Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619760 | XP_039684882.1 | 95.739 | 352 | 15 | 0 | 2 | 353 | 278 | 629 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619760 | sp|B2V855|GATA_SULSY | 26.276 | 392 | 216 | 13 | 2 | 333 | 107 | 485 | 4.79e-32 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0619760 | Msa0706250 | 0.975040 | 3.147707e-139 | -8.615850e-47 |
| Msa0619760 | Msa0964580 | -0.808293 | 3.326340e-50 | -8.615850e-47 |
| Msa0619760 | Msa1306720 | 0.801965 | 7.019301e-49 | -8.615850e-47 |
| Msa0576840 | Msa0619760 | 0.987150 | 3.117166e-169 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619760 | MtrunA17_Chr8g0385461 | 95.739 | 352 | 15 | 0 | 2 | 353 | 262 | 613 | 0.0 | 694 |
| Msa0619760 | MtrunA17_Chr8g0377691 | 35.766 | 137 | 79 | 3 | 4 | 132 | 144 | 279 | 2.20e-19 | 89.4 |
| Msa0619760 | MtrunA17_Chr8g0377701 | 35.036 | 137 | 80 | 3 | 4 | 132 | 145 | 280 | 2.31e-17 | 83.6 |
| Msa0619760 | MtrunA17_Chr8g0377651 | 34.559 | 136 | 80 | 3 | 5 | 132 | 145 | 279 | 1.02e-16 | 81.6 |
| Msa0619760 | MtrunA17_Chr8g0377681 | 34.559 | 136 | 80 | 3 | 5 | 132 | 142 | 276 | 4.41e-16 | 79.7 |
| Msa0619760 | MtrunA17_Chr4g0037521 | 35.075 | 134 | 79 | 2 | 4 | 129 | 136 | 269 | 8.74e-16 | 78.6 |
| Msa0619760 | MtrunA17_Chr8g0377641 | 33.077 | 130 | 78 | 2 | 5 | 126 | 142 | 270 | 4.86e-15 | 76.3 |
| Msa0619760 | MtrunA17_Chr3g0130801 | 24.802 | 379 | 213 | 14 | 4 | 331 | 305 | 662 | 5.26e-15 | 76.6 |
| Msa0619760 | MtrunA17_Chr1g0191741 | 35.514 | 107 | 64 | 2 | 8 | 110 | 71 | 176 | 2.45e-14 | 73.9 |
| Msa0619760 | MtrunA17_Chr3g0097801 | 35.036 | 137 | 76 | 2 | 4 | 132 | 145 | 276 | 1.51e-12 | 68.9 |
| Msa0619760 | MtrunA17_Chr8g0384851 | 24.934 | 377 | 221 | 13 | 3 | 333 | 241 | 601 | 2.07e-12 | 68.6 |
| Msa0619760 | MtrunA17_Chr4g0037491 | 43.056 | 72 | 41 | 0 | 58 | 129 | 1 | 72 | 3.90e-12 | 66.6 |
| Msa0619760 | MtrunA17_Chr4g0050371 | 33.621 | 116 | 63 | 3 | 1 | 110 | 115 | 222 | 2.15e-11 | 65.5 |
| Msa0619760 | MtrunA17_Chr2g0279961 | 28.244 | 131 | 87 | 2 | 4 | 129 | 235 | 363 | 3.88e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619760 | AT5G07360.1 | 77.259 | 343 | 78 | 0 | 2 | 344 | 304 | 646 | 0.0 | 581 |
| Msa0619760 | AT5G07360.3 | 77.259 | 343 | 78 | 0 | 2 | 344 | 304 | 646 | 0.0 | 581 |
| Msa0619760 | AT5G07360.2 | 75.510 | 343 | 77 | 1 | 2 | 344 | 304 | 639 | 0.0 | 561 |
| Msa0619760 | AT4G34880.2 | 35.000 | 140 | 83 | 2 | 2 | 133 | 146 | 285 | 2.03e-14 | 74.7 |
| Msa0619760 | AT5G64440.1 | 31.579 | 133 | 84 | 2 | 2 | 129 | 234 | 364 | 1.25e-13 | 72.8 |
| Msa0619760 | AT1G08980.1 | 31.944 | 144 | 91 | 3 | 4 | 141 | 68 | 210 | 2.05e-12 | 68.6 |
| Msa0619760 | AT3G25660.1 | 40.000 | 100 | 60 | 0 | 33 | 132 | 178 | 277 | 2.18e-11 | 65.5 |
Find 120 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTGCAAAGCTTGTTTC+TGG | 0.145581 | 4_2:+70967599 | Msa0619760:CDS |
| CGGCCGCCTATTAATGATTT+TGG | 0.178759 | 4_2:+70969770 | Msa0619760:CDS |
| AGTTAGGAGCATTAGTAATT+TGG | 0.246850 | 4_2:+70969938 | Msa0619760:three_prime_UTR |
| CTCAATATTCCATGGGTTCC+TGG | 0.249322 | 4_2:-70967660 | None:intergenic |
| GTTCAGTGGGCCACTGATCT+TGG | 0.295838 | 4_2:-70968614 | None:intergenic |
| ACTGCATTGCGTCCAACTTT+TGG | 0.315166 | 4_2:+70967980 | Msa0619760:CDS |
| TGTTGTTCTGGATATTGTTC+GGG | 0.341121 | 4_2:+70968180 | Msa0619760:CDS |
| TTCGGACCAAAATCATTAAT+AGG | 0.351030 | 4_2:-70969776 | None:intergenic |
| CTTACAATGTGATCATGGTT+AGG | 0.369584 | 4_2:-70969577 | None:intergenic |
| CCTCATTGATGACCCGTTCC+TGG | 0.369936 | 4_2:+70968237 | Msa0619760:CDS |
| TTCAGTGGGCCACTGATCTT+GGG | 0.371795 | 4_2:-70968613 | None:intergenic |
| TTTACCGTGGATGCATTCAT+TGG | 0.377866 | 4_2:+70969406 | Msa0619760:CDS |
| TGTTGATGTTCTTGCGTCAA+TGG | 0.386897 | 4_2:+70968455 | Msa0619760:CDS |
| AAAGCTTGTTTCTGGATCAT+TGG | 0.387846 | 4_2:+70967607 | Msa0619760:CDS |
| TACACAGTTGATTCTGTTCA+AGG | 0.391326 | 4_2:+70968507 | Msa0619760:CDS |
| CTGTTGTTCTGGATATTGTT+CGG | 0.392117 | 4_2:+70968179 | Msa0619760:CDS |
| GCTTATGATGATGTCTGGTT+TGG | 0.393636 | 4_2:+70967629 | Msa0619760:CDS |
| AACTGATTGTGCTGTTGTTC+TGG | 0.393696 | 4_2:+70968168 | Msa0619760:CDS |
| TTTGATCAGTGGCAGCGATC+AGG | 0.394043 | 4_2:+70968570 | Msa0619760:CDS |
| TTTGGTACTGTTGGTCGAAC+TGG | 0.394321 | 4_2:+70967998 | Msa0619760:CDS |
| CATTGGCTTATGATGATGTC+TGG | 0.399917 | 4_2:+70967624 | Msa0619760:CDS |
| TTCAACAGGTTGAAATCTGC+AGG | 0.407055 | 4_2:+70967569 | Msa0619760:CDS |
| TATGATGATGTCTGGTTTGG+AGG | 0.417149 | 4_2:+70967632 | Msa0619760:CDS |
| ATATGTACATATCAATCTAA+TGG | 0.417478 | 4_2:-70970046 | None:intergenic |
| CTCTACTTACAATTATAGTT+AGG | 0.422303 | 4_2:+70969922 | Msa0619760:three_prime_UTR |
| CAACCACGGACCGCCATGAT+AGG | 0.439850 | 4_2:+70969996 | Msa0619760:three_prime_UTR |
| GCAGGCTCTGGCGTTGGCAA+TGG | 0.441140 | 4_2:+70969715 | Msa0619760:intron |
| CCTGCTGAGGTACTTGCTGC+AGG | 0.447687 | 4_2:-70967710 | None:intergenic |
| AGCATAAATGCCGGTGGTGA+TGG | 0.450186 | 4_2:-70969551 | None:intergenic |
| TTACAATGTGATCATGGTTA+GGG | 0.450343 | 4_2:-70969576 | None:intergenic |
| GTAACACCGCATCGAGCTGC+AGG | 0.456235 | 4_2:-70967959 | None:intergenic |
| GTTGATGTTCTTGCGTCAAT+GGG | 0.462099 | 4_2:+70968456 | Msa0619760:CDS |
| CACAATGGATGTTGATATGC+TGG | 0.465451 | 4_2:+70968542 | Msa0619760:CDS |
| TTGATCAGTGGCAGCGATCA+GGG | 0.470688 | 4_2:+70968571 | Msa0619760:CDS |
| GAAAATTCCTCAATATTCCA+TGG | 0.474256 | 4_2:-70967668 | None:intergenic |
| CCAGTCATAGTAGTGCCAAC+AGG | 0.477969 | 4_2:+70969478 | Msa0619760:CDS |
| GACATTACTAAGTTGACTGT+TGG | 0.478863 | 4_2:+70968262 | Msa0619760:CDS |
| TCCAGCAGTGGACTATATAC+AGG | 0.480191 | 4_2:+70968656 | Msa0619760:CDS |
| TCTGGTTTGGAGGCAGAACC+AGG | 0.481401 | 4_2:+70967642 | Msa0619760:CDS |
| GTTTCTGAACCTATCGCAAA+TGG | 0.486252 | 4_2:-70967917 | None:intergenic |
| TCGAGCTGCAGGGTAAGTTA+TGG | 0.491305 | 4_2:-70967948 | None:intergenic |
| TCATCCGGTATCTTATCATT+CGG | 0.492160 | 4_2:-70969794 | None:intergenic |
| TAGTAATGTCAACCAGGAAC+GGG | 0.492600 | 4_2:-70968249 | None:intergenic |
| TTATCTGCAGGCTCTGGCGT+TGG | 0.498954 | 4_2:+70969709 | Msa0619760:intron |
| ACCTGTATATAGTCCACTGC+TGG | 0.504813 | 4_2:-70968657 | None:intergenic |
| TCATTGGAAATGCAACTGAC+TGG | 0.506344 | 4_2:+70969422 | Msa0619760:CDS |
| TGCGTCAATGGGTGTCAAGA+TGG | 0.506908 | 4_2:+70968467 | Msa0619760:CDS |
| CTTCTTCTGCTGCCACCAGA+TGG | 0.509439 | 4_2:-70969523 | None:intergenic |
| GTATGCATAGGCAACCTTGT+TGG | 0.515233 | 4_2:+70969451 | Msa0619760:CDS |
| ACAAACTTACAATGTGATCA+TGG | 0.515711 | 4_2:-70969582 | None:intergenic |
| ACTGTGTAATTCAGTTTGAA+AGG | 0.517352 | 4_2:-70968492 | None:intergenic |
| CCTGTTGGCACTACTATGAC+TGG | 0.521941 | 4_2:-70969478 | None:intergenic |
| CATACAGGCACAACGAGCAC+GGG | 0.522092 | 4_2:+70969354 | Msa0619760:intron |
| TCATCACGGTCCACCTATCA+TGG | 0.525268 | 4_2:-70970009 | None:intergenic |
| TAACCTTTATAGGATAAGCT+TGG | 0.532243 | 4_2:+70968127 | Msa0619760:intron |
| GCGATAGGTTCAGAAACAGC+TGG | 0.533367 | 4_2:+70967923 | Msa0619760:CDS |
| CTATAGATGCTTACCACCCA+GGG | 0.535077 | 4_2:+70969822 | Msa0619760:CDS |
| AATGAGCATATCAGAAAGCT+TGG | 0.537743 | 4_2:+70968024 | Msa0619760:CDS |
| CTGCTGGAACTAAGCGGGCA+CGG | 0.538133 | 4_2:-70968641 | None:intergenic |
| AATATCTCTGATCTACCATC+TGG | 0.539127 | 4_2:+70969508 | Msa0619760:CDS |
| CCTTGAGCAACTGGGTGAAA+CGG | 0.543738 | 4_2:+70969853 | Msa0619760:CDS |
| GCGGGCACGGTGTAGTTCAG+TGG | 0.548100 | 4_2:-70968628 | None:intergenic |
| GGAATTGTTCCATTTGCGAT+AGG | 0.548827 | 4_2:+70967908 | Msa0619760:intron |
| TAATAGGCGGCCGCTGTATG+TGG | 0.551335 | 4_2:-70969760 | None:intergenic |
| CTGCTGAGGTACTTGCTGCA+GGG | 0.553691 | 4_2:-70967709 | None:intergenic |
| TCTATAGATGCTTACCACCC+AGG | 0.553920 | 4_2:+70969821 | Msa0619760:CDS |
| CATTGGAAATGCAACTGACT+GGG | 0.557301 | 4_2:+70969423 | Msa0619760:CDS |
| CCTGCAGCAAGTACCTCAGC+AGG | 0.559110 | 4_2:+70967710 | Msa0619760:CDS |
| GCATCTATAGATGCATCATC+CGG | 0.560420 | 4_2:-70969809 | None:intergenic |
| AATCTAATGGCTATAAGTTG+TGG | 0.560486 | 4_2:-70970033 | None:intergenic |
| TGGTCCGAATGATAAGATAC+CGG | 0.560910 | 4_2:+70969790 | Msa0619760:CDS |
| CGACCAACAGTACCAAAAGT+TGG | 0.564707 | 4_2:-70967992 | None:intergenic |
| CGGGCACGGTGTAGTTCAGT+GGG | 0.565602 | 4_2:-70968627 | None:intergenic |
| CCGTTTCACCCAGTTGCTCA+AGG | 0.565634 | 4_2:-70969853 | None:intergenic |
| TTAGTAATGTCAACCAGGAA+CGG | 0.565845 | 4_2:-70968250 | None:intergenic |
| TCAGTTGCGGATCTACAGAA+AGG | 0.566963 | 4_2:-70968151 | None:intergenic |
| AAAATTCCTCAATATTCCAT+GGG | 0.567370 | 4_2:-70967667 | None:intergenic |
| TACAATGTGATCATGGTTAG+GGG | 0.570554 | 4_2:-70969575 | None:intergenic |
| GAGATATTAGTAAATCCTGT+TGG | 0.573168 | 4_2:-70969493 | None:intergenic |
| GAGGCAGAACCAGGAACCCA+TGG | 0.574434 | 4_2:+70967651 | Msa0619760:CDS |
| GCATACAGGCACAACGAGCA+CGG | 0.575352 | 4_2:+70969353 | Msa0619760:intron |
| CAGGAACCCATGGAATATTG+AGG | 0.577153 | 4_2:+70967661 | Msa0619760:CDS |
| CAGTTGCGGATCTACAGAAA+GGG | 0.578399 | 4_2:-70968150 | None:intergenic |
| GTCCACTGCTGGAACTAAGC+GGG | 0.581518 | 4_2:-70968646 | None:intergenic |
| AGGCACAACGAGCACGGGGA+AGG | 0.582434 | 4_2:+70969359 | Msa0619760:intron |
| CCACGGACCGCCATGATAGG+TGG | 0.584704 | 4_2:+70969999 | Msa0619760:three_prime_UTR |
| TGCCCGCTTAGTTCCAGCAG+TGG | 0.587159 | 4_2:+70968644 | Msa0619760:CDS |
| CCACCTATCATGGCGGTCCG+TGG | 0.588115 | 4_2:-70969999 | None:intergenic |
| AGAAGAACCACCATCACCAC+CGG | 0.596076 | 4_2:+70969541 | Msa0619760:CDS |
| TCTTGATGATGCCGAGATGG+AGG | 0.598342 | 4_2:+70968288 | Msa0619760:CDS |
| ATCTCTGATCTACCATCTGG+TGG | 0.603930 | 4_2:+70969511 | Msa0619760:CDS |
| ACTTGCTGCAGGGCCAGCAG+AGG | 0.610001 | 4_2:-70967699 | None:intergenic |
| AGGTATATTAAATTTCACAA+TGG | 0.611101 | 4_2:+70968527 | Msa0619760:CDS |
| TGCTGGCTCACTTTGATCAG+TGG | 0.611485 | 4_2:+70968559 | Msa0619760:CDS |
| TCAACAGGTTGAAATCTGCA+GGG | 0.616666 | 4_2:+70967570 | Msa0619760:CDS |
| CAGCCGACAAACCTCCATCT+CGG | 0.617061 | 4_2:-70968299 | None:intergenic |
| ATTTCCAATGAATGCATCCA+CGG | 0.620639 | 4_2:-70969410 | None:intergenic |
| TGATCAGTGGCAGCGATCAG+GGG | 0.622019 | 4_2:+70968572 | Msa0619760:CDS |
| CTATGACTGGTAAACCAACA+AGG | 0.623059 | 4_2:-70969465 | None:intergenic |
| ATATCTTGATGATGCCGAGA+TGG | 0.625613 | 4_2:+70968285 | Msa0619760:CDS |
| ATAAATGCCGGTGGTGATGG+TGG | 0.632691 | 4_2:-70969548 | None:intergenic |
| CCAGGAACGGGTCATCAATG+AGG | 0.635918 | 4_2:-70968237 | None:intergenic |
| AACAACAGCACAATCAGTTG+CGG | 0.636172 | 4_2:-70968164 | None:intergenic |
| CTAACTATAATTGTAAGTAG+AGG | 0.643764 | 4_2:-70969921 | None:intergenic |
| TGTATGAAGCCCAAGATCAG+TGG | 0.644206 | 4_2:+70968604 | Msa0619760:CDS |
| TCAACTTAGTAATGTCAACC+AGG | 0.651939 | 4_2:-70968255 | None:intergenic |
| CTATAAGTTGTGGTTCATCA+CGG | 0.660037 | 4_2:-70970023 | None:intergenic |
| ACTTACCCTGCAGCTCGATG+CGG | 0.661226 | 4_2:+70967953 | Msa0619760:CDS |
| CAACAGGTTGAAATCTGCAG+GGG | 0.661659 | 4_2:+70967571 | Msa0619760:CDS |
| TCAGTGGCAGCGATCAGGGG+AGG | 0.663073 | 4_2:+70968575 | Msa0619760:CDS |
| ACAATGTGATCATGGTTAGG+GGG | 0.666722 | 4_2:-70969574 | None:intergenic |
| GACTGGGAGAAAGTATGCAT+AGG | 0.666730 | 4_2:+70969439 | Msa0619760:CDS |
| TAACACCGCATCGAGCTGCA+GGG | 0.681888 | 4_2:-70967958 | None:intergenic |
| TAATTGAAGAGTACCTGCTG+AGG | 0.688194 | 4_2:-70967723 | None:intergenic |
| AGTCCACTGCTGGAACTAAG+CGG | 0.695324 | 4_2:-70968647 | None:intergenic |
| ATACAGGCACAACGAGCACG+GGG | 0.699547 | 4_2:+70969355 | Msa0619760:intron |
| GTTGTTCTGGATATTGTTCG+GGG | 0.705893 | 4_2:+70968181 | Msa0619760:CDS |
| TTACTAATCACCACATACAG+CGG | 0.709492 | 4_2:+70969750 | Msa0619760:CDS |
| GGACCAAAATCATTAATAGG+CGG | 0.713080 | 4_2:-70969773 | None:intergenic |
| TCACGGTCCACCTATCATGG+CGG | 0.726108 | 4_2:-70970006 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GGTTTAATTTAACTATTTAA+TGG | - | chr4_2:70968696-70968715 | None:intergenic | 15.0% |
| !!! | CAATTGTATATTAATTTTGA+TGG | + | chr4_2:70969186-70969205 | Msa0619760:intron | 15.0% |
| !! | CTAAAGATAAAATAAACTAA+TGG | - | chr4_2:70969301-70969320 | None:intergenic | 15.0% |
| !! | AAATAAACCATATAACAGAA+AGG | - | chr4_2:70967792-70967811 | None:intergenic | 20.0% |
| !!! | AAGGAAACAAACAAAATTTT+AGG | - | chr4_2:70967837-70967856 | None:intergenic | 20.0% |
| !!! | TTGATTTTGTTTATTGTGAT+AGG | + | chr4_2:70967887-70967906 | Msa0619760:intron | 20.0% |
| !!! | ACAATTTTAAGTTTTTCCAA+AGG | - | chr4_2:70968075-70968094 | None:intergenic | 20.0% |
| !! | CATGTCTTTACAATAAAAAT+TGG | - | chr4_2:70968326-70968345 | None:intergenic | 20.0% |
| !! | AAAAAATGGAAATGACTATA+TGG | - | chr4_2:70968380-70968399 | None:intergenic | 20.0% |
| !! | AGGTATATTAAATTTCACAA+TGG | + | chr4_2:70968527-70968546 | Msa0619760:CDS | 20.0% |
| !! | TTACTATAAAAAAGATGAGA+TGG | - | chr4_2:70968717-70968736 | None:intergenic | 20.0% |
| !!! | TTTTATAGTAAGACAATTTG+CGG | + | chr4_2:70968726-70968745 | Msa0619760:intron | 20.0% |
| !!! | AATAAAACACATGTTGATTT+AGG | + | chr4_2:70969063-70969082 | Msa0619760:intron | 20.0% |
| !!! | TATGCTTCTAAATTTTTACT+AGG | + | chr4_2:70969622-70969641 | Msa0619760:intron | 20.0% |
| !! | ATATGTACATATCAATCTAA+TGG | - | chr4_2:70970049-70970068 | None:intergenic | 20.0% |
| ! | AAAATTCCTCAATATTCCAT+GGG | - | chr4_2:70967670-70967689 | None:intergenic | 25.0% |
| !! | GAATATTGAGGAATTTTCTA+CGG | + | chr4_2:70967673-70967692 | Msa0619760:CDS | 25.0% |
| !! | AATATTGAGGAATTTTCTAC+GGG | + | chr4_2:70967674-70967693 | Msa0619760:CDS | 25.0% |
| !!! | TGGTTTATTTTACGATTTAC+TGG | + | chr4_2:70967802-70967821 | Msa0619760:intron | 25.0% |
| ! | TCGTAACAACATTCAAAAAA+TGG | - | chr4_2:70968394-70968413 | None:intergenic | 25.0% |
| !! | ATAGAACTAGATGAGATTTT+AGG | + | chr4_2:70968759-70968778 | Msa0619760:intron | 25.0% |
| ! | ACTGCTACATAAATTACTTA+GGG | - | chr4_2:70968809-70968828 | None:intergenic | 25.0% |
| !!! | CATGTGTTTTATTCTTTTTG+CGG | - | chr4_2:70969056-70969075 | None:intergenic | 25.0% |
| ! | AGATTTGAATTATTGCATAC+AGG | + | chr4_2:70969339-70969358 | Msa0619760:intron | 25.0% |
| ! | CTAACTATAATTGTAAGTAG+AGG | - | chr4_2:70969924-70969943 | None:intergenic | 25.0% |
| ! | CTCTACTTACAATTATAGTT+AGG | + | chr4_2:70969922-70969941 | Msa0619760:three_prime_UTR | 25.0% |
| GAAAATTCCTCAATATTCCA+TGG | - | chr4_2:70967671-70967690 | None:intergenic | 30.0% | |
| !!! | CTTTTGTTTCTGTCTTTTAG+AGG | + | chr4_2:70967765-70967784 | Msa0619760:intron | 30.0% |
| GTTTGTTTCCTTTATATGTG+AGG | + | chr4_2:70967845-70967864 | Msa0619760:intron | 30.0% | |
| AAATTACCATGTTCTACCTT+TGG | + | chr4_2:70968056-70968075 | Msa0619760:intron | 30.0% | |
| GTAAGTTGTGTAACCTTTAT+AGG | + | chr4_2:70968117-70968136 | Msa0619760:intron | 30.0% | |
| TAACCTTTATAGGATAAGCT+TGG | + | chr4_2:70968127-70968146 | Msa0619760:intron | 30.0% | |
| ! | ATGAGGATATCTTTTGATGA+GGG | - | chr4_2:70968223-70968242 | None:intergenic | 30.0% |
| ! | AATGAGGATATCTTTTGATG+AGG | - | chr4_2:70968224-70968243 | None:intergenic | 30.0% |
| GGAAATGACTATATGGAATT+TGG | - | chr4_2:70968373-70968392 | None:intergenic | 30.0% | |
| ACTGTGTAATTCAGTTTGAA+AGG | - | chr4_2:70968495-70968514 | None:intergenic | 30.0% | |
| CACTGCTACATAAATTACTT+AGG | - | chr4_2:70968810-70968829 | None:intergenic | 30.0% | |
| ! | TTTTTCTATCTGTGCTTCAT+AGG | + | chr4_2:70968943-70968962 | Msa0619760:intron | 30.0% |
| GAGATATTAGTAAATCCTGT+TGG | - | chr4_2:70969496-70969515 | None:intergenic | 30.0% | |
| TTACAATGTGATCATGGTTA+GGG | - | chr4_2:70969579-70969598 | None:intergenic | 30.0% | |
| ACAAACTTACAATGTGATCA+TGG | - | chr4_2:70969585-70969604 | None:intergenic | 30.0% | |
| TTCGGACCAAAATCATTAAT+AGG | - | chr4_2:70969779-70969798 | None:intergenic | 30.0% | |
| !! | AGTTAGGAGCATTAGTAATT+TGG | + | chr4_2:70969938-70969957 | Msa0619760:three_prime_UTR | 30.0% |
| !!! | TGCTCATTTTAGAGCTAAAA+AGG | + | chr4_2:70969967-70969986 | Msa0619760:three_prime_UTR | 30.0% |
| !!! | GCTCATTTTAGAGCTAAAAA+GGG | + | chr4_2:70969968-70969987 | Msa0619760:three_prime_UTR | 30.0% |
| AATCTAATGGCTATAAGTTG+TGG | - | chr4_2:70970036-70970055 | None:intergenic | 30.0% | |
| ! | CTTATTGCAAAGCTTGTTTC+TGG | + | chr4_2:70967599-70967618 | Msa0619760:CDS | 35.0% |
| !! | AAAGCTTGTTTCTGGATCAT+TGG | + | chr4_2:70967607-70967626 | Msa0619760:CDS | 35.0% |
| ! | AAACAAAAGTGCAAGCGTTT+AGG | - | chr4_2:70967754-70967773 | None:intergenic | 35.0% |
| TAGAGGTCCTTTCTGTTATA+TGG | + | chr4_2:70967782-70967801 | Msa0619760:intron | 35.0% | |
| AATGAGCATATCAGAAAGCT+TGG | + | chr4_2:70968024-70968043 | Msa0619760:CDS | 35.0% | |
| ! | GTTTTTCCAAAGGTAGAACA+TGG | - | chr4_2:70968065-70968084 | None:intergenic | 35.0% |
| ! | CTGTTGTTCTGGATATTGTT+CGG | + | chr4_2:70968179-70968198 | Msa0619760:CDS | 35.0% |
| ! | TGTTGTTCTGGATATTGTTC+GGG | + | chr4_2:70968180-70968199 | Msa0619760:CDS | 35.0% |
| TTAGTAATGTCAACCAGGAA+CGG | - | chr4_2:70968253-70968272 | None:intergenic | 35.0% | |
| TCAACTTAGTAATGTCAACC+AGG | - | chr4_2:70968258-70968277 | None:intergenic | 35.0% | |
| ! | GACATTACTAAGTTGACTGT+TGG | + | chr4_2:70968262-70968281 | Msa0619760:CDS | 35.0% |
| ! | TACACAGTTGATTCTGTTCA+AGG | + | chr4_2:70968507-70968526 | Msa0619760:CDS | 35.0% |
| ! | AATAAGAGAGTCTTTTACCG+TGG | + | chr4_2:70969393-70969412 | Msa0619760:CDS | 35.0% |
| ATTTCCAATGAATGCATCCA+CGG | - | chr4_2:70969413-70969432 | None:intergenic | 35.0% | |
| AATATCTCTGATCTACCATC+TGG | + | chr4_2:70969508-70969527 | Msa0619760:CDS | 35.0% | |
| TACAATGTGATCATGGTTAG+GGG | - | chr4_2:70969578-70969597 | None:intergenic | 35.0% | |
| CTTACAATGTGATCATGGTT+AGG | - | chr4_2:70969580-70969599 | None:intergenic | 35.0% | |
| TTACTAATCACCACATACAG+CGG | + | chr4_2:70969750-70969769 | Msa0619760:CDS | 35.0% | |
| GGACCAAAATCATTAATAGG+CGG | - | chr4_2:70969776-70969795 | None:intergenic | 35.0% | |
| TCATCCGGTATCTTATCATT+CGG | - | chr4_2:70969797-70969816 | None:intergenic | 35.0% | |
| TAAAAAGGGTAGATCAACCA+CGG | + | chr4_2:70969982-70970001 | Msa0619760:three_prime_UTR | 35.0% | |
| CTATAAGTTGTGGTTCATCA+CGG | - | chr4_2:70970026-70970045 | None:intergenic | 35.0% | |
| ! | TTCAACAGGTTGAAATCTGC+AGG | + | chr4_2:70967569-70967588 | Msa0619760:CDS | 40.0% |
| ! | TCAACAGGTTGAAATCTGCA+GGG | + | chr4_2:70967570-70967589 | Msa0619760:CDS | 40.0% |
| !! | CATTGGCTTATGATGATGTC+TGG | + | chr4_2:70967624-70967643 | Msa0619760:CDS | 40.0% |
| ! | GCTTATGATGATGTCTGGTT+TGG | + | chr4_2:70967629-70967648 | Msa0619760:CDS | 40.0% |
| !! | TATGATGATGTCTGGTTTGG+AGG | + | chr4_2:70967632-70967651 | Msa0619760:CDS | 40.0% |
| !! | TAATTGAAGAGTACCTGCTG+AGG | - | chr4_2:70967726-70967745 | None:intergenic | 40.0% |
| AAAGTGCAAGCGTTTAGGAA+GGG | - | chr4_2:70967749-70967768 | None:intergenic | 40.0% | |
| ! | AAAAGTGCAAGCGTTTAGGA+AGG | - | chr4_2:70967750-70967769 | None:intergenic | 40.0% |
| GGAATTGTTCCATTTGCGAT+AGG | + | chr4_2:70967908-70967927 | Msa0619760:intron | 40.0% | |
| GTTTCTGAACCTATCGCAAA+TGG | - | chr4_2:70967920-70967939 | None:intergenic | 40.0% | |
| AACAACAGCACAATCAGTTG+CGG | - | chr4_2:70968167-70968186 | None:intergenic | 40.0% | |
| ! | AACTGATTGTGCTGTTGTTC+TGG | + | chr4_2:70968168-70968187 | Msa0619760:CDS | 40.0% |
| ! | GTTGTTCTGGATATTGTTCG+GGG | + | chr4_2:70968181-70968200 | Msa0619760:CDS | 40.0% |
| ! | TCTTTTGATGAGGGATCTTC+AGG | - | chr4_2:70968214-70968233 | None:intergenic | 40.0% |
| TAGTAATGTCAACCAGGAAC+GGG | - | chr4_2:70968252-70968271 | None:intergenic | 40.0% | |
| !! | ATATCTTGATGATGCCGAGA+TGG | + | chr4_2:70968285-70968304 | Msa0619760:CDS | 40.0% |
| TTTATTTGCCATGACAACCC+AGG | + | chr4_2:70968431-70968450 | Msa0619760:intron | 40.0% | |
| TGTTGATGTTCTTGCGTCAA+TGG | + | chr4_2:70968455-70968474 | Msa0619760:CDS | 40.0% | |
| GTTGATGTTCTTGCGTCAAT+GGG | + | chr4_2:70968456-70968475 | Msa0619760:CDS | 40.0% | |
| CACAATGGATGTTGATATGC+TGG | + | chr4_2:70968542-70968561 | Msa0619760:CDS | 40.0% | |
| ACACAGGACACATTAATCTG+AGG | - | chr4_2:70968836-70968855 | None:intergenic | 40.0% | |
| CAGATTAATGTGTCCTGTGT+CGG | + | chr4_2:70968836-70968855 | Msa0619760:intron | 40.0% | |
| AATGGTTGGGAACATACATG+CGG | + | chr4_2:70969012-70969031 | Msa0619760:intron | 40.0% | |
| !! | TTGTACCAAAAGTACCAGAG+GGG | - | chr4_2:70969091-70969110 | None:intergenic | 40.0% |
| !! | CTTGTACCAAAAGTACCAGA+GGG | - | chr4_2:70969092-70969111 | None:intergenic | 40.0% |
| !! | CTGAAAACTCTGAGGTTCTA+TGG | - | chr4_2:70969116-70969135 | None:intergenic | 40.0% |
| ! | CATAGAACCTCAGAGTTTTC+AGG | + | chr4_2:70969114-70969133 | Msa0619760:intron | 40.0% |
| TCAGAAACCTGAAAACTCTG+AGG | - | chr4_2:70969124-70969143 | None:intergenic | 40.0% | |
| TTGACACTTGCAGAAAGATC+AGG | + | chr4_2:70969241-70969260 | Msa0619760:intron | 40.0% | |
| TTTACCGTGGATGCATTCAT+TGG | + | chr4_2:70969406-70969425 | Msa0619760:CDS | 40.0% | |
| TCATTGGAAATGCAACTGAC+TGG | + | chr4_2:70969422-70969441 | Msa0619760:CDS | 40.0% | |
| CATTGGAAATGCAACTGACT+GGG | + | chr4_2:70969423-70969442 | Msa0619760:CDS | 40.0% | |
| CTATGACTGGTAAACCAACA+AGG | - | chr4_2:70969468-70969487 | None:intergenic | 40.0% | |
| ACAATGTGATCATGGTTAGG+GGG | - | chr4_2:70969577-70969596 | None:intergenic | 40.0% | |
| TATTTCCCCTGTTTATCTGC+AGG | + | chr4_2:70969697-70969716 | Msa0619760:intron | 40.0% | |
| TGGTCCGAATGATAAGATAC+CGG | + | chr4_2:70969790-70969809 | Msa0619760:CDS | 40.0% | |
| GCATCTATAGATGCATCATC+CGG | - | chr4_2:70969812-70969831 | None:intergenic | 40.0% | |
| !! | TTTTTGGTCCTTGAGCAACT+GGG | + | chr4_2:70969845-70969864 | Msa0619760:CDS | 40.0% |
| ! | CAACAGGTTGAAATCTGCAG+GGG | + | chr4_2:70967571-70967590 | Msa0619760:CDS | 45.0% |
| CTCAATATTCCATGGGTTCC+TGG | - | chr4_2:70967663-70967682 | None:intergenic | 45.0% | |
| CAGGAACCCATGGAATATTG+AGG | + | chr4_2:70967661-70967680 | Msa0619760:CDS | 45.0% | |
| ! | ACTGCATTGCGTCCAACTTT+TGG | + | chr4_2:70967980-70967999 | Msa0619760:CDS | 45.0% |
| ! | CGTCCAACTTTTGGTACTGT+TGG | + | chr4_2:70967989-70968008 | Msa0619760:CDS | 45.0% |
| CGACCAACAGTACCAAAAGT+TGG | - | chr4_2:70967995-70968014 | None:intergenic | 45.0% | |
| TTTGGTACTGTTGGTCGAAC+TGG | + | chr4_2:70967998-70968017 | Msa0619760:CDS | 45.0% | |
| GGGCCAAGCTTATCCTATAA+AGG | - | chr4_2:70968133-70968152 | None:intergenic | 45.0% | |
| CAGTTGCGGATCTACAGAAA+GGG | - | chr4_2:70968153-70968172 | None:intergenic | 45.0% | |
| TCAGTTGCGGATCTACAGAA+AGG | - | chr4_2:70968154-70968173 | None:intergenic | 45.0% | |
| ATCAACAACCTGGGTTGTCA+TGG | - | chr4_2:70968442-70968461 | None:intergenic | 45.0% | |
| CGCAAGAACATCAACAACCT+GGG | - | chr4_2:70968451-70968470 | None:intergenic | 45.0% | |
| ACGCAAGAACATCAACAACC+TGG | - | chr4_2:70968452-70968471 | None:intergenic | 45.0% | |
| TGTATGAAGCCCAAGATCAG+TGG | + | chr4_2:70968604-70968623 | Msa0619760:CDS | 45.0% | |
| !! | TCCAGCAGTGGACTATATAC+AGG | + | chr4_2:70968656-70968675 | Msa0619760:CDS | 45.0% |
| ACCTGTATATAGTCCACTGC+TGG | - | chr4_2:70968660-70968679 | None:intergenic | 45.0% | |
| TACGTGTAAATGTCCGACAC+AGG | - | chr4_2:70968852-70968871 | None:intergenic | 45.0% | |
| CATGACACTAACATCGAGAC+TGG | - | chr4_2:70968912-70968931 | None:intergenic | 45.0% | |
| GAACAGATAGGCTGCTATCT+GGG | - | chr4_2:70968981-70969000 | None:intergenic | 45.0% | |
| TACCTCGCATACGAACAGAT+AGG | - | chr4_2:70968993-70969012 | None:intergenic | 45.0% | |
| TCTGTTCGTATGCGAGGTAA+TGG | + | chr4_2:70968994-70969013 | Msa0619760:intron | 45.0% | |
| ! | TTCGTATGCGAGGTAATGGT+TGG | + | chr4_2:70968998-70969017 | Msa0619760:intron | 45.0% |
| ! | TCGTATGCGAGGTAATGGTT+GGG | + | chr4_2:70968999-70969018 | Msa0619760:intron | 45.0% |
| !! | CCTTGTACCAAAAGTACCAG+AGG | - | chr4_2:70969093-70969112 | None:intergenic | 45.0% |
| ! | CCTCTGGTACTTTTGGTACA+AGG | + | chr4_2:70969090-70969109 | Msa0619760:intron | 45.0% |
| ! | GACTGGGAGAAAGTATGCAT+AGG | + | chr4_2:70969439-70969458 | Msa0619760:CDS | 45.0% |
| GTATGCATAGGCAACCTTGT+TGG | + | chr4_2:70969451-70969470 | Msa0619760:CDS | 45.0% | |
| ATCTCTGATCTACCATCTGG+TGG | + | chr4_2:70969511-70969530 | Msa0619760:CDS | 45.0% | |
| ! | CGGCCGCCTATTAATGATTT+TGG | + | chr4_2:70969770-70969789 | Msa0619760:CDS | 45.0% |
| TCTATAGATGCTTACCACCC+AGG | + | chr4_2:70969821-70969840 | Msa0619760:CDS | 45.0% | |
| CTATAGATGCTTACCACCCA+GGG | + | chr4_2:70969822-70969841 | Msa0619760:CDS | 45.0% | |
| !!! | GTTTTTGGTCCTTGAGCAAC+TGG | + | chr4_2:70969844-70969863 | Msa0619760:CDS | 45.0% |
| ! | TCAGCGCACTGAGTTTTACT+CGG | + | chr4_2:70969884-70969903 | Msa0619760:exon | 45.0% |
| ! | TTTTCTACGGGTTCCTCTGC+TGG | + | chr4_2:70967686-70967705 | Msa0619760:CDS | 50.0% |
| CACGCACGCCTCACATATAA+AGG | - | chr4_2:70967856-70967875 | None:intergenic | 50.0% | |
| GCGATAGGTTCAGAAACAGC+TGG | + | chr4_2:70967923-70967942 | Msa0619760:CDS | 50.0% | |
| TCGAGCTGCAGGGTAAGTTA+TGG | - | chr4_2:70967951-70967970 | None:intergenic | 50.0% | |
| !! | TCTTGATGATGCCGAGATGG+AGG | + | chr4_2:70968288-70968307 | Msa0619760:CDS | 50.0% |
| ATGCCGAGATGGAGGTTTGT+CGG | + | chr4_2:70968296-70968315 | Msa0619760:intron | 50.0% | |
| TGCGTCAATGGGTGTCAAGA+TGG | + | chr4_2:70968467-70968486 | Msa0619760:CDS | 50.0% | |
| !! | TGCTGGCTCACTTTGATCAG+TGG | + | chr4_2:70968559-70968578 | Msa0619760:CDS | 50.0% |
| TTTGATCAGTGGCAGCGATC+AGG | + | chr4_2:70968570-70968589 | Msa0619760:CDS | 50.0% | |
| TTGATCAGTGGCAGCGATCA+GGG | + | chr4_2:70968571-70968590 | Msa0619760:CDS | 50.0% | |
| TTCAGTGGGCCACTGATCTT+GGG | - | chr4_2:70968616-70968635 | None:intergenic | 50.0% | |
| AGTCCACTGCTGGAACTAAG+CGG | - | chr4_2:70968650-70968669 | None:intergenic | 50.0% | |
| CGAACAGATAGGCTGCTATC+TGG | - | chr4_2:70968982-70969001 | None:intergenic | 50.0% | |
| AGCCTATCTGTTCGTATGCG+AGG | + | chr4_2:70968988-70969007 | Msa0619760:intron | 50.0% | |
| !! | TGTTGATTTAGGCTCCCCTC+TGG | + | chr4_2:70969074-70969093 | Msa0619760:intron | 50.0% |
| CCTGTTGGCACTACTATGAC+TGG | - | chr4_2:70969481-70969500 | None:intergenic | 50.0% | |
| CCAGTCATAGTAGTGCCAAC+AGG | + | chr4_2:70969478-70969497 | Msa0619760:CDS | 50.0% | |
| AGAAGAACCACCATCACCAC+CGG | + | chr4_2:70969541-70969560 | Msa0619760:CDS | 50.0% | |
| !! | ATAAATGCCGGTGGTGATGG+TGG | - | chr4_2:70969551-70969570 | None:intergenic | 50.0% |
| AGCATAAATGCCGGTGGTGA+TGG | - | chr4_2:70969554-70969573 | None:intergenic | 50.0% | |
| ! | GTTAGGGGGAGCATAAATGC+CGG | - | chr4_2:70969563-70969582 | None:intergenic | 50.0% |
| CAGAGCCTGCAGATAAACAG+GGG | - | chr4_2:70969705-70969724 | None:intergenic | 50.0% | |
| CCAGAGCCTGCAGATAAACA+GGG | - | chr4_2:70969706-70969725 | None:intergenic | 50.0% | |
| ! | TGCTTACCACCCAGGGTTTT+TGG | + | chr4_2:70969829-70969848 | Msa0619760:CDS | 50.0% |
| GCTCAAGGACCAAAAACCCT+GGG | - | chr4_2:70969841-70969860 | None:intergenic | 50.0% | |
| TGCTCAAGGACCAAAAACCC+TGG | - | chr4_2:70969842-70969861 | None:intergenic | 50.0% | |
| CCTTGAGCAACTGGGTGAAA+CGG | + | chr4_2:70969853-70969872 | Msa0619760:CDS | 50.0% | |
| TCATCACGGTCCACCTATCA+TGG | - | chr4_2:70970012-70970031 | None:intergenic | 50.0% | |
| !! | TCTGGTTTGGAGGCAGAACC+AGG | + | chr4_2:70967642-70967661 | Msa0619760:CDS | 55.0% |
| ! | CTGCTGAGGTACTTGCTGCA+GGG | - | chr4_2:70967712-70967731 | None:intergenic | 55.0% |
| ACTTACCCTGCAGCTCGATG+CGG | + | chr4_2:70967953-70967972 | Msa0619760:CDS | 55.0% | |
| TAACACCGCATCGAGCTGCA+GGG | - | chr4_2:70967961-70967980 | None:intergenic | 55.0% | |
| CCAGGAACGGGTCATCAATG+AGG | - | chr4_2:70968240-70968259 | None:intergenic | 55.0% | |
| ! | CCTCATTGATGACCCGTTCC+TGG | + | chr4_2:70968237-70968256 | Msa0619760:CDS | 55.0% |
| CAGCCGACAAACCTCCATCT+CGG | - | chr4_2:70968302-70968321 | None:intergenic | 55.0% | |
| TGATCAGTGGCAGCGATCAG+GGG | + | chr4_2:70968572-70968591 | Msa0619760:CDS | 55.0% | |
| GTTCAGTGGGCCACTGATCT+TGG | - | chr4_2:70968617-70968636 | None:intergenic | 55.0% | |
| GTCCACTGCTGGAACTAAGC+GGG | - | chr4_2:70968649-70968668 | None:intergenic | 55.0% | |
| ! | AGGCTCCCCTCTGGTACTTT+TGG | + | chr4_2:70969083-70969102 | Msa0619760:intron | 55.0% |
| GCATACAGGCACAACGAGCA+CGG | + | chr4_2:70969353-70969372 | Msa0619760:intron | 55.0% | |
| CATACAGGCACAACGAGCAC+GGG | + | chr4_2:70969354-70969373 | Msa0619760:intron | 55.0% | |
| ATACAGGCACAACGAGCACG+GGG | + | chr4_2:70969355-70969374 | Msa0619760:intron | 55.0% | |
| CTTCTTCTGCTGCCACCAGA+TGG | - | chr4_2:70969526-70969545 | None:intergenic | 55.0% | |
| CCCTGTTTATCTGCAGGCTC+TGG | + | chr4_2:70969703-70969722 | Msa0619760:intron | 55.0% | |
| GCCAGAGCCTGCAGATAAAC+AGG | - | chr4_2:70969707-70969726 | None:intergenic | 55.0% | |
| ! | TTATCTGCAGGCTCTGGCGT+TGG | + | chr4_2:70969709-70969728 | Msa0619760:intron | 55.0% |
| TAATAGGCGGCCGCTGTATG+TGG | - | chr4_2:70969763-70969782 | None:intergenic | 55.0% | |
| CAAGGACCAAAAACCCTGGG+TGG | - | chr4_2:70969838-70969857 | None:intergenic | 55.0% | |
| CCGTTTCACCCAGTTGCTCA+AGG | - | chr4_2:70969856-70969875 | None:intergenic | 55.0% | |
| TCACGGTCCACCTATCATGG+CGG | - | chr4_2:70970009-70970028 | None:intergenic | 55.0% | |
| GAGGCAGAACCAGGAACCCA+TGG | + | chr4_2:70967651-70967670 | Msa0619760:CDS | 60.0% | |
| ! | CCTGCTGAGGTACTTGCTGC+AGG | - | chr4_2:70967713-70967732 | None:intergenic | 60.0% |
| CCTGCAGCAAGTACCTCAGC+AGG | + | chr4_2:70967710-70967729 | Msa0619760:CDS | 60.0% | |
| GTAACACCGCATCGAGCTGC+AGG | - | chr4_2:70967962-70967981 | None:intergenic | 60.0% | |
| CGGGCACGGTGTAGTTCAGT+GGG | - | chr4_2:70968630-70968649 | None:intergenic | 60.0% | |
| CTGCTGGAACTAAGCGGGCA+CGG | - | chr4_2:70968644-70968663 | None:intergenic | 60.0% | |
| TGCCCGCTTAGTTCCAGCAG+TGG | + | chr4_2:70968644-70968663 | Msa0619760:CDS | 60.0% | |
| ! | AGGGGGAGCATAAATGCCGG+TGG | - | chr4_2:70969560-70969579 | None:intergenic | 60.0% |
| CAACCACGGACCGCCATGAT+AGG | + | chr4_2:70969996-70970015 | Msa0619760:three_prime_UTR | 60.0% | |
| ! | ACTTGCTGCAGGGCCAGCAG+AGG | - | chr4_2:70967702-70967721 | None:intergenic | 65.0% |
| TCAGTGGCAGCGATCAGGGG+AGG | + | chr4_2:70968575-70968594 | Msa0619760:CDS | 65.0% | |
| GCGGGCACGGTGTAGTTCAG+TGG | - | chr4_2:70968631-70968650 | None:intergenic | 65.0% | |
| AGGCACAACGAGCACGGGGA+AGG | + | chr4_2:70969359-70969378 | Msa0619760:intron | 65.0% | |
| !! | GCAGGCTCTGGCGTTGGCAA+TGG | + | chr4_2:70969715-70969734 | Msa0619760:intron | 65.0% |
| CCACCTATCATGGCGGTCCG+TGG | - | chr4_2:70970002-70970021 | None:intergenic | 65.0% | |
| CCACGGACCGCCATGATAGG+TGG | + | chr4_2:70969999-70970018 | Msa0619760:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 70967563 | 70970079 | 70967563 | ID=Msa0619760;Name=Msa0619760 |
| chr4_2 | mRNA | 70967563 | 70970079 | 70967563 | ID=Msa0619760-mRNA-1;Parent=Msa0619760;Name=Msa0619760-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.8|0.66|1|1|1|6|184|370 |
| chr4_2 | exon | 70967563 | 70967731 | 70967563 | ID=Msa0619760-mRNA-1:exon:20835;Parent=Msa0619760-mRNA-1 |
| chr4_2 | exon | 70967909 | 70968045 | 70967909 | ID=Msa0619760-mRNA-1:exon:20836;Parent=Msa0619760-mRNA-1 |
| chr4_2 | exon | 70968139 | 70968309 | 70968139 | ID=Msa0619760-mRNA-1:exon:20837;Parent=Msa0619760-mRNA-1 |
| chr4_2 | exon | 70968453 | 70968677 | 70968453 | ID=Msa0619760-mRNA-1:exon:20838;Parent=Msa0619760-mRNA-1 |
| chr4_2 | exon | 70969361 | 70969594 | 70969361 | ID=Msa0619760-mRNA-1:exon:20839;Parent=Msa0619760-mRNA-1 |
| chr4_2 | exon | 70969719 | 70970079 | 70969719 | ID=Msa0619760-mRNA-1:exon:20840;Parent=Msa0619760-mRNA-1 |
| chr4_2 | CDS | 70967563 | 70967731 | 70967563 | ID=Msa0619760-mRNA-1:cds;Parent=Msa0619760-mRNA-1 |
| chr4_2 | CDS | 70967909 | 70968045 | 70967909 | ID=Msa0619760-mRNA-1:cds;Parent=Msa0619760-mRNA-1 |
| chr4_2 | CDS | 70968139 | 70968309 | 70968139 | ID=Msa0619760-mRNA-1:cds;Parent=Msa0619760-mRNA-1 |
| chr4_2 | CDS | 70968453 | 70968677 | 70968453 | ID=Msa0619760-mRNA-1:cds;Parent=Msa0619760-mRNA-1 |
| chr4_2 | CDS | 70969361 | 70969594 | 70969361 | ID=Msa0619760-mRNA-1:cds;Parent=Msa0619760-mRNA-1 |
| chr4_2 | CDS | 70969719 | 70969895 | 70969719 | ID=Msa0619760-mRNA-1:cds;Parent=Msa0619760-mRNA-1 |
| chr4_2 | three_prime_UTR | 70969896 | 70970079 | 70969896 | ID=Msa0619760-mRNA-1:three_prime_utr;Parent=Msa0619760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
