Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622590 | XP_003610252.1 | 98.844 | 173 | 2 | 0 | 1 | 173 | 1 | 173 | 3.18e-125 | 359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622590 | sp|Q54UB0|TM208_DICDI | 37.209 | 129 | 81 | 0 | 1 | 129 | 1 | 129 | 4.51e-25 | 98.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0093740 | Msa0622590 | 0.803083 | 4.129033e-49 | -8.615850e-47 |
| Msa0622590 | Msa1171510 | 0.801313 | 9.548818e-49 | -8.615850e-47 |
| Msa0622590 | Msa1202470 | 0.807778 | 4.280728e-50 | -8.615850e-47 |
| Msa0622590 | Msa1264760 | 0.954297 | 4.062583e-112 | -8.615850e-47 |
| Msa0413130 | Msa0622590 | 0.801481 | 8.825147e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622590 | MtrunA17_Chr4g0073431 | 98.844 | 173 | 2 | 0 | 1 | 173 | 1 | 173 | 2.93e-129 | 359 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622590 | AT2G23940.2 | 78.035 | 173 | 38 | 0 | 1 | 173 | 1 | 173 | 1.37e-104 | 297 |
| Msa0622590 | AT2G23940.1 | 78.035 | 173 | 38 | 0 | 1 | 173 | 1 | 173 | 1.37e-104 | 297 |
| Msa0622590 | AT2G23940.3 | 78.035 | 173 | 38 | 0 | 1 | 173 | 1 | 173 | 1.37e-104 | 297 |
| Msa0622590 | AT4G30500.1 | 72.832 | 173 | 47 | 0 | 1 | 173 | 1 | 173 | 5.33e-95 | 273 |
Find 70 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCATCAATCTTGGATAAT+TGG | 0.115218 | 4_2:+75079957 | None:intergenic |
| TTTCTTGTGCTCCTCTATTT+AGG | 0.119107 | 4_2:-75079861 | Msa0622590:three_prime_UTR |
| CAATCCTTTGGCTTGATTAA+AGG | 0.151562 | 4_2:-75080216 | Msa0622590:CDS |
| AGGTTATTTATGTAATAATT+AGG | 0.232573 | 4_2:-75083099 | Msa0622590:CDS |
| TGAAACATTTCAAGAGTTAA+TGG | 0.248219 | 4_2:-75079718 | Msa0622590:three_prime_UTR |
| TTCTTGTGCTCCTCTATTTA+GGG | 0.258325 | 4_2:-75079860 | Msa0622590:three_prime_UTR |
| AATCCTTTGGCTTGATTAAA+GGG | 0.267308 | 4_2:-75080215 | Msa0622590:CDS |
| CATCTTAGCAAGTTGTTGAT+AGG | 0.292767 | 4_2:+75083000 | None:intergenic |
| TCGCCACCGGTAACGTTGTT+TGG | 0.355878 | 4_2:-75083368 | Msa0622590:five_prime_UTR |
| CTCTCACCAAACAACGTTAC+CGG | 0.360039 | 4_2:+75083362 | None:intergenic |
| ATCTAAAAGCTCACCGTCTT+GGG | 0.363264 | 4_2:+75082961 | None:intergenic |
| ATGGTGTGGAATTGTGTAAA+TGG | 0.387512 | 4_2:-75079699 | Msa0622590:three_prime_UTR |
| TGACTACTGGTGGAGTTTGC+GGG | 0.388521 | 4_2:-75082925 | Msa0622590:intron |
| CCATCATCTCTGGAAAGTTC+TGG | 0.397340 | 4_2:-75082124 | Msa0622590:CDS |
| CAAGCCAATCCAATGCTTCC+AGG | 0.397383 | 4_2:+75083051 | None:intergenic |
| TCCATCAATCTTGGATAATT+GGG | 0.400313 | 4_2:+75079958 | None:intergenic |
| AATTTATAAAAGTTCTTGTA+AGG | 0.400644 | 4_2:-75079807 | Msa0622590:three_prime_UTR |
| ATTGGGTGATATTGTGCAAC+TGG | 0.404749 | 4_2:+75079975 | None:intergenic |
| AGAGAAAGAGAGTACGTTGC+AGG | 0.407204 | 4_2:+75083261 | None:intergenic |
| TTTGGAGCATACCAATCCTT+TGG | 0.411793 | 4_2:-75080228 | Msa0622590:CDS |
| ATTTGTCAGATACCAGCATT+TGG | 0.414553 | 4_2:-75080246 | Msa0622590:intron |
| ATGAAAAGACCCGCAAGAAA+AGG | 0.419275 | 4_2:-75080072 | Msa0622590:CDS |
| GTAAAACCCTCCATCAATCT+TGG | 0.421219 | 4_2:+75079949 | None:intergenic |
| GGACTAGCCTCTGGGATACT+TGG | 0.427013 | 4_2:-75079786 | Msa0622590:three_prime_UTR |
| CTGGAAGCATTGGATTGGCT+TGG | 0.440533 | 4_2:-75083050 | Msa0622590:CDS |
| CTAGCTTCACCTGGAAGCAT+TGG | 0.442403 | 4_2:-75083060 | Msa0622590:CDS |
| TGTCTTGACAAACTTAGGTC+TGG | 0.445497 | 4_2:+75080027 | None:intergenic |
| AAGGGAAAAGATGGAGAAGA+AGG | 0.445950 | 4_2:-75080053 | Msa0622590:CDS |
| CTATCAACAACTTGCTAAGA+TGG | 0.453545 | 4_2:-75082999 | Msa0622590:CDS |
| CAAGTCGCTTCCATCATCTC+TGG | 0.460619 | 4_2:-75082134 | Msa0622590:CDS |
| ACACGAACTAGATAGTTTGC+TGG | 0.460935 | 4_2:-75080007 | Msa0622590:exon |
| CATCTAAAAGCTCACCGTCT+TGG | 0.461805 | 4_2:+75082960 | None:intergenic |
| TTCTTGTAAGGACTAGCCTC+TGG | 0.463137 | 4_2:-75079795 | Msa0622590:three_prime_UTR |
| TGAAAAGACCCGCAAGAAAA+GGG | 0.467032 | 4_2:-75080071 | Msa0622590:CDS |
| CCGCAAGAAAAGGGAAAAGA+TGG | 0.467797 | 4_2:-75080062 | Msa0622590:CDS |
| CAATGCACCTTTCCAAAAGC+TGG | 0.470036 | 4_2:-75079611 | None:intergenic |
| GCTTCCAGGTGAAGCTAGAA+TGG | 0.471678 | 4_2:+75083065 | None:intergenic |
| CCAGAACTTTCCAGAGATGA+TGG | 0.477172 | 4_2:+75082124 | None:intergenic |
| TGTGTAAATGGATTTAACCT+TGG | 0.484803 | 4_2:-75079687 | Msa0622590:three_prime_UTR |
| ATCTTAGCAAGTTGTTGATA+GGG | 0.495823 | 4_2:+75083001 | None:intergenic |
| AAATAGAGGAGCACAAGAAA+AGG | 0.501007 | 4_2:+75079864 | None:intergenic |
| ACCCAATTATCCAAGATTGA+TGG | 0.502312 | 4_2:-75079959 | Msa0622590:three_prime_UTR |
| ATGACTACTGGTGGAGTTTG+CGG | 0.504873 | 4_2:-75082926 | Msa0622590:CDS |
| ACGTTGTTTGGTGAGAGAAA+TGG | 0.507991 | 4_2:-75083356 | Msa0622590:exon |
| GATTGGTATGCTCCAAATGC+TGG | 0.509174 | 4_2:+75080234 | None:intergenic |
| TTCACCTGGAAGCATTGGAT+TGG | 0.509382 | 4_2:-75083055 | Msa0622590:CDS |
| GTTCGTGTCTTGACAAACTT+AGG | 0.524815 | 4_2:+75080022 | None:intergenic |
| TCACCGTCTTGGGTATAACT+AGG | 0.527034 | 4_2:+75082971 | None:intergenic |
| GTGAGAGAAATGGCGAATCA+AGG | 0.541390 | 4_2:-75083346 | Msa0622590:exon |
| GATGATGATGTGGCGGAGCT+TGG | 0.543319 | 4_2:+75083285 | None:intergenic |
| TCTTCCATTCTAGCTTCACC+TGG | 0.546155 | 4_2:-75083069 | Msa0622590:CDS |
| CTTTAATCAAGCCAAAGGAT+TGG | 0.550609 | 4_2:+75080217 | None:intergenic |
| GTAAATGGATTTAACCTTGG+CGG | 0.559493 | 4_2:-75079684 | Msa0622590:three_prime_UTR |
| AAACCCTTTAATCAAGCCAA+AGG | 0.572435 | 4_2:+75080212 | None:intergenic |
| CAATTATCCAAGATTGATGG+AGG | 0.583920 | 4_2:-75079956 | Msa0622590:three_prime_UTR |
| GGGAAAATAATAAGCTAGAG+AGG | 0.590375 | 4_2:+75083021 | None:intergenic |
| TTGTGAGATTTACACCGCCA+AGG | 0.599371 | 4_2:+75079670 | None:intergenic |
| TCTTGTAAGGACTAGCCTCT+GGG | 0.601747 | 4_2:-75079794 | Msa0622590:three_prime_UTR |
| AGCAGCGACTTCATCGCCAC+CGG | 0.602292 | 4_2:-75083381 | Msa0622590:five_prime_UTR |
| GTTCTGGTACATATATCTTG+TGG | 0.618251 | 4_2:-75082108 | Msa0622590:intron |
| AATTATCCAAGATTGATGGA+GGG | 0.626335 | 4_2:-75079955 | Msa0622590:three_prime_UTR |
| CGTTGCAGGCGATGATGATG+TGG | 0.641934 | 4_2:+75083275 | None:intergenic |
| TCAAGGTGCTAAGAAACGCA+AGG | 0.648365 | 4_2:-75083329 | Msa0622590:CDS |
| AAACCTAGTTATACCCAAGA+CGG | 0.654127 | 4_2:-75082974 | Msa0622590:CDS |
| CATTTCAAGAGTTAATGGTG+TGG | 0.676075 | 4_2:-75079713 | Msa0622590:three_prime_UTR |
| TGCAGGCGATGATGATGTGG+CGG | 0.680633 | 4_2:+75083278 | None:intergenic |
| TCACCAAACAACGTTACCGG+TGG | 0.686562 | 4_2:+75083365 | None:intergenic |
| GACCATACCTCTGAACCTTG+TGG | 0.690357 | 4_2:+75080186 | None:intergenic |
| TTGGGTGATATTGTGCAACT+GGG | 0.699970 | 4_2:+75079976 | None:intergenic |
| TCATAGTCCAAGTATCCCAG+AGG | 0.764115 | 4_2:+75079779 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATAAATAAATAAATACT+AGG | + | chr4_2:75081752-75081771 | None:intergenic | 10.0% |
| !! | ATTTATTTATGAATTATATC+AGG | - | chr4_2:75081759-75081778 | Msa0622590:intron | 10.0% |
| !! | TTTATTTATGAATTATATCA+GGG | - | chr4_2:75081760-75081779 | Msa0622590:intron | 10.0% |
| !! | ATTTATTTATGAATTATATC+AGG | - | chr4_2:75081759-75081778 | Msa0622590:intron | 10.0% |
| !! | TTTATTTATGAATTATATCA+GGG | - | chr4_2:75081760-75081779 | Msa0622590:intron | 10.0% |
| !! | AGGTTATTTATGTAATAATT+AGG | - | chr4_2:75079927-75079946 | Msa0622590:three_prime_UTR | 15.0% |
| !! | TTATTTATGAATTATATCAG+GGG | - | chr4_2:75081761-75081780 | Msa0622590:intron | 15.0% |
| !! | TTATTTATGAATTATATCAG+GGG | - | chr4_2:75081761-75081780 | Msa0622590:intron | 15.0% |
| !! | ATTTATTTACGAATTATATC+AGG | - | chr4_2:75082569-75082588 | Msa0622590:intron | 15.0% |
| !!! | AACTTTTATAAATTGTGTAA+AGG | + | chr4_2:75083213-75083232 | None:intergenic | 15.0% |
| !! | AATTTATAAAAGTTCTTGTA+AGG | - | chr4_2:75083219-75083238 | Msa0622590:intron | 15.0% |
| !! | TCCATAAACTTATCTTAATA+GGG | - | chr4_2:75080363-75080382 | Msa0622590:intron | 20.0% |
| !! | CTGTATCTTGATTTAAAAAA+TGG | - | chr4_2:75080434-75080453 | Msa0622590:intron | 20.0% |
| !!! | AAGTATTGTGTATATATTGT+AGG | - | chr4_2:75080643-75080662 | Msa0622590:intron | 20.0% |
| !! | CTTCATTTATCTATATAGTT+TGG | + | chr4_2:75080760-75080779 | None:intergenic | 20.0% |
| !!! | TATACAAAATCCTTTTCATT+TGG | - | chr4_2:75081307-75081326 | Msa0622590:intron | 20.0% |
| !!! | ATACAAAATCCTTTTCATTT+GGG | - | chr4_2:75081308-75081327 | Msa0622590:intron | 20.0% |
| !! | TTCAGAATATTATAACAACA+TGG | + | chr4_2:75081407-75081426 | None:intergenic | 20.0% |
| !!! | AAAGAGTATTTTTTTAGAGA+AGG | + | chr4_2:75081465-75081484 | None:intergenic | 20.0% |
| !! | TTCAGAATATTATAACAACA+TGG | + | chr4_2:75081407-75081426 | None:intergenic | 20.0% |
| !!! | AAAGAGTATTTTTTTAGAGA+GGG | + | chr4_2:75081465-75081484 | None:intergenic | 20.0% |
| !! | TTCAGAATATTATAACAACA+TGG | + | chr4_2:75081407-75081426 | None:intergenic | 20.0% |
| !! | TTAAAGTTGCAATCAATATT+GGG | - | chr4_2:75082673-75082692 | Msa0622590:intron | 20.0% |
| !! | ATATTGGGACATATATAAAA+TGG | - | chr4_2:75082688-75082707 | Msa0622590:intron | 20.0% |
| !! | CTCTTGTAATGATTAATAAA+GGG | + | chr4_2:75082719-75082738 | None:intergenic | 20.0% |
| !! | TCTCTTGTAATGATTAATAA+AGG | + | chr4_2:75082720-75082739 | None:intergenic | 20.0% |
| ! | TACCTGATTTATTATTGAAC+AGG | - | chr4_2:75079907-75079926 | Msa0622590:three_prime_UTR | 25.0% |
| ! | AACCTGTTCAATAATAAATC+AGG | + | chr4_2:75079912-75079931 | None:intergenic | 25.0% |
| ! | TATAAGCTTATAGGTCTAAA+GGG | + | chr4_2:75080302-75080321 | None:intergenic | 25.0% |
| ! | TTATAAGCTTATAGGTCTAA+AGG | + | chr4_2:75080303-75080322 | None:intergenic | 25.0% |
| ! | TTTAGACCTATAAGCTTATA+AGG | - | chr4_2:75080302-75080321 | Msa0622590:intron | 25.0% |
| ! | TTAGACCTATAAGCTTATAA+GGG | - | chr4_2:75080303-75080322 | Msa0622590:intron | 25.0% |
| !!! | GCTTTTTCATTAAGCTTATA+AGG | - | chr4_2:75080325-75080344 | Msa0622590:intron | 25.0% |
| ! | CTCCATAAACTTATCTTAAT+AGG | - | chr4_2:75080362-75080381 | Msa0622590:intron | 25.0% |
| ! | TCCCTATTAAGATAAGTTTA+TGG | + | chr4_2:75080367-75080386 | None:intergenic | 25.0% |
| !! | TAATCCAAATTGTGTCTTTT+GGG | - | chr4_2:75080407-75080426 | Msa0622590:intron | 25.0% |
| ! | AGATTAAGTCAAAAAACCAT+TGG | + | chr4_2:75080473-75080492 | None:intergenic | 25.0% |
| !! | TCTGACTATGAAAAAGTTTT+AGG | + | chr4_2:75080701-75080720 | None:intergenic | 25.0% |
| !! | AATAATAATTTGCCGTAAAG+AGG | - | chr4_2:75081151-75081170 | Msa0622590:intron | 25.0% |
| !! | TACAAAATCCTTTTCATTTG+GGG | - | chr4_2:75081309-75081328 | Msa0622590:intron | 25.0% |
| !!! | GAAAGAGTATTTTTTTAGAG+AGG | + | chr4_2:75081466-75081485 | None:intergenic | 25.0% |
| !!! | AAAGAGTAACTTTTTAGAGA+AGG | + | chr4_2:75082275-75082294 | None:intergenic | 25.0% |
| ! | GTTAAAGTTGCAATCAATAT+TGG | - | chr4_2:75082672-75082691 | Msa0622590:intron | 25.0% |
| ! | TGAAACATTTCAAGAGTTAA+TGG | - | chr4_2:75083308-75083327 | Msa0622590:CDS | 25.0% |
| AATTTCAAATCACCTTGCTA+GGG | - | chr4_2:75079800-75079819 | Msa0622590:three_prime_UTR | 30.0% | |
| ATCTTAGCAAGTTGTTGATA+GGG | + | chr4_2:75080028-75080047 | None:intergenic | 30.0% | |
| AAAAGCCCTTATAAGCTTAT+AGG | + | chr4_2:75080311-75080330 | None:intergenic | 30.0% | |
| ! | AGCTTATAAGGACTTTTTGA+TGG | - | chr4_2:75080337-75080356 | Msa0622590:intron | 30.0% |
| ! | GCTTATAAGGACTTTTTGAT+GGG | - | chr4_2:75080338-75080357 | Msa0622590:intron | 30.0% |
| !! | TGGATTAGCTTCAAACTTAT+AGG | + | chr4_2:75080394-75080413 | None:intergenic | 30.0% |
| ! | CTAATCCAAATTGTGTCTTT+TGG | - | chr4_2:75080406-75080425 | Msa0622590:intron | 30.0% |
| ! | ATCTTCTGTAGTTTTTCTGT+CGG | - | chr4_2:75080489-75080508 | Msa0622590:intron | 30.0% |
| !! | GGGTATTTTTGTGAATAACA+TGG | - | chr4_2:75080511-75080530 | Msa0622590:intron | 30.0% |
| TTTGTGAATAACATGGTACT+CGG | - | chr4_2:75080518-75080537 | Msa0622590:intron | 30.0% | |
| ! | TACACAATACTTTTGCATGA+TGG | + | chr4_2:75080635-75080654 | None:intergenic | 30.0% |
| GATAATTCTTCACTTACTCT+TGG | - | chr4_2:75080819-75080838 | Msa0622590:intron | 30.0% | |
| !!! | GTGGTTTACTTTTAGAATGT+AGG | - | chr4_2:75080996-75081015 | Msa0622590:intron | 30.0% |
| ACAAAGATATGTCATCTACA+AGG | - | chr4_2:75081086-75081105 | Msa0622590:intron | 30.0% | |
| ! | AAATAGAGGACTTTGGAAAA+AGG | - | chr4_2:75081216-75081235 | Msa0622590:intron | 30.0% |
| ! | AATAGAGGACTTTGGAAAAA+GGG | - | chr4_2:75081217-75081236 | Msa0622590:intron | 30.0% |
| AAGAAATAGAGGAATTTGAG+AGG | - | chr4_2:75081253-75081272 | Msa0622590:intron | 30.0% | |
| ! | ACAAAATCCTTTTCATTTGG+GGG | - | chr4_2:75081310-75081329 | Msa0622590:intron | 30.0% |
| GAACTCAAAAATTGTATTGG+AGG | - | chr4_2:75081332-75081351 | Msa0622590:intron | 30.0% | |
| !!! | TATTGGAGGAGGATTTTTTA+GGG | - | chr4_2:75081346-75081365 | Msa0622590:intron | 30.0% |
| AGCAAATCTAATGAACCTAT+AGG | + | chr4_2:75081572-75081591 | None:intergenic | 30.0% | |
| AGCAAATCTAATGAACCTAT+AGG | + | chr4_2:75081572-75081591 | None:intergenic | 30.0% | |
| AGCAAATCTAATGAACCTAT+AGG | + | chr4_2:75081572-75081591 | None:intergenic | 30.0% | |
| TATCTGACAAATGTCATGAA+GGG | + | chr4_2:75082772-75082791 | None:intergenic | 30.0% | |
| !! | AATCCTTTGGCTTGATTAAA+GGG | - | chr4_2:75082811-75082830 | Msa0622590:intron | 30.0% |
| ! | CTTGGTAAATTTTCACTTTC+AGG | - | chr4_2:75082868-75082887 | Msa0622590:intron | 30.0% |
| ! | TGTGTATGCATTTTGTGATT+AGG | - | chr4_2:75082919-75082938 | Msa0622590:intron | 30.0% |
| ! | TGCATTTTGTGATTAGGAAT+CGG | - | chr4_2:75082925-75082944 | Msa0622590:intron | 30.0% |
| TCCATCAATCTTGGATAATT+GGG | + | chr4_2:75083071-75083090 | None:intergenic | 30.0% | |
| AATTATCCAAGATTGATGGA+GGG | - | chr4_2:75083071-75083090 | Msa0622590:CDS | 30.0% | |
| TGTACATGAAAAACTAACTC+AGG | + | chr4_2:75083135-75083154 | None:intergenic | 30.0% | |
| ! | TGTTTTCTTTCCCTAAATAG+AGG | + | chr4_2:75083179-75083198 | None:intergenic | 30.0% |
| ! | TGTGTAAATGGATTTAACCT+TGG | - | chr4_2:75083339-75083358 | Msa0622590:CDS | 30.0% |
| !!! | TCTCACAAGTGTTTTTTTAG+AGG | - | chr4_2:75083371-75083390 | Msa0622590:five_prime_UTR | 30.0% |
| !!! | CTCACAAGTGTTTTTTTAGA+GGG | - | chr4_2:75083372-75083391 | Msa0622590:five_prime_UTR | 30.0% |
| CAATTTCAAATCACCTTGCT+AGG | - | chr4_2:75079799-75079818 | Msa0622590:three_prime_UTR | 35.0% | |
| ! | GCATCGATAATTTCATGGAT+AGG | + | chr4_2:75079829-75079848 | None:intergenic | 35.0% |
| ! | CACATGCATCGATAATTTCA+TGG | + | chr4_2:75079834-75079853 | None:intergenic | 35.0% |
| GGGAAAATAATAAGCTAGAG+AGG | + | chr4_2:75080008-75080027 | None:intergenic | 35.0% | |
| CATCTTAGCAAGTTGTTGAT+AGG | + | chr4_2:75080029-75080048 | None:intergenic | 35.0% | |
| !! | CTATCAACAACTTGCTAAGA+TGG | - | chr4_2:75080027-75080046 | Msa0622590:CDS | 35.0% |
| AAACCTAGTTATACCCAAGA+CGG | - | chr4_2:75080052-75080071 | Msa0622590:CDS | 35.0% | |
| AAAAACCAGAAGAGAAGACA+AGG | + | chr4_2:75080137-75080156 | None:intergenic | 35.0% | |
| CAGATCTTCATAAGCACTTA+TGG | - | chr4_2:75080160-75080179 | Msa0622590:intron | 35.0% | |
| TCTAAAGGGATGAGTTAAAC+GGG | + | chr4_2:75080288-75080307 | None:intergenic | 35.0% | |
| GTCTAAAGGGATGAGTTAAA+CGG | + | chr4_2:75080289-75080308 | None:intergenic | 35.0% | |
| TGATCCCAAAAGACACAATT+TGG | + | chr4_2:75080414-75080433 | None:intergenic | 35.0% | |
| ! | TCTTCTGTAGTTTTTCTGTC+GGG | - | chr4_2:75080490-75080509 | Msa0622590:intron | 35.0% |
| !!! | AAAAAGTTTTAGGCTCATCC+CGG | + | chr4_2:75080691-75080710 | None:intergenic | 35.0% |
| GTTCTGGTACATATATCTTG+TGG | - | chr4_2:75080918-75080937 | Msa0622590:intron | 35.0% | |
| AAGGTTAATTAGGAGCAGAT+TGG | + | chr4_2:75080950-75080969 | None:intergenic | 35.0% | |
| TCTGCTCCTAATTAACCTTA+TGG | - | chr4_2:75080951-75080970 | Msa0622590:intron | 35.0% | |
| CTCCTAATTAACCTTATGGT+TGG | - | chr4_2:75080955-75080974 | Msa0622590:intron | 35.0% | |
| AGCCAACCATAAGGTTAATT+AGG | + | chr4_2:75080960-75080979 | None:intergenic | 35.0% | |
| !! | TTCTTTGAAGTGGTATCAGT+CGG | + | chr4_2:75081053-75081072 | None:intergenic | 35.0% |
| GATACCACTTCAAAGAATGT+AGG | - | chr4_2:75081056-75081075 | Msa0622590:intron | 35.0% | |
| ! | TAAGCCTACATTCTTTGAAG+TGG | + | chr4_2:75081063-75081082 | None:intergenic | 35.0% |
| GATATGTCATCTACAAGGTT+TGG | - | chr4_2:75081091-75081110 | Msa0622590:intron | 35.0% | |
| GGGGAACTCAAAAATTGTAT+TGG | - | chr4_2:75081329-75081348 | Msa0622590:intron | 35.0% | |
| CTCAAAAATTGTATTGGAGG+AGG | - | chr4_2:75081335-75081354 | Msa0622590:intron | 35.0% | |
| !!! | GTATTGGAGGAGGATTTTTT+AGG | - | chr4_2:75081345-75081364 | Msa0622590:intron | 35.0% |
| !!! | AGGAGGATTTTTTAGGGTTT+TGG | - | chr4_2:75081352-75081371 | Msa0622590:intron | 35.0% |
| !!! | GGAGGATTTTTTAGGGTTTT+GGG | - | chr4_2:75081353-75081372 | Msa0622590:intron | 35.0% |
| !!! | GAGGATTTTTTAGGGTTTTG+GGG | - | chr4_2:75081354-75081373 | Msa0622590:intron | 35.0% |
| !!! | AGGATTTTTTAGGGTTTTGG+GGG | - | chr4_2:75081355-75081374 | Msa0622590:intron | 35.0% |
| !! | TGAACCTATAGGCTTTGTTT+GGG | + | chr4_2:75081561-75081580 | None:intergenic | 35.0% |
| !! | ATGAACCTATAGGCTTTGTT+TGG | + | chr4_2:75081562-75081581 | None:intergenic | 35.0% |
| TTTGCTTATTAGTGCATGTC+TGG | - | chr4_2:75081586-75081605 | Msa0622590:intron | 35.0% | |
| !! | CCTTCAAGTTTGTTGCTTTA+TGG | + | chr4_2:75081642-75081661 | None:intergenic | 35.0% |
| CCATAAAGCAACAAACTTGA+AGG | - | chr4_2:75081639-75081658 | Msa0622590:intron | 35.0% | |
| AAGCAACAAACTTGAAGGAA+AGG | - | chr4_2:75081644-75081663 | Msa0622590:intron | 35.0% | |
| AGCAACAAACTTGAAGGAAA+GGG | - | chr4_2:75081645-75081664 | Msa0622590:intron | 35.0% | |
| !!! | CCATTTTGAGATTAGTCACT+AGG | + | chr4_2:75081729-75081748 | None:intergenic | 35.0% |
| CCTAGTGACTAATCTCAAAA+TGG | - | chr4_2:75081726-75081745 | Msa0622590:intron | 35.0% | |
| !! | TGAACCTATAGGCTTTGTTT+GGG | + | chr4_2:75081561-75081580 | None:intergenic | 35.0% |
| !! | ATGAACCTATAGGCTTTGTT+TGG | + | chr4_2:75081562-75081581 | None:intergenic | 35.0% |
| TTTGCTTATTAGTGCATGTC+TGG | - | chr4_2:75081586-75081605 | Msa0622590:intron | 35.0% | |
| !! | CCTTCAAGTTTGTTGCTTTA+TGG | + | chr4_2:75081642-75081661 | None:intergenic | 35.0% |
| CCATAAAGCAACAAACTTGA+AGG | - | chr4_2:75081639-75081658 | Msa0622590:intron | 35.0% | |
| AAGCAACAAACTTGAAGGAA+AGG | - | chr4_2:75081644-75081663 | Msa0622590:intron | 35.0% | |
| AGCAACAAACTTGAAGGAAA+GGG | - | chr4_2:75081645-75081664 | Msa0622590:intron | 35.0% | |
| !!! | CCATTTTGAGATTAGTCACT+AGG | + | chr4_2:75081729-75081748 | None:intergenic | 35.0% |
| CCTAGTGACTAATCTCAAAA+TGG | - | chr4_2:75081726-75081745 | Msa0622590:intron | 35.0% | |
| !! | TGAACCTATAGGCTTTGTTT+GGG | + | chr4_2:75081561-75081580 | None:intergenic | 35.0% |
| !! | ATGAACCTATAGGCTTTGTT+TGG | + | chr4_2:75081562-75081581 | None:intergenic | 35.0% |
| TTTGCTTATTAGTGCATGTC+TGG | - | chr4_2:75081586-75081605 | Msa0622590:intron | 35.0% | |
| !! | CCTTCAAGTTTGTTGCTTTA+TGG | + | chr4_2:75081642-75081661 | None:intergenic | 35.0% |
| CCATAAAGCAACAAACTTGA+AGG | - | chr4_2:75081639-75081658 | Msa0622590:intron | 35.0% | |
| AAGCAACAAACTTGAAGGAA+AGG | - | chr4_2:75081644-75081663 | Msa0622590:intron | 35.0% | |
| AGCAACAAACTTGAAGGAAA+GGG | - | chr4_2:75081645-75081664 | Msa0622590:intron | 35.0% | |
| !!! | CCATTTTGAGATTAGTCACT+GGG | + | chr4_2:75081729-75081748 | None:intergenic | 35.0% |
| GTAATCTGTACAATCAACTG+TGG | - | chr4_2:75082598-75082617 | Msa0622590:intron | 35.0% | |
| GTATCTGACAAATGTCATGA+AGG | + | chr4_2:75082773-75082792 | None:intergenic | 35.0% | |
| ATTTGTCAGATACCAGCATT+TGG | - | chr4_2:75082780-75082799 | Msa0622590:intron | 35.0% | |
| CTTTAATCAAGCCAAAGGAT+TGG | + | chr4_2:75082812-75082831 | None:intergenic | 35.0% | |
| !! | CAATCCTTTGGCTTGATTAA+AGG | - | chr4_2:75082810-75082829 | Msa0622590:intron | 35.0% |
| AAACCCTTTAATCAAGCCAA+AGG | + | chr4_2:75082817-75082836 | None:intergenic | 35.0% | |
| ! | ATTAAAGGGTTTTTGCCACA+AGG | - | chr4_2:75082825-75082844 | Msa0622590:intron | 35.0% |
| AGTTACTATGAACCTTTCTG+TGG | + | chr4_2:75082894-75082913 | None:intergenic | 35.0% | |
| ACCCAATTATCCAAGATTGA+TGG | - | chr4_2:75083067-75083086 | Msa0622590:CDS | 35.0% | |
| CTCCATCAATCTTGGATAAT+TGG | + | chr4_2:75083072-75083091 | None:intergenic | 35.0% | |
| CAATTATCCAAGATTGATGG+AGG | - | chr4_2:75083070-75083089 | Msa0622590:CDS | 35.0% | |
| ! | AAATAGAGGAGCACAAGAAA+AGG | + | chr4_2:75083165-75083184 | None:intergenic | 35.0% |
| TTTCTTGTGCTCCTCTATTT+AGG | - | chr4_2:75083165-75083184 | Msa0622590:intron | 35.0% | |
| TTCTTGTGCTCCTCTATTTA+GGG | - | chr4_2:75083166-75083185 | Msa0622590:intron | 35.0% | |
| CATTTCAAGAGTTAATGGTG+TGG | - | chr4_2:75083313-75083332 | Msa0622590:CDS | 35.0% | |
| ATGGTGTGGAATTGTGTAAA+TGG | - | chr4_2:75083327-75083346 | Msa0622590:CDS | 35.0% | |
| ! | GTAAATGGATTTAACCTTGG+CGG | - | chr4_2:75083342-75083361 | Msa0622590:exon | 35.0% |
| ! | ACGTTGTTTGGTGAGAGAAA+TGG | - | chr4_2:75079670-75079689 | Msa0622590:three_prime_UTR | 40.0% |
| ATCTAAAAGCTCACCGTCTT+GGG | + | chr4_2:75080068-75080087 | None:intergenic | 40.0% | |
| !!! | GGTGGTTTTGATATGACTAC+TGG | - | chr4_2:75080088-75080107 | Msa0622590:CDS | 40.0% |
| !! | GGTTTTGATATGACTACTGG+TGG | - | chr4_2:75080091-75080110 | Msa0622590:intron | 40.0% |
| TGGTAGTTTATCTGTGCCAA+TGG | - | chr4_2:75080454-75080473 | Msa0622590:intron | 40.0% | |
| ! | CTTCTGTAGTTTTTCTGTCG+GGG | - | chr4_2:75080491-75080510 | Msa0622590:intron | 40.0% |
| ATATTGTAGGCTGTAGCCTA+TGG | - | chr4_2:75080656-75080675 | Msa0622590:intron | 40.0% | |
| ! | TAGCCTATGGAATTTTCTCC+CGG | - | chr4_2:75080669-75080688 | Msa0622590:intron | 40.0% |
| !!! | AAAAGTTTTAGGCTCATCCC+GGG | + | chr4_2:75080690-75080709 | None:intergenic | 40.0% |
| TCATAGTCAGATAATCCCGT+AGG | - | chr4_2:75080710-75080729 | Msa0622590:intron | 40.0% | |
| TGCTAATAGAGCCAACCATA+AGG | + | chr4_2:75080969-75080988 | None:intergenic | 40.0% | |
| GCTCTATTAGCACAAAACTG+TGG | - | chr4_2:75080977-75080996 | Msa0622590:intron | 40.0% | |
| CCCTAGATAACTCCTCTTTA+CGG | + | chr4_2:75081166-75081185 | None:intergenic | 40.0% | |
| CCGTAAAGAGGAGTTATCTA+GGG | - | chr4_2:75081163-75081182 | Msa0622590:intron | 40.0% | |
| ! | TATCTAGGGCTCTGGTAAAA+AGG | - | chr4_2:75081177-75081196 | Msa0622590:intron | 40.0% |
| GTGGAAGAAATAGAGGACTT+TGG | - | chr4_2:75081209-75081228 | Msa0622590:intron | 40.0% | |
| ATAGAGGAATTTGAGAGGTG+AGG | - | chr4_2:75081258-75081277 | Msa0622590:intron | 40.0% | |
| TAGAGGAATTTGAGAGGTGA+GGG | - | chr4_2:75081259-75081278 | Msa0622590:intron | 40.0% | |
| TTGAGTTCCCCCAAATGAAA+AGG | + | chr4_2:75081320-75081339 | None:intergenic | 40.0% | |
| !!! | GGATTTTTTAGGGTTTTGGG+GGG | - | chr4_2:75081356-75081375 | Msa0622590:intron | 40.0% |
| !! | ATAGGCTTTGTTTGGGAGTT+TGG | + | chr4_2:75081554-75081573 | None:intergenic | 40.0% |
| AACTCCCAAACAAAGCCTAT+AGG | - | chr4_2:75081554-75081573 | Msa0622590:intron | 40.0% | |
| GCAACAAACTTGAAGGAAAG+GGG | - | chr4_2:75081646-75081665 | Msa0622590:intron | 40.0% | |
| AAACTTGAAGGAAAGGGGAT+TGG | - | chr4_2:75081651-75081670 | Msa0622590:intron | 40.0% | |
| !! | ATAGGCTTTGTTTGGGAGTT+TGG | + | chr4_2:75081554-75081573 | None:intergenic | 40.0% |
| AACTCCCAAACAAAGCCTAT+AGG | - | chr4_2:75081554-75081573 | Msa0622590:intron | 40.0% | |
| GCAACAAACTTGAAGGAAAG+GGG | - | chr4_2:75081646-75081665 | Msa0622590:intron | 40.0% | |
| AAACTTGAAGGAAAGGGGAT+TGG | - | chr4_2:75081651-75081670 | Msa0622590:intron | 40.0% | |
| !! | ATAGGCTTTGTTTGGGAGTT+TGG | + | chr4_2:75081554-75081573 | None:intergenic | 40.0% |
| AACTCCCAAACAAAGCCTAT+AGG | - | chr4_2:75081554-75081573 | Msa0622590:intron | 40.0% | |
| GCAACAAACTTGAAGGAAAG+GGG | - | chr4_2:75081646-75081665 | Msa0622590:intron | 40.0% | |
| AAACTTGAAGGAAAGGGGAT+TGG | - | chr4_2:75081651-75081670 | Msa0622590:intron | 40.0% | |
| CCCAGTGACTAATCTCAAAA+TGG | - | chr4_2:75082536-75082555 | Msa0622590:intron | 40.0% | |
| !!! | GCCATTTTGAGATTAGTCAC+TGG | + | chr4_2:75081730-75081749 | None:intergenic | 40.0% |
| TCTGTACAATCAACTGTGGT+TGG | - | chr4_2:75082602-75082621 | Msa0622590:intron | 40.0% | |
| CTGTACAATCAACTGTGGTT+GGG | - | chr4_2:75082603-75082622 | Msa0622590:intron | 40.0% | |
| ! | TTTGGAGCATACCAATCCTT+TGG | - | chr4_2:75082798-75082817 | Msa0622590:intron | 40.0% |
| ATGAAAAGACCCGCAAGAAA+AGG | - | chr4_2:75082954-75082973 | Msa0622590:CDS | 40.0% | |
| TGAAAAGACCCGCAAGAAAA+GGG | - | chr4_2:75082955-75082974 | Msa0622590:CDS | 40.0% | |
| ! | CATCTTTTCCCTTTTCTTGC+GGG | + | chr4_2:75082966-75082985 | None:intergenic | 40.0% |
| ! | CCATCTTTTCCCTTTTCTTG+CGG | + | chr4_2:75082967-75082986 | None:intergenic | 40.0% |
| AAGGGAAAAGATGGAGAAGA+AGG | - | chr4_2:75082973-75082992 | Msa0622590:CDS | 40.0% | |
| TGTCTTGACAAACTTAGGTC+TGG | + | chr4_2:75083002-75083021 | None:intergenic | 40.0% | |
| GTTCGTGTCTTGACAAACTT+AGG | + | chr4_2:75083007-75083026 | None:intergenic | 40.0% | |
| ! | ACACGAACTAGATAGTTTGC+TGG | - | chr4_2:75083019-75083038 | Msa0622590:CDS | 40.0% |
| TTGGGTGATATTGTGCAACT+GGG | + | chr4_2:75083053-75083072 | None:intergenic | 40.0% | |
| ATTGGGTGATATTGTGCAAC+TGG | + | chr4_2:75083054-75083073 | None:intergenic | 40.0% | |
| GTAAAACCCTCCATCAATCT+TGG | + | chr4_2:75083080-75083099 | None:intergenic | 40.0% | |
| CTCTCACCAAACAACGTTAC+CGG | + | chr4_2:75079667-75079686 | None:intergenic | 45.0% | |
| GTGAGAGAAATGGCGAATCA+AGG | - | chr4_2:75079680-75079699 | Msa0622590:three_prime_UTR | 45.0% | |
| ! | TCAAGGTGCTAAGAAACGCA+AGG | - | chr4_2:75079697-75079716 | Msa0622590:three_prime_UTR | 45.0% |
| ! | AGAGAAAGAGAGTACGTTGC+AGG | + | chr4_2:75079768-75079787 | None:intergenic | 45.0% |
| ATGGATAGGAAACCCTAGCA+AGG | + | chr4_2:75079815-75079834 | None:intergenic | 45.0% | |
| !! | TCTTCCATTCTAGCTTCACC+TGG | - | chr4_2:75079957-75079976 | Msa0622590:three_prime_UTR | 45.0% |
| !! | TTCACCTGGAAGCATTGGAT+TGG | - | chr4_2:75079971-75079990 | Msa0622590:three_prime_UTR | 45.0% |
| TCACCGTCTTGGGTATAACT+AGG | + | chr4_2:75080058-75080077 | None:intergenic | 45.0% | |
| CATCTAAAAGCTCACCGTCT+TGG | + | chr4_2:75080069-75080088 | None:intergenic | 45.0% | |
| ! | CAAGACGGTGAGCTTTTAGA+TGG | - | chr4_2:75080067-75080086 | Msa0622590:CDS | 45.0% |
| ATGACTACTGGTGGAGTTTG+CGG | - | chr4_2:75080100-75080119 | Msa0622590:intron | 45.0% | |
| ! | AGCCTATGGAATTTTCTCCC+GGG | - | chr4_2:75080670-75080689 | Msa0622590:intron | 45.0% |
| ATCCCGGGAGAAAATTCCAT+AGG | + | chr4_2:75080675-75080694 | None:intergenic | 45.0% | |
| TCAGATAATCCCGTAGGTCT+AGG | - | chr4_2:75080716-75080735 | Msa0622590:intron | 45.0% | |
| CAGATAATCCCGTAGGTCTA+GGG | - | chr4_2:75080717-75080736 | Msa0622590:intron | 45.0% | |
| !! | AAGAGTGTTCCCTAGACCTA+CGG | + | chr4_2:75080729-75080748 | None:intergenic | 45.0% |
| CCAGAACTTTCCAGAGATGA+TGG | + | chr4_2:75080905-75080924 | None:intergenic | 45.0% | |
| ! | CCATCATCTCTGGAAAGTTC+TGG | - | chr4_2:75080902-75080921 | Msa0622590:intron | 45.0% |
| GCCGTAAAGAGGAGTTATCT+AGG | - | chr4_2:75081162-75081181 | Msa0622590:intron | 45.0% | |
| ! | TAGGGCTCTGGTAAAAAGGA+AGG | - | chr4_2:75081181-75081200 | Msa0622590:intron | 45.0% |
| GGTAAAAAGGAAGGAGCAAG+TGG | - | chr4_2:75081190-75081209 | Msa0622590:intron | 45.0% | |
| GGAGCAAGTGGAAGAAATAG+AGG | - | chr4_2:75081202-75081221 | Msa0622590:intron | 45.0% | |
| ! | GAGGACTTTGGAAAAAGGGA+AGG | - | chr4_2:75081221-75081240 | Msa0622590:intron | 45.0% |
| GGAGCAAGTGGAAGAAATAG+AGG | - | chr4_2:75081202-75081221 | Msa0622590:intron | 45.0% | |
| TTTGGGGGGTGGGAAATATA+GGG | + | chr4_2:75081516-75081535 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr4_2:75081549-75081568 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr4_2:75081550-75081569 | None:intergenic | 45.0% |
| TTTGGGGGGTGGGAAATATA+GGG | + | chr4_2:75081516-75081535 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr4_2:75081549-75081568 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr4_2:75081550-75081569 | None:intergenic | 45.0% |
| TTTGGGGGGTGGGAAATATA+GGG | + | chr4_2:75081516-75081535 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr4_2:75081549-75081568 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr4_2:75081550-75081569 | None:intergenic | 45.0% |
| TGCAACATCCTTCACTGACA+CGG | - | chr4_2:75082741-75082760 | Msa0622590:intron | 45.0% | |
| GATTGGTATGCTCCAAATGC+TGG | + | chr4_2:75082795-75082814 | None:intergenic | 45.0% | |
| ! | GTTTTTGCCACAAGGTTCAG+AGG | - | chr4_2:75082833-75082852 | Msa0622590:intron | 45.0% |
| ! | CAGAGGTATGGTCAACATCT+TGG | - | chr4_2:75082850-75082869 | Msa0622590:intron | 45.0% |
| TTCACTTTCAGGCCACAGAA+AGG | - | chr4_2:75082879-75082898 | Msa0622590:intron | 45.0% | |
| CCGCAAGAAAAGGGAAAAGA+TGG | - | chr4_2:75082964-75082983 | Msa0622590:CDS | 45.0% | |
| !! | TTCTTGTAAGGACTAGCCTC+TGG | - | chr4_2:75083231-75083250 | Msa0622590:intron | 45.0% |
| !! | TCTTGTAAGGACTAGCCTCT+GGG | - | chr4_2:75083232-75083251 | Msa0622590:intron | 45.0% |
| TCATAGTCCAAGTATCCCAG+AGG | + | chr4_2:75083250-75083269 | None:intergenic | 45.0% | |
| TTGTGAGATTTACACCGCCA+AGG | + | chr4_2:75083359-75083378 | None:intergenic | 45.0% | |
| TCACCAAACAACGTTACCGG+TGG | + | chr4_2:75079664-75079683 | None:intergenic | 50.0% | |
| GCTTCCAGGTGAAGCTAGAA+TGG | + | chr4_2:75079964-75079983 | None:intergenic | 50.0% | |
| ! | CTAGCTTCACCTGGAAGCAT+TGG | - | chr4_2:75079966-75079985 | Msa0622590:three_prime_UTR | 50.0% |
| CAAGCCAATCCAATGCTTCC+AGG | + | chr4_2:75079978-75079997 | None:intergenic | 50.0% | |
| !! | CTGGAAGCATTGGATTGGCT+TGG | - | chr4_2:75079976-75079995 | Msa0622590:three_prime_UTR | 50.0% |
| ! | GACGGTGAGCTTTTAGATGG+TGG | - | chr4_2:75080070-75080089 | Msa0622590:CDS | 50.0% |
| TGACTACTGGTGGAGTTTGC+GGG | - | chr4_2:75080101-75080120 | Msa0622590:intron | 50.0% | |
| CTCTGCCTTGTCTTCTCTTC+TGG | - | chr4_2:75080129-75080148 | Msa0622590:intron | 50.0% | |
| ! | AGAGTGTTCCCTAGACCTAC+GGG | + | chr4_2:75080728-75080747 | None:intergenic | 50.0% |
| CAAGTCGCTTCCATCATCTC+TGG | - | chr4_2:75080892-75080911 | Msa0622590:intron | 50.0% | |
| ! | AGAGGAGTTATCTAGGGCTC+TGG | - | chr4_2:75081169-75081188 | Msa0622590:intron | 50.0% |
| GGAAAAAGGGAAGGAGCAAG+TGG | - | chr4_2:75081230-75081249 | Msa0622590:intron | 50.0% | |
| TTTGAGAGGTGAGGGCTTCA+CGG | - | chr4_2:75081267-75081286 | Msa0622590:intron | 50.0% | |
| ! | CTTTGGGGGGTGGGAAATAT+AGG | + | chr4_2:75081517-75081536 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr4_2:75081551-75081570 | None:intergenic | 50.0% |
| AGGGGATTGGATCGCTAAAC+AGG | - | chr4_2:75081664-75081683 | Msa0622590:intron | 50.0% | |
| GGATTGGATCGCTAAACAGG+AGG | - | chr4_2:75081667-75081686 | Msa0622590:intron | 50.0% | |
| TTGGATCGCTAAACAGGAGG+AGG | - | chr4_2:75081670-75081689 | Msa0622590:intron | 50.0% | |
| ! | CTTTGGGGGGTGGGAAATAT+AGG | + | chr4_2:75081517-75081536 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr4_2:75081551-75081570 | None:intergenic | 50.0% |
| AGGGGATTGGATCGCTAAAC+AGG | - | chr4_2:75081664-75081683 | Msa0622590:intron | 50.0% | |
| GGATTGGATCGCTAAACAGG+AGG | - | chr4_2:75081667-75081686 | Msa0622590:intron | 50.0% | |
| TTGGATCGCTAAACAGGAGG+AGG | - | chr4_2:75081670-75081689 | Msa0622590:intron | 50.0% | |
| ! | CTTTGGGGGGTGGGAAATAT+AGG | + | chr4_2:75081517-75081536 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr4_2:75081551-75081570 | None:intergenic | 50.0% |
| AGGGGATTGGATCGCTAAAC+AGG | - | chr4_2:75081664-75081683 | Msa0622590:intron | 50.0% | |
| GGATTGGATCGCTAAACAGG+AGG | - | chr4_2:75081667-75081686 | Msa0622590:intron | 50.0% | |
| TTGGATCGCTAAACAGGAGG+AGG | - | chr4_2:75081670-75081689 | Msa0622590:intron | 50.0% | |
| TGCCACAAGGTTCAGAGGTA+TGG | - | chr4_2:75082838-75082857 | Msa0622590:intron | 50.0% | |
| GACCATACCTCTGAACCTTG+TGG | + | chr4_2:75082843-75082862 | None:intergenic | 50.0% | |
| TCGCCACCGGTAACGTTGTT+TGG | - | chr4_2:75079658-75079677 | Msa0622590:three_prime_UTR | 55.0% | |
| ! | GATGATGATGTGGCGGAGCT+TGG | + | chr4_2:75079744-75079763 | None:intergenic | 55.0% |
| ! | TGCAGGCGATGATGATGTGG+CGG | + | chr4_2:75079751-75079770 | None:intergenic | 55.0% |
| ! | CGTTGCAGGCGATGATGATG+TGG | + | chr4_2:75079754-75079773 | None:intergenic | 55.0% |
| TTGAGAGGTGAGGGCTTCAC+GGG | - | chr4_2:75081268-75081287 | Msa0622590:intron | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | + | chr4_2:75081546-75081565 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | + | chr4_2:75081546-75081565 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | + | chr4_2:75081546-75081565 | None:intergenic | 55.0% | |
| !! | GGACTAGCCTCTGGGATACT+TGG | - | chr4_2:75083240-75083259 | Msa0622590:intron | 55.0% |
| AGCAGCGACTTCATCGCCAC+CGG | - | chr4_2:75079645-75079664 | Msa0622590:three_prime_UTR | 60.0% | |
| TGAGAGGTGAGGGCTTCACG+GGG | - | chr4_2:75081269-75081288 | Msa0622590:intron | 60.0% | |
| GGAGTTTGGAGGGGAGGAGA+GGG | + | chr4_2:75081540-75081559 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGGAGGAGA+GGG | + | chr4_2:75081540-75081559 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGGAGGAGA+GGG | + | chr4_2:75081540-75081559 | None:intergenic | 60.0% | |
| GGGAGCAACCGTGTCAGTGA+AGG | + | chr4_2:75082752-75082771 | None:intergenic | 60.0% | |
| !! | AGGAGAGGGCTTTGGGGGGT+GGG | + | chr4_2:75081526-75081545 | None:intergenic | 65.0% |
| ! | AGGGGAGGAGAGGGCTTTGG+GGG | + | chr4_2:75081531-75081550 | None:intergenic | 65.0% |
| GAGGGGAGGAGAGGGCTTTG+GGG | + | chr4_2:75081532-75081551 | None:intergenic | 65.0% | |
| GGAGGGGAGGAGAGGGCTTT+GGG | + | chr4_2:75081533-75081552 | None:intergenic | 65.0% | |
| TGGAGGGGAGGAGAGGGCTT+TGG | + | chr4_2:75081534-75081553 | None:intergenic | 65.0% | |
| GGGAGTTTGGAGGGGAGGAG+AGG | + | chr4_2:75081541-75081560 | None:intergenic | 65.0% | |
| !! | AGGAGAGGGCTTTGGGGGGT+GGG | + | chr4_2:75081526-75081545 | None:intergenic | 65.0% |
| ! | AGGGGAGGAGAGGGCTTTGG+GGG | + | chr4_2:75081531-75081550 | None:intergenic | 65.0% |
| GAGGGGAGGAGAGGGCTTTG+GGG | + | chr4_2:75081532-75081551 | None:intergenic | 65.0% | |
| GGAGGGGAGGAGAGGGCTTT+GGG | + | chr4_2:75081533-75081552 | None:intergenic | 65.0% | |
| TGGAGGGGAGGAGAGGGCTT+TGG | + | chr4_2:75081534-75081553 | None:intergenic | 65.0% | |
| GGGAGTTTGGAGGGGAGGAG+AGG | + | chr4_2:75081541-75081560 | None:intergenic | 65.0% | |
| !! | AGGAGAGGGCTTTGGGGGGT+GGG | + | chr4_2:75081526-75081545 | None:intergenic | 65.0% |
| ! | AGGGGAGGAGAGGGCTTTGG+GGG | + | chr4_2:75081531-75081550 | None:intergenic | 65.0% |
| GAGGGGAGGAGAGGGCTTTG+GGG | + | chr4_2:75081532-75081551 | None:intergenic | 65.0% | |
| GGAGGGGAGGAGAGGGCTTT+GGG | + | chr4_2:75081533-75081552 | None:intergenic | 65.0% | |
| TGGAGGGGAGGAGAGGGCTT+TGG | + | chr4_2:75081534-75081553 | None:intergenic | 65.0% | |
| GGGAGTTTGGAGGGGAGGAG+AGG | + | chr4_2:75081541-75081560 | None:intergenic | 65.0% | |
| !! | GAGGAGAGGGCTTTGGGGGG+TGG | + | chr4_2:75081527-75081546 | None:intergenic | 70.0% |
| !! | GGGGAGGAGAGGGCTTTGGG+GGG | + | chr4_2:75081530-75081549 | None:intergenic | 70.0% |
| !! | GAGGAGAGGGCTTTGGGGGG+TGG | + | chr4_2:75081527-75081546 | None:intergenic | 70.0% |
| !! | GGGGAGGAGAGGGCTTTGGG+GGG | + | chr4_2:75081530-75081549 | None:intergenic | 70.0% |
| !! | GAGGAGAGGGCTTTGGGGGG+TGG | + | chr4_2:75081527-75081546 | None:intergenic | 70.0% |
| !! | GGGGAGGAGAGGGCTTTGGG+GGG | + | chr4_2:75081530-75081549 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 75079612 | 75083436 | 75079612 | ID=Msa0622590;Name=Msa0622590 |
| chr4_2 | mRNA | 75079612 | 75083436 | 75079612 | ID=Msa0622590-mRNA-1;Parent=Msa0622590;Name=Msa0622590-mRNA-1;_AED=0.12;_eAED=0.12;_QI=77|1|1|1|1|1|5|403|173 |
| chr4_2 | exon | 75079612 | 75080107 | 75079612 | ID=Msa0622590-mRNA-1:exon:22770;Parent=Msa0622590-mRNA-1 |
| chr4_2 | exon | 75080194 | 75080259 | 75080194 | ID=Msa0622590-mRNA-1:exon:22769;Parent=Msa0622590-mRNA-1 |
| chr4_2 | exon | 75082109 | 75082193 | 75082109 | ID=Msa0622590-mRNA-1:exon:22768;Parent=Msa0622590-mRNA-1 |
| chr4_2 | exon | 75082926 | 75083119 | 75082926 | ID=Msa0622590-mRNA-1:exon:22767;Parent=Msa0622590-mRNA-1 |
| chr4_2 | exon | 75083276 | 75083436 | 75083276 | ID=Msa0622590-mRNA-1:exon:22766;Parent=Msa0622590-mRNA-1 |
| chr4_2 | five_prime_UTR | 75083360 | 75083436 | 75083360 | ID=Msa0622590-mRNA-1:five_prime_utr;Parent=Msa0622590-mRNA-1 |
| chr4_2 | CDS | 75083276 | 75083359 | 75083276 | ID=Msa0622590-mRNA-1:cds;Parent=Msa0622590-mRNA-1 |
| chr4_2 | CDS | 75082926 | 75083119 | 75082926 | ID=Msa0622590-mRNA-1:cds;Parent=Msa0622590-mRNA-1 |
| chr4_2 | CDS | 75082109 | 75082193 | 75082109 | ID=Msa0622590-mRNA-1:cds;Parent=Msa0622590-mRNA-1 |
| chr4_2 | CDS | 75080194 | 75080259 | 75080194 | ID=Msa0622590-mRNA-1:cds;Parent=Msa0622590-mRNA-1 |
| chr4_2 | CDS | 75080015 | 75080107 | 75080015 | ID=Msa0622590-mRNA-1:cds;Parent=Msa0622590-mRNA-1 |
| chr4_2 | three_prime_UTR | 75079612 | 75080014 | 75079612 | ID=Msa0622590-mRNA-1:three_prime_utr;Parent=Msa0622590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
