Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0614850 | KEH38271.1 | 28.312 | 385 | 238 | 12 | 10 | 372 | 676 | 1044 | 1.55e-30 | 142 |
| Msa0614850 | KEH38271.1 | 92.571 | 700 | 48 | 1 | 1 | 700 | 890 | 1585 | 0.0 | 1338 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0614850 | G8A099 | 28.312 | 385 | 238 | 12 | 10 | 372 | 676 | 1044 | 7.39e-31 | 142 |
| Msa0614850 | G8A099 | 92.571 | 700 | 48 | 1 | 1 | 700 | 890 | 1585 | 0.0 | 1338 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0065370 | Msa0614850 | 0.804003 | 2.660597e-49 | -8.615850e-47 |
| Msa0614850 | Msa0701720 | 0.803381 | 3.581783e-49 | -8.615850e-47 |
| Msa0614850 | Msa0703710 | 0.928339 | 3.318780e-92 | -8.615850e-47 |
| Msa0614850 | Msa1187760 | 0.802572 | 5.265009e-49 | -8.615850e-47 |
| Msa0205440 | Msa0614850 | 0.882387 | 1.087341e-70 | -8.615850e-47 |
| Msa0248680 | Msa0614850 | 0.897489 | 1.337572e-76 | -8.615850e-47 |
| Msa0286940 | Msa0614850 | 0.854681 | 1.046596e-61 | -8.615850e-47 |
| Msa0325540 | Msa0614850 | 0.869149 | 3.844284e-66 | -8.615850e-47 |
| Msa0549370 | Msa0614850 | 0.801118 | 1.047021e-48 | -8.615850e-47 |
| Msa0565640 | Msa0614850 | 0.804882 | 1.745271e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0614850 | MtrunA17_Chr2g0311121 | 92.571 | 700 | 48 | 1 | 1 | 700 | 888 | 1583 | 0.0 | 1335 |
| Msa0614850 | MtrunA17_Chr2g0311121 | 28.205 | 390 | 242 | 12 | 5 | 372 | 669 | 1042 | 3.10e-35 | 144 |
| Msa0614850 | MtrunA17_Chr2g0311121 | 29.258 | 229 | 155 | 4 | 95 | 319 | 646 | 871 | 3.09e-19 | 93.2 |
| Msa0614850 | MtrunA17_Chr8g0382131 | 91.298 | 701 | 61 | 0 | 1 | 701 | 1002 | 1702 | 0.0 | 1324 |
| Msa0614850 | MtrunA17_Chr8g0382131 | 28.205 | 390 | 241 | 13 | 5 | 372 | 784 | 1156 | 1.67e-33 | 138 |
| Msa0614850 | MtrunA17_Chr8g0382131 | 28.947 | 228 | 155 | 4 | 95 | 318 | 761 | 985 | 1.03e-18 | 91.7 |
| Msa0614850 | MtrunA17_Chr8g0338441 | 69.088 | 702 | 210 | 3 | 1 | 701 | 1007 | 1702 | 0.0 | 994 |
| Msa0614850 | MtrunA17_Chr8g0338441 | 30.492 | 305 | 197 | 8 | 14 | 315 | 912 | 1204 | 1.58e-35 | 145 |
| Msa0614850 | MtrunA17_Chr8g0338441 | 31.464 | 321 | 205 | 8 | 5 | 319 | 787 | 1098 | 1.30e-32 | 135 |
| Msa0614850 | MtrunA17_Chr8g0338441 | 29.487 | 234 | 157 | 5 | 95 | 323 | 764 | 994 | 2.52e-18 | 90.1 |
| Msa0614850 | MtrunA17_Chr3g0079151 | 67.898 | 704 | 220 | 5 | 1 | 701 | 1009 | 1709 | 0.0 | 968 |
| Msa0614850 | MtrunA17_Chr3g0079151 | 27.649 | 387 | 249 | 13 | 5 | 372 | 789 | 1163 | 1.35e-30 | 129 |
| Msa0614850 | MtrunA17_Chr3g0079151 | 28.981 | 314 | 207 | 9 | 21 | 328 | 922 | 1225 | 8.93e-30 | 127 |
| Msa0614850 | MtrunA17_Chr3g0079151 | 29.741 | 232 | 151 | 5 | 95 | 319 | 766 | 992 | 8.78e-19 | 91.7 |
| Msa0614850 | MtrunA17_Chr8g0338331 | 67.143 | 700 | 223 | 3 | 1 | 700 | 963 | 1655 | 0.0 | 961 |
| Msa0614850 | MtrunA17_Chr8g0338331 | 28.165 | 316 | 209 | 10 | 17 | 328 | 872 | 1173 | 9.11e-27 | 117 |
| Msa0614850 | MtrunA17_Chr8g0338331 | 26.426 | 333 | 225 | 8 | 52 | 372 | 793 | 1117 | 1.86e-26 | 116 |
| Msa0614850 | MtrunA17_Chr8g0338331 | 28.696 | 230 | 154 | 4 | 95 | 319 | 722 | 946 | 9.13e-16 | 82.0 |
| Msa0614850 | MtrunA17_Chr8g0338311 | 66.191 | 701 | 228 | 3 | 1 | 701 | 1011 | 1702 | 0.0 | 955 |
| Msa0614850 | MtrunA17_Chr8g0338311 | 30.063 | 316 | 204 | 8 | 14 | 327 | 917 | 1217 | 8.17e-34 | 139 |
| Msa0614850 | MtrunA17_Chr8g0338311 | 32.119 | 302 | 190 | 8 | 10 | 306 | 798 | 1089 | 1.10e-33 | 139 |
| Msa0614850 | MtrunA17_Chr8g0338311 | 28.947 | 228 | 156 | 3 | 95 | 319 | 770 | 994 | 6.17e-21 | 98.6 |
| Msa0614850 | MtrunA17_Chr6g0454611 | 48.801 | 709 | 308 | 11 | 5 | 699 | 413 | 1080 | 0.0 | 627 |
| Msa0614850 | MtrunA17_Chr6g0454611 | 47.959 | 98 | 42 | 1 | 1 | 89 | 631 | 728 | 3.33e-17 | 86.3 |
| Msa0614850 | MtrunA17_Chr8g0338291 | 78.012 | 332 | 73 | 0 | 3 | 334 | 209 | 540 | 0.0 | 546 |
| Msa0614850 | MtrunA17_Chr8g0338291 | 28.395 | 324 | 192 | 9 | 39 | 327 | 103 | 421 | 4.38e-27 | 116 |
| Msa0614850 | MtrunA17_Chr8g0338281 | 72.961 | 233 | 59 | 2 | 314 | 546 | 10 | 238 | 4.87e-114 | 343 |
| Msa0614850 | MtrunA17_Chr8g0338271 | 84.783 | 138 | 20 | 1 | 565 | 701 | 1 | 138 | 7.01e-74 | 234 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0614850 | AT3G48770.1 | 40.449 | 712 | 400 | 12 | 3 | 698 | 1192 | 1895 | 7.37e-169 | 531 |
| Msa0614850 | AT3G48770.1 | 30.744 | 309 | 196 | 11 | 14 | 313 | 977 | 1276 | 5.52e-34 | 140 |
| Msa0614850 | AT3G48770.1 | 30.599 | 317 | 204 | 9 | 10 | 320 | 1092 | 1398 | 4.25e-31 | 131 |
| Msa0614850 | AT3G48770.1 | 33.040 | 227 | 139 | 6 | 100 | 318 | 952 | 1173 | 6.70e-22 | 102 |
| Msa0614850 | AT3G48770.2 | 40.449 | 712 | 400 | 12 | 3 | 698 | 1192 | 1895 | 7.37e-169 | 531 |
| Msa0614850 | AT3G48770.2 | 30.744 | 309 | 196 | 11 | 14 | 313 | 977 | 1276 | 5.52e-34 | 140 |
| Msa0614850 | AT3G48770.2 | 30.599 | 317 | 204 | 9 | 10 | 320 | 1092 | 1398 | 4.25e-31 | 131 |
| Msa0614850 | AT3G48770.2 | 33.040 | 227 | 139 | 6 | 100 | 318 | 952 | 1173 | 6.70e-22 | 102 |
Find 151 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTGCATTGAATTCTTTC+TGG | 0.112495 | 4_2:-63988695 | None:intergenic |
| CAGCTGAAGGGAACTGTTTA+TGG | 0.138932 | 4_2:+63988153 | Msa0614850:CDS |
| TTTAAAATCACCCTCATATT+TGG | 0.157957 | 4_2:+63987759 | Msa0614850:five_prime_UTR |
| TATTTCTGCCCAAATGTTTC+AGG | 0.185928 | 4_2:-63989218 | None:intergenic |
| TGCTTGTTCTTGCCTGAAAA+TGG | 0.195869 | 4_2:+63989587 | Msa0614850:CDS |
| ATAAAGCTGCCAAGAAAATT+TGG | 0.198820 | 4_2:+63988941 | Msa0614850:CDS |
| CCTGAGGCTCATCCAACTTC+TGG | 0.215317 | 4_2:-63989779 | None:intergenic |
| TCTTTGCTTCCTGTTGTTAC+AGG | 0.221014 | 4_2:-63989276 | None:intergenic |
| TTAAATGCTTGATAACAATT+TGG | 0.253106 | 4_2:-63987741 | None:intergenic |
| CTCTCTGAATTGATCACATT+GGG | 0.266913 | 4_2:+63989885 | Msa0614850:CDS |
| GAAGGAAAATTCAGACATTT+AGG | 0.266941 | 4_2:-63988420 | None:intergenic |
| TTGATGATTATGTTGATCTT+TGG | 0.277427 | 4_2:+63989130 | Msa0614850:CDS |
| TTCTTCAGATGAAGGTTATC+AGG | 0.305500 | 4_2:-63989333 | None:intergenic |
| GATGTTTATCCTGAAACATT+TGG | 0.311080 | 4_2:+63989209 | Msa0614850:CDS |
| GTGATTGATCATAAATTCTA+TGG | 0.318339 | 4_2:+63987973 | Msa0614850:CDS |
| TGAAGACACATGCTGGTTAT+AGG | 0.336295 | 4_2:+63988565 | Msa0614850:CDS |
| GGTTTGATTAAGCTCATTCT+TGG | 0.344044 | 4_2:+63989558 | Msa0614850:CDS |
| TTACCTTTGCCATGGAAGTC+AGG | 0.359808 | 4_2:+63989094 | Msa0614850:CDS |
| GGAAGAGATTGTCCAGGAAT+TGG | 0.363243 | 4_2:+63988541 | Msa0614850:CDS |
| TACAAAGAAAGATGACAAAA+TGG | 0.364518 | 4_2:+63989722 | Msa0614850:CDS |
| CAGAAAGAATTCAATGCAAT+AGG | 0.369703 | 4_2:+63988696 | Msa0614850:CDS |
| ACAGCTTCATGCCTCTTGTC+TGG | 0.379764 | 4_2:-63989612 | None:intergenic |
| GGTATCCTCAGCAGGACTTT+GGG | 0.382002 | 4_2:+63989385 | Msa0614850:CDS |
| AGCAAAGAAAACACACTTTC+AGG | 0.390400 | 4_2:-63988462 | None:intergenic |
| TCTTTGTCTCAAGGAAGTTC+AGG | 0.392949 | 4_2:-63989650 | None:intergenic |
| TTTCCATTGATGATGAGTTC+AGG | 0.393275 | 4_2:+63988520 | Msa0614850:CDS |
| AAAGGATGCTCCTTGCTTGC+CGG | 0.394081 | 4_2:+63988738 | Msa0614850:CDS |
| TTCTGGAAAGATGCTATTGT+AGG | 0.397942 | 4_2:-63988678 | None:intergenic |
| ATGTTTATCCTGAAACATTT+GGG | 0.401487 | 4_2:+63989210 | Msa0614850:CDS |
| TTCTTGGCAGCTTTATCCTC+AGG | 0.409894 | 4_2:-63988934 | None:intergenic |
| ATGTTGATCTTTGGAATGAA+TGG | 0.413066 | 4_2:+63989139 | Msa0614850:CDS |
| TGGTATCCTCAGCAGGACTT+TGG | 0.423557 | 4_2:+63989384 | Msa0614850:CDS |
| CCATATAAAATGCATTCTCT+TGG | 0.423812 | 4_2:-63988249 | None:intergenic |
| TAGTGTAGTCTTAAGTTCAT+TGG | 0.429988 | 4_2:+63987843 | Msa0614850:CDS |
| AGTCTTACAAACCACAGAAA+AGG | 0.431021 | 4_2:-63990105 | None:intergenic |
| CCAGAAGTTGGATGAGCCTC+AGG | 0.436408 | 4_2:+63989779 | Msa0614850:CDS |
| GGTACTTGTCTGAATACAAC+TGG | 0.439001 | 4_2:+63988908 | Msa0614850:intron |
| GAATGAATGGGAGAGTTCGC+TGG | 0.449620 | 4_2:+63989152 | Msa0614850:CDS |
| GATGTCATATAACTTAGAAA+TGG | 0.450996 | 4_2:-63989415 | None:intergenic |
| TCTTTCTTTAATCCAACTGA+TGG | 0.451371 | 4_2:+63988627 | Msa0614850:CDS |
| ATGTGTCTTCAACCAATTCC+TGG | 0.453213 | 4_2:-63988553 | None:intergenic |
| CTTCCTGAACTCATCATCAA+TGG | 0.455067 | 4_2:-63988523 | None:intergenic |
| TGTCAAAGAGGCCAAATATG+AGG | 0.465725 | 4_2:-63987770 | None:intergenic |
| TTCTTGTTGCAGACAGCTGA+AGG | 0.466613 | 4_2:+63988140 | Msa0614850:CDS |
| AGAATATTGTCAAAATATAC+AGG | 0.470191 | 4_2:+63988787 | Msa0614850:CDS |
| ATCAAACTACCTGTAACAAC+AGG | 0.473796 | 4_2:+63989267 | Msa0614850:CDS |
| TACCTTTGCCATGGAAGTCA+GGG | 0.475869 | 4_2:+63989095 | Msa0614850:CDS |
| TTAAACAGCAAACACATCTC+TGG | 0.478567 | 4_2:-63988591 | None:intergenic |
| CATATAAAATGCATTCTCTT+GGG | 0.485563 | 4_2:-63988248 | None:intergenic |
| AGACTAACATACTCACTTCA+TGG | 0.486084 | 4_2:-63990167 | None:intergenic |
| TTTCACTGTCGTCAATGAAA+GGG | 0.486682 | 4_2:-63988308 | None:intergenic |
| TGCTTCTCTCTTCAAACAGA+AGG | 0.488130 | 4_2:+63988074 | Msa0614850:CDS |
| CCTCTCTGAATTGATCACAT+TGG | 0.489488 | 4_2:+63989884 | Msa0614850:CDS |
| ATGACAAATGCTGTAAATTC+TGG | 0.489585 | 4_2:+63989187 | Msa0614850:CDS |
| AAGATGACAAAATGGTTCGC+TGG | 0.490814 | 4_2:+63989730 | Msa0614850:CDS |
| TGTTGATCTTTGGAATGAAT+GGG | 0.493934 | 4_2:+63989140 | Msa0614850:CDS |
| CTCAAGGTGACCGGCAAGCA+AGG | 0.496770 | 4_2:-63988748 | None:intergenic |
| ACAAAATGGTTCGCTGGGAA+AGG | 0.500089 | 4_2:+63989736 | Msa0614850:CDS |
| GCTGAATGATGGTGTTGAAA+TGG | 0.500210 | 4_2:+63989497 | Msa0614850:CDS |
| TACAGTTTATCACTGTCATC+AGG | 0.501149 | 4_2:+63989690 | Msa0614850:CDS |
| CTGTCCACCTTCAGTTCCAT+CGG | 0.503245 | 4_2:-63988968 | None:intergenic |
| GTCTTACAAACCACAGAAAA+GGG | 0.507243 | 4_2:-63990104 | None:intergenic |
| AAGAGGCATGAAGCTGTTCA+AGG | 0.512411 | 4_2:+63989618 | Msa0614850:CDS |
| CATGGCAATACATGATTACA+AGG | 0.514993 | 4_2:+63988341 | Msa0614850:CDS |
| AAGCAAAGAGATATTTCTGC+TGG | 0.515354 | 4_2:+63989290 | Msa0614850:CDS |
| TTTCTTGTATGACCAGGTGT+GGG | 0.524503 | 4_2:+63987918 | Msa0614850:CDS |
| TGTAGTCTTAAGTTCATTGG+AGG | 0.525391 | 4_2:+63987846 | Msa0614850:CDS |
| AGATGACAAAATGGTTCGCT+GGG | 0.525856 | 4_2:+63989731 | Msa0614850:CDS |
| TTCTTGAAGATATCTATGAT+AGG | 0.529049 | 4_2:+63989055 | Msa0614850:CDS |
| AAACTGTAGCTTACCATGAC+CGG | 0.530756 | 4_2:-63989675 | None:intergenic |
| TTTGGCCTCTTTGACAGCTG+AGG | 0.538870 | 4_2:+63987777 | Msa0614850:five_prime_UTR |
| TCTGACTGAGAATTCTGCAT+AGG | 0.539784 | 4_2:+63990011 | Msa0614850:exon |
| CTTTCTTTAATCCAACTGAT+GGG | 0.540609 | 4_2:+63988628 | Msa0614850:CDS |
| GAATTCTCAGTCAGAAGGGA+AGG | 0.541167 | 4_2:-63990003 | None:intergenic |
| GAATCTTCCTTGCTGAATGA+TGG | 0.544376 | 4_2:+63989486 | Msa0614850:CDS |
| ATGCAGAATTCTCAGTCAGA+AGG | 0.547360 | 4_2:-63990008 | None:intergenic |
| TGATGATATTGAATTTCTGA+TGG | 0.557518 | 4_2:+63989929 | Msa0614850:CDS |
| TGTCCACCTTCAGTTCCATC+GGG | 0.559325 | 4_2:-63988967 | None:intergenic |
| AAACACACTTTCAGGAGTAA+TGG | 0.560473 | 4_2:-63988454 | None:intergenic |
| GCAAGGAGCATCCTTTCTCT+AGG | 0.560523 | 4_2:-63988731 | None:intergenic |
| GTAATGGTGGAGGGATCTGA+AGG | 0.561652 | 4_2:-63988438 | None:intergenic |
| AGAGAGAATCTCAAGGTGAC+CGG | 0.561652 | 4_2:-63988757 | None:intergenic |
| TGAGACAAAGACGCCGGTCA+TGG | 0.562304 | 4_2:+63989662 | Msa0614850:CDS |
| TCAATGAAAGGCCCATCAGT+TGG | 0.562806 | 4_2:-63988639 | None:intergenic |
| GGAGTGATAGTTGGCACAAG+TGG | 0.564698 | 4_2:+63987712 | Msa0614850:five_prime_UTR |
| TGGATTCCCGATGGAACTGA+AGG | 0.566342 | 4_2:+63988961 | Msa0614850:CDS |
| AGTTCAGGAAGAGATTGTCC+AGG | 0.567268 | 4_2:+63988535 | Msa0614850:CDS |
| GTTTCTTGTATGACCAGGTG+TGG | 0.570066 | 4_2:+63987917 | Msa0614850:CDS |
| AAGGAAGAGCTGAAAAGCAC+TGG | 0.573273 | 4_2:+63988360 | Msa0614850:CDS |
| AAGAAAATTTGGATTCCCGA+TGG | 0.576448 | 4_2:+63988952 | Msa0614850:CDS |
| GATGATATGCATCAGATCCA+TGG | 0.576735 | 4_2:+63987813 | Msa0614850:exon |
| TTCTCTGAAACTATATCAGA+AGG | 0.578383 | 4_2:+63989828 | Msa0614850:CDS |
| GAAGATATAAATTTCCACTC+GGG | 0.580027 | 4_2:-63988273 | None:intergenic |
| AATTGGTTGAAGACACATGC+TGG | 0.580147 | 4_2:+63988558 | Msa0614850:CDS |
| AGCCCTGACTTCCATGGCAA+AGG | 0.580703 | 4_2:-63989097 | None:intergenic |
| GGGTTCAGCCCTGACTTCCA+TGG | 0.582097 | 4_2:-63989103 | None:intergenic |
| GTGATCAATTCAGAGAGGGC+AGG | 0.583832 | 4_2:-63989879 | None:intergenic |
| AATGAACTTAAGACTACACT+AGG | 0.584914 | 4_2:-63987841 | None:intergenic |
| ATTAAAGAAAGAACTCCACT+TGG | 0.586157 | 4_2:-63988616 | None:intergenic |
| GTCAAAGAGGCCAAATATGA+GGG | 0.587936 | 4_2:-63987769 | None:intergenic |
| TCTTGTTGCAGACAGCTGAA+GGG | 0.591504 | 4_2:+63988141 | Msa0614850:CDS |
| GACTACACTAGGGTCATCCA+TGG | 0.591867 | 4_2:-63987830 | None:intergenic |
| GTCACCACTGACCTAGAGAA+AGG | 0.592850 | 4_2:+63988720 | Msa0614850:CDS |
| TAGAATTTATGATCAATCAC+AGG | 0.594080 | 4_2:-63987970 | None:intergenic |
| ATTTATGATCAATCACAGGC+AGG | 0.597481 | 4_2:-63987966 | None:intergenic |
| TGACCGGCGTCTTTGTCTCA+AGG | 0.597685 | 4_2:-63989659 | None:intergenic |
| CACACTTTCAGGAGTAATGG+TGG | 0.598081 | 4_2:-63988451 | None:intergenic |
| ATTCCCGATGGAACTGAAGG+TGG | 0.598358 | 4_2:+63988964 | Msa0614850:CDS |
| GCATTATACATAATCAGAAG+TGG | 0.598974 | 4_2:+63988196 | Msa0614850:CDS |
| AACAGCCTCAGCTGTCAAAG+AGG | 0.599829 | 4_2:-63987782 | None:intergenic |
| AAGTGGCTGTATACAAAGGT+CGG | 0.604644 | 4_2:+63988213 | Msa0614850:CDS |
| GTAGTCTTAAGTTCATTGGA+GGG | 0.605013 | 4_2:+63987847 | Msa0614850:CDS |
| TGCAGAATTCTCAGTCAGAA+GGG | 0.606339 | 4_2:-63990007 | None:intergenic |
| AGCTGCTTGAAGACAAACAT+GGG | 0.609366 | 4_2:+63987874 | Msa0614850:CDS |
| ATAATGCTTGAGAAATCAGA+AGG | 0.612039 | 4_2:-63988180 | None:intergenic |
| TGAAGATATAAATTTCCACT+CGG | 0.612055 | 4_2:-63988274 | None:intergenic |
| TATAGTTTCAGAGAAATATG+TGG | 0.615430 | 4_2:-63989820 | None:intergenic |
| ATCAACATAATCATCAAGTG+AGG | 0.619346 | 4_2:-63989124 | None:intergenic |
| TTCAACACCATCATTCAGCA+AGG | 0.628441 | 4_2:-63989493 | None:intergenic |
| CAATGTGATCAATTCAGAGA+GGG | 0.630743 | 4_2:-63989883 | None:intergenic |
| ACTTTCAGGAGTAATGGTGG+AGG | 0.632253 | 4_2:-63988448 | None:intergenic |
| TTCTTGTATGACCAGGTGTG+GGG | 0.634092 | 4_2:+63987919 | Msa0614850:CDS |
| GCACAAATCTCACTCCATGT+TGG | 0.635049 | 4_2:-63988398 | None:intergenic |
| CACTGTCAGAGAGAATCTCA+AGG | 0.635671 | 4_2:-63988764 | None:intergenic |
| TATTTCAGTGCATTTCCCTG+AGG | 0.640303 | 4_2:-63989795 | None:intergenic |
| TGAAAATGGAACCAGACAAG+AGG | 0.640565 | 4_2:+63989601 | Msa0614850:CDS |
| TCAACATAATCATCAAGTGA+GGG | 0.641694 | 4_2:-63989123 | None:intergenic |
| TGGAACTGAAGGTGGACAGT+GGG | 0.641990 | 4_2:+63988972 | Msa0614850:CDS |
| ACATACAATAATAACAACAA+AGG | 0.642467 | 4_2:-63990139 | None:intergenic |
| TCAGAAGTGGCTGTATACAA+AGG | 0.642781 | 4_2:+63988209 | Msa0614850:CDS |
| ATGGAACTGAAGGTGGACAG+TGG | 0.643866 | 4_2:+63988971 | Msa0614850:CDS |
| GCATCCTTTCTCTAGGTCAG+TGG | 0.646549 | 4_2:-63988724 | None:intergenic |
| CTTTCAGGAGTAATGGTGGA+GGG | 0.646779 | 4_2:-63988447 | None:intergenic |
| CAGAAGTTGGATGAGCCTCA+GGG | 0.650696 | 4_2:+63989780 | Msa0614850:CDS |
| AAGCTGCTTGAAGACAAACA+TGG | 0.651201 | 4_2:+63987873 | Msa0614850:CDS |
| CAGAAGGGAAGGCAGAACTG+AGG | 0.652776 | 4_2:-63989992 | None:intergenic |
| TCATACAAGAAACATTCACT+TGG | 0.652808 | 4_2:-63987907 | None:intergenic |
| GAAGGCCCAAAGTCCTGCTG+AGG | 0.659475 | 4_2:-63989390 | None:intergenic |
| CAGAGAAGAAACTTTCTGAG+AGG | 0.660381 | 4_2:+63989241 | Msa0614850:CDS |
| GTTTGCTGTTTAATTCCAAG+TGG | 0.662733 | 4_2:+63988601 | Msa0614850:CDS |
| AACAGCAAACACATCTCTGG+AGG | 0.669999 | 4_2:-63988588 | None:intergenic |
| TGAATGTTTCTTGTATGACC+AGG | 0.671735 | 4_2:+63987912 | Msa0614850:CDS |
| TGAATACAACTGGAAACCTG+AGG | 0.690265 | 4_2:+63988918 | Msa0614850:CDS |
| TATAACTTAGAAATGGACGA+AGG | 0.698447 | 4_2:-63989408 | None:intergenic |
| ATGAACTTAAGACTACACTA+GGG | 0.702168 | 4_2:-63987840 | None:intergenic |
| CTTCCTTGAGACAAAGACGC+CGG | 0.709949 | 4_2:+63989656 | Msa0614850:CDS |
| ACTGAAGCAAATCGGTGTGG+TGG | 0.715774 | 4_2:+63988023 | Msa0614850:CDS |
| CCAATGTGATCAATTCAGAG+AGG | 0.728208 | 4_2:-63989884 | None:intergenic |
| GTTGTTACTGAATACCAACA+TGG | 0.760602 | 4_2:+63988384 | Msa0614850:CDS |
| GTACGATGCATTCTTCAGAG+AGG | 0.762566 | 4_2:-63988996 | None:intergenic |
| TGAACTGAAGCAAATCGGTG+TGG | 0.762633 | 4_2:+63988020 | Msa0614850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATTGTGAATATACAT+AGG | + | chr4_2:63988887-63988906 | Msa0614850:intron | 15.0% |
| !!! | TTAAATGCTTGATAACAATT+TGG | - | chr4_2:63987744-63987763 | None:intergenic | 20.0% |
| !!! | TATGCTTTTCATATAAACTT+CGG | - | chr4_2:63988497-63988516 | None:intergenic | 20.0% |
| !! | TAAAAATTTGCATCAATGAA+AGG | - | chr4_2:63988654-63988673 | None:intergenic | 20.0% |
| !!! | TTCATTGATGCAAATTTTTA+TGG | + | chr4_2:63988654-63988673 | Msa0614850:CDS | 20.0% |
| !! | AGAATATTGTCAAAATATAC+AGG | + | chr4_2:63988787-63988806 | Msa0614850:CDS | 20.0% |
| !!! | GATATTCTTTTCAACTTAAA+AGG | + | chr4_2:63989537-63989556 | Msa0614850:CDS | 20.0% |
| !! | ACATACAATAATAACAACAA+AGG | - | chr4_2:63990142-63990161 | None:intergenic | 20.0% |
| !! | TTTAAAATCACCCTCATATT+TGG | + | chr4_2:63987759-63987778 | Msa0614850:five_prime_UTR | 25.0% |
| !! | TGCATTTTTGATGTATTCAA+CGG | + | chr4_2:63987943-63987962 | Msa0614850:CDS | 25.0% |
| ! | TAGAATTTATGATCAATCAC+AGG | - | chr4_2:63987973-63987992 | None:intergenic | 25.0% |
| ! | GTGATTGATCATAAATTCTA+TGG | + | chr4_2:63987973-63987992 | Msa0614850:CDS | 25.0% |
| ! | AAAAATGAACTGAAGCAAAT+CGG | + | chr4_2:63988015-63988034 | Msa0614850:CDS | 25.0% |
| ! | CATATAAAATGCATTCTCTT+GGG | - | chr4_2:63988251-63988270 | None:intergenic | 25.0% |
| ! | TGAAGATATAAATTTCCACT+CGG | - | chr4_2:63988277-63988296 | None:intergenic | 25.0% |
| ! | TTAAACCAAAAAGCTTATCA+GGG | - | chr4_2:63989026-63989045 | None:intergenic | 25.0% |
| ! | TTTAAACCAAAAAGCTTATC+AGG | - | chr4_2:63989027-63989046 | None:intergenic | 25.0% |
| ! | TTCTTGAAGATATCTATGAT+AGG | + | chr4_2:63989055-63989074 | Msa0614850:CDS | 25.0% |
| !! | TTGATGATTATGTTGATCTT+TGG | + | chr4_2:63989130-63989149 | Msa0614850:CDS | 25.0% |
| ! | ATGTTTATCCTGAAACATTT+GGG | + | chr4_2:63989210-63989229 | Msa0614850:CDS | 25.0% |
| ! | GATGTCATATAACTTAGAAA+TGG | - | chr4_2:63989418-63989437 | None:intergenic | 25.0% |
| ! | TATGACATCTACAGAAAAAT+CGG | + | chr4_2:63989429-63989448 | Msa0614850:CDS | 25.0% |
| ! | TACAAAGAAAGATGACAAAA+TGG | + | chr4_2:63989722-63989741 | Msa0614850:CDS | 25.0% |
| ! | TATAGTTTCAGAGAAATATG+TGG | - | chr4_2:63989823-63989842 | None:intergenic | 25.0% |
| ! | TGATGATATTGAATTTCTGA+TGG | + | chr4_2:63989929-63989948 | Msa0614850:CDS | 25.0% |
| !! | GTTTTCTTGTTCTTAAAACT+TGG | + | chr4_2:63990079-63990098 | Msa0614850:three_prime_UTR | 25.0% |
| ATGAACTTAAGACTACACTA+GGG | - | chr4_2:63987843-63987862 | None:intergenic | 30.0% | |
| AATGAACTTAAGACTACACT+AGG | - | chr4_2:63987844-63987863 | None:intergenic | 30.0% | |
| ! | TAGTGTAGTCTTAAGTTCAT+TGG | + | chr4_2:63987843-63987862 | Msa0614850:CDS | 30.0% |
| TCATACAAGAAACATTCACT+TGG | - | chr4_2:63987910-63987929 | None:intergenic | 30.0% | |
| ATAATGCTTGAGAAATCAGA+AGG | - | chr4_2:63988183-63988202 | None:intergenic | 30.0% | |
| GCATTATACATAATCAGAAG+TGG | + | chr4_2:63988196-63988215 | Msa0614850:CDS | 30.0% | |
| CCATATAAAATGCATTCTCT+TGG | - | chr4_2:63988252-63988271 | None:intergenic | 30.0% | |
| ! | CCAAGAGAATGCATTTTATA+TGG | + | chr4_2:63988249-63988268 | Msa0614850:CDS | 30.0% |
| GAAGATATAAATTTCCACTC+GGG | - | chr4_2:63988276-63988295 | None:intergenic | 30.0% | |
| ! | GACGACAGTGAAAATTTTTA+TGG | + | chr4_2:63988318-63988337 | Msa0614850:CDS | 30.0% |
| ! | CAGTGAAAATTTTTATGGCA+TGG | + | chr4_2:63988323-63988342 | Msa0614850:CDS | 30.0% |
| GAAGGAAAATTCAGACATTT+AGG | - | chr4_2:63988423-63988442 | None:intergenic | 30.0% | |
| ATTAAAGAAAGAACTCCACT+TGG | - | chr4_2:63988619-63988638 | None:intergenic | 30.0% | |
| TCTTTCTTTAATCCAACTGA+TGG | + | chr4_2:63988627-63988646 | Msa0614850:CDS | 30.0% | |
| CTTTCTTTAATCCAACTGAT+GGG | + | chr4_2:63988628-63988647 | Msa0614850:CDS | 30.0% | |
| CTATTGCATTGAATTCTTTC+TGG | - | chr4_2:63988698-63988717 | None:intergenic | 30.0% | |
| CAGAAAGAATTCAATGCAAT+AGG | + | chr4_2:63988696-63988715 | Msa0614850:CDS | 30.0% | |
| ATCAAAGTCAAAGAGAGTTA+AGG | - | chr4_2:63988869-63988888 | None:intergenic | 30.0% | |
| ATAAAGCTGCCAAGAAAATT+TGG | + | chr4_2:63988941-63988960 | Msa0614850:CDS | 30.0% | |
| TCAACATAATCATCAAGTGA+GGG | - | chr4_2:63989126-63989145 | None:intergenic | 30.0% | |
| ATCAACATAATCATCAAGTG+AGG | - | chr4_2:63989127-63989146 | None:intergenic | 30.0% | |
| !! | ATGTTGATCTTTGGAATGAA+TGG | + | chr4_2:63989139-63989158 | Msa0614850:CDS | 30.0% |
| !! | TGTTGATCTTTGGAATGAAT+GGG | + | chr4_2:63989140-63989159 | Msa0614850:CDS | 30.0% |
| ATGACAAATGCTGTAAATTC+TGG | + | chr4_2:63989187-63989206 | Msa0614850:CDS | 30.0% | |
| GATGTTTATCCTGAAACATT+TGG | + | chr4_2:63989209-63989228 | Msa0614850:CDS | 30.0% | |
| TATAACTTAGAAATGGACGA+AGG | - | chr4_2:63989411-63989430 | None:intergenic | 30.0% | |
| !! | TTCTCTGAAACTATATCAGA+AGG | + | chr4_2:63989828-63989847 | Msa0614850:CDS | 30.0% |
| ! | TGTAGTCTTAAGTTCATTGG+AGG | + | chr4_2:63987846-63987865 | Msa0614850:CDS | 35.0% |
| ! | GTAGTCTTAAGTTCATTGGA+GGG | + | chr4_2:63987847-63987866 | Msa0614850:CDS | 35.0% |
| TGAATGTTTCTTGTATGACC+AGG | + | chr4_2:63987912-63987931 | Msa0614850:CDS | 35.0% | |
| ATTTATGATCAATCACAGGC+AGG | - | chr4_2:63987969-63987988 | None:intergenic | 35.0% | |
| TTTCACTGTCGTCAATGAAA+GGG | - | chr4_2:63988311-63988330 | None:intergenic | 35.0% | |
| ! | TTTTCACTGTCGTCAATGAA+AGG | - | chr4_2:63988312-63988331 | None:intergenic | 35.0% |
| CATGGCAATACATGATTACA+AGG | + | chr4_2:63988341-63988360 | Msa0614850:CDS | 35.0% | |
| GTTGTTACTGAATACCAACA+TGG | + | chr4_2:63988384-63988403 | Msa0614850:CDS | 35.0% | |
| AAACACACTTTCAGGAGTAA+TGG | - | chr4_2:63988457-63988476 | None:intergenic | 35.0% | |
| AGCAAAGAAAACACACTTTC+AGG | - | chr4_2:63988465-63988484 | None:intergenic | 35.0% | |
| !! | TGAAAGTGTGTTTTCTTTGC+TGG | + | chr4_2:63988464-63988483 | Msa0614850:CDS | 35.0% |
| !! | TTTCCATTGATGATGAGTTC+AGG | + | chr4_2:63988520-63988539 | Msa0614850:CDS | 35.0% |
| TTAAACAGCAAACACATCTC+TGG | - | chr4_2:63988594-63988613 | None:intergenic | 35.0% | |
| !! | GTTTGCTGTTTAATTCCAAG+TGG | + | chr4_2:63988601-63988620 | Msa0614850:CDS | 35.0% |
| ! | TTCTGGAAAGATGCTATTGT+AGG | - | chr4_2:63988681-63988700 | None:intergenic | 35.0% |
| CAAAAAGAGACATAGCATGT+GGG | - | chr4_2:63988828-63988847 | None:intergenic | 35.0% | |
| ! | ATCGGGAATCCAAATTTTCT+TGG | - | chr4_2:63988953-63988972 | None:intergenic | 35.0% |
| AAGAAAATTTGGATTCCCGA+TGG | + | chr4_2:63988952-63988971 | Msa0614850:CDS | 35.0% | |
| TCCATGGCAAAGGTAAAAAA+GGG | - | chr4_2:63989090-63989109 | None:intergenic | 35.0% | |
| TTCCATGGCAAAGGTAAAAA+AGG | - | chr4_2:63989091-63989110 | None:intergenic | 35.0% | |
| ! | TATTTCTGCCCAAATGTTTC+AGG | - | chr4_2:63989221-63989240 | None:intergenic | 35.0% |
| ATCAAACTACCTGTAACAAC+AGG | + | chr4_2:63989267-63989286 | Msa0614850:CDS | 35.0% | |
| ! | AAGCAAAGAGATATTTCTGC+TGG | + | chr4_2:63989290-63989309 | Msa0614850:CDS | 35.0% |
| TTCTTCAGATGAAGGTTATC+AGG | - | chr4_2:63989336-63989355 | None:intergenic | 35.0% | |
| CAAAAAGCTTCTTCAGATGA+AGG | - | chr4_2:63989344-63989363 | None:intergenic | 35.0% | |
| GGTTTGATTAAGCTCATTCT+TGG | + | chr4_2:63989558-63989577 | Msa0614850:CDS | 35.0% | |
| TACAGTTTATCACTGTCATC+AGG | + | chr4_2:63989690-63989709 | Msa0614850:CDS | 35.0% | |
| ! | GAAGTTTTTCATCCAGAAGT+TGG | + | chr4_2:63989767-63989786 | Msa0614850:CDS | 35.0% |
| CAATGTGATCAATTCAGAGA+GGG | - | chr4_2:63989886-63989905 | None:intergenic | 35.0% | |
| CTCTCTGAATTGATCACATT+GGG | + | chr4_2:63989885-63989904 | Msa0614850:CDS | 35.0% | |
| ! | GAACTTTCAGATTTTCAGTG+AGG | + | chr4_2:63989959-63989978 | Msa0614850:CDS | 35.0% |
| GTCTTACAAACCACAGAAAA+GGG | - | chr4_2:63990107-63990126 | None:intergenic | 35.0% | |
| AGTCTTACAAACCACAGAAA+AGG | - | chr4_2:63990108-63990127 | None:intergenic | 35.0% | |
| AGACTAACATACTCACTTCA+TGG | - | chr4_2:63990170-63990189 | None:intergenic | 35.0% | |
| GTCAAAGAGGCCAAATATGA+GGG | - | chr4_2:63987772-63987791 | None:intergenic | 40.0% | |
| TGTCAAAGAGGCCAAATATG+AGG | - | chr4_2:63987773-63987792 | None:intergenic | 40.0% | |
| GATGATATGCATCAGATCCA+TGG | + | chr4_2:63987813-63987832 | Msa0614850:exon | 40.0% | |
| AAGCTGCTTGAAGACAAACA+TGG | + | chr4_2:63987873-63987892 | Msa0614850:CDS | 40.0% | |
| AGCTGCTTGAAGACAAACAT+GGG | + | chr4_2:63987874-63987893 | Msa0614850:CDS | 40.0% | |
| TTTCTTGTATGACCAGGTGT+GGG | + | chr4_2:63987918-63987937 | Msa0614850:CDS | 40.0% | |
| TGCTTCTCTCTTCAAACAGA+AGG | + | chr4_2:63988074-63988093 | Msa0614850:CDS | 40.0% | |
| TCAGAAGTGGCTGTATACAA+AGG | + | chr4_2:63988209-63988228 | Msa0614850:CDS | 40.0% | |
| AAGTGGCTGTATACAAAGGT+CGG | + | chr4_2:63988213-63988232 | Msa0614850:CDS | 40.0% | |
| CTTCCTGAACTCATCATCAA+TGG | - | chr4_2:63988526-63988545 | None:intergenic | 40.0% | |
| ATGTGTCTTCAACCAATTCC+TGG | - | chr4_2:63988556-63988575 | None:intergenic | 40.0% | |
| AATTGGTTGAAGACACATGC+TGG | + | chr4_2:63988558-63988577 | Msa0614850:CDS | 40.0% | |
| ! | TGAAGACACATGCTGGTTAT+AGG | + | chr4_2:63988565-63988584 | Msa0614850:CDS | 40.0% |
| GCAAAAAGAGACATAGCATG+TGG | - | chr4_2:63988829-63988848 | None:intergenic | 40.0% | |
| TCAAAGAGAGTTAAGGTGAC+TGG | - | chr4_2:63988862-63988881 | None:intergenic | 40.0% | |
| GGTACTTGTCTGAATACAAC+TGG | + | chr4_2:63988908-63988927 | Msa0614850:intron | 40.0% | |
| TGAATACAACTGGAAACCTG+AGG | + | chr4_2:63988918-63988937 | Msa0614850:CDS | 40.0% | |
| ! | CATGACCCTGATAAGCTTTT+TGG | + | chr4_2:63989018-63989037 | Msa0614850:CDS | 40.0% |
| !!! | TCCCTTTTTTACCTTTGCCA+TGG | + | chr4_2:63989086-63989105 | Msa0614850:CDS | 40.0% |
| CAGAGAAGAAACTTTCTGAG+AGG | + | chr4_2:63989241-63989260 | Msa0614850:CDS | 40.0% | |
| TCTTTGCTTCCTGTTGTTAC+AGG | - | chr4_2:63989279-63989298 | None:intergenic | 40.0% | |
| !! | TCTGAAGAAGCTTTTTGAGC+AGG | + | chr4_2:63989347-63989366 | Msa0614850:CDS | 40.0% |
| ! | AGCAGGAGAAGATTTTTGTG+TGG | + | chr4_2:63989364-63989383 | Msa0614850:CDS | 40.0% |
| GAATCTTCCTTGCTGAATGA+TGG | + | chr4_2:63989486-63989505 | Msa0614850:CDS | 40.0% | |
| TTCAACACCATCATTCAGCA+AGG | - | chr4_2:63989496-63989515 | None:intergenic | 40.0% | |
| ! | GCTGAATGATGGTGTTGAAA+TGG | + | chr4_2:63989497-63989516 | Msa0614850:CDS | 40.0% |
| !! | TTTTCAGGCAAGAACAAGCA+AGG | - | chr4_2:63989587-63989606 | None:intergenic | 40.0% |
| TGCTTGTTCTTGCCTGAAAA+TGG | + | chr4_2:63989587-63989606 | Msa0614850:CDS | 40.0% | |
| !! | TCTTGTCTGGTTCCATTTTC+AGG | - | chr4_2:63989602-63989621 | None:intergenic | 40.0% |
| TGAAAATGGAACCAGACAAG+AGG | + | chr4_2:63989601-63989620 | Msa0614850:CDS | 40.0% | |
| TCTTTGTCTCAAGGAAGTTC+AGG | - | chr4_2:63989653-63989672 | None:intergenic | 40.0% | |
| AAACTGTAGCTTACCATGAC+CGG | - | chr4_2:63989678-63989697 | None:intergenic | 40.0% | |
| AAGATGACAAAATGGTTCGC+TGG | + | chr4_2:63989730-63989749 | Msa0614850:CDS | 40.0% | |
| AGATGACAAAATGGTTCGCT+GGG | + | chr4_2:63989731-63989750 | Msa0614850:CDS | 40.0% | |
| TATTTCAGTGCATTTCCCTG+AGG | - | chr4_2:63989798-63989817 | None:intergenic | 40.0% | |
| CCAATGTGATCAATTCAGAG+AGG | - | chr4_2:63989887-63989906 | None:intergenic | 40.0% | |
| CCTCTCTGAATTGATCACAT+TGG | + | chr4_2:63989884-63989903 | Msa0614850:CDS | 40.0% | |
| TGCAGAATTCTCAGTCAGAA+GGG | - | chr4_2:63990010-63990029 | None:intergenic | 40.0% | |
| ATGCAGAATTCTCAGTCAGA+AGG | - | chr4_2:63990011-63990030 | None:intergenic | 40.0% | |
| TCTGACTGAGAATTCTGCAT+AGG | + | chr4_2:63990011-63990030 | Msa0614850:exon | 40.0% | |
| ! | AAACTTGGTTCCCTTTTCTG+TGG | + | chr4_2:63990094-63990113 | Msa0614850:three_prime_UTR | 40.0% |
| GTTTCTTGTATGACCAGGTG+TGG | + | chr4_2:63987917-63987936 | Msa0614850:CDS | 45.0% | |
| TTCTTGTATGACCAGGTGTG+GGG | + | chr4_2:63987919-63987938 | Msa0614850:CDS | 45.0% | |
| TGAACTGAAGCAAATCGGTG+TGG | + | chr4_2:63988020-63988039 | Msa0614850:CDS | 45.0% | |
| TTCTTGTTGCAGACAGCTGA+AGG | + | chr4_2:63988140-63988159 | Msa0614850:CDS | 45.0% | |
| TCTTGTTGCAGACAGCTGAA+GGG | + | chr4_2:63988141-63988160 | Msa0614850:CDS | 45.0% | |
| CAGCTGAAGGGAACTGTTTA+TGG | + | chr4_2:63988153-63988172 | Msa0614850:CDS | 45.0% | |
| ! | GCATTTTATATGGTCCCGAG+TGG | + | chr4_2:63988259-63988278 | Msa0614850:CDS | 45.0% |
| ! | AAGGAAGAGCTGAAAAGCAC+TGG | + | chr4_2:63988360-63988379 | Msa0614850:CDS | 45.0% |
| GCACAAATCTCACTCCATGT+TGG | - | chr4_2:63988401-63988420 | None:intergenic | 45.0% | |
| ! | CTTTCAGGAGTAATGGTGGA+GGG | - | chr4_2:63988450-63988469 | None:intergenic | 45.0% |
| ACTTTCAGGAGTAATGGTGG+AGG | - | chr4_2:63988451-63988470 | None:intergenic | 45.0% | |
| CACACTTTCAGGAGTAATGG+TGG | - | chr4_2:63988454-63988473 | None:intergenic | 45.0% | |
| AGTTCAGGAAGAGATTGTCC+AGG | + | chr4_2:63988535-63988554 | Msa0614850:CDS | 45.0% | |
| GGAAGAGATTGTCCAGGAAT+TGG | + | chr4_2:63988541-63988560 | Msa0614850:CDS | 45.0% | |
| AACAGCAAACACATCTCTGG+AGG | - | chr4_2:63988591-63988610 | None:intergenic | 45.0% | |
| TCAATGAAAGGCCCATCAGT+TGG | - | chr4_2:63988642-63988661 | None:intergenic | 45.0% | |
| AGAGAGAATCTCAAGGTGAC+CGG | - | chr4_2:63988760-63988779 | None:intergenic | 45.0% | |
| CACTGTCAGAGAGAATCTCA+AGG | - | chr4_2:63988767-63988786 | None:intergenic | 45.0% | |
| ! | TTCTTGGCAGCTTTATCCTC+AGG | - | chr4_2:63988937-63988956 | None:intergenic | 45.0% |
| GTACGATGCATTCTTCAGAG+AGG | - | chr4_2:63988999-63989018 | None:intergenic | 45.0% | |
| TTACCTTTGCCATGGAAGTC+AGG | + | chr4_2:63989094-63989113 | Msa0614850:CDS | 45.0% | |
| TACCTTTGCCATGGAAGTCA+GGG | + | chr4_2:63989095-63989114 | Msa0614850:CDS | 45.0% | |
| ! | TTTTGTGTGGTATCCTCAGC+AGG | + | chr4_2:63989377-63989396 | Msa0614850:CDS | 45.0% |
| ! | AAGAGGCATGAAGCTGTTCA+AGG | + | chr4_2:63989618-63989637 | Msa0614850:CDS | 45.0% |
| ACAAAATGGTTCGCTGGGAA+AGG | + | chr4_2:63989736-63989755 | Msa0614850:CDS | 45.0% | |
| GAATTCTCAGTCAGAAGGGA+AGG | - | chr4_2:63990006-63990025 | None:intergenic | 45.0% | |
| GGAGTGATAGTTGGCACAAG+TGG | + | chr4_2:63987712-63987731 | Msa0614850:five_prime_UTR | 50.0% | |
| TTTGGCCTCTTTGACAGCTG+AGG | + | chr4_2:63987777-63987796 | Msa0614850:five_prime_UTR | 50.0% | |
| AACAGCCTCAGCTGTCAAAG+AGG | - | chr4_2:63987785-63987804 | None:intergenic | 50.0% | |
| GACTACACTAGGGTCATCCA+TGG | - | chr4_2:63987833-63987852 | None:intergenic | 50.0% | |
| ACTGAAGCAAATCGGTGTGG+TGG | + | chr4_2:63988023-63988042 | Msa0614850:CDS | 50.0% | |
| ! | GTAATGGTGGAGGGATCTGA+AGG | - | chr4_2:63988441-63988460 | None:intergenic | 50.0% |
| GTCACCACTGACCTAGAGAA+AGG | + | chr4_2:63988720-63988739 | Msa0614850:CDS | 50.0% | |
| GCATCCTTTCTCTAGGTCAG+TGG | - | chr4_2:63988727-63988746 | None:intergenic | 50.0% | |
| !! | GCAAGGAGCATCCTTTCTCT+AGG | - | chr4_2:63988734-63988753 | None:intergenic | 50.0% |
| AAAGGATGCTCCTTGCTTGC+CGG | + | chr4_2:63988738-63988757 | Msa0614850:CDS | 50.0% | |
| TGGATTCCCGATGGAACTGA+AGG | + | chr4_2:63988961-63988980 | Msa0614850:CDS | 50.0% | |
| ATTCCCGATGGAACTGAAGG+TGG | + | chr4_2:63988964-63988983 | Msa0614850:CDS | 50.0% | |
| TGTCCACCTTCAGTTCCATC+GGG | - | chr4_2:63988970-63988989 | None:intergenic | 50.0% | |
| CTGTCCACCTTCAGTTCCAT+CGG | - | chr4_2:63988971-63988990 | None:intergenic | 50.0% | |
| ATGGAACTGAAGGTGGACAG+TGG | + | chr4_2:63988971-63988990 | Msa0614850:CDS | 50.0% | |
| TGGAACTGAAGGTGGACAGT+GGG | + | chr4_2:63988972-63988991 | Msa0614850:CDS | 50.0% | |
| GAATGAATGGGAGAGTTCGC+TGG | + | chr4_2:63989152-63989171 | Msa0614850:CDS | 50.0% | |
| TGGTATCCTCAGCAGGACTT+TGG | + | chr4_2:63989384-63989403 | Msa0614850:CDS | 50.0% | |
| GGTATCCTCAGCAGGACTTT+GGG | + | chr4_2:63989385-63989404 | Msa0614850:CDS | 50.0% | |
| ACAGCTTCATGCCTCTTGTC+TGG | - | chr4_2:63989615-63989634 | None:intergenic | 50.0% | |
| CTTCCTTGAGACAAAGACGC+CGG | + | chr4_2:63989656-63989675 | Msa0614850:CDS | 50.0% | |
| CAGAAGTTGGATGAGCCTCA+GGG | + | chr4_2:63989780-63989799 | Msa0614850:CDS | 50.0% | |
| GTGATCAATTCAGAGAGGGC+AGG | - | chr4_2:63989882-63989901 | None:intergenic | 50.0% | |
| CAAAAATGCAGCCCCACACC+TGG | - | chr4_2:63987933-63987952 | None:intergenic | 55.0% | |
| AGCCCTGACTTCCATGGCAA+AGG | - | chr4_2:63989100-63989119 | None:intergenic | 55.0% | |
| TGACCGGCGTCTTTGTCTCA+AGG | - | chr4_2:63989662-63989681 | None:intergenic | 55.0% | |
| TGAGACAAAGACGCCGGTCA+TGG | + | chr4_2:63989662-63989681 | Msa0614850:CDS | 55.0% | |
| CCTGAGGCTCATCCAACTTC+TGG | - | chr4_2:63989782-63989801 | None:intergenic | 55.0% | |
| CCAGAAGTTGGATGAGCCTC+AGG | + | chr4_2:63989779-63989798 | Msa0614850:CDS | 55.0% | |
| CAGAAGGGAAGGCAGAACTG+AGG | - | chr4_2:63989995-63990014 | None:intergenic | 55.0% | |
| CTCAAGGTGACCGGCAAGCA+AGG | - | chr4_2:63988751-63988770 | None:intergenic | 60.0% | |
| GGGTTCAGCCCTGACTTCCA+TGG | - | chr4_2:63989106-63989125 | None:intergenic | 60.0% | |
| GAAGGCCCAAAGTCCTGCTG+AGG | - | chr4_2:63989393-63989412 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 63987711 | 63990236 | 63987711 | ID=Msa0614850;Name=Msa0614850 |
| chr4_2 | mRNA | 63987711 | 63990236 | 63987711 | ID=Msa0614850-mRNA-1;Parent=Msa0614850;Name=Msa0614850-mRNA-1;_AED=0.02;_eAED=0.02;_QI=103|1|1|1|1|1|2|217|701 |
| chr4_2 | exon | 63987711 | 63988808 | 63987711 | ID=Msa0614850-mRNA-1:exon:17940;Parent=Msa0614850-mRNA-1 |
| chr4_2 | exon | 63988909 | 63990236 | 63988909 | ID=Msa0614850-mRNA-1:exon:17941;Parent=Msa0614850-mRNA-1 |
| chr4_2 | five_prime_UTR | 63987711 | 63987813 | 63987711 | ID=Msa0614850-mRNA-1:five_prime_utr;Parent=Msa0614850-mRNA-1 |
| chr4_2 | CDS | 63987814 | 63988808 | 63987814 | ID=Msa0614850-mRNA-1:cds;Parent=Msa0614850-mRNA-1 |
| chr4_2 | CDS | 63988909 | 63990019 | 63988909 | ID=Msa0614850-mRNA-1:cds;Parent=Msa0614850-mRNA-1 |
| chr4_2 | three_prime_UTR | 63990020 | 63990236 | 63990020 | ID=Msa0614850-mRNA-1:three_prime_utr;Parent=Msa0614850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
