AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0615390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615390 MtrunA17_Chr4g0051821 94.241 191 11 0 1 191 148 338 7.48e-133 383
Msa0615390 MtrunA17_Chr4g0051681 86.316 190 26 0 2 191 151 340 4.75e-123 358
Msa0615390 MtrunA17_Chr4g0051731 85.263 190 28 0 2 191 126 315 5.58e-122 355
Msa0615390 MtrunA17_Chr4g0051711 84.211 190 30 0 2 191 149 338 5.32e-121 353
Msa0615390 MtrunA17_Chr4g0051761 85.263 190 28 0 2 191 171 360 2.59e-120 352
Msa0615390 MtrunA17_Chr4g0051701 79.227 207 41 1 2 208 150 354 7.25e-119 347
Msa0615390 MtrunA17_Chr6g0468791 80.000 190 38 0 2 191 147 336 7.39e-113 332
Msa0615390 MtrunA17_Chr6g0468811 80.526 190 37 0 2 191 149 338 9.02e-113 342
Msa0615390 MtrunA17_Chr4g0051791 79.167 168 22 1 2 169 37 191 2.79e-94 280
Msa0615390 MtrunA17_Chr1g0173761 61.058 208 78 2 2 208 144 349 7.77e-92 278
Msa0615390 MtrunA17_Chr2g0292611 59.048 210 86 0 2 211 163 372 2.97e-90 275
Msa0615390 MtrunA17_Chr1g0173751 62.827 191 70 1 2 191 144 334 1.56e-88 270
Msa0615390 MtrunA17_Chr2g0292621 63.158 190 70 0 2 191 144 333 3.65e-88 268
Msa0615390 MtrunA17_Chr2g0292581 59.162 191 77 1 2 191 144 334 1.33e-85 262
Msa0615390 MtrunA17_Chr8g0353201 40.609 197 100 4 2 191 147 333 1.06e-52 177
Msa0615390 MtrunA17_Chr1g0180281 39.899 198 103 3 1 191 151 339 1.11e-51 174
Msa0615390 MtrunA17_Chr1g0180271 39.899 198 103 3 1 191 151 339 1.20e-50 172
Msa0615390 MtrunA17_Chr6g0487311 37.379 206 108 5 2 191 147 347 5.17e-49 167
Msa0615390 MtrunA17_Chr6g0487401 37.056 197 87 4 2 191 179 345 4.65e-43 152
Msa0615390 MtrunA17_Chr6g0471901 40.278 144 74 3 2 138 147 285 4.63e-34 127
Msa0615390 MtrunA17_Chr2g0292641 66.667 84 28 0 108 191 1 84 3.11e-32 117
Msa0615390 MtrunA17_Chr1g0162771 42.105 76 36 2 1 69 146 220 4.56e-14 69.7
Msa0615390 MtrunA17_Chr2g0292631 74.286 35 9 0 2 36 144 178 1.97e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615390 AT5G61820.2 56.842 190 74 3 2 189 161 344 1.47e-74 236
Msa0615390 AT5G61820.1 56.842 190 74 3 2 189 161 344 1.47e-74 236

Find 115 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATTGGATCAACCCTATT+TGG 0.218256 4_2:+64859961 Msa0615390:CDS
TCCAGGTCCTAGCTCAAATT+TGG 0.222916 4_2:-64858840 None:intergenic
ATCAATATGTGTTCTGTATC+TGG 0.237455 4_2:+64858710 None:intergenic
TGCAAATTACCTGTCCAAAT+AGG 0.248029 4_2:-64859975 None:intergenic
CATTTCTCATCAAACCCTTC+TGG 0.291066 4_2:-64859211 None:intergenic
GCAAATTACCTGTCCAAATA+GGG 0.291489 4_2:-64859974 None:intergenic
GGAATTGGATCCACCCTATA+TGG 0.332124 4_2:+64864717 Msa0615390:CDS
TGGAAATTACCTGTCCATAT+AGG 0.336191 4_2:-64864731 None:intergenic
CATCAGCATTCAGGTGGAAT+TGG 0.339156 4_2:+64859946 Msa0615390:CDS
CATCAGCATTCAGGTGGAAT+TGG 0.345957 4_2:+64864702 Msa0615390:CDS
CCAGGTCCTAGCTCAAATTT+GGG 0.347633 4_2:-64858839 None:intergenic
GGAAATTACCTGTCCATATA+GGG 0.348859 4_2:-64864730 None:intergenic
GGTGTTGCTCATCAGCATTC+AGG 0.349404 4_2:+64859937 Msa0615390:CDS
TAAGTTTCATGGAGAGGTAT+AGG 0.349623 4_2:-64858959 None:intergenic
TGTCATTGTTCCTCGTGTTT+CGG 0.354160 4_2:-64859140 None:intergenic
GTGTTCTGTATCTGGAGTTT+TGG 0.356098 4_2:+64858718 None:intergenic
ATGAAACTTATCTCCATCAT+TGG 0.356421 4_2:+64858972 Msa0615390:five_prime_UTR
CTTGGACAATACTTTGGCCT+TGG 0.360005 4_2:+64859115 Msa0615390:five_prime_UTR
GGAAATCCTTGATTGCTATA+TGG 0.363550 4_2:-64858907 None:intergenic
GGTGTTGCACATCAGCATTC+AGG 0.372185 4_2:+64864693 Msa0615390:CDS
CTTAAGTAGAGGCTTCTCTT+TGG 0.373052 4_2:-64859421 None:intergenic
ACAAATATTCCCGACCCTTT+CGG 0.373087 4_2:+64859160 Msa0615390:CDS
CAGAAGGGTTTGATGAGAAA+TGG 0.376479 4_2:+64859212 Msa0615390:CDS
TTATGCAGATTACTCTAAAT+AGG 0.381916 4_2:-64865544 None:intergenic
ACTTAAGATACACTGTGAAA+TGG 0.386726 4_2:+64859437 Msa0615390:CDS
GCCAATCAGAAGCAGAAATA+TGG 0.387479 4_2:-64858753 None:intergenic
GCCATATTTCTGCTTCTGAT+TGG 0.388937 4_2:+64858752 Msa0615390:five_prime_UTR
AATGATGGAGATAAGTTTCA+TGG 0.396431 4_2:-64858970 None:intergenic
AATTATCTTGGACAATACTT+TGG 0.402914 4_2:+64859109 Msa0615390:five_prime_UTR
ACTGGTGGCTATGTGATCTA+TGG 0.406576 4_2:+64859916 Msa0615390:CDS
ACTGGTGGCTATGTGATCTA+TGG 0.406576 4_2:+64864672 Msa0615390:CDS
CGAGGCGCAGAGGATAAGTT+AGG 0.407543 4_2:+64859262 Msa0615390:CDS
TCCCGACCCTTTCGGTATAG+AGG 0.414156 4_2:+64859168 Msa0615390:CDS
AACCCTTCTGGAACCTCTGC+AGG 0.416819 4_2:-64859199 None:intergenic
ACATAGCCACCAGTTTGAAA+TGG 0.422102 4_2:-64859907 None:intergenic
ACATAGCCACCAGTTTGAAA+TGG 0.422102 4_2:-64864663 None:intergenic
CTTAAGATACACTGTGAAAT+GGG 0.428366 4_2:+64859438 Msa0615390:CDS
AACATACCTCCTTTATAATC+AGG 0.429519 4_2:-64859349 None:intergenic
CACTGTGAAATGGGTTGATT+GGG 0.431561 4_2:+64859447 Msa0615390:CDS
TTGAGTCTTGTATGTGTGAT+TGG 0.444540 4_2:+64865576 Msa0615390:CDS
CCCAAATTTGAGCTAGGACC+TGG 0.447991 4_2:+64858839 Msa0615390:five_prime_UTR
ACACTGTGAAATGGGTTGAT+TGG 0.451542 4_2:+64859446 Msa0615390:CDS
GCTGAAGTAGTTGATGAATC+TGG 0.451727 4_2:+64858932 Msa0615390:five_prime_UTR
TTGATTGCTATATGGCCTCT+TGG 0.451974 4_2:-64858899 None:intergenic
AAACCATCAGATGATTCAAA+AGG 0.456886 4_2:+64859523 Msa0615390:CDS
ATGTGAGCTTTATAATGTTA+CGG 0.459839 4_2:+64859300 Msa0615390:CDS
ATAGATCAAAAGGAGGGAAA+TGG 0.462491 4_2:+64859856 Msa0615390:CDS
TGAAACTTATCTCCATCATT+GGG 0.469217 4_2:+64858973 Msa0615390:five_prime_UTR
CATAGCCACCAGTTTGAAAT+GGG 0.475271 4_2:-64859906 None:intergenic
CATAGCCACCAGTTTGAAAT+GGG 0.475271 4_2:-64864662 None:intergenic
ACCTCTATACCGAAAGGGTC+GGG 0.481399 4_2:-64859169 None:intergenic
AAGAGGCCATATAGCAATCA+AGG 0.483603 4_2:+64858901 Msa0615390:five_prime_UTR
GAGAAACAGTGGCATATGCC+AGG 0.485091 4_2:+64859084 Msa0615390:five_prime_UTR
AGTAATCTGCATAATTATGC+AGG 0.485556 4_2:+64865553 Msa0615390:CDS
GATTGGAGAATGGCACAGTT+TGG 0.486571 4_2:+64865593 Msa0615390:CDS
ATCTTGCAGCATAGATCAAA+AGG 0.498222 4_2:+64859846 Msa0615390:CDS
ACAAGTCTCCCATTTCAAAC+TGG 0.501575 4_2:+64864654 Msa0615390:CDS
ATCTGATGGTTTCAAACTAT+CGG 0.502275 4_2:-64859512 None:intergenic
ATTGTCCAAGATAATTTCCC+TGG 0.503384 4_2:-64859102 None:intergenic
ACGAGTCTCCCATTTCAAAC+TGG 0.503871 4_2:+64859898 Msa0615390:CDS
TAGATCAAAAGGAGGGAAAT+GGG 0.508087 4_2:+64859857 Msa0615390:CDS
CAATGAATGTAGTAATTGTT+GGG 0.509326 4_2:+64865634 Msa0615390:CDS
ACAATGAATGTAGTAATTGT+TGG 0.510271 4_2:+64865633 Msa0615390:CDS
ATATGCCAGGGAAATTATCT+TGG 0.512816 4_2:+64859097 Msa0615390:five_prime_UTR
TATCTATTGATAACTGATCC+AGG 0.514983 4_2:-64858857 None:intergenic
TTCCTCGTGTTTCGGATCCA+AGG 0.515364 4_2:-64859132 None:intergenic
ACAAACCACAAGGAGCGAAA+TGG 0.515563 4_2:+64864612 Msa0615390:CDS
TCTGTAAGGCCTGATTATAA+AGG 0.516626 4_2:+64859340 Msa0615390:CDS
TGGATCAACCCTATTTGGAC+AGG 0.516849 4_2:+64859966 Msa0615390:CDS
TTATACACGGTGCAAGTTGA+AGG 0.522075 4_2:+64859384 Msa0615390:CDS
ATCTTGCAACAACCCAATGA+TGG 0.528507 4_2:-64858985 None:intergenic
CACAGCCATTTCGCTCCTTG+TGG 0.529057 4_2:-64864617 None:intergenic
TGATTCAAAAGGAATGAACT+TGG 0.529361 4_2:+64859534 Msa0615390:CDS
CTCTGCGCCTCGCGTATCGA+TGG 0.540451 4_2:-64859251 None:intergenic
ATGAGTACGGAAGGTCTGTA+AGG 0.543148 4_2:+64859326 Msa0615390:CDS
TCAATTATATATATCTTCAC+AGG 0.552378 4_2:-64859484 None:intergenic
TGGATCCACCCTATATGGAC+AGG 0.552599 4_2:+64864722 Msa0615390:CDS
AATGTTACGGTGGATGAGTA+CGG 0.555421 4_2:+64859313 Msa0615390:CDS
TCACAGTGTATCTTAAGTAG+AGG 0.563546 4_2:-64859432 None:intergenic
TACCTACCTCTATACCGAAA+GGG 0.564758 4_2:-64859174 None:intergenic
ATGGCTGTGTTAATGTAAAG+AGG 0.565801 4_2:+64864631 Msa0615390:CDS
GAGGCGCAGAGGATAAGTTA+GGG 0.580468 4_2:+64859263 Msa0615390:CDS
GAACTTGGATCATGATTGCA+AGG 0.584376 4_2:+64859549 Msa0615390:CDS
TACCTCTATACCGAAAGGGT+CGG 0.589870 4_2:-64859170 None:intergenic
AGGGTTTGATGAGAAATGGA+TGG 0.599666 4_2:+64859216 Msa0615390:CDS
GTAAGGCCTGATTATAAAGG+AGG 0.612982 4_2:+64859343 Msa0615390:CDS
TTACCTACCTCTATACCGAA+AGG 0.617901 4_2:-64859175 None:intergenic
TTGTATGTGTGATTGGAGAA+TGG 0.621583 4_2:+64865583 Msa0615390:CDS
TGCAGCATAGATCAAAAGGA+GGG 0.622581 4_2:+64859850 Msa0615390:CDS
ACACAGAAAATGATAGCCAC+AGG 0.622628 4_2:+64859032 Msa0615390:five_prime_UTR
TTGCAGCATAGATCAAAAGG+AGG 0.629566 4_2:+64859849 Msa0615390:CDS
TGGAGATAAGTTTCATGGAG+AGG 0.630553 4_2:-64858965 None:intergenic
AGTCTCCCATTTCAAACTGG+TGG 0.630697 4_2:+64859901 Msa0615390:CDS
AGTCTCCCATTTCAAACTGG+TGG 0.630697 4_2:+64864657 Msa0615390:CDS
AGAAACAGTGGCATATGCCA+GGG 0.631595 4_2:+64859085 Msa0615390:five_prime_UTR
AATTACCTGTCCATATAGGG+TGG 0.632679 4_2:-64864727 None:intergenic
CATCGATACGCGAGGCGCAG+AGG 0.633597 4_2:+64859252 Msa0615390:CDS
ATCTTGCAGCACAAACCACA+AGG 0.636798 4_2:+64864602 Msa0615390:CDS
ATTCATCAACTACTTCAGCA+TGG 0.638979 4_2:-64858928 None:intergenic
ATGGGTGTGTTCATGTGAAG+AGG 0.639376 4_2:+64859875 Msa0615390:CDS
GTTGCTCATCAGCATTCAGG+TGG 0.640887 4_2:+64859940 Msa0615390:CDS
AATCCTGCAGAGGTTCCAGA+AGG 0.641895 4_2:+64859196 Msa0615390:CDS
TTCACAAAAGAACTTGAGCA+TGG 0.643428 4_2:-64858779 None:intergenic
GTTGCACATCAGCATTCAGG+TGG 0.648323 4_2:+64864696 Msa0615390:CDS
GGCCTTGGATCCGAAACACG+AGG 0.659961 4_2:+64859130 Msa0615390:five_prime_UTR
TTACGGTGGATGAGTACGGA+AGG 0.664660 4_2:+64859317 Msa0615390:CDS
AGAGGTAGGTAATCCTGCAG+AGG 0.665825 4_2:+64859186 Msa0615390:CDS
GACCCTTTCGGTATAGAGGT+AGG 0.670260 4_2:+64859172 Msa0615390:CDS
CAGGTCCTAGCTCAAATTTG+GGG 0.677421 4_2:-64858838 None:intergenic
ATCCTGCAGAGGTTCCAGAA+GGG 0.684853 4_2:+64859197 Msa0615390:CDS
CATGTACTTGTGAGAAACAG+TGG 0.687414 4_2:+64859073 Msa0615390:five_prime_UTR
AGGTCCTAGCTCAAATTTGG+GGG 0.688231 4_2:-64858837 None:intergenic
GTTCATGCCATCGATACGCG+AGG 0.692765 4_2:+64859244 Msa0615390:CDS
TATGTTGTTATGATTATACA+CGG 0.718777 4_2:+64859371 Msa0615390:CDS
TGAGCTTTATAATGTTACGG+TGG 0.743392 4_2:+64859303 Msa0615390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATTTTATTAATTA+TGG + chr4_2:64862684-64862703 Msa0615390:intron 0.0%
!!! TATAGTAATTTTTAAATACT+TGG + chr4_2:64860019-64860038 Msa0615390:intron 10.0%
!!! AAACATTTTGTTTTATTTTT+AGG + chr4_2:64861876-64861895 Msa0615390:intron 10.0%
!!! AACATTTTGTTTTATTTTTA+GGG + chr4_2:64861877-64861896 Msa0615390:intron 10.0%
!!! TTTTATTTTATTAATTATGG+TGG + chr4_2:64862687-64862706 Msa0615390:intron 10.0%
!!! ATTACTAATATATATTTTTC+TGG + chr4_2:64863401-64863420 Msa0615390:intron 10.0%
!!! TAATTTTTAAATACTTGGAA+GGG + chr4_2:64860024-64860043 Msa0615390:intron 15.0%
!!! AAATATAATGTTTAACTTCT+GGG - chr4_2:64860300-64860319 None:intergenic 15.0%
!!! GAAAAACAAATTTGTATTTT+TGG + chr4_2:64860793-64860812 Msa0615390:intron 15.0%
!! ATATATGAAACAAAAAATAG+TGG - chr4_2:64860825-64860844 None:intergenic 15.0%
!!! ACTATTTTTTGTTTCATATA+TGG + chr4_2:64860824-64860843 Msa0615390:intron 15.0%
!!! ACATTTTGTTTTATATTGTA+TGG - chr4_2:64861630-64861649 None:intergenic 15.0%
!! TTAATCCTATAAAAATATAG+AGG + chr4_2:64861942-64861961 Msa0615390:intron 15.0%
!! TAATCCTATAAAAATATAGA+GGG + chr4_2:64861943-64861962 Msa0615390:intron 15.0%
!!! ATTCTTTTCATTATAAATCA+TGG - chr4_2:64862516-64862535 None:intergenic 15.0%
!!! CGTTCTATTTTTTTTTTTTA+AGG - chr4_2:64862550-64862569 None:intergenic 15.0%
!! AATAAAAAATAAACAAAGTG+AGG - chr4_2:64862674-64862693 None:intergenic 15.0%
!!! AAATGTATTATTTTCACAAA+AGG - chr4_2:64863334-64863353 None:intergenic 15.0%
!! TCAATTATATATATCTTAAC+AGG - chr4_2:64864201-64864220 None:intergenic 15.0%
!! TATAATCTATCTTTAACTAA+TGG - chr4_2:64864754-64864773 None:intergenic 15.0%
!! TATACTAATTCTTAAATAGT+TGG + chr4_2:64864770-64864789 Msa0615390:intron 15.0%
!! TACTTATATGATAATATAAC+TGG + chr4_2:64865358-64865377 Msa0615390:intron 15.0%
!! TATGTTGTTATGATTATACA+CGG + chr4_2:64859371-64859390 Msa0615390:CDS 20.0%
!! TCAATTATATATATCTTCAC+AGG - chr4_2:64859487-64859506 None:intergenic 20.0%
!! AGATAAACAAACAATGAATA+TGG - chr4_2:64859720-64859739 None:intergenic 20.0%
!!! GTAATTTTTAAATACTTGGA+AGG + chr4_2:64860023-64860042 Msa0615390:intron 20.0%
!! AAAAAATGTCAATATTGTCT+CGG - chr4_2:64860149-64860168 None:intergenic 20.0%
!! ATGTTTAATAAAGAAGAGAA+TGG + chr4_2:64860226-64860245 Msa0615390:intron 20.0%
!!! CAAATATAATGTTTAACTTC+TGG - chr4_2:64860301-64860320 None:intergenic 20.0%
!!! AAAATTTTTGTCTTGGAAAT+GGG - chr4_2:64861389-64861408 None:intergenic 20.0%
!!! TAAAATTTTTGTCTTGGAAA+TGG - chr4_2:64861390-64861409 None:intergenic 20.0%
!!! ACGAAATAAAATTTTTGTCT+TGG - chr4_2:64861396-64861415 None:intergenic 20.0%
!!! CAAAATTCACAGTATTTTTA+GGG - chr4_2:64861599-64861618 None:intergenic 20.0%
!!! TCAAAATTCACAGTATTTTT+AGG - chr4_2:64861600-64861619 None:intergenic 20.0%
!! AAAATGAAACTAGAAACTTT+GGG - chr4_2:64861662-64861681 None:intergenic 20.0%
!! AAAAATGAAACTAGAAACTT+TGG - chr4_2:64861663-64861682 None:intergenic 20.0%
!!! GTTTCATTTTTAGTTCTTAA+TGG + chr4_2:64861672-64861691 Msa0615390:intron 20.0%
!! ATTATGTTAAAGAAATGTCA+AGG - chr4_2:64861714-64861733 None:intergenic 20.0%
!! GACATTTCTTTAACATAATA+TGG + chr4_2:64861715-64861734 Msa0615390:intron 20.0%
!! TATAATTGATTGACATAACT+TGG + chr4_2:64861754-64861773 Msa0615390:intron 20.0%
!! ATAATTGATTGACATAACTT+GGG + chr4_2:64861755-64861774 Msa0615390:intron 20.0%
!!! GTTTTGTTTTTTGTACATAA+TGG - chr4_2:64861836-64861855 None:intergenic 20.0%
!! TTATGTACAAAAAACAAAAC+AGG + chr4_2:64861836-64861855 Msa0615390:intron 20.0%
!!! GTTTTTTAGAAACATGAAAT+AGG - chr4_2:64862984-64863003 None:intergenic 20.0%
!! AATTAAGCTTACAATAAACA+AGG - chr4_2:64863250-64863269 None:intergenic 20.0%
!! TATTACATGAACAAATAGAA+GGG - chr4_2:64864873-64864892 None:intergenic 20.0%
!!! TTGCTTGTTAATTAAACATT+TGG - chr4_2:64864913-64864932 None:intergenic 20.0%
!! ATGTTTAATTAACAAGCAAA+TGG + chr4_2:64864914-64864933 Msa0615390:intron 20.0%
!! TACTAGAAAAAGCAAAATTA+GGG + chr4_2:64865403-64865422 Msa0615390:intron 20.0%
!!! TATGATATTGATTTTCCAAG+AGG + chr4_2:64858884-64858903 Msa0615390:five_prime_UTR 25.0%
! AATTATCTTGGACAATACTT+TGG + chr4_2:64859109-64859128 Msa0615390:five_prime_UTR 25.0%
!! ATGTGAGCTTTATAATGTTA+CGG + chr4_2:64859300-64859319 Msa0615390:CDS 25.0%
!!! GAAACATTTAGTTTGTAGAA+TGG + chr4_2:64859588-64859607 Msa0615390:intron 25.0%
!!! AGAGTATTTTCTCAATTACT+CGG - chr4_2:64859617-64859636 None:intergenic 25.0%
!! AACATAGATTTCTTTGTTTC+AGG + chr4_2:64859807-64859826 Msa0615390:intron 25.0%
!!! TCAATTATTTTAACAGAACC+TGG - chr4_2:64860468-64860487 None:intergenic 25.0%
! GGTTCTGTTAAAATAATTGA+TGG + chr4_2:64860468-64860487 Msa0615390:intron 25.0%
! AAGATGAATAAAGACATGAT+TGG + chr4_2:64860718-64860737 Msa0615390:intron 25.0%
! AATAAAGACATGATTGGAAA+GGG + chr4_2:64860724-64860743 Msa0615390:intron 25.0%
!!! CAGTTATTGTCTTTTGAAAT+CGG + chr4_2:64860984-64861003 Msa0615390:intron 25.0%
!! AAATTTTTGTCTTGGAAATG+GGG - chr4_2:64861388-64861407 None:intergenic 25.0%
! AGTAATGTGCAATCAAAATA+TGG - chr4_2:64862158-64862177 None:intergenic 25.0%
!!! CGATATTTGAGTTTTAATGT+GGG - chr4_2:64862413-64862432 None:intergenic 25.0%
!!! TCGATATTTGAGTTTTAATG+TGG - chr4_2:64862414-64862433 None:intergenic 25.0%
!!! CAAGTGATTTTTTAAAGTGA+TGG - chr4_2:64862577-64862596 None:intergenic 25.0%
! AACATACTACATAGAACTTA+AGG + chr4_2:64862892-64862911 Msa0615390:intron 25.0%
! ACATACTACATAGAACTTAA+GGG + chr4_2:64862893-64862912 Msa0615390:intron 25.0%
!! CATGTTTCTAAAAAACATGT+TGG + chr4_2:64862988-64863007 Msa0615390:intron 25.0%
! TTGGTCATAAGTTTATGTTA+AGG + chr4_2:64863007-64863026 Msa0615390:intron 25.0%
! ATTTGTGTAGTTCATTCATT+TGG + chr4_2:64863150-64863169 Msa0615390:intron 25.0%
! AGGCACATCAATATTAAAAA+GGG - chr4_2:64863204-64863223 None:intergenic 25.0%
! AGCTTAATTCAATTCATCAA+AGG + chr4_2:64863261-64863280 Msa0615390:intron 25.0%
! AATTTCAAAGTAGTCTTCTT+AGG - chr4_2:64863290-64863309 None:intergenic 25.0%
! TTCAAAAAAGAACTTAAGCA+TGG - chr4_2:64863496-64863515 None:intergenic 25.0%
!!! TATGATATTGATTTTCCAAG+AGG + chr4_2:64858884-64858903 Msa0615390:five_prime_UTR 25.0%
!! ATCTAAGATACACAGTAAAA+TGG + chr4_2:64864151-64864170 Msa0615390:intron 25.0%
!! TCTAAGATACACAGTAAAAT+GGG + chr4_2:64864152-64864171 Msa0615390:intron 25.0%
! ATCTGATAGTTTCAAAGTAT+CGG - chr4_2:64864229-64864248 None:intergenic 25.0%
! AAACTATCAGATAACTCAAA+AGG + chr4_2:64864237-64864256 Msa0615390:intron 25.0%
!! TTTATATTTTGTGAACTGAC+TGG - chr4_2:64864344-64864363 None:intergenic 25.0%
! AGACAAACAAACTACAAATT+TGG - chr4_2:64864485-64864504 None:intergenic 25.0%
! GATTAAAGATGTATATGAGT+CGG + chr4_2:64864809-64864828 Msa0615390:intron 25.0%
! CTATTACATGAACAAATAGA+AGG - chr4_2:64860186-64860205 None:intergenic 25.0%
!! CATGTAATAGTTTTCAATTG+AGG + chr4_2:64864884-64864903 Msa0615390:intron 25.0%
! AAATTGTGTTTCATGATTTC+AGG + chr4_2:64865041-64865060 Msa0615390:intron 25.0%
!!! TACTCGTTCTTCATTTTTTA+TGG + chr4_2:64865305-64865324 Msa0615390:intron 25.0%
! CTACTAGAAAAAGCAAAATT+AGG + chr4_2:64865402-64865421 Msa0615390:intron 25.0%
! AAGGTTTATTTATTTCAGTG+TGG + chr4_2:64865486-64865505 Msa0615390:intron 25.0%
! TTATGCAGATTACTCTAAAT+AGG - chr4_2:64865547-64865566 None:intergenic 25.0%
! ACAATGAATGTAGTAATTGT+TGG + chr4_2:64865633-64865652 Msa0615390:CDS 25.0%
! CAATGAATGTAGTAATTGTT+GGG + chr4_2:64865634-64865653 Msa0615390:CDS 25.0%
!! TGGAGTTTTGGTATTTTCAT+TGG + chr4_2:64858730-64858749 Msa0615390:five_prime_UTR 30.0%
! TATCTATTGATAACTGATCC+AGG - chr4_2:64858860-64858879 None:intergenic 30.0%
! AATGATGGAGATAAGTTTCA+TGG - chr4_2:64858973-64858992 None:intergenic 30.0%
ATGAAACTTATCTCCATCAT+TGG + chr4_2:64858972-64858991 Msa0615390:five_prime_UTR 30.0%
TGAAACTTATCTCCATCATT+GGG + chr4_2:64858973-64858992 Msa0615390:five_prime_UTR 30.0%
AACATACCTCCTTTATAATC+AGG - chr4_2:64859352-64859371 None:intergenic 30.0%
! AAGTTGAAGGAAGATTTTGA+AGG + chr4_2:64859397-64859416 Msa0615390:CDS 30.0%
ACTTAAGATACACTGTGAAA+TGG + chr4_2:64859437-64859456 Msa0615390:CDS 30.0%
CTTAAGATACACTGTGAAAT+GGG + chr4_2:64859438-64859457 Msa0615390:CDS 30.0%
ATCTGATGGTTTCAAACTAT+CGG - chr4_2:64859515-64859534 None:intergenic 30.0%
AAACCATCAGATGATTCAAA+AGG + chr4_2:64859523-64859542 Msa0615390:CDS 30.0%
! ATTCCTTTTGAATCATCTGA+TGG - chr4_2:64859529-64859548 None:intergenic 30.0%
TGATTCAAAAGGAATGAACT+TGG + chr4_2:64859534-64859553 Msa0615390:CDS 30.0%
TGCTATATTGGGTGTAAATA+TGG - chr4_2:64860086-64860105 None:intergenic 30.0%
! ATGTAATAGTTTTCGATCGA+GGG + chr4_2:64860197-64860216 Msa0615390:intron 30.0%
!!! AGCTTGTTTTGTGAAATTTG+TGG + chr4_2:64860327-64860346 Msa0615390:intron 30.0%
TGTTCTTCTATACCAAGTTA+TGG + chr4_2:64860378-64860397 Msa0615390:intron 30.0%
TCTATACCAAGTTATGGAAA+TGG + chr4_2:64860384-64860403 Msa0615390:intron 30.0%
!! ATTTTAACAGAACCTGGTTT+AGG - chr4_2:64860462-64860481 None:intergenic 30.0%
AAAGACTGAGTTGTTGATAT+GGG - chr4_2:64860584-64860603 None:intergenic 30.0%
AAAAGACTGAGTTGTTGATA+TGG - chr4_2:64860585-64860604 None:intergenic 30.0%
!!! CTTTTTTCTCGTTCTTCTTT+TGG + chr4_2:64860600-64860619 Msa0615390:intron 30.0%
CTATAATACCATCAATGACA+CGG - chr4_2:64860677-64860696 None:intergenic 30.0%
GAATAAAGACATGATTGGAA+AGG + chr4_2:64860723-64860742 Msa0615390:intron 30.0%
ATGAAAGAATCAGAGAAAGA+AGG + chr4_2:64860887-64860906 Msa0615390:intron 30.0%
ACTGAGAAACAGAGTTATTA+TGG - chr4_2:64860968-64860987 None:intergenic 30.0%
!!! CTTTCTATTGTTTTTGCGTT+CGG - chr4_2:64861065-64861084 None:intergenic 30.0%
! TGTTAATAGGAGGATTTTTG+TGG - chr4_2:64861272-64861291 None:intergenic 30.0%
CAATAGAATCTTGAACAATG+AGG - chr4_2:64861443-64861462 None:intergenic 30.0%
TAACTGAAATGCTAGAAAAC+CGG + chr4_2:64861536-64861555 Msa0615390:intron 30.0%
TAATATGGTCATATGTGAGT+TGG + chr4_2:64861730-64861749 Msa0615390:intron 30.0%
! ACAAAACAGGAAATTTTGAG+AGG + chr4_2:64861849-64861868 Msa0615390:intron 30.0%
!! CACTCCCTCTATATTTTTAT+AGG - chr4_2:64861950-64861969 None:intergenic 30.0%
ATCAAAATATGGTAAGGTCA+AGG - chr4_2:64862147-64862166 None:intergenic 30.0%
TGTGCAATCAAAATATGGTA+AGG - chr4_2:64862153-64862172 None:intergenic 30.0%
TTACAAAGAACTTGAAGTTC+GGG - chr4_2:64862193-64862212 None:intergenic 30.0%
CTTACAAAGAACTTGAAGTT+CGG - chr4_2:64862194-64862213 None:intergenic 30.0%
TCCATGATATTTGTGAGAAA+AGG + chr4_2:64862315-64862334 Msa0615390:intron 30.0%
CCATGATATTTGTGAGAAAA+GGG + chr4_2:64862316-64862335 Msa0615390:intron 30.0%
ACTCAAATATCGAGTTTAGT+CGG + chr4_2:64862421-64862440 Msa0615390:intron 30.0%
AAAATGGCTGTAATACATCA+TGG + chr4_2:64862722-64862741 Msa0615390:intron 30.0%
!!! TGCTGTTGTTTTTATATGCT+GGG - chr4_2:64862752-64862771 None:intergenic 30.0%
!!! ATGCTGTTGTTTTTATATGC+TGG - chr4_2:64862753-64862772 None:intergenic 30.0%
GTAGTATGTTGTAATCTTTG+TGG - chr4_2:64862882-64862901 None:intergenic 30.0%
TAATGTTGTGACTACTATTG+TGG - chr4_2:64863052-64863071 None:intergenic 30.0%
! TAGTTCATTCATTTGGTGAA+TGG + chr4_2:64863157-64863176 Msa0615390:intron 30.0%
AGGGTAACAATATATACTGT+GGG - chr4_2:64863185-64863204 None:intergenic 30.0%
AAGGGTAACAATATATACTG+TGG - chr4_2:64863186-64863205 None:intergenic 30.0%
CAGGCACATCAATATTAAAA+AGG - chr4_2:64863205-64863224 None:intergenic 30.0%
TTCACAAAAGGTAAATCAAG+AGG - chr4_2:64863322-64863341 None:intergenic 30.0%
! ACCTAAGTTTGTATTTTCAG+TGG + chr4_2:64863444-64863463 Msa0615390:intron 30.0%
! TCTTTATTGATAACTGATCC+AGG - chr4_2:64863574-64863593 None:intergenic 30.0%
! AATGATGGAGATAAGTTTCA+TGG - chr4_2:64858973-64858992 None:intergenic 30.0%
ATGAAACTTATCTCCATCAT+TGG + chr4_2:64858972-64858991 Msa0615390:five_prime_UTR 30.0%
TGAAACTTATCTCCATCATT+GGG + chr4_2:64858973-64858992 Msa0615390:five_prime_UTR 30.0%
AATACTCTTGGACAATACTT+TGG + chr4_2:64863823-64863842 Msa0615390:intron 30.0%
ATGAATATGGAAGGTCTATA+AGG + chr4_2:64864040-64864059 Msa0615390:intron 30.0%
TCTATAAGGCCAGATTATAA+AGG + chr4_2:64864054-64864073 Msa0615390:intron 30.0%
TTACTGTGTATCTTAGATAG+AGG - chr4_2:64864149-64864168 None:intergenic 30.0%
ATATAACACTAGTCCATTGT+TGG + chr4_2:64864526-64864545 Msa0615390:intron 30.0%
TATAACACTAGTCCATTGTT+GGG + chr4_2:64864527-64864546 Msa0615390:intron 30.0%
!! TGCTTGTTTTCATTGTATAC+TGG + chr4_2:64864967-64864986 Msa0615390:intron 30.0%
TAGAAAAAGCAAAATTAGGG+AGG + chr4_2:64865406-64865425 Msa0615390:intron 30.0%
ACAAATTTCCTCGTTGTAAA+TGG + chr4_2:64865460-64865479 Msa0615390:intron 30.0%
AGTAATCTGCATAATTATGC+AGG + chr4_2:64865553-64865572 Msa0615390:CDS 30.0%
TTCACAAAAGAACTTGAGCA+TGG - chr4_2:64858782-64858801 None:intergenic 35.0%
GGAAATCCTTGATTGCTATA+TGG - chr4_2:64858910-64858929 None:intergenic 35.0%
ATTCATCAACTACTTCAGCA+TGG - chr4_2:64858931-64858950 None:intergenic 35.0%
! TAAGTTTCATGGAGAGGTAT+AGG - chr4_2:64858962-64858981 None:intergenic 35.0%
ATATGCCAGGGAAATTATCT+TGG + chr4_2:64859097-64859116 Msa0615390:five_prime_UTR 35.0%
ATTGTCCAAGATAATTTCCC+TGG - chr4_2:64859105-64859124 None:intergenic 35.0%
! TGAGCTTTATAATGTTACGG+TGG + chr4_2:64859303-64859322 Msa0615390:CDS 35.0%
TCTGTAAGGCCTGATTATAA+AGG + chr4_2:64859340-64859359 Msa0615390:CDS 35.0%
TCACAGTGTATCTTAAGTAG+AGG - chr4_2:64859435-64859454 None:intergenic 35.0%
ATCTTGCAGCATAGATCAAA+AGG + chr4_2:64859846-64859865 Msa0615390:CDS 35.0%
ATAGATCAAAAGGAGGGAAA+TGG + chr4_2:64859856-64859875 Msa0615390:CDS 35.0%
TAGATCAAAAGGAGGGAAAT+GGG + chr4_2:64859857-64859876 Msa0615390:CDS 35.0%
GCAAATTACCTGTCCAAATA+GGG - chr4_2:64859977-64859996 None:intergenic 35.0%
TGCAAATTACCTGTCCAAAT+AGG - chr4_2:64859978-64859997 None:intergenic 35.0%
TCAAGTGTCAGTGCTATATT+GGG - chr4_2:64860097-64860116 None:intergenic 35.0%
TAAAGATGTGTAACACGTGT+CGG + chr4_2:64860120-64860139 Msa0615390:intron 35.0%
! CATGTAATAGTTTTCGATCG+AGG + chr4_2:64860196-64860215 Msa0615390:intron 35.0%
!! TGTGGATTATGTTTTCAGCA+TGG + chr4_2:64860345-64860364 Msa0615390:intron 35.0%
!! GTGGATTATGTTTTCAGCAT+GGG + chr4_2:64860346-64860365 Msa0615390:intron 35.0%
! ATTATGTTTTCAGCATGGGA+GGG + chr4_2:64860350-64860369 Msa0615390:intron 35.0%
AATGAATCAGGCTACATTGT+AGG + chr4_2:64860420-64860439 Msa0615390:intron 35.0%
TTGTGTATTCAGCTAGCTAT+AGG + chr4_2:64860769-64860788 Msa0615390:intron 35.0%
TACATGGTAGAACAAACTTC+TGG - chr4_2:64860855-64860874 None:intergenic 35.0%
TTCTACCATGTAACAACTGT+GGG + chr4_2:64860863-64860882 Msa0615390:intron 35.0%
AATCAGAGAAAGAAGGATTG+TGG + chr4_2:64860894-64860913 Msa0615390:intron 35.0%
ATCAGAGAAAGAAGGATTGT+GGG + chr4_2:64860895-64860914 Msa0615390:intron 35.0%
AAAAAATGTAGCACTCACAC+AGG + chr4_2:64861019-64861038 Msa0615390:intron 35.0%
!!! TTGTTTTTGCGTTCGGTATT+GGG - chr4_2:64861058-64861077 None:intergenic 35.0%
!!! ATTGTTTTTGCGTTCGGTAT+TGG - chr4_2:64861059-64861078 None:intergenic 35.0%
CGAACGCAAAAACAATAGAA+AGG + chr4_2:64861063-64861082 Msa0615390:intron 35.0%
TATTTGGCACACAACCATTT+GGG - chr4_2:64861485-64861504 None:intergenic 35.0%
TTATTTGGCACACAACCATT+TGG - chr4_2:64861486-64861505 None:intergenic 35.0%
AACTGAAATGCTAGAAAACC+GGG + chr4_2:64861537-64861556 Msa0615390:intron 35.0%
ATGAAACTAGAAACTTTGGG+AGG - chr4_2:64861659-64861678 None:intergenic 35.0%
GGGCATATCTTGAACATAAA+AGG + chr4_2:64861775-64861794 Msa0615390:intron 35.0%
AGAATTCTGCTTGTAGTGTA+AGG - chr4_2:64862029-64862048 None:intergenic 35.0%
! CGAACTTCAAGTTCTTTGTA+AGG + chr4_2:64862192-64862211 Msa0615390:intron 35.0%
! CCCTTTTCTCACAAATATCA+TGG - chr4_2:64862319-64862338 None:intergenic 35.0%
AACTTAACCCTGGTTATAAC+CGG - chr4_2:64862644-64862663 None:intergenic 35.0%
AGGTTTAACTAACTTAACCC+TGG - chr4_2:64862654-64862673 None:intergenic 35.0%
ATCTCCAAACTATCTTTCTG+AGG + chr4_2:64862918-64862937 Msa0615390:intron 35.0%
TGTACCTCAGAAAGATAGTT+TGG - chr4_2:64862925-64862944 None:intergenic 35.0%
TAGAAGAGAAGATCATGGAA+TGG - chr4_2:64862957-64862976 None:intergenic 35.0%
ACAGAATTTGCAAATTGCAC+AGG - chr4_2:64863224-64863243 None:intergenic 35.0%
GCCACTGAAAATACAAACTT+AGG - chr4_2:64863448-64863467 None:intergenic 35.0%
GCAATACTTCTGCTATTGTT+TGG + chr4_2:64863466-64863485 Msa0615390:intron 35.0%
! TAAGTTTCATGGAGAGGTAT+AGG - chr4_2:64858962-64858981 None:intergenic 35.0%
GAAACTTATCTCCATCATTG+GGG + chr4_2:64858974-64858993 Msa0615390:five_prime_UTR 35.0%
GTTCTGATATTGTGAAAGTG+AGG + chr4_2:64863779-64863798 Msa0615390:intron 35.0%
ATATGTCAGGGAAATACTCT+TGG + chr4_2:64863811-64863830 Msa0615390:intron 35.0%
TTACCTATCTCTATACCGAA+AGG - chr4_2:64863892-64863911 None:intergenic 35.0%
ATTAAGCACCCATTTATCCT+CGG - chr4_2:64863938-64863957 None:intergenic 35.0%
! GTGCGAGCTTTATAATGTTA+CGG + chr4_2:64864014-64864033 Msa0615390:intron 35.0%
AATGTTACGGTGGATGAATA+TGG + chr4_2:64864027-64864046 Msa0615390:intron 35.0%
ATAAGGCCAGATTATAAAGG+AGG + chr4_2:64864057-64864076 Msa0615390:intron 35.0%
AACCAACCTCCTTTATAATC+TGG - chr4_2:64864066-64864085 None:intergenic 35.0%
!! AAGTTGAAGGAAGGTTTTGA+GGG + chr4_2:64864111-64864130 Msa0615390:intron 35.0%
!! ACACAGTAAAATGGGTTGAT+TGG + chr4_2:64864160-64864179 Msa0615390:intron 35.0%
!! CACAGTAAAATGGGTTGATT+GGG + chr4_2:64864161-64864180 Msa0615390:intron 35.0%
GTCAATGCATCAATGAATGT+TGG + chr4_2:64864311-64864330 Msa0615390:intron 35.0%
! AGATTTCAAGCTCGGTATTT+TGG - chr4_2:64864390-64864409 None:intergenic 35.0%
AAATACCGAGCTTGAAATCT+AGG + chr4_2:64864390-64864409 Msa0615390:intron 35.0%
CTCATTATGATACCCAACAA+TGG - chr4_2:64864542-64864561 None:intergenic 35.0%
ATGGCTGTGTTAATGTAAAG+AGG + chr4_2:64864631-64864650 Msa0615390:CDS 35.0%
GGAAATTACCTGTCCATATA+GGG - chr4_2:64864733-64864752 None:intergenic 35.0%
TGGAAATTACCTGTCCATAT+AGG - chr4_2:64864734-64864753 None:intergenic 35.0%
GTGTGAATAATTAGCAGTTG+AGG + chr4_2:64864936-64864955 Msa0615390:intron 35.0%
AATTAGCAGTTGAGGACTAT+CGG + chr4_2:64864944-64864963 Msa0615390:intron 35.0%
TGTGTTTCATGATTTCAGGA+TGG + chr4_2:64865045-64865064 Msa0615390:intron 35.0%
GTGTTTCATGATTTCAGGAT+GGG + chr4_2:64865046-64865065 Msa0615390:intron 35.0%
!! TCAACTTGTTATCCTAAACC+AGG + chr4_2:64865147-64865166 Msa0615390:intron 35.0%
TTCACCATCAATTATCGTGA+CGG - chr4_2:64865175-64865194 None:intergenic 35.0%
TTAGGGAGGAAAATTAGTGA+CGG + chr4_2:64865420-64865439 Msa0615390:intron 35.0%
TTACAACGAGGAAATTTGTG+AGG - chr4_2:64865459-64865478 None:intergenic 35.0%
! TTGAGTCTTGTATGTGTGAT+TGG + chr4_2:64865576-64865595 Msa0615390:CDS 35.0%
TTGTATGTGTGATTGGAGAA+TGG + chr4_2:64865583-64865602 Msa0615390:CDS 35.0%
! GCCATATTTCTGCTTCTGAT+TGG + chr4_2:64858752-64858771 Msa0615390:five_prime_UTR 40.0%
GCCAATCAGAAGCAGAAATA+TGG - chr4_2:64858756-64858775 None:intergenic 40.0%
TTGATTGCTATATGGCCTCT+TGG - chr4_2:64858902-64858921 None:intergenic 40.0%
AAGAGGCCATATAGCAATCA+AGG + chr4_2:64858901-64858920 Msa0615390:five_prime_UTR 40.0%
!! GCTGAAGTAGTTGATGAATC+TGG + chr4_2:64858932-64858951 Msa0615390:five_prime_UTR 40.0%
TGGAGATAAGTTTCATGGAG+AGG - chr4_2:64858968-64858987 None:intergenic 40.0%
ATCTTGCAACAACCCAATGA+TGG - chr4_2:64858988-64859007 None:intergenic 40.0%
ACACAGAAAATGATAGCCAC+AGG + chr4_2:64859032-64859051 Msa0615390:five_prime_UTR 40.0%
CATGTACTTGTGAGAAACAG+TGG + chr4_2:64859073-64859092 Msa0615390:five_prime_UTR 40.0%
TGTCATTGTTCCTCGTGTTT+CGG - chr4_2:64859143-64859162 None:intergenic 40.0%
ACAAATATTCCCGACCCTTT+CGG + chr4_2:64859160-64859179 Msa0615390:CDS 40.0%
TACCTACCTCTATACCGAAA+GGG - chr4_2:64859177-64859196 None:intergenic 40.0%
TTACCTACCTCTATACCGAA+AGG - chr4_2:64859178-64859197 None:intergenic 40.0%
CATTTCTCATCAAACCCTTC+TGG - chr4_2:64859214-64859233 None:intergenic 40.0%
CAGAAGGGTTTGATGAGAAA+TGG + chr4_2:64859212-64859231 Msa0615390:CDS 40.0%
AGGGTTTGATGAGAAATGGA+TGG + chr4_2:64859216-64859235 Msa0615390:CDS 40.0%
AATGTTACGGTGGATGAGTA+CGG + chr4_2:64859313-64859332 Msa0615390:CDS 40.0%
GTAAGGCCTGATTATAAAGG+AGG + chr4_2:64859343-64859362 Msa0615390:CDS 40.0%
! TTATACACGGTGCAAGTTGA+AGG + chr4_2:64859384-64859403 Msa0615390:CDS 40.0%
CTTAAGTAGAGGCTTCTCTT+TGG - chr4_2:64859424-64859443 None:intergenic 40.0%
!! ACACTGTGAAATGGGTTGAT+TGG + chr4_2:64859446-64859465 Msa0615390:CDS 40.0%
!! CACTGTGAAATGGGTTGATT+GGG + chr4_2:64859447-64859466 Msa0615390:CDS 40.0%
GAACTTGGATCATGATTGCA+AGG + chr4_2:64859549-64859568 Msa0615390:CDS 40.0%
TAGACTCTCACTCTACATTC+AGG - chr4_2:64859682-64859701 None:intergenic 40.0%
ACACTAGTCCATTACGTTGT+TGG + chr4_2:64859771-64859790 Msa0615390:intron 40.0%
CACTAGTCCATTACGTTGTT+GGG + chr4_2:64859772-64859791 Msa0615390:intron 40.0%
CACTATACCCAACAACGTAA+TGG - chr4_2:64859782-64859801 None:intergenic 40.0%
TTGCAGCATAGATCAAAAGG+AGG + chr4_2:64859849-64859868 Msa0615390:CDS 40.0%
TGCAGCATAGATCAAAAGGA+GGG + chr4_2:64859850-64859869 Msa0615390:CDS 40.0%
! CATAGCCACCAGTTTGAAAT+GGG - chr4_2:64859909-64859928 None:intergenic 40.0%
ACATAGCCACCAGTTTGAAA+TGG - chr4_2:64859910-64859929 None:intergenic 40.0%
GGAATTGGATCAACCCTATT+TGG + chr4_2:64859961-64859980 Msa0615390:CDS 40.0%
CTCAAGTGTCAGTGCTATAT+TGG - chr4_2:64860098-64860117 None:intergenic 40.0%
! GATTATGTTTTCAGCATGGG+AGG + chr4_2:64860349-64860368 Msa0615390:intron 40.0%
TCGCTTCCATTTCCATAACT+TGG - chr4_2:64860393-64860412 None:intergenic 40.0%
TCCACATGTTATCCTAAACC+AGG + chr4_2:64860447-64860466 Msa0615390:intron 40.0%
! ACCTGGTTTAGGATAACATG+TGG - chr4_2:64860451-64860470 None:intergenic 40.0%
! AATGGGGCTTTTCTACCTAT+TGG + chr4_2:64860545-64860564 Msa0615390:intron 40.0%
! TATAAGTGCCGTGTCATTGA+TGG + chr4_2:64860666-64860685 Msa0615390:intron 40.0%
GTTCTACCATGTAACAACTG+TGG + chr4_2:64860862-64860881 Msa0615390:intron 40.0%
TCATTCCCACAGTTGTTACA+TGG - chr4_2:64860871-64860890 None:intergenic 40.0%
TCAGAGAAAGAAGGATTGTG+GGG + chr4_2:64860896-64860915 Msa0615390:intron 40.0%
!! TGTTTTTGCGTTCGGTATTG+GGG - chr4_2:64861057-64861076 None:intergenic 40.0%
TTCCTTGCGGAAATGTTGTT+GGG - chr4_2:64861179-64861198 None:intergenic 40.0%
TTGAGGTGGAGTGTGTTAAT+AGG - chr4_2:64861285-64861304 None:intergenic 40.0%
ATCCAAGGGATTGTCTATTG+AGG - chr4_2:64861302-64861321 None:intergenic 40.0%
TCTTGGAAATGGGGTTGAAA+AGG - chr4_2:64861379-64861398 None:intergenic 40.0%
TTTGGGTGATTTGAAGAGCT+AGG - chr4_2:64861468-64861487 None:intergenic 40.0%
AGCTCTTCAAATCACCCAAA+TGG + chr4_2:64861468-64861487 Msa0615390:intron 40.0%
! CGAAAGGGCTTTGACTTATT+TGG - chr4_2:64861501-64861520 None:intergenic 40.0%
! AGAAAACCGGGTATTGTAAC+TGG + chr4_2:64861549-64861568 Msa0615390:intron 40.0%
TTCAACGTGTGTGTGAGTAT+GGG - chr4_2:64862075-64862094 None:intergenic 40.0%
TTTCAACGTGTGTGTGAGTA+TGG - chr4_2:64862076-64862095 None:intergenic 40.0%
!! ACACACTGCATAGTTTTGCA+AGG - chr4_2:64862108-64862127 None:intergenic 40.0%
TGTCCTCGAATATCTGAAGA+GGG - chr4_2:64862279-64862298 None:intergenic 40.0%
TTGTCCTCGAATATCTGAAG+AGG - chr4_2:64862280-64862299 None:intergenic 40.0%
!! ACATACATCGACTCGTTTCT+TGG + chr4_2:64862344-64862363 Msa0615390:intron 40.0%
TAGTCGGAGACAAGCTAATA+AGG + chr4_2:64862437-64862456 Msa0615390:intron 40.0%
CGGTATATCAGTGTATAGGT+GGG - chr4_2:64862480-64862499 None:intergenic 40.0%
CCACCTATACACTGATATAC+CGG + chr4_2:64862478-64862497 Msa0615390:intron 40.0%
ATGCCGGTATATCAGTGTAT+AGG - chr4_2:64862484-64862503 None:intergenic 40.0%
TTATGGCGTTTGTCTTGTCT+TGG - chr4_2:64862621-64862640 None:intergenic 40.0%
GCATGTAGAAGAGAAGATCA+TGG - chr4_2:64862962-64862981 None:intergenic 40.0%
TTGAGTGCAATATGACCTCT+TGG - chr4_2:64863616-64863635 None:intergenic 40.0%
GCTGAAGTAGTTAATGAAGC+TGG + chr4_2:64863646-64863665 Msa0615390:intron 40.0%
TGGAGATAAGTTTCATGGAG+AGG - chr4_2:64858968-64858987 None:intergenic 40.0%
GTCACACACACAAGAAATGA+TGG + chr4_2:64863739-64863758 Msa0615390:intron 40.0%
ACACAAGAAATGATGGCCAA+AGG + chr4_2:64863746-64863765 Msa0615390:intron 40.0%
!! CAGAACTTTGAAGCATCCTT+TGG - chr4_2:64863765-64863784 None:intergenic 40.0%
ATTGTGAAAGTGAGGAACAG+TGG + chr4_2:64863787-64863806 Msa0615390:intron 40.0%
CTTGGACAATACTTTGGCAT+TGG + chr4_2:64863829-64863848 Msa0615390:intron 40.0%
AGGAACAGCAACAGATATTC+CGG + chr4_2:64863864-64863883 Msa0615390:intron 40.0%
ACAGATATTCCGGAACCTTT+CGG + chr4_2:64863874-64863893 Msa0615390:intron 40.0%
ATCTCTATACCGAAAGGTTC+CGG - chr4_2:64863886-64863905 None:intergenic 40.0%
GAACCTTTCGGTATAGAGAT+AGG + chr4_2:64863886-64863905 Msa0615390:intron 40.0%
! CGAGCTTTATAATGTTACGG+TGG + chr4_2:64864017-64864036 Msa0615390:intron 40.0%
TTACGGTGGATGAATATGGA+AGG + chr4_2:64864031-64864050 Msa0615390:intron 40.0%
! TTGTACACAGTGCAAGTTGA+AGG + chr4_2:64864098-64864117 Msa0615390:intron 40.0%
!! CAAGTTGAAGGAAGGTTTTG+AGG + chr4_2:64864110-64864129 Msa0615390:intron 40.0%
CTTAGATAGAGGCTTCTCTT+TGG - chr4_2:64864138-64864157 None:intergenic 40.0%
GAACTCTGATCATGATTGCA+AGG + chr4_2:64864263-64864282 Msa0615390:intron 40.0%
ACAGTCCTAGATTTCAAGCT+CGG - chr4_2:64864398-64864417 None:intergenic 40.0%
CAGACTGTTGGATCAAAGAT+CGG - chr4_2:64864421-64864440 None:intergenic 40.0%
ACAAGTCTCCCATTTCAAAC+TGG + chr4_2:64864654-64864673 Msa0615390:CDS 40.0%
! CATAGCCACCAGTTTGAAAT+GGG - chr4_2:64859909-64859928 None:intergenic 40.0%
ACATAGCCACCAGTTTGAAA+TGG - chr4_2:64859910-64859929 None:intergenic 40.0%
AATTACCTGTCCATATAGGG+TGG - chr4_2:64864730-64864749 None:intergenic 40.0%
AGATGTATATGAGTCGGACA+CGG + chr4_2:64864815-64864834 Msa0615390:intron 40.0%
TTTCATGATTTCAGGATGGG+AGG + chr4_2:64865049-64865068 Msa0615390:intron 40.0%
TTCATGATTTCAGGATGGGA+GGG + chr4_2:64865050-64865069 Msa0615390:intron 40.0%
TGTTCTTCCATACCACGTTA+TGG + chr4_2:64865078-64865097 Msa0615390:intron 40.0%
TCCATACCACGTTATGGAAA+TGG + chr4_2:64865084-64865103 Msa0615390:intron 40.0%
TCCATTTCCATAACGTGGTA+TGG - chr4_2:64865088-64865107 None:intergenic 40.0%
TCGTTTCCATTTCCATAACG+TGG - chr4_2:64865093-64865112 None:intergenic 40.0%
TATGGAAATGGAAACGAAGC+AGG + chr4_2:64865096-64865115 Msa0615390:intron 40.0%
AATGAGACAGGCTACATTGT+AGG + chr4_2:64865120-64865139 Msa0615390:intron 40.0%
AACAATAGCCAAGAACACAC+TGG + chr4_2:64865219-64865238 Msa0615390:intron 40.0%
CAAGAACACACTGGAGTAAT+GGG + chr4_2:64865228-64865247 Msa0615390:intron 40.0%
AAGAACACACTGGAGTAATG+GGG + chr4_2:64865229-64865248 Msa0615390:intron 40.0%
! AATGGGGCTTTTCTACCTAT+TGG + chr4_2:64860545-64860564 Msa0615390:intron 40.0%
!! GAATGTCTGAGTTGATGGTA+TGG - chr4_2:64865285-64865304 None:intergenic 40.0%
! GAGTAGAATGTCTGAGTTGA+TGG - chr4_2:64865290-64865309 None:intergenic 40.0%
! TATAACTGGCGTGTCATTGA+TGG + chr4_2:64865372-64865391 Msa0615390:intron 40.0%
TTGTCCCCCAAATTTGAGCT+AGG + chr4_2:64858833-64858852 Msa0615390:five_prime_UTR 45.0%
AGGTCCTAGCTCAAATTTGG+GGG - chr4_2:64858840-64858859 None:intergenic 45.0%
CAGGTCCTAGCTCAAATTTG+GGG - chr4_2:64858841-64858860 None:intergenic 45.0%
CCAGGTCCTAGCTCAAATTT+GGG - chr4_2:64858842-64858861 None:intergenic 45.0%
TCCAGGTCCTAGCTCAAATT+TGG - chr4_2:64858843-64858862 None:intergenic 45.0%
!! CAGAGTTTTGTAGCAACCTG+TGG - chr4_2:64859051-64859070 None:intergenic 45.0%
AGAAACAGTGGCATATGCCA+GGG + chr4_2:64859085-64859104 Msa0615390:five_prime_UTR 45.0%
CTTGGACAATACTTTGGCCT+TGG + chr4_2:64859115-64859134 Msa0615390:five_prime_UTR 45.0%
TACCTCTATACCGAAAGGGT+CGG - chr4_2:64859173-64859192 None:intergenic 45.0%
ATGAGTACGGAAGGTCTGTA+AGG + chr4_2:64859326-64859345 Msa0615390:CDS 45.0%
TGCACTCAATCCATCAGTGA+CGG + chr4_2:64859644-64859663 Msa0615390:intron 45.0%
ATCATCACAACCGTCACTGA+TGG - chr4_2:64859657-64859676 None:intergenic 45.0%
ATGGGTGTGTTCATGTGAAG+AGG + chr4_2:64859875-64859894 Msa0615390:CDS 45.0%
ACGAGTCTCCCATTTCAAAC+TGG + chr4_2:64859898-64859917 Msa0615390:CDS 45.0%
AGTCTCCCATTTCAAACTGG+TGG + chr4_2:64859901-64859920 Msa0615390:CDS 45.0%
ACTGGTGGCTATGTGATCTA+TGG + chr4_2:64859916-64859935 Msa0615390:CDS 45.0%
CATCAGCATTCAGGTGGAAT+TGG + chr4_2:64859946-64859965 Msa0615390:CDS 45.0%
TGGATCAACCCTATTTGGAC+AGG + chr4_2:64859966-64859985 Msa0615390:CDS 45.0%
TAATGATTCTGCCTCTCACG+AGG + chr4_2:64860056-64860075 Msa0615390:intron 45.0%
AATGATTCTGCCTCTCACGA+GGG + chr4_2:64860057-64860076 Msa0615390:intron 45.0%
AATATGGAATCCCTCGTGAG+AGG - chr4_2:64860070-64860089 None:intergenic 45.0%
TATGGAAATGGAAGCGAAGC+AGG + chr4_2:64860396-64860415 Msa0615390:intron 45.0%
AGCGAAGCAGGAAATGAATC+AGG + chr4_2:64860408-64860427 Msa0615390:intron 45.0%
GTCTAACTACAACAGCACCA+AGG + chr4_2:64860509-64860528 Msa0615390:intron 45.0%
GTAGAAAAGCCCCATTACTC+CGG - chr4_2:64860541-64860560 None:intergenic 45.0%
! TTCTCGTTCTTCTTTTGGCG+TGG + chr4_2:64860605-64860624 Msa0615390:intron 45.0%
GTTCCTTGCGGAAATGTTGT+TGG - chr4_2:64861180-64861199 None:intergenic 45.0%
!!! GTTTTTTCTGCAGGCAGCTT+GGG - chr4_2:64861234-64861253 None:intergenic 45.0%
!!! TGTTTTTTCTGCAGGCAGCT+TGG - chr4_2:64861235-64861254 None:intergenic 45.0%
!!! TGGCTAGCTGTTTTTTCTGC+AGG - chr4_2:64861243-64861262 None:intergenic 45.0%
GCAGAAAAAACAGCTAGCCA+TGG + chr4_2:64861243-64861262 Msa0615390:intron 45.0%
! GAGGATTTTTGTGGTAGCCA+TGG - chr4_2:64861263-64861282 None:intergenic 45.0%
AGGTGGAGTGTGTTAATAGG+AGG - chr4_2:64861282-64861301 None:intergenic 45.0%
CAAGGGATTGTCTATTGAGG+TGG - chr4_2:64861299-64861318 None:intergenic 45.0%
CACCTCAATAGACAATCCCT+TGG + chr4_2:64861297-64861316 Msa0615390:intron 45.0%
! TGATGGTGATACACAGATGG+TGG + chr4_2:64861344-64861363 Msa0615390:intron 45.0%
GAACAATGAGGTTTGCACAG+TGG - chr4_2:64861431-64861450 None:intergenic 45.0%
AAAGCCCTTTCGACAACCAA+CGG + chr4_2:64861509-64861528 Msa0615390:intron 45.0%
GCATTTCAGTTACATGCCGT+TGG - chr4_2:64861528-64861547 None:intergenic 45.0%
! AAACCGGGTATTGTAACTGG+TGG + chr4_2:64861552-64861571 Msa0615390:intron 45.0%
! AACCGGGTATTGTAACTGGT+GGG + chr4_2:64861553-64861572 Msa0615390:intron 45.0%
TTCCCACCAGTTACAATACC+CGG - chr4_2:64861558-64861577 None:intergenic 45.0%
AAAGTGCAAGAGACGACTTG+TGG + chr4_2:64861975-64861994 Msa0615390:intron 45.0%
ACTATGCAGTGTGTCGAAGA+AGG + chr4_2:64862114-64862133 Msa0615390:intron 45.0%
GTTCCCTCTTCAGATATTCG+AGG + chr4_2:64862273-64862292 Msa0615390:intron 45.0%
CCGGTATATCAGTGTATAGG+TGG - chr4_2:64862481-64862500 None:intergenic 45.0%
CTGATATACCGGCATGTATC+TGG + chr4_2:64862489-64862508 Msa0615390:intron 45.0%
ATCATGGACCAGATACATGC+CGG - chr4_2:64862500-64862519 None:intergenic 45.0%
GACAAGACAAACGCCATAAC+CGG + chr4_2:64862622-64862641 Msa0615390:intron 45.0%
GCCATAACCGGTTATAACCA+GGG + chr4_2:64862634-64862653 Msa0615390:intron 45.0%
ACCCTGGTTATAACCGGTTA+TGG - chr4_2:64862638-64862657 None:intergenic 45.0%
! TTGTCCCCGAAATTCGAGTT+AGG + chr4_2:64863547-64863566 Msa0615390:intron 45.0%
AGGTCCTAACTCGAATTTCG+GGG - chr4_2:64863554-64863573 None:intergenic 45.0%
CAGGTCCTAACTCGAATTTC+GGG - chr4_2:64863555-64863574 None:intergenic 45.0%
CCAGGTCCTAACTCGAATTT+CGG - chr4_2:64863556-64863575 None:intergenic 45.0%
ATCTTGCAACACCCCAATGA+TGG - chr4_2:64863702-64863721 None:intergenic 45.0%
AGGAACAGTGGCATATGTCA+GGG + chr4_2:64863799-64863818 Msa0615390:intron 45.0%
! TGTTGCTGTTCCTCGTGTTT+CGG - chr4_2:64863857-64863876 None:intergenic 45.0%
AGAGATAGGTAATCCTGCAG+AGG + chr4_2:64863900-64863919 Msa0615390:intron 45.0%
AATCCTGCAGAGGTTTCAGA+AGG + chr4_2:64863910-64863929 Msa0615390:intron 45.0%
ATCCTGCAGAGGTTTCAGAA+GGG + chr4_2:64863911-64863930 Msa0615390:intron 45.0%
AGAAGGGTCCGAGGATAAAT+GGG + chr4_2:64863927-64863946 Msa0615390:intron 45.0%
GTTCATGCCATTGATACACG+TGG + chr4_2:64863958-64863977 Msa0615390:intron 45.0%
GGCCAGATTATAAAGGAGGT+TGG + chr4_2:64864061-64864080 Msa0615390:intron 45.0%
! ACACAGTGCAAGTTGAAGGA+AGG + chr4_2:64864102-64864121 Msa0615390:intron 45.0%
GGGTATCATAATGAGCGACA+TGG + chr4_2:64864547-64864566 Msa0615390:intron 45.0%
ATCTTGCAGCACAAACCACA+AGG + chr4_2:64864602-64864621 Msa0615390:CDS 45.0%
ACAAACCACAAGGAGCGAAA+TGG + chr4_2:64864612-64864631 Msa0615390:CDS 45.0%
AGTCTCCCATTTCAAACTGG+TGG + chr4_2:64859901-64859920 Msa0615390:CDS 45.0%
ACTGGTGGCTATGTGATCTA+TGG + chr4_2:64859916-64859935 Msa0615390:CDS 45.0%
CATCAGCATTCAGGTGGAAT+TGG + chr4_2:64859946-64859965 Msa0615390:CDS 45.0%
GGAATTGGATCCACCCTATA+TGG + chr4_2:64864717-64864736 Msa0615390:CDS 45.0%
AACGAAGCAGGAAATGAGAC+AGG + chr4_2:64865108-64865127 Msa0615390:intron 45.0%
! TCAATTATCGTGACGGAACC+TGG - chr4_2:64865168-64865187 None:intergenic 45.0%
GGTTCCGTCACGATAATTGA+TGG + chr4_2:64865168-64865187 Msa0615390:intron 45.0%
CCATTACTCCAGTGTGTTCT+TGG - chr4_2:64865230-64865249 None:intergenic 45.0%
CCAAGAACACACTGGAGTAA+TGG + chr4_2:64865227-64865246 Msa0615390:intron 45.0%
! GTTGCTGTTCTGCAACCAAT+AGG - chr4_2:64865263-64865282 None:intergenic 45.0%
TCCTCGTTGTAAATGGTGCA+AGG + chr4_2:64865467-64865486 Msa0615390:intron 45.0%
ACCTTGCACCATTTACAACG+AGG - chr4_2:64865471-64865490 None:intergenic 45.0%
!! TGGGAAAGGATTTGTTGTGC+AGG + chr4_2:64865520-64865539 Msa0615390:intron 45.0%
!! GGGAAAGGATTTGTTGTGCA+GGG + chr4_2:64865521-64865540 Msa0615390:intron 45.0%
GATTGGAGAATGGCACAGTT+TGG + chr4_2:64865593-64865612 Msa0615390:CDS 45.0%
CCCAAATTTGAGCTAGGACC+TGG + chr4_2:64858839-64858858 Msa0615390:five_prime_UTR 50.0%
GAGAAACAGTGGCATATGCC+AGG + chr4_2:64859084-64859103 Msa0615390:five_prime_UTR 50.0%
TTCCTCGTGTTTCGGATCCA+AGG - chr4_2:64859135-64859154 None:intergenic 50.0%
ACCTCTATACCGAAAGGGTC+GGG - chr4_2:64859172-64859191 None:intergenic 50.0%
GACCCTTTCGGTATAGAGGT+AGG + chr4_2:64859172-64859191 Msa0615390:CDS 50.0%
AGAGGTAGGTAATCCTGCAG+AGG + chr4_2:64859186-64859205 Msa0615390:CDS 50.0%
AATCCTGCAGAGGTTCCAGA+AGG + chr4_2:64859196-64859215 Msa0615390:CDS 50.0%
ATCCTGCAGAGGTTCCAGAA+GGG + chr4_2:64859197-64859216 Msa0615390:CDS 50.0%
GAGGCGCAGAGGATAAGTTA+GGG + chr4_2:64859263-64859282 Msa0615390:CDS 50.0%
TTACGGTGGATGAGTACGGA+AGG + chr4_2:64859317-64859336 Msa0615390:CDS 50.0%
! AGTGAGAGTCTATCGACTGC+TGG + chr4_2:64859690-64859709 Msa0615390:intron 50.0%
! GTGAGAGTCTATCGACTGCT+GGG + chr4_2:64859691-64859710 Msa0615390:intron 50.0%
!! GGTGTTGCTCATCAGCATTC+AGG + chr4_2:64859937-64859956 Msa0615390:CDS 50.0%
GTTGCTCATCAGCATTCAGG+TGG + chr4_2:64859940-64859959 Msa0615390:CDS 50.0%
! AAGGAGCACACCGGAGTAAT+GGG + chr4_2:64860528-64860547 Msa0615390:intron 50.0%
! GGGGCTTTTCTACCTATTGG+TGG + chr4_2:64860548-64860567 Msa0615390:intron 50.0%
!! TTTTGCGTTCGGTATTGGGG+AGG - chr4_2:64861054-64861073 None:intergenic 50.0%
! GTGCTGTTACGCATGACAGT+AGG - chr4_2:64861100-64861119 None:intergenic 50.0%
TGGGTGCAGCAATTTCCTTG+CGG - chr4_2:64861127-64861146 None:intergenic 50.0%
! CCTGTTTGGGCTGTTTGCTA+GGG - chr4_2:64861151-64861170 None:intergenic 50.0%
TTGTTGGGTCTGGCCTGTTT+GGG - chr4_2:64861164-64861183 None:intergenic 50.0%
TGCGGAAATGTTGTTGGGTC+TGG - chr4_2:64861174-64861193 None:intergenic 50.0%
GACCCAACAACATTTCCGCA+AGG + chr4_2:64861174-64861193 Msa0615390:intron 50.0%
CGCAACATGGATGTTCCTTG+CGG - chr4_2:64861192-64861211 None:intergenic 50.0%
! TGAGTGGCGTTGGAATCCAA+GGG - chr4_2:64861316-64861335 None:intergenic 50.0%
! ATGAGTGGCGTTGGAATCCA+AGG - chr4_2:64861317-64861336 None:intergenic 50.0%
CACCATCAGCGTACTATGAG+TGG - chr4_2:64861332-64861351 None:intergenic 50.0%
! CGCTGATGGTGATACACAGA+TGG + chr4_2:64861341-64861360 Msa0615390:intron 50.0%
CAATGAGGTTTGCACAGTGG+AGG - chr4_2:64861428-64861447 None:intergenic 50.0%
! CATGCCGTTGGTTGTCGAAA+GGG - chr4_2:64861516-64861535 None:intergenic 50.0%
! ACATGCCGTTGGTTGTCGAA+AGG - chr4_2:64861517-64861536 None:intergenic 50.0%
CGCCATAACCGGTTATAACC+AGG + chr4_2:64862633-64862652 Msa0615390:intron 50.0%
! CCGAAATTCGAGTTAGGACC+TGG + chr4_2:64863553-64863572 Msa0615390:intron 50.0%
GAGGAACAGTGGCATATGTC+AGG + chr4_2:64863798-64863817 Msa0615390:intron 50.0%
CAGAAGGGTCCGAGGATAAA+TGG + chr4_2:64863926-64863945 Msa0615390:intron 50.0%
GTGGCGTGGAGGATAAGTTA+GGG + chr4_2:64863977-64863996 Msa0615390:intron 50.0%
ACGCAATCAGCACAGACTGT+TGG - chr4_2:64864433-64864452 None:intergenic 50.0%
TGTAGAGTCTCTCGACTGCT+AGG + chr4_2:64864456-64864475 Msa0615390:intron 50.0%
! GGTGTTGCACATCAGCATTC+AGG + chr4_2:64864693-64864712 Msa0615390:CDS 50.0%
GTTGCACATCAGCATTCAGG+TGG + chr4_2:64864696-64864715 Msa0615390:CDS 50.0%
TGGATCCACCCTATATGGAC+AGG + chr4_2:64864722-64864741 Msa0615390:CDS 50.0%
! ATCGTGACGGAACCTGGTTT+AGG - chr4_2:64865162-64865181 None:intergenic 50.0%
TCAGTGTGGCTGCAAGTGTT+TGG + chr4_2:64865500-64865519 Msa0615390:intron 50.0%
CAGTGTGGCTGCAAGTGTTT+GGG + chr4_2:64865501-64865520 Msa0615390:intron 50.0%
TGGCTGCAAGTGTTTGGGAA+AGG + chr4_2:64865506-64865525 Msa0615390:intron 50.0%
TCCCGACCCTTTCGGTATAG+AGG + chr4_2:64859168-64859187 Msa0615390:CDS 55.0%
!! AACCCTTCTGGAACCTCTGC+AGG - chr4_2:64859202-64859221 None:intergenic 55.0%
GTTCATGCCATCGATACGCG+AGG + chr4_2:64859244-64859263 Msa0615390:CDS 55.0%
CGAGGCGCAGAGGATAAGTT+AGG + chr4_2:64859262-64859281 Msa0615390:CDS 55.0%
! AACAGCACCAAGGAGCACAC+CGG + chr4_2:64860519-64860538 Msa0615390:intron 55.0%
CATTACTCCGGTGTGCTCCT+TGG - chr4_2:64860529-64860548 None:intergenic 55.0%
! CAAGGAGCACACCGGAGTAA+TGG + chr4_2:64860527-64860546 Msa0615390:intron 55.0%
! AGGAGCACACCGGAGTAATG+GGG + chr4_2:64860529-64860548 Msa0615390:intron 55.0%
GGAGCTGTTCTGCCACCAAT+AGG - chr4_2:64860563-64860582 None:intergenic 55.0%
CGTAACAGCACAGTTCCGCA+AGG + chr4_2:64861109-64861128 Msa0615390:intron 55.0%
! TTGGGCTGTTTGCTAGGGCT+GGG - chr4_2:64861146-64861165 None:intergenic 55.0%
! TTTGGGCTGTTTGCTAGGGC+TGG - chr4_2:64861147-64861166 None:intergenic 55.0%
CCCTAGCAAACAGCCCAAAC+AGG + chr4_2:64861148-64861167 Msa0615390:intron 55.0%
GCCTGTTTGGGCTGTTTGCT+AGG - chr4_2:64861152-64861171 None:intergenic 55.0%
GTTGTTGGGTCTGGCCTGTT+TGG - chr4_2:64861165-64861184 None:intergenic 55.0%
! TGGGATGTGGCTGTTGGTCT+GGG - chr4_2:64861215-64861234 None:intergenic 55.0%
TTGGGATGTGGCTGTTGGTC+TGG - chr4_2:64861216-64861235 None:intergenic 55.0%
CAGCGTACTATGAGTGGCGT+TGG - chr4_2:64861326-64861345 None:intergenic 55.0%
CGCCACTCATAGTACGCTGA+TGG + chr4_2:64861327-64861346 Msa0615390:intron 55.0%
! GGCATTGGATCCGAAACACG+AGG + chr4_2:64863844-64863863 Msa0615390:intron 55.0%
!! GACCCTTCTGAAACCTCTGC+AGG - chr4_2:64863916-64863935 None:intergenic 55.0%
AGAGGTTTCAGAAGGGTCCG+AGG + chr4_2:64863918-64863937 Msa0615390:intron 55.0%
TGCCATTGATACACGTGGCG+TGG + chr4_2:64863963-64863982 Msa0615390:intron 55.0%
CTCCACGCCACGTGTATCAA+TGG - chr4_2:64863968-64863987 None:intergenic 55.0%
CATTGATACACGTGGCGTGG+AGG + chr4_2:64863966-64863985 Msa0615390:intron 55.0%
CGTGGCGTGGAGGATAAGTT+AGG + chr4_2:64863976-64863995 Msa0615390:intron 55.0%
CACAGCCATTTCGCTCCTTG+TGG - chr4_2:64864620-64864639 None:intergenic 55.0%
GGCCTTGGATCCGAAACACG+AGG + chr4_2:64859130-64859149 Msa0615390:five_prime_UTR 60.0%
! CTGTTGGTCTGGGCGCAACA+TGG - chr4_2:64861205-64861224 None:intergenic 60.0%
GCAGCTTGGGATGTGGCTGT+TGG - chr4_2:64861221-64861240 None:intergenic 60.0%
TCTGCAGGCAGCTTGGGATG+TGG - chr4_2:64861228-64861247 None:intergenic 60.0%
CTCTGCGCCTCGCGTATCGA+TGG - chr4_2:64859254-64859273 None:intergenic 65.0%
CATCGATACGCGAGGCGCAG+AGG + chr4_2:64859252-64859271 Msa0615390:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 64858720 64865673 64858720 ID=Msa0615390;Name=Msa0615390
chr4_2 mRNA 64858720 64865673 64858720 ID=Msa0615390-mRNA-1;Parent=Msa0615390;Name=Msa0615390-mRNA-1;_AED=0.38;_eAED=0.44;_QI=437|0.33|0.75|1|1|0.75|4|0|287
chr4_2 exon 64858720 64859570 64858720 ID=Msa0615390-mRNA-1:exon:18229;Parent=Msa0615390-mRNA-1
chr4_2 exon 64859829 64859987 64859829 ID=Msa0615390-mRNA-1:exon:18230;Parent=Msa0615390-mRNA-1
chr4_2 exon 64864585 64864743 64864585 ID=Msa0615390-mRNA-1:exon:18231;Parent=Msa0615390-mRNA-1
chr4_2 exon 64865542 64865673 64865542 ID=Msa0615390-mRNA-1:exon:18232;Parent=Msa0615390-mRNA-1
chr4_2 five_prime_UTR 64858720 64859156 64858720 ID=Msa0615390-mRNA-1:five_prime_utr;Parent=Msa0615390-mRNA-1
chr4_2 CDS 64859157 64859570 64859157 ID=Msa0615390-mRNA-1:cds;Parent=Msa0615390-mRNA-1
chr4_2 CDS 64859829 64859987 64859829 ID=Msa0615390-mRNA-1:cds;Parent=Msa0615390-mRNA-1
chr4_2 CDS 64864585 64864743 64864585 ID=Msa0615390-mRNA-1:cds;Parent=Msa0615390-mRNA-1
chr4_2 CDS 64865542 64865673 64865542 ID=Msa0615390-mRNA-1:cds;Parent=Msa0615390-mRNA-1
Gene Sequence

>Msa0615390

ATGACAAATATTCCCGACCCTTTCGGTATAGAGGTAGGTAATCCTGCAGAGGTTCCAGAAGGGTTTGATGAGAAATGGATGGTTAATGTTCATGCCATCGATACGCGAGGCGCAGAGGATAAGTTAGGGTGCACTGAGTGTAAATGTGAGCTTTATAATGTTACGGTGGATGAGTACGGAAGGTCTGTAAGGCCTGATTATAAAGGAGGTATGTTATGTTGTTATGATTATACACGGTGCAAGTTGAAGGAAGATTTTGAAGGTCCAAAGAGAAGCCTCTACTTAAGATACACTGTGAAATGGGTTGATTGGGATGATTTTATTGTGCCTGTGAAGATATATATAATTGATGTCACCGATAGTTTGAAACCATCAGATGATTCAAAAGGAATGAACTTGGATCATGATTGCAAGGTTGAGTATGAAGTTGAATCTTGCAGCATAGATCAAAAGGAGGGAAATGGGTGTGTTCATGTGAAGAGGACGAGTCTCCCATTTCAAACTGGTGGCTATGTGATCTATGGTGTTGCTCATCAGCATTCAGGTGGAATTGGATCAACCCTATTTGGACAGATTGAGTATCAAGTTGAATCTTGCAGCACAAACCACAAGGAGCGAAATGGCTGTGTTAATGTAAAGAGGACAAGTCTCCCATTTCAAACTGGTGGCTATGTGATCTATGGTGTTGCACATCAGCATTCAGGTGGAATTGGATCCACCCTATATGGACAGGGCCTATTTAGAGTAATCTGCATAATTATGCAGGTTGAGTCTTGTATGTGTGATTGGAGAATGGCACAGTTTGGCAAAGTGATTGAGTGCTACAATGAATGTAGTAATTGTTGGGATGCTTTGTTTTTGTAA
Protein sequence

>Msa0615390

MTNIPDPFGIEVGNPAEVPEGFDEKWMVNVHAIDTRGAEDKLGCTECKCELYNVTVDEYGRSVRPDYKGGMLCCYDYTRCKLKEDFEGPKRSLYLRYTVKWVDWDDFIVPVKIYIIDVTDSLKPSDDSKGMNLDHDCKVEYEVESCSIDQKEGNGCVHVKRTSLPFQTGGYVIYGVAHQHSGGIGSTLFGQIEYQVESCSTNHKERNGCVNVKRTSLPFQTGGYVIYGVAHQHSGGIGSTLYGQGLFRVICIIMQVESCMCDWRMAQFGKVIECYNECSNCWDALFL*