC+AGG 0.556284 4_1:-58687876 None:intergenic
GCATCTTCTAGTTGTTCTAG+AGG 0.556880 4_1:-58690400 None:intergenic
TGATGCAACCCCTCCTTCTG+AGG 0.557199 4_1:+58683816 Msa0559500:CDS
AATAATGTGCCTTCAAACAA+AGG 0.557916 4_1:+58683657 Msa0559500:CDS
ACTTGTTCCATCTTCTCTGG+TGG 0.558187 4_1:-58683468 None:intergenic
AAGAGGAAAAGAGAGTGTAA+GGG 0.559339 4_1:-58682171 None:intergenic
AAATTGATGCATAATGGCAC+TGG 0.561991 4_1:+58690973 Msa0559500:three_prime_UTR
GGCTGGTTAGAAGTACTAGC+AGG 0.564980 4_1:-58683276 None:intergenic
ATTTCATGCCGGAGATACGC+CGG 0.565242 4_1:+58682314 Msa0559500:five_prime_UTR
AATGCTATTTGTACAACCAT+AGG 0.565364 4_1:+58689564 Msa0559500:three_prime_UTR
GAGATACGCCGGAGTCTCAC+CGG 0.565508 4_1:+58682325 Msa0559500:five_prime_UTR
TGTTGACACGGAGACTCTCT+GGG 0.565659 4_1:+58683563 Msa0559500:CDS
TGTTGAACCAGAGAGGGAAA+GGG 0.566133 4_1:+58683179 Msa0559500:CDS
CATGCAGGGGATGATTTCAA+AGG 0.566337 4_1:+58689530 Msa0559500:three_prime_UTR
GGCGGTGGAGCTGAATTCAT+GGG 0.566531 4_1:+58682424 Msa0559500:CDS
CTTGAAGCAGCCCAAGCCAA+AGG 0.568683 4_1:+58683374 Msa0559500:CDS
ACCAGAGAGGGAAAGGGAGA+GGG 0.569026 4_1:+58683185 Msa0559500:CDS
TCTTGCTCAATCTCCACAGG+TGG 0.571533 4_1:-58683913 None:intergenic
TCTCTGGGAACTCGATCGAT+TGG 0.573945 4_1:+58683578 Msa0559500:CDS
GCCATAAAATCGCAAAATCA+CGG 0.574801 4_1:-58682352 None:intergenic
TATGGTTGTACAAATAGCAT+TGG 0.575019 4_1:-58689562 None:intergenic
CAAAGACCAACTCCGGTTAG+CGG 0.575476 4_1:+58684190 Msa0559500:three_prime_UTR
TATATAGTCCTCAAAACAGA+GGG 0.576602 4_1:-58685237 None:intergenic
CTGTGTGAGTTGATATAGAA+TGG 0.577642 4_1:+58690243 Msa0559500:three_prime_UTR
AATAAACGGTCCCGTTGCCA+AGG 0.579924 4_1:-58690996 None:intergenic
TCGCCGCAGTGTTAACATCA+TGG 0.579958 4_1:-58683056 None:intergenic
TTGAGGAAACGTCATACTAC+GGG 0.580147 4_1:-58691637 None:intergenic
ATGAATTACAGGCTAGCTCG+TGG 0.582142 4_1:+58683151 Msa0559500:CDS
TGTGTACATCTAAAGGGTGA+TGG 0.582679 4_1:+58687687 Msa0559500:three_prime_UTR
AGCAAACGATTTCCCACCTG+TGG 0.582684 4_1:+58683900 Msa0559500:CDS
ATAAACAATGTTCCATCCCA+TGG 0.583807 4_1:-58690485 None:intergenic
AAAGGGTGATGGGATTATTG+TGG 0.583866 4_1:+58687698 Msa0559500:three_prime_UTR
CATCGAATCGTACACAAAGA+CGG 0.584140 4_1:+58682567 Msa0559500:CDS
TAGTGGGACCACCACCGTTG+TGG 0.584586 4_1:-58682687 None:intergenic
GGCTTTGTATAACTAGACAT+AGG 0.585378 4_1:+58690943 Msa0559500:three_prime_UTR
TTATGAATATGACTGTGGTT+GGG 0.585778 4_1:+58687623 Msa0559500:three_prime_UTR
AACTGGTGACTGAGCTAATG+GGG 0.588096 4_1:-58683313 None:intergenic
TGCATTGACATACAATCCCA+AGG 0.588241 4_1:+58683032 Msa0559500:CDS
GGCAATGGTCATTTGTAGCA+GGG 0.588667 4_1:+58684142 Msa0559500:exon
TTGGTTAAGAAATTTATGCA+TGG 0.589947 4_1:-58687943 None:intergenic
AGTGATTCTGAAGCTGGCAA+TGG 0.592321 4_1:+58684127 Msa0559500:CDS
AGGCTAAACCACAACGGTGG+TGG 0.594359 4_1:+58682679 Msa0559500:CDS
CTTTGAAATCATCCCCTGCA+TGG 0.596189 4_1:-58689529 None:intergenic
GAAAACTCACGCGCTTCCGT+CGG 0.596581 4_1:-58682214 None:intergenic
CCTCCCTGATACATACAACA+TGG 0.596660 4_1:-58684738 None:intergenic
TCGCAGAAATTGTCGAGGGG+AGG 0.597851 4_1:+58685184 Msa0559500:three_prime_UTR
AAATTGAAACCTGCTCAGCT+CGG 0.599524 4_1:-58685276 None:intergenic
GAAGATAGATGCTGTTGATG+AGG 0.601289 4_1:+58683852 Msa0559500:CDS
ATCAAAAGACAACCTTACAC+GGG 0.602605 4_1:-58687502 None:intergenic
TCTCCATGTTGTATGTATCA+GGG 0.605321 4_1:+58684735 Msa0559500:three_prime_UTR
CCACATTGAGAATTTCATGC+CGG 0.605404 4_1:+58682303 Msa0559500:five_prime_UTR
GATGCAACCCCTCCTTCTGA+GGG 0.606162 4_1:+58683817 Msa0559500:CDS
TACATACAACATGGAGAAGG+TGG 0.606321 4_1:-58684729 None:intergenic
TGGTCCCCAAAGACCAACTC+CGG 0.606568 4_1:+58684183 Msa0559500:three_prime_UTR
TAACACTCCTGTAAATGCAA+CGG 0.607221 4_1:+58682876 Msa0559500:CDS
TGAATGCGATGAATATAACT+AGG 0.607871 4_1:+58687288 Msa0559500:three_prime_UTR
CACTGGAACTACTACTGGCA+CGG 0.608769 4_1:-58683960 None:intergenic
GGCCAGGGATCCAAATAAGA+GGG 0.609397 4_1:+58683395 Msa0559500:CDS
TATATCAGTCAGCTGAGCAA+TGG 0.609649 4_1:-58687556 None:intergenic
GAACCATGTTGAACCAGAGA+GGG 0.610145 4_1:+58683173 Msa0559500:CDS
AAAGATATGGGTGGTACTGG+TGG 0.610352 4_1:+58683937 Msa0559500:CDS
GTCTATCCTATCCCATCATG+AGG 0.612224 4_1:-58691360 None:intergenic
ATGTCTGATGTTCCACCACA+CGG 0.612845 4_1:-58691713 None:intergenic
GTGGTCCCACTAAGAAATCA+GGG 0.612863 4_1:+58682698 Msa0559500:CDS
AACTAGAAGATGCTTTGAGA+AGG 0.613004 4_1:+58690410 Msa0559500:three_prime_UTR
TAAGAGGGAAATGAATGTTG+AGG 0.616464 4_1:+58683410 Msa0559500:CDS
TGATATGGAGGCTGTTGACA+CGG 0.617215 4_1:+58683551 Msa0559500:CDS
GGAATTGCCTGATAGGGAGA+AGG 0.617711 4_1:+58683792 Msa0559500:intron
ATAAACCAACGATCACGCGC+AGG 0.620864 4_1:-58682259 None:intergenic
TGTTTGTCGAAACTCTGATG+TGG 0.625592 4_1:+58685476 Msa0559500:three_prime_UTR
TGAGGAAGCGTCATCTGATG+GGG 0.626247 4_1:-58682497 None:intergenic
TTCATCGCAGAAATTGTCGA+GGG 0.626679 4_1:+58685180 Msa0559500:three_prime_UTR
GGGAGTGATTCCTCGTCGAG+TGG 0.628680 4_1:+58683997 Msa0559500:CDS
AGATGGTGAGCAAGATTAAG+CGG 0.630774 4_1:+58683616 Msa0559500:CDS
CTTACTCATAAAACAGACAT+GGG 0.631845 4_1:-58690682 None:intergenic
TGGTTCATGGTAGAGAGACA+TGG 0.636010 4_1:+58685496 Msa0559500:three_prime_UTR
TAATGTTTCTTAATAGCACA+TGG 0.639151 4_1:-58690804 None:intergenic
AATACGAACATTCAATCATG+AGG 0.641285 4_1:+58690608 Msa0559500:three_prime_UTR
TAAGAAATCAGGGAGCAAGA+AGG 0.642181 4_1:+58682708 Msa0559500:CDS
GCTACCAATACTATCTCCGA+CGG 0.644800 4_1:+58682198 Msa0559500:five_prime_UTR
GGGTTGTAGACATTGACTGT+TGG 0.646539 4_1:+58684380 Msa0559500:three_prime_UTR
AGAAAGTAGCAAGTAATCTG+TGG 0.649117 4_1:+58684519 Msa0559500:three_prime_UTR
GCTTCCGTCGGAGATAGTAT+TGG 0.651364 4_1:-58682202 None:intergenic
CGTGCCAGTAGTAGTTCCAG+TGG 0.651947 4_1:+58683961 Msa0559500:CDS
CTTGCTCAATCTCCACAGGT+GGG 0.652511 4_1:-58683912 None:intergenic
TGGGCATTTGGAGCAAGATG+GGG 0.655326 4_1:+58683515 Msa0559500:CDS
GTTGATGAGGATGTTGACAT+CGG 0.656686 4_1:+58683865 Msa0559500:CDS
GAATGCTTACTCTACGCCGT+CGG 0.658777 4_1:+58682975 Msa0559500:CDS
TGATACATACAACATGGAGA+AGG 0.660417 4_1:-58684732 None:intergenic
ACTTACTGTAAATGTGTACA+GGG 0.660792 4_1:-58684622 None:intergenic
TGAGATTGAGCTTGATATGG+AGG 0.664012 4_1:+58683539 Msa0559500:CDS
GCATCGGCGTTATTAGCCAA+CGG 0.665865 4_1:+58682373 Msa0559500:CDS
GGAACCATGTTGAACCAGAG+AGG 0.667661 4_1:+58683172 Msa0559500:CDS
GGGGATGCGATGAAGGCTTG+TGG 0.668675 4_1:+58682793 Msa0559500:CDS
TTATATAGTCCTCAAAACAG+AGG 0.669442 4_1:-58685238 None:intergenic
TGTTTGAATCAACCGTGTGG+TGG 0.673441 4_1:+58691701 Msa0559500:three_prime_UTR
AATCTGATGAGCTATTAATG+TGG 0.674712 4_1:+58691439 Msa0559500:three_prime_UTR
CCGGCATGAAATTCTCAATG+TGG 0.675384 4_1:-58682303 None:intergenic
GCATTGACATACAATCCCAA+GGG 0.679665 4_1:+58683033 Msa0559500:CDS
ACATCAGCAGCAAAATCCGA+CGG 0.681412 4_1:-58682991 None:intergenic
ATTCATCGCAGAAATTGTCG+AGG 0.682405 4_1:+58685179 Msa0559500:three_prime_UTR
CTGACTGATATAGCTGACGA+TGG 0.686698 4_1:+58687567 Msa0559500:three_prime_UTR
GATTACAACCGAATTGTCCG+TGG 0.687546 4_1:-58691382 None:intergenic
GAGCAAGATAAAGATATGGG+TGG 0.688901 4_1:+58683928 Msa0559500:CDS
AATTGGCTGCAACACAGAGG+CGG 0.689298 4_1:+58682406 Msa0559500:CDS
AGAAAATCTACACCATGCAG+GGG 0.690726 4_1:+58689517 Msa0559500:three_prime_UTR
AATCAGGTGAGTTTAAACCC+AGG 0.697049 4_1:+58682659 Msa0559500:CDS
TGTTTCTTAATAGCACATGG+TGG 0.698314 4_1:-58690801 None:intergenic
GCCTTCAAACAAAGGCAATG+GGG 0.698333 4_1:+58683665 Msa0559500:CDS
GAGAGTTATGAATATGACTG+TGG 0.698344 4_1:+58687618 Msa0559500:three_prime_UTR
ACTGGTGACTGAGCTAATGG+GGG 0.699815 4_1:-58683312 None:intergenic
TCATCGCAGAAATTGTCGAG+GGG 0.709533 4_1:+58685181 Msa0559500:three_prime_UTR
CCATGTTGTATGTATCAGGG+AGG 0.722811 4_1:+58684738 Msa0559500:three_prime_UTR
GAACCAAAATGATATCAGTG+AGG 0.723766 4_1:-58685419 None:intergenic
TGATGGGATAGGATAGACCA+CGG 0.725002 4_1:+58691365 Msa0559500:three_prime_UTR
CCCAGGCTAAACCACAACGG+TGG 0.730798 4_1:+58682676 Msa0559500:CDS
CCAAATTGGCTGCAACACAG+AGG 0.734243 4_1:+58682403 Msa0559500:CDS
AGAGGTTATACCACTCGACG+AGG 0.738536 4_1:-58684007 None:intergenic
TCAAAAGACAACCTTACACG+GGG 0.740383 4_1:-58687501 None:intergenic
TTCATGGTAGAGAGACATGG+AGG 0.745685 4_1:+58685499 Msa0559500:three_prime_UTR
AAACCCAGGCTAAACCACAA+CGG 0.749218 4_1:+58682673 Msa0559500:CDS
GGGCCATGATGTTAACACTG+CGG 0.770423 4_1:+58683053 Msa0559500:CDS
ATATAGTCCTCAAAACAGAG+GGG 0.770520 4_1:-58685236 None:intergenic
TGATGAGGATGTTGACATCG+GGG 0.772888 4_1:+58683867 Msa0559500:CDS
CAATGTTTGAATCAACCGTG+TGG 0.789302 4_1:+58691698 Msa0559500:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATTTGATTTATATTTTTT+TGG - chr4_1:58689687-58689706 None:intergenic 10.0%
!! TTGATTTAATTAGAAAAATT+AGG - chr4_1:58690193-58690212 None:intergenic 10.0%
!!! TCTTTTTGTTACTAAATTTA+GGG - chr4_1:58682468-58682487 None:intergenic 15.0%
!! AATAATAGTATCTTCTTTAA+AGG + chr4_1:58684799-58684818 Msa0559500:three_prime_UTR 15.0%
!!! AAGTTGAAGAATTTTTATTT+AGG + chr4_1:58686091-58686110 Msa0559500:three_prime_UTR 15.0%
!!! TTGTTTATGTCATTTTTTAA+AGG + chr4_1:58686220-58686239 Msa0559500:intron 15.0%
!!! ATTTTATTTTTGTTTCTATG+AGG - chr4_1:58686501-58686520 None:intergenic 15.0%
!! ATTGTATATCTATATAACTT+CGG + chr4_1:58687369-58687388 Msa0559500:intron 15.0%
!! ATAAGTAAAAGAAAAAGAAA+AGG - chr4_1:58687984-58688003 None:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG - chr4_1:58688459-58688478 None:intergenic 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG + chr4_1:58688458-58688477 Msa0559500:intron 15.0%
!! AATAACTTAACAAATCAAAA+TGG + chr4_1:58689617-58689636 Msa0559500:intron 15.0%
!! ATAAATCAAATTCATATTCA+TGG + chr4_1:58689694-58689713 Msa0559500:intron 15.0%
!!! GATTGAAAATGTAATTTTAA+AGG + chr4_1:58690214-58690233 Msa0559500:intron 15.0%
!!! TGACTTTTTTACTTTTAAAT+AGG - chr4_1:58690749-58690768 None:intergenic 15.0%
!!! TTTAAAATTAATATTTGTCC+CGG + chr4_1:58691205-58691224 Msa0559500:intron 15.0%
!!! TCGTATTCATATATTTTTAT+AGG + chr4_1:58691531-58691550 Msa0559500:three_prime_UTR 15.0%
!!! ATTCATATATTTTTATAGGT+AGG + chr4_1:58691535-58691554 Msa0559500:three_prime_UTR 15.0%
!!! CTCTTTTTGTTACTAAATTT+AGG - chr4_1:58682469-58682488 None:intergenic 20.0%
!! ATCATTCAACAGAATAAAAA+TGG - chr4_1:58683706-58683725 None:intergenic 20.0%
!! AAAGACAATCATGATAAATT+TGG - chr4_1:58684344-58684363 None:intergenic 20.0%
!!! GTAAGATTTATTGATTCTTT+CGG - chr4_1:58684874-58684893 None:intergenic 20.0%
!! AAAAAATTTGAATTTCCTGT+CGG - chr4_1:58685095-58685114 None:intergenic 20.0%
!!! TCAAATTTTTTGTTTGTTTG+TGG + chr4_1:58685104-58685123 Msa0559500:three_prime_UTR 20.0%
!!! TTCATTTTGTTATTCATACT+TGG + chr4_1:58685599-58685618 Msa0559500:intron 20.0%
!! TTAGATTACTTTCCATATTT+AGG - chr4_1:58685729-58685748 None:intergenic 20.0%
!! AATACAGTATTGTATACTAA+TGG + chr4_1:58685748-58685767 Msa0559500:three_prime_UTR 20.0%
!!! CTTAATCCTTTGTTTTTATT+TGG + chr4_1:58686006-58686025 Msa0559500:intron 20.0%
!! TACTAACCAAATAAAAACAA+AGG - chr4_1:58686015-58686034 None:intergenic 20.0%
!! TTATAGCTACATATGAAAAA+TGG + chr4_1:58686137-58686156 Msa0559500:intron 20.0%
!! ATAATTTATGCAATTCAAGA+AGG + chr4_1:58686163-58686182 Msa0559500:intron 20.0%
!! TGACATAAACAAATAATAAG+AGG - chr4_1:58686212-58686231 None:intergenic 20.0%
!! ACTAAAAAGAAGAAGAAAAA+AGG - chr4_1:58686428-58686447 None:intergenic 20.0%
!!! TTAATGCTAAAAAGTATATG+CGG - chr4_1:58686572-58686591 None:intergenic 20.0%
!! TGTTTCAATAGTTAACAATT+TGG - chr4_1:58686975-58686994 None:intergenic 20.0%
!! TTTCACTTAATTGTTTAACT+TGG + chr4_1:58687014-58687033 Msa0559500:intron 20.0%
!!! AACAGATTTTTGCAAAAAAA+AGG - chr4_1:58687058-58687077 None:intergenic 20.0%
!! TTACTATAAATATTTGCATC+TGG + chr4_1:58687177-58687196 Msa0559500:intron 20.0%
!! TACTATAAATATTTGCATCT+GGG + chr4_1:58687178-58687197 Msa0559500:intron 20.0%
!! CAACATAAAAATACCAAAAT+AGG - chr4_1:58687836-58687855 None:intergenic 20.0%
!! TTCAGAATTCATATTAATCA+AGG - chr4_1:58688023-58688042 None:intergenic 20.0%
!! AATGATCATTTATTTACCTA+TGG - chr4_1:58689583-58689602 None:intergenic 20.0%
!! AAATATTATCCATAACTGAA+GGG - chr4_1:58689657-58689676 None:intergenic 20.0%
!!! AGAAAACAAAACAGTTTTTT+AGG - chr4_1:58689846-58689865 None:intergenic 20.0%
!! TTCTATTCTTCTTTACTTAT+TGG + chr4_1:58689894-58689913 Msa0559500:intron 20.0%
!! ACTATCAAAAAAGCTAAAAA+TGG - chr4_1:58690080-58690099 None:intergenic 20.0%
!!! ATTTTGGATATATAGAATCT+TGG + chr4_1:58690151-58690170 Msa0559500:intron 20.0%
!!! GAAAATGTAATTTTAAAGGT+TGG + chr4_1:58690218-58690237 Msa0559500:intron 20.0%
!! CATTGTTTATCAATTTATGA+AGG + chr4_1:58690498-58690517 Msa0559500:three_prime_UTR 20.0%
!!! TGTTTCTAAGTAATATATAG+AGG + chr4_1:58690893-58690912 Msa0559500:three_prime_UTR 20.0%
!! TGGAAAGAAGAAAAATATAT+AGG - chr4_1:58691086-58691105 None:intergenic 20.0%
!! TCAAAGAAAAATGATTCTTA+TGG - chr4_1:58691173-58691192 None:intergenic 20.0%
!!! AATCATTTTTCTTTGAATCT+TGG + chr4_1:58691177-58691196 Msa0559500:intron 20.0%
!! AAAAAAAAAAAAACATCACC+GGG - chr4_1:58691226-58691245 None:intergenic 20.0%
!! CAAAAAAAAAAAAACATCAC+CGG - chr4_1:58691227-58691246 None:intergenic 20.0%
!! ATATATGAATACGAAGATAA+CGG - chr4_1:58691525-58691544 None:intergenic 20.0%
!! TGTTACTAAATTTAGGGTTA+GGG - chr4_1:58682462-58682481 None:intergenic 25.0%
!! TTGTTACTAAATTTAGGGTT+AGG - chr4_1:58682463-58682482 None:intergenic 25.0%
!!! AAGTTTTGATGATGAATTAC+AGG + chr4_1:58683140-58683159 Msa0559500:CDS 25.0%
! CAGAATAAAAATGGACAATA+AGG - chr4_1:58683697-58683716 None:intergenic 25.0%
! ATTGAGCAAGATAAAGATAT+GGG + chr4_1:58683925-58683944 Msa0559500:CDS 25.0%
!!! TCTTTAAACTTGTTGTAACA+GGG + chr4_1:58684359-58684378 Msa0559500:intron 25.0%
! AATTCTTTCTCCAAAATTTG+AGG - chr4_1:58684662-58684681 None:intergenic 25.0%
!!! TTTTGGAGAAAGAATTTTTG+TGG + chr4_1:58684666-58684685 Msa0559500:three_prime_UTR 25.0%
! GATGACCTTATTCAAATTAA+GGG + chr4_1:58684760-58684779 Msa0559500:three_prime_UTR 25.0%
! AACAAAACGAAAATGTGATT+CGG + chr4_1:58684828-58684847 Msa0559500:three_prime_UTR 25.0%
! TTACTGTTGAATTCTGATTA+TGG + chr4_1:58684917-58684936 Msa0559500:three_prime_UTR 25.0%
!! TCTCATTCTTTTTGCTTAAA+GGG + chr4_1:58684987-58685006 Msa0559500:three_prime_UTR 25.0%
!!! AGGTTTGTTTCAAACTTTTA+AGG + chr4_1:58685147-58685166 Msa0559500:three_prime_UTR 25.0%
!!! GTTTCAAACTTTTAAGGATT+TGG + chr4_1:58685153-58685172 Msa0559500:three_prime_UTR 25.0%
! CACAATTACATAATTCAAAG+AGG - chr4_1:58685635-58685654 None:intergenic 25.0%
!!! ACATACATCAATTGTTTTTG+TGG - chr4_1:58685688-58685707 None:intergenic 25.0%
!!! GAAGAATTTTTATTTAGGTG+TGG + chr4_1:58686096-58686115 Msa0559500:intron 25.0%
! ACAAATAATAAGAGGTTCTA+CGG - chr4_1:58686204-58686223 None:intergenic 25.0%
! TTGATTGTGTCAAACAAAAT+TGG - chr4_1:58686320-58686339 None:intergenic 25.0%
! ACAATTGTTGATCTTAATAG+AGG + chr4_1:58686378-58686397 Msa0559500:intron 25.0%
!!! TTCTTCTTCTTTTTAGTATG+AGG + chr4_1:58686431-58686450 Msa0559500:intron 25.0%
! CATTTGTACATGCAAAAAAA+TGG - chr4_1:58686466-58686485 None:intergenic 25.0%
! ATTCCAATTATGAATTTCAG+AGG + chr4_1:58686519-58686538 Msa0559500:intron 25.0%
!! ATAACTAGCATTGAATTTCA+TGG + chr4_1:58686749-58686768 Msa0559500:intron 25.0%
! ATTCAAACTCATTATCTAGA+AGG - chr4_1:58686806-58686825 None:intergenic 25.0%
! TATCACTTATCAACACAAAT+GGG - chr4_1:58686897-58686916 None:intergenic 25.0%
! TTATCACTTATCAACACAAA+TGG - chr4_1:58686898-58686917 None:intergenic 25.0%
! TAACAAAAGTAATATCAGTG+AGG - chr4_1:58687227-58687246 None:intergenic 25.0%
!!! TAGATTCAGTTGAGTTTTTT+TGG + chr4_1:58687788-58687807 Msa0559500:three_prime_UTR 25.0%
!!! ATTCTTTTTTCCTCCTATTT+TGG + chr4_1:58687820-58687839 Msa0559500:three_prime_UTR 25.0%
! CATAAAAATACCAAAATAGG+AGG - chr4_1:58687833-58687852 None:intergenic 25.0%
! TTGGTTAAGAAATTTATGCA+TGG - chr4_1:58687946-58687965 None:intergenic 25.0%
! AGTAAAAAGATAAGGACTTA+GGG - chr4_1:58688451-58688470 None:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG - chr4_1:58688452-58688471 None:intergenic 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + chr4_1:58689060-58689079 Msa0559500:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG - chr4_1:58689195-58689214 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG + chr4_1:58689202-58689221 Msa0559500:intron 25.0%
!!! TAACACTTTTAAGATTCACT+TGG + chr4_1:58689372-58689391 Msa0559500:three_prime_UTR 25.0%
! CAAATATTATCCATAACTGA+AGG - chr4_1:58689658-58689677 None:intergenic 25.0%
!!! TTAGCTTTTTTGATAGTAGA+TGG + chr4_1:58690083-58690102 Msa0559500:intron 25.0%
!! TTGATAGTAGATGGATAAAT+TGG + chr4_1:58690092-58690111 Msa0559500:intron 25.0%
! TTTAAATAGGTATGCGATTT+CGG - chr4_1:58690736-58690755 None:intergenic 25.0%
! TAATGTTTCTTAATAGCACA+TGG - chr4_1:58690807-58690826 None:intergenic 25.0%
!!! TGACAAAAGTGTTAATGTAA+AGG - chr4_1:58690860-58690879 None:intergenic 25.0%
! AACGGTATACAATAATATTG+AGG - chr4_1:58691657-58691676 None:intergenic 25.0%
! TCACACAATTCTGAATAAAA+CGG - chr4_1:58691675-58691694 None:intergenic 25.0%
! ATTTTGCGATTTTATGGCAT+CGG + chr4_1:58682357-58682376 Msa0559500:exon 30.0%
GTATTGTGAATGATTATCGT+TGG - chr4_1:58682536-58682555 None:intergenic 30.0%
AAGAAATCAAAGTCAGAGAT+TGG + chr4_1:58682772-58682791 Msa0559500:CDS 30.0%
AGAAATCAAAGTCAGAGATT+GGG + chr4_1:58682773-58682792 Msa0559500:CDS 30.0%
AAGCTCATGAAAAACAAAAG+TGG + chr4_1:58682829-58682848 Msa0559500:CDS 30.0%
TCATGAAAAACAAAAGTGGT+TGG + chr4_1:58682833-58682852 Msa0559500:CDS 30.0%
TGATGTAATTAAGCATCCTA+TGG + chr4_1:58682921-58682940 Msa0559500:CDS 30.0%
TCATCAAATTTCTCGTGTAT+TGG - chr4_1:58683117-58683136 None:intergenic 30.0%
ACATTCATTTCCCTCTTATT+TGG - chr4_1:58683408-58683427 None:intergenic 30.0%
TGTTGAGGAAAAACATAAGT+TGG + chr4_1:58683425-58683444 Msa0559500:CDS 30.0%
GTTGAGGAAAAACATAAGTT+GGG + chr4_1:58683426-58683445 Msa0559500:CDS 30.0%
! AAAAACATAAGTTGGGACTA+GGG + chr4_1:58683433-58683452 Msa0559500:CDS 30.0%
AACAAGTAGTACAGATCATA+AGG + chr4_1:58683484-58683503 Msa0559500:CDS 30.0%
AGATCATAAGGAAGAGAAAT+GGG + chr4_1:58683496-58683515 Msa0559500:CDS 30.0%
AATAATGTGCCTTCAAACAA+AGG + chr4_1:58683657-58683676 Msa0559500:CDS 30.0%
!! AATTTGTTGTGTGCATTTAC+AGG + chr4_1:58683771-58683790 Msa0559500:intron 30.0%
GATTGAGCAAGATAAAGATA+TGG + chr4_1:58683924-58683943 Msa0559500:CDS 30.0%
!! TTTGTACTCTGAAATCATCA+TGG + chr4_1:58684048-58684067 Msa0559500:intron 30.0%
!! TTGTACTCTGAAATCATCAT+GGG + chr4_1:58684049-58684068 Msa0559500:intron 30.0%
! TTTTGATCTTCATGCAGATT+CGG + chr4_1:58684084-58684103 Msa0559500:intron 30.0%
!!! GTACATTTTTTACTCTGCTA+TGG + chr4_1:58684289-58684308 Msa0559500:intron 30.0%
ACAATCATGATAAATTTGGC+CGG - chr4_1:58684340-58684359 None:intergenic 30.0%
!! GTCTTTAAACTTGTTGTAAC+AGG + chr4_1:58684358-58684377 Msa0559500:intron 30.0%
!! CTTTAAACTTGTTGTAACAG+GGG + chr4_1:58684360-58684379 Msa0559500:intron 30.0%
ATAGATGCTTAAGAAGGTTT+AGG + chr4_1:58684561-58684580 Msa0559500:three_prime_UTR 30.0%
ACTTACTGTAAATGTGTACA+GGG - chr4_1:58684625-58684644 None:intergenic 30.0%
TACTTACTGTAAATGTGTAC+AGG - chr4_1:58684626-58684645 None:intergenic 30.0%
! AAATCACTCTCCTCAAATTT+TGG + chr4_1:58684649-58684668 Msa0559500:three_prime_UTR 30.0%
GGATGACCTTATTCAAATTA+AGG + chr4_1:58684759-58684778 Msa0559500:three_prime_UTR 30.0%
! CACTTCCCTTAATTTGAATA+AGG - chr4_1:58684768-58684787 None:intergenic 30.0%
CTTATTCAAATTAAGGGAAG+TGG + chr4_1:58684766-58684785 Msa0559500:three_prime_UTR 30.0%
!! GCGTCTTCGTTTAAAATTTT+TGG + chr4_1:58684945-58684964 Msa0559500:three_prime_UTR 30.0%
! GTCTCATTCTTTTTGCTTAA+AGG + chr4_1:58684986-58685005 Msa0559500:three_prime_UTR 30.0%
! TTTGTCTTTTTCCCTTTTCA+TGG + chr4_1:58685019-58685038 Msa0559500:three_prime_UTR 30.0%
! AACAAACCTGCTATTTATCA+AGG - chr4_1:58685136-58685155 None:intergenic 30.0%
TATATAGTCCTCAAAACAGA+GGG - chr4_1:58685240-58685259 None:intergenic 30.0%
TTATATAGTCCTCAAAACAG+AGG - chr4_1:58685241-58685260 None:intergenic 30.0%
!!! TCTGTTTTGAGGACTATATA+AGG + chr4_1:58685240-58685259 Msa0559500:three_prime_UTR 30.0%
! TTCATCGTCAATTGAGTTTT+AGG + chr4_1:58685345-58685364 Msa0559500:three_prime_UTR 30.0%
! AAACCTCACTGATATCATTT+TGG + chr4_1:58685416-58685435 Msa0559500:three_prime_UTR 30.0%
! TTCTGATTTTGAATTTGCGA+TGG + chr4_1:58685439-58685458 Msa0559500:three_prime_UTR 30.0%
! AGCAAAACTTGAACAGATTT+TGG - chr4_1:58685557-58685576 None:intergenic 30.0%
TACCCTCTGTTATTGTTATA+GGG + chr4_1:58685660-58685679 Msa0559500:intron 30.0%
! ATTGATGTATGTTTTCCAGA+AGG + chr4_1:58685696-58685715 Msa0559500:three_prime_UTR 30.0%
! TCTTCAACTTGAATGCTTTT+AGG - chr4_1:58686081-58686100 None:intergenic 30.0%
!! AGACCTCTGAAATTCATAAT+TGG - chr4_1:58686525-58686544 None:intergenic 30.0%
ATAACACAAGATAGAAATCG+AGG + chr4_1:58686824-58686843 Msa0559500:intron 30.0%
AAACACCAATTTAGTGAGTT+TGG + chr4_1:58686990-58687009 Msa0559500:intron 30.0%
GAAAACCAAACTCACTAAAT+TGG - chr4_1:58686998-58687017 None:intergenic 30.0%
ATAAATATTTGCATCTGGGA+TGG + chr4_1:58687182-58687201 Msa0559500:intron 30.0%
TGAATGCGATGAATATAACT+AGG + chr4_1:58687288-58687307 Msa0559500:three_prime_UTR 30.0%
TTATGAATATGACTGTGGTT+GGG + chr4_1:58687623-58687642 Msa0559500:three_prime_UTR 30.0%
AAGTGATTGTGTACATCTAA+AGG + chr4_1:58687680-58687699 Msa0559500:three_prime_UTR 30.0%
AGTGATTGTGTACATCTAAA+GGG + chr4_1:58687681-58687700 Msa0559500:three_prime_UTR 30.0%
ATTAGATACTTAGATACTGC+AGG - chr4_1:58687879-58687898 None:intergenic 30.0%
!! GCACTTAGTTTTCATTGATT+TGG + chr4_1:58688245-58688264 Msa0559500:intron 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG + chr4_1:58688251-58688270 Msa0559500:intron 30.0%
TATTGTTATGGGAAAATCTC+TGG - chr4_1:58688409-58688428 None:intergenic 30.0%
! AGAGATTTTCCCATAACAAT+AGG + chr4_1:58688408-58688427 Msa0559500:intron 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG + chr4_1:58688470-58688489 Msa0559500:intron 30.0%
TGGAATGTAACTTCAGTAAA+AGG + chr4_1:58688649-58688668 Msa0559500:intron 30.0%
ATATCTAAACCGTGTAACTT+GGG - chr4_1:58688721-58688740 None:intergenic 30.0%
TTACACGGTTTAGATATCTT+GGG + chr4_1:58688724-58688743 Msa0559500:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG - chr4_1:58689056-58689075 None:intergenic 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - chr4_1:58689185-58689204 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - chr4_1:58689207-58689226 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG - chr4_1:58689242-58689261 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG + chr4_1:58689246-58689265 Msa0559500:intron 30.0%
TCTTTGATAGAACATTATGG+CGG + chr4_1:58689249-58689268 Msa0559500:intron 30.0%
TTGTAAACTCAAGATCTTGA+AGG + chr4_1:58689472-58689491 Msa0559500:three_prime_UTR 30.0%
TGTAAACTCAAGATCTTGAA+GGG + chr4_1:58689473-58689492 Msa0559500:three_prime_UTR 30.0%
TATGGTTGTACAAATAGCAT+TGG - chr4_1:58689565-58689584 None:intergenic 30.0%
! AATGCTATTTGTACAACCAT+AGG + chr4_1:58689564-58689583 Msa0559500:three_prime_UTR 30.0%
AAATTTCAACCCTTCAGTTA+TGG + chr4_1:58689645-58689664 Msa0559500:intron 30.0%
TTCTTCTTTACTTATTGGAC+CGG + chr4_1:58689899-58689918 Msa0559500:intron 30.0%
TATGAGTGTTATATAGGTGT+TGG - chr4_1:58689928-58689947 None:intergenic 30.0%
CATGAAATGTTGATCAACAA+GGG + chr4_1:58690024-58690043 Msa0559500:intron 30.0%
ATGAAATGTTGATCAACAAG+GGG + chr4_1:58690025-58690044 Msa0559500:intron 30.0%
TATCCAAAATATTTGCACTG+TGG - chr4_1:58690141-58690160 None:intergenic 30.0%
ATATAGAATGGCATCTTCAT+GGG + chr4_1:58690255-58690274 Msa0559500:three_prime_UTR 30.0%
GCAAATGTAGCTCAATTAAT+AGG + chr4_1:58690295-58690314 Msa0559500:three_prime_UTR 30.0%
! TTAGATGCAGTAAAGTTGAT+TGG + chr4_1:58690319-58690338 Msa0559500:three_prime_UTR 30.0%
! TAGATGCAGTAAAGTTGATT+GGG + chr4_1:58690320-58690339 Msa0559500:three_prime_UTR 30.0%
! TTTGAGAAGGTCTTCTATTT+TGG + chr4_1:58690423-58690442 Msa0559500:three_prime_UTR 30.0%
!!! TATTTTGGTCAATAGTTGTC+AGG + chr4_1:58690438-58690457 Msa0559500:three_prime_UTR 30.0%
AATACGAACATTCAATCATG+AGG + chr4_1:58690608-58690627 Msa0559500:three_prime_UTR 30.0%
CTTACTCATAAAACAGACAT+GGG - chr4_1:58690685-58690704 None:intergenic 30.0%
! CATTATGCATCAATTTTCTC+AGG - chr4_1:58690969-58690988 None:intergenic 30.0%
CTGAGAAAATTGATGCATAA+TGG + chr4_1:58690967-58690986 Msa0559500:three_prime_UTR 30.0%
AATGCACAGCTATGAATAAA+CGG - chr4_1:58691013-58691032 None:intergenic 30.0%
CATCGAGATTTCAAAATGAA+TGG - chr4_1:58691106-58691125 None:intergenic 30.0%
CTCTGTTTGTATTCAGTTAT+AGG + chr4_1:58691145-58691164 Msa0559500:intron 30.0%
CATGAAGATTAACATGATGT+TGG + chr4_1:58691326-58691345 Msa0559500:three_prime_UTR 30.0%
!!! GATTAACATGATGTTGGTTT+TGG + chr4_1:58691332-58691351 Msa0559500:three_prime_UTR 30.0%
! GTATAGGACTTTGTGTTTTA+TGG + chr4_1:58691405-58691424 Msa0559500:three_prime_UTR 30.0%
AATCTGATGAGCTATTAATG+TGG + chr4_1:58691439-58691458 Msa0559500:three_prime_UTR 30.0%
! AAGAGGAAAAGAGAGTGTAA+GGG - chr4_1:58682174-58682193 None:intergenic 35.0%
! AAAGAGGAAAAGAGAGTGTA+AGG - chr4_1:58682175-58682194 None:intergenic 35.0%
!! TAGTATTGGTAGCTCTAAAG+AGG - chr4_1:58682191-58682210 None:intergenic 35.0%
GCCATAAAATCGCAAAATCA+CGG - chr4_1:58682355-58682374 None:intergenic 35.0%
! CTAAATTTAGGGTTAGGGTT+AGG - chr4_1:58682457-58682476 None:intergenic 35.0%
CTTAAGACTCGAATTGAATC+AGG + chr4_1:58682643-58682662 Msa0559500:CDS 35.0%
GAAATCAAAGTCAGAGATTG+GGG + chr4_1:58682774-58682793 Msa0559500:CDS 35.0%
! GTGGTTGGATTTTTAACACT+TGG + chr4_1:58682848-58682867 Msa0559500:CDS 35.0%
TAACACTCCTGTAAATGCAA+CGG + chr4_1:58682876-58682895 Msa0559500:CDS 35.0%
AATTAAGCATCCTATGGATC+TGG + chr4_1:58682927-58682946 Msa0559500:CDS 35.0%
ATTAAGCATCCTATGGATCT+GGG + chr4_1:58682928-58682947 Msa0559500:CDS 35.0%
TAAGAGGGAAATGAATGTTG+AGG + chr4_1:58683410-58683429 Msa0559500:CDS 35.0%
! GAAAAACATAAGTTGGGACT+AGG + chr4_1:58683432-58683451 Msa0559500:CDS 35.0%
CAGATCATAAGGAAGAGAAA+TGG + chr4_1:58683495-58683514 Msa0559500:CDS 35.0%
GGTTACCAATTGGAAAAAGA+TGG + chr4_1:58683599-58683618 Msa0559500:CDS 35.0%
ATTTACAGGAATTGCCTGAT+AGG + chr4_1:58683785-58683804 Msa0559500:intron 35.0%
TTTACAGGAATTGCCTGATA+GGG + chr4_1:58683786-58683805 Msa0559500:intron 35.0%
CTGCATGAAGATCAAAATTG+AGG - chr4_1:58684081-58684100 None:intergenic 35.0%
!! TGTGACTTTGGAGTGTATAA+AGG + chr4_1:58684463-58684482 Msa0559500:three_prime_UTR 35.0%
!! GTGACTTTGGAGTGTATAAA+GGG + chr4_1:58684464-58684483 Msa0559500:three_prime_UTR 35.0%
! TTTGGAGTGTATAAAGGGTT+TGG + chr4_1:58684469-58684488 Msa0559500:three_prime_UTR 35.0%
CAATGATCAAAAGCAGTAGT+AGG + chr4_1:58684493-58684512 Msa0559500:three_prime_UTR 35.0%
AGAAAGTAGCAAGTAATCTG+TGG + chr4_1:58684519-58684538 Msa0559500:three_prime_UTR 35.0%
GTGGTAAAAGTTTCTCTAGT+AGG + chr4_1:58684538-58684557 Msa0559500:three_prime_UTR 35.0%
AGTAGGATAGATGCTTAAGA+AGG + chr4_1:58684555-58684574 Msa0559500:three_prime_UTR 35.0%
TGATACATACAACATGGAGA+AGG - chr4_1:58684735-58684754 None:intergenic 35.0%
TTCTCCATGTTGTATGTATC+AGG + chr4_1:58684734-58684753 Msa0559500:three_prime_UTR 35.0%
TCTCCATGTTGTATGTATCA+GGG + chr4_1:58684735-58684754 Msa0559500:three_prime_UTR 35.0%
!!! ATTTTTGGTCTGCTTTTGTC+AGG + chr4_1:58684960-58684979 Msa0559500:three_prime_UTR 35.0%
TCTTCTACGATCCATGAAAA+GGG - chr4_1:58685033-58685052 None:intergenic 35.0%
ATCTTCTACGATCCATGAAA+AGG - chr4_1:58685034-58685053 None:intergenic 35.0%
TGGATCGTAGAAGATGTATT+TGG + chr4_1:58685039-58685058 Msa0559500:three_prime_UTR 35.0%
!!! TGTCGGCAATTAATGGATTT+TGG - chr4_1:58685078-58685097 None:intergenic 35.0%
AAAATCCATTAATTGCCGAC+AGG + chr4_1:58685077-58685096 Msa0559500:three_prime_UTR 35.0%
AATTTCCTGTCGGCAATTAA+TGG - chr4_1:58685085-58685104 None:intergenic 35.0%
TGTTGTCCTTGATAAATAGC+AGG + chr4_1:58685127-58685146 Msa0559500:three_prime_UTR 35.0%
! TATTTTACCCCTCTGTTTTG+AGG + chr4_1:58685229-58685248 Msa0559500:three_prime_UTR 35.0%
ATATAGTCCTCAAAACAGAG+GGG - chr4_1:58685239-58685258 None:intergenic 35.0%
! AGGTTCATTCTGTGAGATTT+TGG + chr4_1:58685365-58685384 Msa0559500:three_prime_UTR 35.0%
! TTCATTCTGTGAGATTTTGG+TGG + chr4_1:58685368-58685387 Msa0559500:three_prime_UTR 35.0%
GAACCAAAATGATATCAGTG+AGG - chr4_1:58685422-58685441 None:intergenic 35.0%
GAGTTTCGACAAACAATCAA+TGG - chr4_1:58685471-58685490 None:intergenic 35.0%
GATCAGGTTTCAAAAAGGTT+GGG - chr4_1:58685532-58685551 None:intergenic 35.0%
TGATCAGGTTTCAAAAAGGT+TGG - chr4_1:58685533-58685552 None:intergenic 35.0%
TGGTTGATCAGGTTTCAAAA+AGG - chr4_1:58685537-58685556 None:intergenic 35.0%
!!! TGAACAGATTTTGGTTGATC+AGG - chr4_1:58685548-58685567 None:intergenic 35.0%
!! AGTTTTGCTGATTGATGAGA+AGG + chr4_1:58685568-58685587 Msa0559500:three_prime_UTR 35.0%
GTACCCTCTGTTATTGTTAT+AGG + chr4_1:58685659-58685678 Msa0559500:intron 35.0%
CACCCTATAACAATAACAGA+GGG - chr4_1:58685665-58685684 None:intergenic 35.0%
! GTATGTTTTCCAGAAGGATT+AGG + chr4_1:58685702-58685721 Msa0559500:three_prime_UTR 35.0%
TATTTAGGTCCTAATCCTTC+TGG - chr4_1:58685714-58685733 None:intergenic 35.0%
GAAGGATTAGGACCTAAATA+TGG + chr4_1:58685714-58685733 Msa0559500:three_prime_UTR 35.0%
! AAGTTTCTTGCTGTCAAAGA+AGG + chr4_1:58685789-58685808 Msa0559500:intron 35.0%
CATGTTTGTGAAATTGCATC+AGG + chr4_1:58685876-58685895 Msa0559500:intron 35.0%
!! AAGTGCTGATCTTCTTACAA+TGG + chr4_1:58685967-58685986 Msa0559500:intron 35.0%
CCTGTCATATGTAAAGTTTG+AGG - chr4_1:58686048-58686067 None:intergenic 35.0%
CCTCAAACTTTACATATGAC+AGG + chr4_1:58686045-58686064 Msa0559500:intron 35.0%
CAAACTTTACATATGACAGG+TGG + chr4_1:58686048-58686067 Msa0559500:intron 35.0%
TTTATGCAATTCAAGAAGGC+TGG + chr4_1:58686167-58686186 Msa0559500:intron 35.0%
GTTGATCTTAATAGAGGAAC+AGG + chr4_1:58686384-58686403 Msa0559500:intron 35.0%
GAAGAAGAAAAAAGGAAGAC+AGG - chr4_1:58686420-58686439 None:intergenic 35.0%
GTTGTCTGCTTCAAAACAAA+GGG - chr4_1:58686606-58686625 None:intergenic 35.0%
GTTTGTAAAGCTCTTGAGTT+TGG - chr4_1:58686628-58686647 None:intergenic 35.0%
ACAAGATAGAAATCGAGGTT+GGG + chr4_1:58686829-58686848 Msa0559500:intron 35.0%
! TGGGGATTAGTACAAATCAA+AGG + chr4_1:58686848-58686867 Msa0559500:intron 35.0%
! GGGGATTAGTACAAATCAAA+GGG + chr4_1:58686849-58686868 Msa0559500:intron 35.0%
ATCAGTATGAGTTGCAGATA+AGG + chr4_1:58687135-58687154 Msa0559500:intron 35.0%
TATTGTCTGAGTTGCAGATA+AGG + chr4_1:58687256-58687275 Msa0559500:intron 35.0%
TGACATGAGTGCTATATTTC+AGG + chr4_1:58687430-58687449 Msa0559500:intron 35.0%
GACATGAGTGCTATATTTCA+GGG + chr4_1:58687431-58687450 Msa0559500:intron 35.0%
ATCAAAAGACAACCTTACAC+GGG - chr4_1:58687505-58687524 None:intergenic 35.0%
CATCAAAAGACAACCTTACA+CGG - chr4_1:58687506-58687525 None:intergenic 35.0%
GAGAGTTATGAATATGACTG+TGG + chr4_1:58687618-58687637 Msa0559500:three_prime_UTR 35.0%
GTTATGAATATGACTGTGGT+TGG + chr4_1:58687622-58687641 Msa0559500:three_prime_UTR 35.0%
GATTGAATTGCAGGGTAATT+TGG + chr4_1:58687651-58687670 Msa0559500:three_prime_UTR 35.0%
AATTGCAGGGTAATTTGGAA+TGG + chr4_1:58687656-58687675 Msa0559500:three_prime_UTR 35.0%
! ATTGCAGGGTAATTTGGAAT+GGG + chr4_1:58687657-58687676 Msa0559500:three_prime_UTR 35.0%
GAATCTACACACACAAGAAA+TGG - chr4_1:58687775-58687794 None:intergenic 35.0%
! TAACGTGAGTCTCTTTTCTT+AGG - chr4_1:58688125-58688144 None:intergenic 35.0%
AAGAAAAGAGACTCACGTTA+CGG + chr4_1:58688125-58688144 Msa0559500:intron 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG + chr4_1:58688150-58688169 Msa0559500:intron 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG + chr4_1:58688151-58688170 Msa0559500:intron 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG - chr4_1:58688340-58688359 None:intergenic 35.0%
! TCTGCAAAAAGCATACATCT+CGG - chr4_1:58688516-58688535 None:intergenic 35.0%
TAGAAACAAGACGGAGTATA+TGG + chr4_1:58688629-58688648 Msa0559500:intron 35.0%
AACTTCAGTAAAAGGAGAAG+TGG + chr4_1:58688657-58688676 Msa0559500:intron 35.0%
ACTTCAGTAAAAGGAGAAGT+GGG + chr4_1:58688658-58688677 Msa0559500:intron 35.0%
ATATCATACCCCAAGTTACA+CGG + chr4_1:58688709-58688728 Msa0559500:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG - chr4_1:58688720-58688739 None:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG - chr4_1:58688722-58688741 None:intergenic 35.0%
GTTACACGGTTTAGATATCT+TGG + chr4_1:58688723-58688742 Msa0559500:intron 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG - chr4_1:58688751-58688770 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG + chr4_1:58688784-58688803 Msa0559500:intron 35.0%
AACTTTCCTTTCAGCTTAAG+TGG - chr4_1:58688858-58688877 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG + chr4_1:58688862-58688881 Msa0559500:intron 35.0%
AGACTAGACATGATAGGATT+AGG + chr4_1:58688997-58689016 Msa0559500:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG + chr4_1:58689049-58689068 Msa0559500:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + chr4_1:58689069-58689088 Msa0559500:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG + chr4_1:58689074-58689093 Msa0559500:intron 35.0%
TTGATCTACTCTTCTTACCA+CGG - chr4_1:58689126-58689145 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG + chr4_1:58689127-58689146 Msa0559500:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG + chr4_1:58689130-58689149 Msa0559500:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG + chr4_1:58689214-58689233 Msa0559500:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + chr4_1:58689226-58689245 Msa0559500:intron 35.0%
! TATGAAGCACAAACACCTTT+TGG + chr4_1:58689729-58689748 Msa0559500:intron 35.0%
AGCTCGTATGAGTGTTATAT+AGG - chr4_1:58689934-58689953 None:intergenic 35.0%
GCATGAAATGTTGATCAACA+AGG + chr4_1:58690023-58690042 Msa0559500:intron 35.0%
! TGTCCACAGTGCAAATATTT+TGG + chr4_1:58690135-58690154 Msa0559500:intron 35.0%
!! CTGTGTGAGTTGATATAGAA+TGG + chr4_1:58690243-58690262 Msa0559500:three_prime_UTR 35.0%
GATATAGAATGGCATCTTCA+TGG + chr4_1:58690254-58690273 Msa0559500:three_prime_UTR 35.0%
!! AACTAGAAGATGCTTTGAGA+AGG + chr4_1:58690410-58690429 Msa0559500:three_prime_UTR 35.0%
! TATCTTTATTTGCTCGCCAT+GGG + chr4_1:58690469-58690488 Msa0559500:three_prime_UTR 35.0%
ATAAACAATGTTCCATCCCA+TGG - chr4_1:58690488-58690507 None:intergenic 35.0%
CCTTACTCATAAAACAGACA+TGG - chr4_1:58690686-58690705 None:intergenic 35.0%
! CCATGTCTGTTTTATGAGTA+AGG + chr4_1:58690683-58690702 Msa0559500:three_prime_UTR 35.0%
ATTCGACATGTTCATGTATG+TGG - chr4_1:58690774-58690793 None:intergenic 35.0%
TGTTTCTTAATAGCACATGG+TGG - chr4_1:58690804-58690823 None:intergenic 35.0%
! GGCTTTGTATAACTAGACAT+AGG + chr4_1:58690943-58690962 Msa0559500:three_prime_UTR 35.0%
AAATTGATGCATAATGGCAC+TGG + chr4_1:58690973-58690992 Msa0559500:three_prime_UTR 35.0%
! CTTTTTGATGAAGAAGCCAT+TGG - chr4_1:58691040-58691059 None:intergenic 35.0%
CAATGGCTTCTTCATCAAAA+AGG + chr4_1:58691038-58691057 Msa0559500:three_prime_UTR 35.0%
ATCTTCATGAACACTGCATT+CGG - chr4_1:58691315-58691334 None:intergenic 35.0%
! TTTTGGATCAACCTCATGAT+GGG + chr4_1:58691349-58691368 Msa0559500:three_prime_UTR 35.0%
CAATTCGGTTGTAATCGTAT+AGG + chr4_1:58691389-58691408 Msa0559500:three_prime_UTR 35.0%
!! TACGAAGATAACGGATCAAA+CGG - chr4_1:58691516-58691535 None:intergenic 35.0%
ATTGAGGAAACGTCATACTA+CGG - chr4_1:58691641-58691660 None:intergenic 35.0%
! AGAGTGTAAGGGTTTGGAAT+TGG - chr4_1:58682163-58682182 None:intergenic 40.0%
! GAAAAGAGAGTGTAAGGGTT+TGG - chr4_1:58682169-58682188 None:intergenic 40.0%
CCACATTGAGAATTTCATGC+CGG + chr4_1:58682303-58682322 Msa0559500:five_prime_UTR 40.0%
TAAAATCGCAAAATCACGGC+TGG - chr4_1:58682351-58682370 None:intergenic 40.0%
! GCCGTGATTTTGCGATTTTA+TGG + chr4_1:58682351-58682370 Msa0559500:exon 40.0%
CATCGAATCGTACACAAAGA+CGG + chr4_1:58682567-58682586 Msa0559500:CDS 40.0%
GAGTCTTAAGCTGACGAATT+TGG - chr4_1:58682633-58682652 None:intergenic 40.0%
AATCAGGTGAGTTTAAACCC+AGG + chr4_1:58682659-58682678 Msa0559500:CDS 40.0%
TTGCTCCCTGATTTCTTAGT+GGG - chr4_1:58682706-58682725 None:intergenic 40.0%
TAAGAAATCAGGGAGCAAGA+AGG + chr4_1:58682708-58682727 Msa0559500:CDS 40.0%
TTCAAAGCCGTTGCATTTAC+AGG - chr4_1:58682886-58682905 None:intergenic 40.0%
! TGCATTGACATACAATCCCA+AGG + chr4_1:58683032-58683051 Msa0559500:CDS 40.0%
! GCATTGACATACAATCCCAA+GGG + chr4_1:58683033-58683052 Msa0559500:CDS 40.0%
GCAGCTTCTTGAAAAATTCG+AGG + chr4_1:58683080-58683099 Msa0559500:CDS 40.0%
ACTACTTGTTCCATCTTCTC+TGG - chr4_1:58683474-58683493 None:intergenic 40.0%
AAGGAAGAGAAATGGGCATT+TGG + chr4_1:58683503-58683522 Msa0559500:CDS 40.0%
GGATGAGATTGAGCTTGATA+TGG + chr4_1:58683536-58683555 Msa0559500:CDS 40.0%
TGAGATTGAGCTTGATATGG+AGG + chr4_1:58683539-58683558 Msa0559500:CDS 40.0%
! TCGATCGATTGGTTACCAAT+TGG + chr4_1:58683589-58683608 Msa0559500:CDS 40.0%
! GCTCACCATCTTTTTCCAAT+TGG - chr4_1:58683607-58683626 None:intergenic 40.0%
AGATGGTGAGCAAGATTAAG+CGG + chr4_1:58683616-58683635 Msa0559500:CDS 40.0%
TGCCTTCAAACAAAGGCAAT+GGG + chr4_1:58683664-58683683 Msa0559500:CDS 40.0%
GCTGTCTAATGTAGCATTGT+TGG + chr4_1:58683729-58683748 Msa0559500:intron 40.0%
! TTCTGTTTCTTTCCCTCAGA+AGG - chr4_1:58683832-58683851 None:intergenic 40.0%
GAAGATAGATGCTGTTGATG+AGG + chr4_1:58683852-58683871 Msa0559500:CDS 40.0%
! GTTGATGAGGATGTTGACAT+CGG + chr4_1:58683865-58683884 Msa0559500:CDS 40.0%
TTGATGAGGATGTTGACATC+GGG + chr4_1:58683866-58683885 Msa0559500:CDS 40.0%
TTATCTTGCTCAATCTCCAC+AGG - chr4_1:58683919-58683938 None:intergenic 40.0%
GAGCAAGATAAAGATATGGG+TGG + chr4_1:58683928-58683947 Msa0559500:CDS 40.0%
GATAAAGATATGGGTGGTAC+TGG + chr4_1:58683934-58683953 Msa0559500:CDS 40.0%
GTACAAACCACAGCATTTAG+AGG - chr4_1:58684035-58684054 None:intergenic 40.0%
TTCATGCAGATTCGGATTCA+GGG + chr4_1:58684092-58684111 Msa0559500:intron 40.0%
ACATTTCTTGATCCGCTAAC+CGG - chr4_1:58684205-58684224 None:intergenic 40.0%
! TGTTTTGCAGATAGCATAGC+CGG + chr4_1:58684318-58684337 Msa0559500:intron 40.0%
!! ATTGACTGTTGGTTTCAGCT+TGG + chr4_1:58684391-58684410 Msa0559500:three_prime_UTR 40.0%
!! TTGACTGTTGGTTTCAGCTT+GGG + chr4_1:58684392-58684411 Msa0559500:three_prime_UTR 40.0%
TTGGGAATGGCTAATTGGAT+TGG + chr4_1:58684410-58684429 Msa0559500:three_prime_UTR 40.0%
TGGGAATGGCTAATTGGATT+GGG + chr4_1:58684411-58684430 Msa0559500:three_prime_UTR 40.0%
CAAAGTCACAACGCAAATCA+TGG - chr4_1:58684453-58684472 None:intergenic 40.0%
! CATGATTTGCGTTGTGACTT+TGG + chr4_1:58684451-58684470 Msa0559500:three_prime_UTR 40.0%
TACATACAACATGGAGAAGG+TGG - chr4_1:58684732-58684751 None:intergenic 40.0%
ATTCATCGCAGAAATTGTCG+AGG + chr4_1:58685179-58685198 Msa0559500:three_prime_UTR 40.0%
TTCATCGCAGAAATTGTCGA+GGG + chr4_1:58685180-58685199 Msa0559500:three_prime_UTR 40.0%
AAATTGAAACCTGCTCAGCT+CGG - chr4_1:58685279-58685298 None:intergenic 40.0%
AGCAGGTTTCAATTTGTCAC+TGG + chr4_1:58685284-58685303 Msa0559500:three_prime_UTR 40.0%
CACTGGAAAAAACCTAAAGC+TGG + chr4_1:58685301-58685320 Msa0559500:three_prime_UTR 40.0%
TGTTTGTCGAAACTCTGATG+TGG + chr4_1:58685476-58685495 Msa0559500:three_prime_UTR 40.0%
GCACCCTATAACAATAACAG+AGG - chr4_1:58685666-58685685 None:intergenic 40.0%
TAATGGAGCTACTGTATTGC+AGG + chr4_1:58685765-58685784 Msa0559500:three_prime_UTR 40.0%
! TTTCTTGCTGTCAAAGAAGG+TGG + chr4_1:58685792-58685811 Msa0559500:intron 40.0%
! TTCTTGCTGTCAAAGAAGGT+GGG + chr4_1:58685793-58685812 Msa0559500:intron 40.0%
! TGTCAAAGAAGGTGGGTTTA+GGG + chr4_1:58685800-58685819 Msa0559500:intron 40.0%
GTATATGCGGTACTAACTCA+AGG - chr4_1:58686559-58686578 None:intergenic 40.0%
GGTTGTCTGCTTCAAAACAA+AGG - chr4_1:58686607-58686626 None:intergenic 40.0%
CACAAGATAGAAATCGAGGT+TGG + chr4_1:58686828-58686847 Msa0559500:intron 40.0%
CAAGATAGAAATCGAGGTTG+GGG + chr4_1:58686830-58686849 Msa0559500:intron 40.0%
GATCAATCCTGACATTCTAC+AGG + chr4_1:58687316-58687335 Msa0559500:three_prime_UTR 40.0%
ATGAGTGCTATATTTCAGGG+TGG + chr4_1:58687434-58687453 Msa0559500:intron 40.0%
TGAGTGCTATATTTCAGGGT+GGG + chr4_1:58687435-58687454 Msa0559500:intron 40.0%
TCAAAAGACAACCTTACACG+GGG - chr4_1:58687504-58687523 None:intergenic 40.0%
TATATCAGTCAGCTGAGCAA+TGG - chr4_1:58687559-58687578 None:intergenic 40.0%
TGTGTACATCTAAAGGGTGA+TGG + chr4_1:58687687-58687706 Msa0559500:three_prime_UTR 40.0%
GTGTACATCTAAAGGGTGAT+GGG + chr4_1:58687688-58687707 Msa0559500:three_prime_UTR 40.0%
!! AAAGGGTGATGGGATTATTG+TGG + chr4_1:58687698-58687717 Msa0559500:three_prime_UTR 40.0%
TGTGGTAGTATGAGTTGTTG+AGG + chr4_1:58687716-58687735 Msa0559500:three_prime_UTR 40.0%
AAGGACAATAAGTGTGCTGT+TGG - chr4_1:58687965-58687984 None:intergenic 40.0%
CACGTTACGGATAACCAATT+TGG + chr4_1:58688138-58688157 Msa0559500:intron 40.0%
TCCCAGGCATAAAACCAAAT+TGG - chr4_1:58688155-58688174 None:intergenic 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG + chr4_1:58688154-58688173 Msa0559500:intron 40.0%
! GAGTACCTAGAGAGATTTTG+TGG + chr4_1:58688283-58688302 Msa0559500:intron 40.0%
GCTTTCCACAAAATCTCTCT+AGG - chr4_1:58688291-58688310 None:intergenic 40.0%
TGCCTATATTAGAGCTATCC+AGG + chr4_1:58688335-58688354 Msa0559500:intron 40.0%
AGCTATCCAGGATATGTATG+AGG + chr4_1:58688347-58688366 Msa0559500:intron 40.0%
GCTATCCAGGATATGTATGA+GGG + chr4_1:58688348-58688367 Msa0559500:intron 40.0%
TGGTGCAGTCCTATTGTTAT+GGG - chr4_1:58688420-58688439 None:intergenic 40.0%
TTGGTGCAGTCCTATTGTTA+TGG - chr4_1:58688421-58688440 None:intergenic 40.0%
ATAACAATAGGACTGCACCA+AGG + chr4_1:58688420-58688439 Msa0559500:intron 40.0%
TAACAATAGGACTGCACCAA+GGG + chr4_1:58688421-58688440 Msa0559500:intron 40.0%
TCTACCTTAGAGGTGAAAGT+TGG + chr4_1:58688681-58688700 Msa0559500:intron 40.0%
ATCTCCAACTTTCACCTCTA+AGG - chr4_1:58688688-58688707 None:intergenic 40.0%
GGGTCCATAGTACAAAATGA+CGG + chr4_1:58688744-58688763 Msa0559500:intron 40.0%
GTACATCATCGTATTCAAGC+TGG + chr4_1:58688783-58688802 Msa0559500:intron 40.0%
! AGGTGTTTTGTGCGATAAGA+AGG + chr4_1:58688830-58688849 Msa0559500:intron 40.0%
! AAGGTACCACTTAAGCTGAA+AGG + chr4_1:58688849-58688868 Msa0559500:intron 40.0%
GTGGTAAGACTAGACATGAT+AGG + chr4_1:58688991-58689010 Msa0559500:intron 40.0%
TGACATCATTAGAGAGAGAG+TGG + chr4_1:58689022-58689041 Msa0559500:intron 40.0%
GACATCATTAGAGAGAGAGT+GGG + chr4_1:58689023-58689042 Msa0559500:intron 40.0%
ACATCATTAGAGAGAGAGTG+GGG + chr4_1:58689024-58689043 Msa0559500:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + chr4_1:58689155-58689174 Msa0559500:intron 40.0%
! AAAGCCTTATCCCACTAAGT+GGG - chr4_1:58689296-58689315 None:intergenic 40.0%
TGAGAAAATCTACACCATGC+AGG + chr4_1:58689515-58689534 Msa0559500:three_prime_UTR 40.0%
GAGAAAATCTACACCATGCA+GGG + chr4_1:58689516-58689535 Msa0559500:three_prime_UTR 40.0%
AGAAAATCTACACCATGCAG+GGG + chr4_1:58689517-58689536 Msa0559500:three_prime_UTR 40.0%
!! GTTATATAGGTGTTGGACAC+CGG - chr4_1:58689921-58689940 None:intergenic 40.0%
CATGCTCAACCTTGAATCTA+CGG - chr4_1:58690008-58690027 None:intergenic 40.0%
AAATGTTGATCAACAAGGGG+TGG + chr4_1:58690028-58690047 Msa0559500:intron 40.0%
AATGTTGATCAACAAGGGGT+GGG + chr4_1:58690029-58690048 Msa0559500:intron 40.0%
GCATCTTCATGGGAACAATT+TGG + chr4_1:58690265-58690284 Msa0559500:three_prime_UTR 40.0%
! GCATCTTCTAGTTGTTCTAG+AGG - chr4_1:58690403-58690422 None:intergenic 40.0%
! CTATCTTTATTTGCTCGCCA+TGG + chr4_1:58690468-58690487 Msa0559500:three_prime_UTR 40.0%
AGTTCAATCCAAGCAGAAGA+TGG - chr4_1:58690921-58690940 None:intergenic 40.0%
TCTTCTGCTTGGATTGAACT+TGG + chr4_1:58690921-58690940 Msa0559500:three_prime_UTR 40.0%
CTTCTGCTTGGATTGAACTT+GGG + chr4_1:58690922-58690941 Msa0559500:three_prime_UTR 40.0%
TAGCTGTGCATTATCTCCAA+TGG + chr4_1:58691021-58691040 Msa0559500:three_prime_UTR 40.0%
TGCATTCGGTCATCTACAAT+TGG - chr4_1:58691301-58691320 None:intergenic 40.0%
!! GTTTTGGATCAACCTCATGA+TGG + chr4_1:58691348-58691367 Msa0559500:three_prime_UTR 40.0%
TTGAGGAAACGTCATACTAC+GGG - chr4_1:58691640-58691659 None:intergenic 40.0%
CAATGTTTGAATCAACCGTG+TGG + chr4_1:58691698-58691717 Msa0559500:three_prime_UTR 40.0%
GCTACCAATACTATCTCCGA+CGG + chr4_1:58682198-58682217 Msa0559500:five_prime_UTR 45.0%
! AAGCGCGTGAGTTTTCCAAA+CGG + chr4_1:58682221-58682240 Msa0559500:five_prime_UTR 45.0%
CCGGCATGAAATTCTCAATG+TGG - chr4_1:58682306-58682325 None:intergenic 45.0%
! CCAATTTGGTTCGTTACCGT+TGG - chr4_1:58682392-58682411 None:intergenic 45.0%
CCAACGGTAACGAACCAAAT+TGG + chr4_1:58682389-58682408 Msa0559500:CDS 45.0%
!! TTGAGGAAGCGTCATCTGAT+GGG - chr4_1:58682501-58682520 None:intergenic 45.0%
!! ATTGAGGAAGCGTCATCTGA+TGG - chr4_1:58682502-58682521 None:intergenic 45.0%
! GTTGGATCGTCGATTGATTG+AGG - chr4_1:58682518-58682537 None:intergenic 45.0%
AAACCCAGGCTAAACCACAA+CGG + chr4_1:58682673-58682692 Msa0559500:CDS 45.0%
GTGGTCCCACTAAGAAATCA+GGG + chr4_1:58682698-58682717 Msa0559500:CDS 45.0%
CTTGCTCCCTGATTTCTTAG+TGG - chr4_1:58682707-58682726 None:intergenic 45.0%
! AGGAAAAGGTCGTTTGTTGC+CGG - chr4_1:58682737-58682756 None:intergenic 45.0%
! CAACAAACGACCTTTTCCTG+CGG + chr4_1:58682738-58682757 Msa0559500:CDS 45.0%
ACATCAGCAGCAAAATCCGA+CGG - chr4_1:58682994-58683013 None:intergenic 45.0%
GTGTTAACATCATGGCCCTT+GGG - chr4_1:58683051-58683070 None:intergenic 45.0%
AGTGTTAACATCATGGCCCT+TGG - chr4_1:58683052-58683071 None:intergenic 45.0%
! ATGAATTACAGGCTAGCTCG+TGG + chr4_1:58683151-58683170 Msa0559500:CDS 45.0%
GAACCATGTTGAACCAGAGA+GGG + chr4_1:58683173-58683192 Msa0559500:CDS 45.0%
! TTTCCCTCTCTGGTTCAACA+TGG - chr4_1:58683179-58683198 None:intergenic 45.0%
ATGTTGAACCAGAGAGGGAA+AGG + chr4_1:58683178-58683197 Msa0559500:CDS 45.0%
TGTTGAACCAGAGAGGGAAA+GGG + chr4_1:58683179-58683198 Msa0559500:CDS 45.0%
!!! TCTTGGTGTTTTGCTACTGG+TGG - chr4_1:58683243-58683262 None:intergenic 45.0%
!! TTAGAAGTACTAGCAGGCTC+AGG - chr4_1:58683273-58683292 None:intergenic 45.0%
AACTGGTGACTGAGCTAATG+GGG - chr4_1:58683316-58683335 None:intergenic 45.0%
GAACTGGTGACTGAGCTAAT+GGG - chr4_1:58683317-58683336 None:intergenic 45.0%
! TTATTTGGATCCCTGGCCTT+TGG - chr4_1:58683393-58683412 None:intergenic 45.0%
! TTCCCTCTTATTTGGATCCC+TGG - chr4_1:58683400-58683419 None:intergenic 45.0%
! GATTTTGCCACCAGAGAAGA+TGG + chr4_1:58683461-58683480 Msa0559500:CDS 45.0%
ACTTGTTCCATCTTCTCTGG+TGG - chr4_1:58683471-58683490 None:intergenic 45.0%
! AATGGGCATTTGGAGCAAGA+TGG + chr4_1:58683513-58683532 Msa0559500:CDS 45.0%
! ATGGGCATTTGGAGCAAGAT+GGG + chr4_1:58683514-58683533 Msa0559500:CDS 45.0%
TGATATGGAGGCTGTTGACA+CGG + chr4_1:58683551-58683570 Msa0559500:CDS 45.0%
GTGCCTTCAAACAAAGGCAA+TGG + chr4_1:58683663-58683682 Msa0559500:CDS 45.0%
GCCTTCAAACAAAGGCAATG+GGG + chr4_1:58683665-58683684 Msa0559500:CDS 45.0%
! ACCCCATTGCCTTTGTTTGA+AGG - chr4_1:58683669-58683688 None:intergenic 45.0%
TTTCTTTCCCTCAGAAGGAG+GGG - chr4_1:58683827-58683846 None:intergenic 45.0%
GTTTCTTTCCCTCAGAAGGA+GGG - chr4_1:58683828-58683847 None:intergenic 45.0%
TGTTTCTTTCCCTCAGAAGG+AGG - chr4_1:58683829-58683848 None:intergenic 45.0%
TGATGAGGATGTTGACATCG+GGG + chr4_1:58683867-58683886 Msa0559500:CDS 45.0%
! AAAGATATGGGTGGTACTGG+TGG + chr4_1:58683937-58683956 Msa0559500:CDS 45.0%
CCACAGCATTTAGAGGAAAG+AGG - chr4_1:58684028-58684047 None:intergenic 45.0%
CCTCTTTCCTCTAAATGCTG+TGG + chr4_1:58684025-58684044 Msa0559500:intron 45.0%
CTTCATGCAGATTCGGATTC+AGG + chr4_1:58684091-58684110 Msa0559500:intron 45.0%
!! TCAGGAAGTGATTCTGAAGC+TGG + chr4_1:58684121-58684140 Msa0559500:CDS 45.0%
!! AGTGATTCTGAAGCTGGCAA+TGG + chr4_1:58684127-58684146 Msa0559500:CDS 45.0%
TGGCAATGGTCATTTGTAGC+AGG + chr4_1:58684141-58684160 Msa0559500:exon 45.0%
GGCAATGGTCATTTGTAGCA+GGG + chr4_1:58684142-58684161 Msa0559500:exon 45.0%
GCTATAGTGCTTGCATGTGT+TGG + chr4_1:58684235-58684254 Msa0559500:three_prime_UTR 45.0%
! GGGTTGTAGACATTGACTGT+TGG + chr4_1:58684380-58684399 Msa0559500:three_prime_UTR 45.0%
!! TGTTGGTTTCAGCTTGGGAA+TGG + chr4_1:58684397-58684416 Msa0559500:three_prime_UTR 45.0%
TCAGCTTGGGAATGGCTAAT+TGG + chr4_1:58684405-58684424 Msa0559500:three_prime_UTR 45.0%
CACAACGCAAATCATGGATC+AGG - chr4_1:58684447-58684466 None:intergenic 45.0%
CCTCCCTGATACATACAACA+TGG - chr4_1:58684741-58684760 None:intergenic 45.0%
CCATGTTGTATGTATCAGGG+AGG + chr4_1:58684738-58684757 Msa0559500:three_prime_UTR 45.0%
TCATCGCAGAAATTGTCGAG+GGG + chr4_1:58685181-58685200 Msa0559500:three_prime_UTR 45.0%
TGGTTGCTGTGTTCGTTGTT+TGG + chr4_1:58685321-58685340 Msa0559500:three_prime_UTR 45.0%
CGAAACTCTGATGTGGTTCA+TGG + chr4_1:58685483-58685502 Msa0559500:three_prime_UTR 45.0%
TGGTTCATGGTAGAGAGACA+TGG + chr4_1:58685496-58685515 Msa0559500:three_prime_UTR 45.0%
TTCATGGTAGAGAGACATGG+AGG + chr4_1:58685499-58685518 Msa0559500:three_prime_UTR 45.0%
! CTGTCAAAGAAGGTGGGTTT+AGG + chr4_1:58685799-58685818 Msa0559500:intron 45.0%
! AAGAAGGTGGGTTTAGGGAT+TGG + chr4_1:58685805-58685824 Msa0559500:intron 45.0%
! AGAAGGTGGGTTTAGGGATT+GGG + chr4_1:58685806-58685825 Msa0559500:intron 45.0%
! TATTTCAGGGTGGGCTTTGA+TGG + chr4_1:58687444-58687463 Msa0559500:intron 45.0%
TTGATGGAGTTGAGACATCC+AGG + chr4_1:58687460-58687479 Msa0559500:three_prime_UTR 45.0%
CTGACTGATATAGCTGACGA+TGG + chr4_1:58687567-58687586 Msa0559500:three_prime_UTR 45.0%
TGAATATGACTGTGGTTGGG+TGG + chr4_1:58687626-58687645 Msa0559500:three_prime_UTR 45.0%
TGGGTGGTTGATTGAATTGC+AGG + chr4_1:58687642-58687661 Msa0559500:three_prime_UTR 45.0%
GGGTGGTTGATTGAATTGCA+GGG + chr4_1:58687643-58687662 Msa0559500:three_prime_UTR 45.0%
! AGAGATTTTGTGGAAAGCCC+TGG + chr4_1:58688293-58688312 Msa0559500:intron 45.0%
!! TACATCTCGGTGCTAACTCT+TGG - chr4_1:58688503-58688522 None:intergenic 45.0%
! GCAGATGATGTAGTCTTGCT+TGG + chr4_1:58688531-58688550 Msa0559500:intron 45.0%
AGTCGAGGGAGGAGTTAAAT+GGG + chr4_1:58688556-58688575 Msa0559500:intron 45.0%
TAAATGGGAGGCTAGAGACT+TGG + chr4_1:58688571-58688590 Msa0559500:intron 45.0%
!! ACTCCGTCTTGTTTCTACTC+AGG - chr4_1:58688626-58688645 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG + chr4_1:58688787-58688806 Msa0559500:intron 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG + chr4_1:58688796-58688815 Msa0559500:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG + chr4_1:58688810-58688829 Msa0559500:intron 45.0%
CTTATCGCACAAAACACCTG+AGG - chr4_1:58688829-58688848 None:intergenic 45.0%
ACCGGCAATGTTGTATGGTA+CGG + chr4_1:58688896-58688915 Msa0559500:intron 45.0%
TCCGTACCATACAACATTGC+CGG - chr4_1:58688900-58688919 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG + chr4_1:58688904-58688923 Msa0559500:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG + chr4_1:58688905-58688924 Msa0559500:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG - chr4_1:58688941-58688960 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG + chr4_1:58688944-58688963 Msa0559500:intron 45.0%
CATCATTAGAGAGAGAGTGG+GGG + chr4_1:58689025-58689044 Msa0559500:intron 45.0%
AGATCAAATGGAGGAGAGTC+AGG + chr4_1:58689139-58689158 Msa0559500:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + chr4_1:58689149-58689168 Msa0559500:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr4_1:58689295-58689314 None:intergenic 45.0%
! CAAAGCCTTATCCCACTAAG+TGG - chr4_1:58689297-58689316 None:intergenic 45.0%
CACTTAGTGGGATAAGGCTT+TGG + chr4_1:58689295-58689314 Msa0559500:intron 45.0%
!! CTTTGAAATCATCCCCTGCA+TGG - chr4_1:58689532-58689551 None:intergenic 45.0%
CATGCAGGGGATGATTTCAA+AGG + chr4_1:58689530-58689549 Msa0559500:three_prime_UTR 45.0%
! GCACAAACACCTTTTGGACT+TGG + chr4_1:58689735-58689754 Msa0559500:intron 45.0%
ACGTGTCGTACGAATGTCAT+AGG - chr4_1:58689801-58689820 None:intergenic 45.0%
TTCCACACACCGTAGATTCA+AGG + chr4_1:58689996-58690015 Msa0559500:intron 45.0%
AACCTTGAATCTACGGTGTG+TGG - chr4_1:58690001-58690020 None:intergenic 45.0%
ATGTTGATCAACAAGGGGTG+GGG + chr4_1:58690030-58690049 Msa0559500:intron 45.0%
!! TAGTTGTTCTAGAGGCTCTC+GGG - chr4_1:58690395-58690414 None:intergenic 45.0%
!! CTAGTTGTTCTAGAGGCTCT+CGG - chr4_1:58690396-58690415 None:intergenic 45.0%
TTTATTTGCTCGCCATGGGA+TGG + chr4_1:58690473-58690492 Msa0559500:three_prime_UTR 45.0%
TAGAGGTTCCATCTTCTGCT+TGG + chr4_1:58690910-58690929 Msa0559500:three_prime_UTR 45.0%
! GATCAACCTCATGATGGGAT+AGG + chr4_1:58691354-58691373 Msa0559500:three_prime_UTR 45.0%
GTCTATCCTATCCCATCATG+AGG - chr4_1:58691363-58691382 None:intergenic 45.0%
TGATGGGATAGGATAGACCA+CGG + chr4_1:58691365-58691384 Msa0559500:three_prime_UTR 45.0%
AGGATAGACCACGGACAATT+CGG + chr4_1:58691374-58691393 Msa0559500:three_prime_UTR 45.0%
GATTACAACCGAATTGTCCG+TGG - chr4_1:58691385-58691404 None:intergenic 45.0%
TGTTTGAATCAACCGTGTGG+TGG + chr4_1:58691701-58691720 Msa0559500:three_prime_UTR 45.0%
ATGTCTGATGTTCCACCACA+CGG - chr4_1:58691716-58691735 None:intergenic 45.0%
GCTTCCGTCGGAGATAGTAT+TGG - chr4_1:58682205-58682224 None:intergenic 50.0%
! AGTTTTCCAAACGGCGCGTA+GGG + chr4_1:58682230-58682249 Msa0559500:five_prime_UTR 50.0%
ATAAACCAACGATCACGCGC+AGG - chr4_1:58682262-58682281 None:intergenic 50.0%
ATTTCATGCCGGAGATACGC+CGG + chr4_1:58682314-58682333 Msa0559500:five_prime_UTR 50.0%
! GCATCGGCGTTATTAGCCAA+CGG + chr4_1:58682373-58682392 Msa0559500:CDS 50.0%
CCTCTGTGTTGCAGCCAATT+TGG - chr4_1:58682406-58682425 None:intergenic 50.0%
CCAAATTGGCTGCAACACAG+AGG + chr4_1:58682403-58682422 Msa0559500:CDS 50.0%
AATTGGCTGCAACACAGAGG+CGG + chr4_1:58682406-58682425 Msa0559500:CDS 50.0%
!! TGAGGAAGCGTCATCTGATG+GGG - chr4_1:58682500-58682519 None:intergenic 50.0%
GGTGGTCCCACTAAGAAATC+AGG + chr4_1:58682697-58682716 Msa0559500:CDS 50.0%
TCAGGGAGCAAGAAGGTTTC+CGG + chr4_1:58682715-58682734 Msa0559500:CDS 50.0%
AATTCCCTCACCGCAGGAAA+AGG - chr4_1:58682751-58682770 None:intergenic 50.0%
TTCTTCAATTCCCTCACCGC+AGG - chr4_1:58682757-58682776 None:intergenic 50.0%
AGAGATTGGGGATGCGATGA+AGG + chr4_1:58682786-58682805 Msa0559500:CDS 50.0%
TTGACAGTGCCCAGATCCAT+AGG - chr4_1:58682940-58682959 None:intergenic 50.0%
CGGCGTAGAGTAAGCATTCT+TGG - chr4_1:58682974-58682993 None:intergenic 50.0%
GAATGCTTACTCTACGCCGT+CGG + chr4_1:58682975-58682994 Msa0559500:CDS 50.0%
GGGCCATGATGTTAACACTG+CGG + chr4_1:58683053-58683072 Msa0559500:CDS 50.0%
TCGCCGCAGTGTTAACATCA+TGG - chr4_1:58683059-58683078 None:intergenic 50.0%
GGAACCATGTTGAACCAGAG+AGG + chr4_1:58683172-58683191 Msa0559500:CDS 50.0%
ACTGGTGGAGGGATTGGAAT+TGG - chr4_1:58683228-58683247 None:intergenic 50.0%
TTTGCTACTGGTGGAGGGAT+TGG - chr4_1:58683234-58683253 None:intergenic 50.0%
! GGTGTTTTGCTACTGGTGGA+GGG - chr4_1:58683239-58683258 None:intergenic 50.0%
! TGGTGTTTTGCTACTGGTGG+AGG - chr4_1:58683240-58683259 None:intergenic 50.0%
!!! GGCTCTTGGTGTTTTGCTAC+TGG - chr4_1:58683246-58683265 None:intergenic 50.0%
!! GGCTGGTTAGAAGTACTAGC+AGG - chr4_1:58683279-58683298 None:intergenic 50.0%
! AATGGGGGATTCGAAGTGCT+TGG - chr4_1:58683300-58683319 None:intergenic 50.0%
ACTGGTGACTGAGCTAATGG+GGG - chr4_1:58683315-58683334 None:intergenic 50.0%
CGAACTGGTGACTGAGCTAA+TGG - chr4_1:58683318-58683337 None:intergenic 50.0%
! TCACTTGAAGTGCTCGCGTT+GGG - chr4_1:58683350-58683369 None:intergenic 50.0%
! TTCACTTGAAGTGCTCGCGT+TGG - chr4_1:58683351-58683370 None:intergenic 50.0%
!! TTTGGCTTGGGCTGCTTCAA+GGG - chr4_1:58683375-58683394 None:intergenic 50.0%
AGGCCAGGGATCCAAATAAG+AGG + chr4_1:58683394-58683413 Msa0559500:CDS 50.0%
GGCCAGGGATCCAAATAAGA+GGG + chr4_1:58683395-58683414 Msa0559500:CDS 50.0%
! TGGGCATTTGGAGCAAGATG+GGG + chr4_1:58683515-58683534 Msa0559500:CDS 50.0%
TGTTGACACGGAGACTCTCT+GGG + chr4_1:58683563-58683582 Msa0559500:CDS 50.0%
! TCTCTGGGAACTCGATCGAT+TGG + chr4_1:58683578-58683597 Msa0559500:CDS 50.0%
GGAATTGCCTGATAGGGAGA+AGG + chr4_1:58683792-58683811 Msa0559500:intron 50.0%
GCATCAACCTTCTCCCTATC+AGG - chr4_1:58683802-58683821 None:intergenic 50.0%
ACAGGTGGGAAATCGTTTGC+TGG - chr4_1:58683901-58683920 None:intergenic 50.0%
AGCAAACGATTTCCCACCTG+TGG + chr4_1:58683900-58683919 Msa0559500:CDS 50.0%
CTTGCTCAATCTCCACAGGT+GGG - chr4_1:58683915-58683934 None:intergenic 50.0%
TCTTGCTCAATCTCCACAGG+TGG - chr4_1:58683916-58683935 None:intergenic 50.0%
CACTGGAACTACTACTGGCA+CGG - chr4_1:58683963-58683982 None:intergenic 50.0%
GGAACCACTGGAACTACTAC+TGG - chr4_1:58683968-58683987 None:intergenic 50.0%
AGAGGTTATACCACTCGACG+AGG - chr4_1:58684010-58684029 None:intergenic 50.0%
TCGGATTCAGGGAGTTCTTC+AGG + chr4_1:58684103-58684122 Msa0559500:CDS 50.0%
ATGGTCATTTGTAGCAGGGC+AGG + chr4_1:58684146-58684165 Msa0559500:exon 50.0%
TGGTCATTTGTAGCAGGGCA+GGG + chr4_1:58684147-58684166 Msa0559500:exon 50.0%
! GGCAGGGCTTTTGGTACTAA+TGG + chr4_1:58684163-58684182 Msa0559500:three_prime_UTR 50.0%
!! CTAACCGGAGTTGGTCTTTG+GGG - chr4_1:58684190-58684209 None:intergenic 50.0%
!! GCTAACCGGAGTTGGTCTTT+GGG - chr4_1:58684191-58684210 None:intergenic 50.0%
CAAAGACCAACTCCGGTTAG+CGG + chr4_1:58684190-58684209 Msa0559500:three_prime_UTR 50.0%
!! AGTGCTTGCATGTGTTGGCT+AGG + chr4_1:58684240-58684259 Msa0559500:three_prime_UTR 50.0%
CGAACACAGCAACCAGCTTT+AGG - chr4_1:58685316-58685335 None:intergenic 50.0%
TCCAGGACTGTTCCCAAACT+TGG + chr4_1:58687477-58687496 Msa0559500:three_prime_UTR 50.0%
ACCAAGTTTGGGAACAGTCC+TGG - chr4_1:58687481-58687500 None:intergenic 50.0%
CTTACACGGGGACCAAGTTT+GGG - chr4_1:58687492-58687511 None:intergenic 50.0%
CTACTTACTTCGACGCGTGA+TGG + chr4_1:58688194-58688213 Msa0559500:intron 50.0%
TGGAAAGCCCTGGAGAAGAA+AGG + chr4_1:58688303-58688322 Msa0559500:intron 50.0%
GGAAAGCCCTGGAGAAGAAA+GGG + chr4_1:58688304-58688323 Msa0559500:intron 50.0%
GAAAGCCCTGGAGAAGAAAG+GGG + chr4_1:58688305-58688324 Msa0559500:intron 50.0%
AAGCGCCCTCATACATATCC+TGG - chr4_1:58688356-58688375 None:intergenic 50.0%
AAGGACTTAGGGTTGACCCT+TGG - chr4_1:58688440-58688459 None:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG + chr4_1:58688541-58688560 Msa0559500:intron 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG + chr4_1:58688542-58688561 Msa0559500:intron 50.0%
GAGTCGAGGGAGGAGTTAAA+TGG + chr4_1:58688555-58688574 Msa0559500:intron 50.0%
! AGGCAAGCCTTAGAAGCGTA+TGG + chr4_1:58688594-58688613 Msa0559500:intron 50.0%
GCGGAAACCATACGCTTCTA+AGG - chr4_1:58688604-58688623 None:intergenic 50.0%
!! CCGTCTTGTTTCTACTCAGG+CGG - chr4_1:58688623-58688642 None:intergenic 50.0%
CCGCCTGAGTAGAAACAAGA+CGG + chr4_1:58688620-58688639 Msa0559500:intron 50.0%
GAGAAGTGGGTCTACCTTAG+AGG + chr4_1:58688671-58688690 Msa0559500:intron 50.0%
GTCAGACCGGCAATGTTGTA+TGG + chr4_1:58688891-58688910 Msa0559500:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG + chr4_1:58688952-58688971 Msa0559500:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG + chr4_1:58688972-58688991 Msa0559500:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr4_1:58689291-58689310 None:intergenic 50.0%
CACTGCACTGCAACAACACA+TGG - chr4_1:58689443-58689462 None:intergenic 50.0%
GACATTCGTACGACACGTGT+CGG + chr4_1:58689803-58689822 Msa0559500:intron 50.0%
!! ATGCATAATGGCACTGGCCT+TGG + chr4_1:58690979-58690998 Msa0559500:three_prime_UTR 50.0%
AATAAACGGTCCCGTTGCCA+AGG - chr4_1:58690999-58691018 None:intergenic 50.0%
GAAAACTCACGCGCTTCCGT+CGG - chr4_1:58682217-58682236 None:intergenic 55.0%
! GAGTTTTCCAAACGGCGCGT+AGG + chr4_1:58682229-58682248 Msa0559500:five_prime_UTR 55.0%
ATCGCAAAATCACGGCTGGC+CGG - chr4_1:58682347-58682366 None:intergenic 55.0%
AGGCGGTGGAGCTGAATTCA+TGG + chr4_1:58682423-58682442 Msa0559500:CDS 55.0%
GGCGGTGGAGCTGAATTCAT+GGG + chr4_1:58682424-58682443 Msa0559500:CDS 55.0%
CCACCGTTGTGGTTTAGCCT+GGG - chr4_1:58682679-58682698 None:intergenic 55.0%
ACCACCGTTGTGGTTTAGCC+TGG - chr4_1:58682680-58682699 None:intergenic 55.0%
AGGCTAAACCACAACGGTGG+TGG + chr4_1:58682679-58682698 Msa0559500:CDS 55.0%
! AACGACCTTTTCCTGCGGTG+AGG + chr4_1:58682743-58682762 Msa0559500:CDS 55.0%
! ACGACCTTTTCCTGCGGTGA+GGG + chr4_1:58682744-58682763 Msa0559500:CDS 55.0%
AACCAGAGAGGGAAAGGGAG+AGG + chr4_1:58683184-58683203 Msa0559500:CDS 55.0%
ACCAGAGAGGGAAAGGGAGA+GGG + chr4_1:58683185-58683204 Msa0559500:CDS 55.0%
! CACTTGAAGTGCTCGCGTTG+GGG - chr4_1:58683349-58683368 None:intergenic 55.0%
!! CTTTGGCTTGGGCTGCTTCA+AGG - chr4_1:58683376-58683395 None:intergenic 55.0%
CTTGAAGCAGCCCAAGCCAA+AGG + chr4_1:58683374-58683393 Msa0559500:CDS 55.0%
CTGTTGACACGGAGACTCTC+TGG + chr4_1:58683562-58683581 Msa0559500:CDS 55.0%
GGTGAGCAAGATTAAGCGGC+AGG + chr4_1:58683620-58683639 Msa0559500:CDS 55.0%
GATTAAGCGGCAGGCGCTAA+TGG + chr4_1:58683629-58683648 Msa0559500:CDS 55.0%
TGATGCAACCCCTCCTTCTG+AGG + chr4_1:58683816-58683835 Msa0559500:CDS 55.0%
GATGCAACCCCTCCTTCTGA+GGG + chr4_1:58683817-58683836 Msa0559500:CDS 55.0%
CGTGCCAGTAGTAGTTCCAG+TGG + chr4_1:58683961-58683980 Msa0559500:CDS 55.0%
! TTGTAGCAGGGCAGGGCTTT+TGG + chr4_1:58684154-58684173 Msa0559500:exon 55.0%
TGGTCCCCAAAGACCAACTC+CGG + chr4_1:58684183-58684202 Msa0559500:three_prime_UTR 55.0%
!! CGCTAACCGGAGTTGGTCTT+TGG - chr4_1:58684192-58684211 None:intergenic 55.0%
CTTGATCCGCTAACCGGAGT+TGG - chr4_1:58684199-58684218 None:intergenic 55.0%
TCGCAGAAATTGTCGAGGGG+AGG + chr4_1:58685184-58685203 Msa0559500:three_prime_UTR 55.0%
CGCAGAAATTGTCGAGGGGA+GGG + chr4_1:58685185-58685204 Msa0559500:three_prime_UTR 55.0%
GTTTGTGATCCGAGCTGAGC+AGG + chr4_1:58685267-58685286 Msa0559500:three_prime_UTR 55.0%
CCTTACACGGGGACCAAGTT+TGG - chr4_1:58687493-58687512 None:intergenic 55.0%
CCAAACTTGGTCCCCGTGTA+AGG + chr4_1:58687490-58687509 Msa0559500:three_prime_UTR 55.0%
TATGCCTGGGAGGTCGACTA+TGG + chr4_1:58688164-58688183 Msa0559500:intron 55.0%
! GACGCGTGATGGAGCGATAT+CGG + chr4_1:58688205-58688224 Msa0559500:intron 55.0%
! CGTGATGGAGCGATATCGGA+CGG + chr4_1:58688209-58688228 Msa0559500:intron 55.0%
CCTCACCCCTTTCTTCTCCA+GGG - chr4_1:58688313-58688332 None:intergenic 55.0%
TCCTCACCCCTTTCTTCTCC+AGG - chr4_1:58688314-58688333 None:intergenic 55.0%
TTCGACTAGTGTGAGGACGC+AGG + chr4_1:58688374-58688393 Msa0559500:intron 55.0%
ACTAGTGTGAGGACGCAGGA+TGG + chr4_1:58688378-58688397 Msa0559500:intron 55.0%
CTAGTGTGAGGACGCAGGAT+GGG + chr4_1:58688379-58688398 Msa0559500:intron 55.0%
TAGTGTGAGGACGCAGGATG+GGG + chr4_1:58688380-58688399 Msa0559500:intron 55.0%
CGAGGGAGGAGTTAAATGGG+AGG + chr4_1:58688559-58688578 Msa0559500:intron 55.0%
ATGGGAGGCTAGAGACTTGG+AGG + chr4_1:58688574-58688593 Msa0559500:intron 55.0%
CTATCGGACAGCAGTCAGAC+CGG + chr4_1:58688878-58688897 Msa0559500:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG + chr4_1:58688908-58688927 Msa0559500:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG + chr4_1:58688964-58688983 Msa0559500:intron 55.0%
CTTCTTACCACGGCGTCTAC+TGG - chr4_1:58689116-58689135 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr4_1:58689283-58689302 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr4_1:58689282-58689301 Msa0559500:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr4_1:58689283-58689302 Msa0559500:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr4_1:58689289-58689308 Msa0559500:intron 55.0%
! CTTTTGGACTTGGCGTGTCG+CGG + chr4_1:58689745-58689764 Msa0559500:intron 55.0%
! CTAACACGCGTCGATGTCTG+CGG + chr4_1:58689771-58689790 Msa0559500:intron 55.0%
CTAGAGGCTCTCGGGTTTCA+GGG - chr4_1:58690387-58690406 None:intergenic 55.0%
TCTAGAGGCTCTCGGGTTTC+AGG - chr4_1:58690388-58690407 None:intergenic 55.0%
!! AATGGCACTGGCCTTGGCAA+CGG + chr4_1:58690985-58691004 Msa0559500:three_prime_UTR 55.0%
TGGAATCCCTACGCGCCGTT+TGG - chr4_1:58682239-58682258 None:intergenic 60.0%
TTCCACCTGCGCGTGATCGT+TGG + chr4_1:58682254-58682273 Msa0559500:five_prime_UTR 60.0%
AACCAACGATCACGCGCAGG+TGG - chr4_1:58682259-58682278 None:intergenic 60.0%
GTGAGACTCCGGCGTATCTC+CGG - chr4_1:58682325-58682344 None:intergenic 60.0%
GAGATACGCCGGAGTCTCAC+CGG + chr4_1:58682325-58682344 Msa0559500:five_prime_UTR 60.0%
CCCAGGCTAAACCACAACGG+TGG + chr4_1:58682676-58682695 Msa0559500:CDS 60.0%
TAGTGGGACCACCACCGTTG+TGG - chr4_1:58682690-58682709 None:intergenic 60.0%
GGGGATGCGATGAAGGCTTG+TGG + chr4_1:58682793-58682812 Msa0559500:CDS 60.0%
ACCCTCTCCCTTTCCCTCTC+TGG - chr4_1:58683189-58683208 None:intergenic 60.0%
GTACTAGCAGGCTCAGGCAG+TGG - chr4_1:58683267-58683286 None:intergenic 60.0%
! GGGGATTCGAAGTGCTTGGC+TGG - chr4_1:58683296-58683315 None:intergenic 60.0%
! GTTGGGGAGGGTATGCGAAC+TGG - chr4_1:58683333-58683352 None:intergenic 60.0%
! TGAAGTGCTCGCGTTGGGGA+GGG - chr4_1:58683345-58683364 None:intergenic 60.0%
! TTGAAGTGCTCGCGTTGGGG+AGG - chr4_1:58683346-58683365 None:intergenic 60.0%
! GGATCCCTGGCCTTTGGCTT+GGG - chr4_1:58683387-58683406 None:intergenic 60.0%
! TGGATCCCTGGCCTTTGGCT+TGG - chr4_1:58683388-58683407 None:intergenic 60.0%
TCCAGTGGTTCCAGCAGCTC+TGG + chr4_1:58683976-58683995 Msa0559500:CDS 60.0%
CCAGTGGTTCCAGCAGCTCT+GGG + chr4_1:58683977-58683996 Msa0559500:CDS 60.0%
GGAATCACTCCCAGAGCTGC+TGG - chr4_1:58683989-58684008 None:intergenic 60.0%
GGGAGTGATTCCTCGTCGAG+TGG + chr4_1:58683997-58684016 Msa0559500:CDS 60.0%
GCTTCCATAGTCGACCTCCC+AGG - chr4_1:58688171-58688190 None:intergenic 60.0%
CCCTGGAGAAGAAAGGGGTG+AGG + chr4_1:58688310-58688329 Msa0559500:intron 60.0%
! AGGGCGCTTCGACTAGTGTG+AGG + chr4_1:58688367-58688386 Msa0559500:intron 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG + chr4_1:58688545-58688564 Msa0559500:intron 60.0%
GAGAAGACCAGTAGACGCCG+TGG + chr4_1:58689106-58689125 Msa0559500:intron 60.0%
CGCGACACGCCAAGTCCAAA+AGG - chr4_1:58689747-58689766 None:intergenic 60.0%
!! ATGGCACTGGCCTTGGCAAC+GGG + chr4_1:58690986-58691005 Msa0559500:three_prime_UTR 60.0%
TGGCTGCAACACAGAGGCGG+TGG + chr4_1:58682409-58682428 Msa0559500:CDS 65.0%
CAGGCTCAGGCAGTGGCTCT+TGG - chr4_1:58683260-58683279 None:intergenic 65.0%
AGCAGCCCAAGCCAAAGGCC+AGG + chr4_1:58683379-58683398 Msa0559500:CDS 65.0%
GCAGCCCAAGCCAAAGGCCA+GGG + chr4_1:58683380-58683399 Msa0559500:CDS 65.0%
CCCAGAGCTGCTGGAACCAC+TGG - chr4_1:58683980-58683999 None:intergenic 65.0%
! ACGGCTGGCCGGTGAGACTC+CGG - chr4_1:58682336-58682355 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 58682143 58691753 58682143 ID=Msa0559500;Name=Msa0559500
chr4_1 mRNA 58682143 58691753 58682143 ID=Msa0559500-mRNA-1;Parent=Msa0559500;Name=Msa0559500-mRNA-1;_AED=0.23;_eAED=0.23;_QI=227|1|1|1|0.27|0.25|12|3789|533
chr4_1 exon 58682143 58683686 58682143 ID=Msa0559500-mRNA-1:exon:17954;Parent=Msa0559500-mRNA-1
chr4_1 exon 58683793 58684018 58683793 ID=Msa0559500-mRNA-1:exon:17955;Parent=Msa0559500-mRNA-1
chr4_1 exon 58684101 58684261 58684101 ID=Msa0559500-mRNA-1:exon:17956;Parent=Msa0559500-mRNA-1
chr4_1 exon 58684380 58685589 58684380 ID=Msa0559500-mRNA-1:exon:17957;Parent=Msa0559500-mRNA-1
chr4_1 exon 58685681 58685786 58685681 ID=Msa0559500-mRNA-1:exon:17958;Parent=Msa0559500-mRNA-1
chr4_1 exon 58685898 58685964 58685898 ID=Msa0559500-mRNA-1:exon:17959;Parent=Msa0559500-mRNA-1
chr4_1 exon 58686067 58686112 58686067 ID=Msa0559500-mRNA-1:exon:17960;Parent=Msa0559500-mRNA-1
chr4_1 exon 58687273 58687357 58687273 ID=Msa0559500-mRNA-1:exon:17961;Parent=Msa0559500-mRNA-1
chr4_1 exon 58687452 58688093 58687452 ID=Msa0559500-mRNA-1:exon:17962;Parent=Msa0559500-mRNA-1
chr4_1 exon 58689325 58689585 58689325 ID=Msa0559500-mRNA-1:exon:17963;Parent=Msa0559500-mRNA-1
chr4_1 exon 58690236 58691059 58690236 ID=Msa0559500-mRNA-1:exon:17964;Parent=Msa0559500-mRNA-1
chr4_1 exon 58691308 58691753 58691308 ID=Msa0559500-mRNA-1:exon:17965;Parent=Msa0559500-mRNA-1
chr4_1 five_prime_UTR 58682143 58682369 58682143 ID=Msa0559500-mRNA-1:five_prime_utr;Parent=Msa0559500-mRNA-1
chr4_1 CDS 58682370 58683686 58682370 ID=Msa0559500-mRNA-1:cds;Parent=Msa0559500-mRNA-1
chr4_1 CDS 58683793 58684018 58683793 ID=Msa0559500-mRNA-1:cds;Parent=Msa0559500-mRNA-1
chr4_1 CDS 58684101 58684159 58684101 ID=Msa0559500-mRNA-1:cds;Parent=Msa0559500-mRNA-1
chr4_1 three_prime_UTR 58684160 58684261 58684160 ID=Msa0559500-mRNA-1:three_prime_utr;Parent=Msa0559500-mRNA-1
chr4_1 three_prime_UTR 58684380 58685589 58684380 ID=Msa0559500-mRNA-1:three_prime_utr;Parent=Msa0559500-mRNA-1
chr4_1 three_prime_UTR 58685681 58685786 58685681 ID=Msa0559500-mRNA-1:three_prime_utr;Parent=Msa0559500-mRNA-1
chr4_1 three_prime_UTR 58685898 58685964 58685898 ID=Msa0559500-mRNA-1:three_prime_utr;Parent=Msa0559500-mRNA-1
chr4_1 three_prime_UTR 58686067 58686112 58686067 ID=Msa0559500-mRNA-1:three_prime_utr;Parent=Msa0559500-mRNA-1
chr4_1 three_prime_UTR 58687273 58687357 58687273 ID=Msa0559500-mRNA-1:three_prime_utr;Parent=Msa0559500-mRNA-1
chr4_1 three_prime_UTR 58687452 58688093 58687452 ID=Msa0559500-mRNA-1:three_prime_utr;Parent=Msa0559500-mRNA-1
chr4_1 three_prime_UTR 58689325 58689585 58689325 ID=Msa0559500-mRNA-1:three_prime_utr;Parent=Msa0559500-mRNA-1
chr4_1 three_prime_UTR 58690236 58691059 58690236 ID=Msa0559500-mRNA-1:three_prime_utr;Parent=Msa0559500-mRNA-1
chr4_1 three_prime_UTR 58691308 58691753 58691308 ID=Msa0559500-mRNA-1:three_prime_utr;Parent=Msa0559500-mRNA-1
Gene Sequence

>Msa0559500

ATGGCATCGGCGTTATTAGCCAACGGTAACGAACCAAATTGGCTGCAACACAGAGGCGGTGGAGCTGAATTCATGGGTAAAGCACCTAACCCTAACCCTAAATTTAGTAACAAAAAGAGAACTCAATCCCCATCAGATGACGCTTCCTCAATCAATCGACGATCCAACGATAATCATTCACAATACGTTACTTTCAACATCGAATCGTACACAAAGACGGAGCTATACGAGCTCAAAAATCGACTCGTATCAGAACTCGACCAAATTCGTCAGCTTAAGACTCGAATTGAATCAGGTGAGTTTAAACCCAGGCTAAACCACAACGGTGGTGGTCCCACTAAGAAATCAGGGAGCAAGAAGGTTTCCGGCAACAAACGACCTTTTCCTGCGGTGAGGGAATTGAAGAAATCAAAGTCAGAGATTGGGGATGCGATGAAGGCTTGTGGTCAGATTTTGACGAAGCTCATGAAAAACAAAAGTGGTTGGATTTTTAACACTTGGATCTTTAACACTCCTGTAAATGCAACGGCTTTGAATCTTCATGATTACTTTGATGTAATTAAGCATCCTATGGATCTGGGCACTGTCAAGTCAAAACTTGCCAAGAATGCTTACTCTACGCCGTCGGATTTTGCTGCTGATGTGAAGTTAACGTTCAACAATGCATTGACATACAATCCCAAGGGCCATGATGTTAACACTGCGGCGAAGCAGCTTCTTGAAAAATTCGAGGAGCTTTATCGACCAATACACGAGAAATTTGATGAAAAAAGTTTTGATGATGAATTACAGGCTAGCTCGTGGAACCATGTTGAACCAGAGAGGGAAAGGGAGAGGGTGAAGAAGAAAGATAATCCAATTCCAATCCCTCCACCAGTAGCAAAACACCAAGAGCCACTGCCTGAGCCTGCTAGTACTTCTAACCAGCCAAGCACTTCGAATCCCCCATTAGCTCAGTCACCAGTTCGCATACCCTCCCCAACGCGAGCACTTCAAGTGAAGCCCTTGAAGCAGCCCAAGCCAAAGGCCAGGGATCCAAATAAGAGGGAAATGAATGTTGAGGAAAAACATAAGTTGGGACTAGGGTTGCAGATTTTGCCACCAGAGAAGATGGAACAAGTAGTACAGATCATAAGGAAGAGAAATGGGCATTTGGAGCAAGATGGGGATGAGATTGAGCTTGATATGGAGGCTGTTGACACGGAGACTCTCTGGGAACTCGATCGATTGGTTACCAATTGGAAAAAGATGGTGAGCAAGATTAAGCGGCAGGCGCTAATGGATAATAATAATGTGCCTTCAAACAAAGGCAATGGGGAATTGCCTGATAGGGAGAAGGTTGATGCAACCCCTCCTTCTGAGGGAAAGAAACAGAAGAAGATAGATGCTGTTGATGAGGATGTTGACATCGGGGATGATATGCCAGCAAACGATTTCCCACCTGTGGAGATTGAGCAAGATAAAGATATGGGTGGTACTGGTGGCCGTGCCAGTAGTAGTTCCAGTGGTTCCAGCAGCTCTGGGAGTGATTCCTCGTCGAGTGATTCGGATTCAGGGAGTTCTTCAGGAAGTGATTCTGAAGCTGGCAATGGTCATTTGTAG
Protein sequence

>Msa0559500

MASALLANGNEPNWLQHRGGGAEFMGKAPNPNPKFSNKKRTQSPSDDASSINRRSNDNHSQYVTFNIESYTKTELYELKNRLVSELDQIRQLKTRIESGEFKPRLNHNGGGPTKKSGSKKVSGNKRPFPAVRELKKSKSEIGDAMKACGQILTKLMKNKSGWIFNTWIFNTPVNATALNLHDYFDVIKHPMDLGTVKSKLAKNAYSTPSDFAADVKLTFNNALTYNPKGHDVNTAAKQLLEKFEELYRPIHEKFDEKSFDDELQASSWNHVEPERERERVKKKDNPIPIPPPVAKHQEPLPEPASTSNQPSTSNPPLAQSPVRIPSPTRALQVKPLKQPKPKARDPNKREMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQALMDNNNVPSNKGNGELPDREKVDATPPSEGKKQKKIDAVDEDVDIGDDMPANDFPPVEIEQDKDMGGTGGRASSSSSGSSSSGSDSSSSDSDSGSSSGSDSEAGNGHL*