Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413130 | XP_013460286.1 | 99.829 | 586 | 1 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413130 | sp|P19251|ASNS1_PEA | 95.051 | 586 | 29 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413130 | A0A072UXM4 | 99.829 | 586 | 1 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1221 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0413130 | -0.809566 | 1.775791e-50 | -8.615850e-47 |
| Msa0011920 | Msa0413130 | -0.831507 | 1.604771e-55 | -8.615850e-47 |
| Msa0030050 | Msa0413130 | 0.807465 | 4.988635e-50 | -8.615850e-47 |
| Msa0036560 | Msa0413130 | -0.815536 | 8.791682e-52 | -8.615850e-47 |
| Msa0037180 | Msa0413130 | 0.818367 | 2.033943e-52 | -8.615850e-47 |
| Msa0037280 | Msa0413130 | 0.815479 | 9.052295e-52 | -8.615850e-47 |
| Msa0037650 | Msa0413130 | -0.830875 | 2.295980e-55 | -8.615850e-47 |
| Msa0037720 | Msa0413130 | 0.855775 | 5.031748e-62 | -8.615850e-47 |
| Msa0076640 | Msa0413130 | 0.811024 | 8.609658e-51 | -8.615850e-47 |
| Msa0081700 | Msa0413130 | -0.822250 | 2.619624e-53 | -8.615850e-47 |
| Msa0083240 | Msa0413130 | 0.842104 | 3.169268e-58 | -8.615850e-47 |
| Msa0087550 | Msa0413130 | 0.806121 | 9.592731e-50 | -8.615850e-47 |
| Msa0092220 | Msa0413130 | 0.826172 | 3.138448e-54 | -8.615850e-47 |
| Msa0093740 | Msa0413130 | 0.985798 | 1.059892e-164 | -8.615850e-47 |
| Msa0099090 | Msa0413130 | -0.800674 | 1.290272e-48 | -8.615850e-47 |
| Msa0099350 | Msa0413130 | -0.807011 | 6.224677e-50 | -8.615850e-47 |
| Msa0099430 | Msa0413130 | -0.808683 | 2.745128e-50 | -8.615850e-47 |
| Msa0127910 | Msa0413130 | -0.814385 | 1.582513e-51 | -8.615850e-47 |
| Msa0129640 | Msa0413130 | 0.806799 | 6.902307e-50 | -8.615850e-47 |
| Msa0134270 | Msa0413130 | 0.805220 | 1.482620e-49 | -8.615850e-47 |
| Msa0139280 | Msa0413130 | -0.810145 | 1.333075e-50 | -8.615850e-47 |
| Msa0148000 | Msa0413130 | -0.811596 | 6.469630e-51 | -8.615850e-47 |
| Msa0150330 | Msa0413130 | 0.803063 | 4.167674e-49 | -8.615850e-47 |
| Msa0159240 | Msa0413130 | -0.802575 | 5.258034e-49 | -8.615850e-47 |
| Msa0174060 | Msa0413130 | -0.824348 | 8.474218e-54 | -8.615850e-47 |
| Msa0177320 | Msa0413130 | 0.802969 | 4.358081e-49 | -8.615850e-47 |
| Msa0223590 | Msa0413130 | 0.817471 | 3.240797e-52 | -8.615850e-47 |
| Msa0224210 | Msa0413130 | 0.809208 | 2.119731e-50 | -8.615850e-47 |
| Msa0225070 | Msa0413130 | -0.806842 | 6.760003e-50 | -8.615850e-47 |
| Msa0236690 | Msa0413130 | -0.807681 | 4.487932e-50 | -8.615850e-47 |
| Msa0381470 | Msa0413130 | 0.844275 | 8.361007e-59 | -8.615850e-47 |
| Msa0386890 | Msa0413130 | 0.811712 | 6.103603e-51 | -8.615850e-47 |
| Msa0389570 | Msa0413130 | -0.805729 | 1.159919e-49 | -8.615850e-47 |
| Msa0390590 | Msa0413130 | -0.814413 | 1.560344e-51 | -8.615850e-47 |
| Msa0390790 | Msa0413130 | 0.805331 | 1.405759e-49 | -8.615850e-47 |
| Msa0413130 | Msa0458220 | 0.943123 | 2.119644e-102 | -8.615850e-47 |
| Msa0413130 | Msa0470920 | 0.812293 | 4.560170e-51 | -8.615850e-47 |
| Msa0413130 | Msa0504700 | 0.928423 | 2.950022e-92 | -8.615850e-47 |
| Msa0413130 | Msa0519910 | 0.840194 | 1.007226e-57 | -8.615850e-47 |
| Msa0413130 | Msa0524370 | 0.806430 | 8.259294e-50 | -8.615850e-47 |
| Msa0413130 | Msa0538050 | -0.828511 | 8.633891e-55 | -8.615850e-47 |
| Msa0413130 | Msa0560280 | 0.804800 | 1.815044e-49 | -8.615850e-47 |
| Msa0413130 | Msa0563230 | -0.803948 | 2.731683e-49 | -8.615850e-47 |
| Msa0413130 | Msa0563440 | 0.803083 | 4.129105e-49 | -8.615850e-47 |
| Msa0413130 | Msa0566930 | 0.815875 | 7.389531e-52 | -8.615850e-47 |
| Msa0413130 | Msa0593600 | 0.813283 | 2.768395e-51 | -8.615850e-47 |
| Msa0413130 | Msa0595530 | 0.801910 | 7.204232e-49 | -8.615850e-47 |
| Msa0413130 | Msa0614290 | 0.807229 | 5.597289e-50 | -8.615850e-47 |
| Msa0413130 | Msa0617470 | -0.814815 | 1.270938e-51 | -8.615850e-47 |
| Msa0413130 | Msa0621670 | -0.815994 | 6.950172e-52 | -8.615850e-47 |
| Msa0413130 | Msa0622590 | 0.801481 | 8.825147e-49 | -8.615850e-47 |
| Msa0413130 | Msa0638820 | 0.806099 | 9.697383e-50 | -8.615850e-47 |
| Msa0413130 | Msa0639530 | -0.810686 | 1.018735e-50 | -8.615850e-47 |
| Msa0413130 | Msa0672980 | 0.803381 | 3.581734e-49 | -8.615850e-47 |
| Msa0413130 | Msa0697510 | 0.802348 | 5.855369e-49 | -8.615850e-47 |
| Msa0413130 | Msa0697520 | 0.805619 | 1.223313e-49 | -8.615850e-47 |
| Msa0413130 | Msa0700250 | -0.811200 | 7.886827e-51 | -8.615850e-47 |
| Msa0413130 | Msa0781800 | 0.800531 | 1.379449e-48 | -8.615850e-47 |
| Msa0413130 | Msa0826380 | 0.807451 | 5.021620e-50 | -8.615850e-47 |
| Msa0413130 | Msa0826450 | 0.808241 | 3.412001e-50 | -8.615850e-47 |
| Msa0413130 | Msa0828350 | 0.803912 | 2.778988e-49 | -8.615850e-47 |
| Msa0413130 | Msa0898090 | -0.811047 | 8.512371e-51 | -8.615850e-47 |
| Msa0413130 | Msa0913520 | 0.810113 | 1.354770e-50 | -8.615850e-47 |
| Msa0413130 | Msa0924690 | -0.838576 | 2.649584e-57 | -8.615850e-47 |
| Msa0413130 | Msa0931550 | -0.829376 | 5.328859e-55 | -8.615850e-47 |
| Msa0413130 | Msa0963800 | -0.839143 | 1.889742e-57 | -8.615850e-47 |
| Msa0413130 | Msa0967900 | -0.801151 | 1.030955e-48 | -8.615850e-47 |
| Msa0413130 | Msa1157200 | 0.824289 | 8.749310e-54 | -8.615850e-47 |
| Msa0413130 | Msa1159300 | -0.802676 | 5.010792e-49 | -8.615850e-47 |
| Msa0413130 | Msa1171510 | 0.998240 | 1.212251e-259 | -8.615850e-47 |
| Msa0413130 | Msa1202470 | 0.821001 | 5.091385e-53 | -8.615850e-47 |
| Msa0413130 | Msa1202710 | -0.802399 | 5.713633e-49 | -8.615850e-47 |
| Msa0413130 | Msa1208530 | 0.819854 | 9.334797e-53 | -8.615850e-47 |
| Msa0413130 | Msa1254910 | 0.803348 | 3.638933e-49 | -8.615850e-47 |
| Msa0413130 | Msa1276400 | 0.829924 | 3.920349e-55 | -8.615850e-47 |
| Msa0413130 | Msa1299220 | 0.808829 | 2.554624e-50 | -8.615850e-47 |
| Msa0413130 | Msa1326180 | 0.808807 | 2.583305e-50 | -8.615850e-47 |
| Msa0413130 | Msa1344930 | 0.804839 | 1.781686e-49 | -8.615850e-47 |
| Msa0413130 | Msa1348860 | -0.804415 | 2.184606e-49 | -8.615850e-47 |
| Msa0413130 | Msa1361040 | 0.815462 | 9.133514e-52 | -8.615850e-47 |
| Msa0413130 | Msa1368400 | 0.811337 | 7.363007e-51 | -8.615850e-47 |
| Msa0413130 | Msa1369830 | 0.809782 | 1.596232e-50 | -8.615850e-47 |
| Msa0413130 | Msa1375640 | 0.800337 | 1.511302e-48 | -8.615850e-47 |
| Msa0413130 | Msa1377980 | -0.804598 | 2.000811e-49 | -8.615850e-47 |
| Msa0413130 | Msa1384410 | -0.818308 | 2.097715e-52 | -8.615850e-47 |
| Msa0413130 | Msa1398450 | -0.817208 | 3.715751e-52 | -8.615850e-47 |
| Msa0413130 | Msa1401550 | 0.815180 | 1.055228e-51 | -8.615850e-47 |
| Msa0413130 | Msa1408280 | -0.802154 | 6.419181e-49 | -8.615850e-47 |
| Msa0413130 | Msa1411370 | 0.800030 | 1.744792e-48 | -8.615850e-47 |
| Msa0413130 | Msa1427860 | 0.804148 | 2.482218e-49 | -8.615850e-47 |
| Msa0413130 | Msa1439860 | 0.803751 | 3.002246e-49 | -8.615850e-47 |
| Msa0264890 | Msa0413130 | 0.812725 | 3.668461e-51 | -8.615850e-47 |
| Msa0285420 | Msa0413130 | 0.827832 | 1.258138e-54 | -8.615850e-47 |
| Msa0304350 | Msa0413130 | -0.804950 | 1.689280e-49 | -8.615850e-47 |
| Msa0305910 | Msa0413130 | -0.803001 | 4.293628e-49 | -8.615850e-47 |
| Msa0324220 | Msa0413130 | 0.827284 | 1.702811e-54 | -8.615850e-47 |
| Msa0340270 | Msa0413130 | 0.821739 | 3.440765e-53 | -8.615850e-47 |
| Msa0340830 | Msa0413130 | -0.803607 | 3.215261e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413130 | MtrunA17_Chr3g0105311 | 99.829 | 586 | 1 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1221 |
| Msa0413130 | MtrunA17_Chr5g0430381 | 86.007 | 586 | 80 | 2 | 1 | 586 | 1 | 584 | 0.0 | 1056 |
| Msa0413130 | MtrunA17_Chr3g0123991 | 75.714 | 560 | 135 | 1 | 1 | 560 | 1 | 559 | 0.0 | 915 |
| Msa0413130 | MtrunA17_Chr5g0429171 | 72.727 | 77 | 20 | 1 | 510 | 586 | 30 | 105 | 6.66e-28 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413130 | AT3G47340.1 | 81.942 | 587 | 102 | 3 | 1 | 586 | 1 | 584 | 0.0 | 1021 |
| Msa0413130 | AT5G10240.1 | 78.919 | 555 | 116 | 1 | 1 | 555 | 1 | 554 | 0.0 | 945 |
| Msa0413130 | AT5G65010.1 | 78.403 | 551 | 118 | 1 | 1 | 551 | 1 | 550 | 0.0 | 936 |
| Msa0413130 | AT5G10240.2 | 78.378 | 555 | 118 | 2 | 1 | 555 | 1 | 553 | 0.0 | 934 |
| Msa0413130 | AT5G65010.2 | 78.442 | 552 | 117 | 2 | 1 | 551 | 1 | 551 | 0.0 | 933 |
| Msa0413130 | AT3G47340.2 | 84.479 | 509 | 78 | 1 | 1 | 509 | 1 | 508 | 0.0 | 925 |
| Msa0413130 | AT3G47340.3 | 84.450 | 418 | 64 | 1 | 1 | 418 | 1 | 417 | 0.0 | 766 |
| Msa0413130 | AT3G47340.4 | 83.828 | 303 | 48 | 1 | 116 | 418 | 1 | 302 | 0.0 | 550 |
Find 145 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACACTATCATATTGTAATT+TGG | 0.171106 | 3_2:-57351852 | Msa0413130:three_prime_UTR |
| CTTCTTTGTTTGGTGCCTTA+TGG | 0.206839 | 3_2:+57353290 | None:intergenic |
| TGAATTTCAGTTTACTATTC+AGG | 0.209606 | 3_2:-57354091 | Msa0413130:intron |
| AATAATATTCTGGCTTTATT+AGG | 0.218404 | 3_2:+57352034 | None:intergenic |
| TGGATTGCATCAGAATTAAA+AGG | 0.220309 | 3_2:-57354752 | Msa0413130:CDS |
| GGAGTCAAATGGGTGATTTC+TGG | 0.221522 | 3_2:-57353352 | Msa0413130:CDS |
| CAAAGACAATAGTTTCTATA+AGG | 0.244961 | 3_2:+57356754 | None:intergenic |
| TCTATAGTAATATGCTTCTT+TGG | 0.249070 | 3_2:+57352499 | None:intergenic |
| AGATTAGAAATTTCCATCTT+TGG | 0.261394 | 3_2:+57352104 | None:intergenic |
| CTTCTCTGGCTCTACAGTTT+TGG | 0.272062 | 3_2:+57352133 | None:intergenic |
| GCCATTGTTGATCCTGCTTC+TGG | 0.280821 | 3_2:-57355367 | Msa0413130:CDS |
| CCAACATGGTGATAACTATT+TGG | 0.283627 | 3_2:-57355404 | Msa0413130:CDS |
| TTACCTTGCGGCATGTTTCT+TGG | 0.286349 | 3_2:+57353260 | None:intergenic |
| TGGTTGGATTGATGGTATTA+AGG | 0.289578 | 3_2:-57352690 | Msa0413130:CDS |
| CTATTGAGTGGGATGCTTCT+TGG | 0.291336 | 3_2:-57352235 | Msa0413130:CDS |
| AAGATGGAAATTTCTAATCT+TGG | 0.303255 | 3_2:-57352101 | Msa0413130:CDS |
| CACTTCCTTGTACATTGGTT+GGG | 0.316283 | 3_2:-57354885 | Msa0413130:CDS |
| GATTACAGGCTGTGATAAAA+AGG | 0.326265 | 3_2:-57354447 | Msa0413130:intron |
| TGTTGTTAGTATGAAGAGTA+TGG | 0.328585 | 3_2:-57355004 | Msa0413130:intron |
| TGGTGAAACTCTTCTTTGTT+TGG | 0.329318 | 3_2:+57353280 | None:intergenic |
| TGGAGGTTTGGATTCTTCAT+TGG | 0.339121 | 3_2:-57354389 | Msa0413130:CDS |
| AAAATGCTATGTTATGTATA+AGG | 0.341275 | 3_2:-57351948 | Msa0413130:three_prime_UTR |
| CTACTTCTCTTCCAGCCTTA+AGG | 0.348738 | 3_2:+57354139 | None:intergenic |
| CTCATTCTGTGTAGGGCTTA+AGG | 0.348833 | 3_2:-57354299 | Msa0413130:intron |
| TATGTAGTATAATAATATTC+TGG | 0.351740 | 3_2:+57352024 | None:intergenic |
| TCGGCAAGACTAACGGTTCC+TGG | 0.359524 | 3_2:-57352290 | Msa0413130:CDS |
| ATCTTTGGTATAATCTTCTC+TGG | 0.371278 | 3_2:+57352119 | None:intergenic |
| CATTGATCCCGAGTACAAAA+TGG | 0.371781 | 3_2:-57353023 | Msa0413130:intron |
| TTGTTATTGTAGGTTCTGTT+TGG | 0.373539 | 3_2:-57354772 | Msa0413130:intron |
| GTTGGCTATGGTTGGATTGA+TGG | 0.373548 | 3_2:-57352698 | Msa0413130:CDS |
| TATCATAAAATTCAGGTGAA+TGG | 0.381079 | 3_2:-57355210 | Msa0413130:intron |
| AAAGACAATAGTTTCTATAA+GGG | 0.381439 | 3_2:+57356755 | None:intergenic |
| CACAAAAGCTGCTAAGCAAT+GGG | 0.383437 | 3_2:-57354335 | Msa0413130:CDS |
| TACATTGGTTGGGGACTAGA+TGG | 0.386232 | 3_2:-57354875 | Msa0413130:intron |
| CTCAAAACTAGAGGATCATA+AGG | 0.390752 | 3_2:+57354605 | None:intergenic |
| TCACTTCCTTGTACATTGGT+TGG | 0.403117 | 3_2:-57354886 | Msa0413130:CDS |
| TGTGTACGGAATTTGTGATT+AGG | 0.411870 | 3_2:+57355150 | None:intergenic |
| CATATGATGTAACCACAATC+AGG | 0.412177 | 3_2:-57353420 | Msa0413130:CDS |
| TCAAATCATCAGGAGTCAAA+TGG | 0.416775 | 3_2:-57353363 | Msa0413130:CDS |
| TTAGGGTGCACCTGACCTTA+AGG | 0.420678 | 3_2:-57354154 | Msa0413130:intron |
| TGGTGGAGCCCACTCCAGTC+TGG | 0.424835 | 3_2:+57355424 | None:intergenic |
| CCATCTGGAAGAGCAGCATT+TGG | 0.431726 | 3_2:-57352197 | Msa0413130:CDS |
| AGAGAAGATTATACCAAAGA+TGG | 0.434916 | 3_2:-57352117 | Msa0413130:CDS |
| CTTTGAGAGGTCTTTCCCTC+AGG | 0.440586 | 3_2:-57352471 | Msa0413130:intron |
| GCCTTGATAAAATACACAAC+AGG | 0.442959 | 3_2:+57351971 | None:intergenic |
| AGGGTATTTGTATTTCCATA+AGG | 0.443024 | 3_2:-57353305 | Msa0413130:CDS |
| AGAGGATCATAAGGGGTTGT+TGG | 0.444662 | 3_2:+57354614 | None:intergenic |
| GGTGTCACTTCCTTGTACAT+TGG | 0.452637 | 3_2:-57354890 | Msa0413130:CDS |
| TGTGGTATACTTGCTGTACT+TGG | 0.453089 | 3_2:-57356719 | Msa0413130:CDS |
| GAATCGAGAAATGGATACTA+AGG | 0.458386 | 3_2:-57352893 | Msa0413130:CDS |
| TCAAAACTAGAGGATCATAA+GGG | 0.460214 | 3_2:+57354606 | None:intergenic |
| TGTCTCATATTAGCTTTGAA+TGG | 0.461591 | 3_2:+57352073 | None:intergenic |
| TCAAGCAACCTTGATCCATC+TGG | 0.462431 | 3_2:-57352212 | Msa0413130:CDS |
| TAGAGTACCTTAGGCAGATA+AGG | 0.471099 | 3_2:+57352846 | None:intergenic |
| AAGAAGGAAGAATCGAGAAA+TGG | 0.471711 | 3_2:-57352902 | Msa0413130:CDS |
| TCTCTTCCAGCCTTAAGGTC+AGG | 0.474929 | 3_2:+57354144 | None:intergenic |
| ACTTCCTTGTACATTGGTTG+GGG | 0.475172 | 3_2:-57354884 | Msa0413130:CDS |
| TAATATGCTTCTTTGGTAAG+TGG | 0.476674 | 3_2:+57352506 | None:intergenic |
| TCTCGAAAGATCAAATCATC+AGG | 0.483191 | 3_2:-57353373 | Msa0413130:CDS |
| TGAAGCACCGTGGTCCAGAC+TGG | 0.485903 | 3_2:-57355438 | Msa0413130:CDS |
| CTGTGATGTTATTGCACACC+TGG | 0.486927 | 3_2:-57355121 | Msa0413130:intron |
| TTTCAGATAAAACATGAAGA+AGG | 0.488675 | 3_2:-57352918 | Msa0413130:intron |
| TTATGTTAAATTTGAATGCA+AGG | 0.489283 | 3_2:-57351806 | Msa0413130:three_prime_UTR |
| TGCAGATCAAAGCTCTTCAT+AGG | 0.490172 | 3_2:-57353141 | Msa0413130:intron |
| AAATTACACTCATTCTGTGT+AGG | 0.494980 | 3_2:-57354307 | Msa0413130:CDS |
| CAAATCATCAGGAGTCAAAT+GGG | 0.497991 | 3_2:-57353362 | Msa0413130:CDS |
| GCACAAAAGCTGCTAAGCAA+TGG | 0.498472 | 3_2:-57354336 | Msa0413130:CDS |
| CAACAGTTTCATTGTTGCAA+GGG | 0.499051 | 3_2:-57354921 | Msa0413130:CDS |
| ATTGTTGCAAGGGATGCTAT+AGG | 0.499242 | 3_2:-57354911 | Msa0413130:CDS |
| AAATAAATCAACATATGCAT+GGG | 0.500130 | 3_2:-57353101 | Msa0413130:CDS |
| TTGGTAAGTGGAGTGTTGAA+AGG | 0.504831 | 3_2:+57352518 | None:intergenic |
| CTGCTCTTCCAGATGGATCA+AGG | 0.507380 | 3_2:+57352204 | None:intergenic |
| TTTGAGTCTTGCCTTCTCAA+AGG | 0.510674 | 3_2:+57354577 | None:intergenic |
| CCAAATGCTGCTCTTCCAGA+TGG | 0.513203 | 3_2:+57352197 | None:intergenic |
| AAGACCGGGAGTTTCGTAGA+TGG | 0.513657 | 3_2:-57354670 | Msa0413130:CDS |
| GGATTGCATCAGAATTAAAA+GGG | 0.514030 | 3_2:-57354751 | Msa0413130:CDS |
| GTGATGGAGTTGGCTATGGT+TGG | 0.516816 | 3_2:-57352706 | Msa0413130:CDS |
| CTGATGACTCACAAGCTAAG+AGG | 0.518775 | 3_2:-57356691 | Msa0413130:CDS |
| TCTACAATCATGAAGACCTC+AGG | 0.520006 | 3_2:-57355182 | Msa0413130:CDS |
| ATTTGTACTCGAGCAAAGAC+CGG | 0.520883 | 3_2:-57354685 | Msa0413130:CDS |
| TTCAGTGATGGAGTTGGCTA+TGG | 0.523214 | 3_2:-57352710 | Msa0413130:CDS |
| CAAATAAATCAACATATGCA+TGG | 0.524556 | 3_2:-57353102 | Msa0413130:CDS |
| AATTACACTCATTCTGTGTA+GGG | 0.525633 | 3_2:-57354306 | Msa0413130:CDS |
| AGAGGTTGATCACCAGAAGC+AGG | 0.531123 | 3_2:+57355355 | None:intergenic |
| ATAACTATTTGGCTCATCAA+AGG | 0.533219 | 3_2:-57355393 | Msa0413130:CDS |
| GGTGCACCTGACCTTAAGGC+TGG | 0.541650 | 3_2:-57354150 | Msa0413130:CDS |
| AGAAAATCCTTATCTGCCTA+AGG | 0.542451 | 3_2:-57352853 | Msa0413130:intron |
| TTTAAAAGAAAGACTAGATG+TGG | 0.542999 | 3_2:+57351891 | None:intergenic |
| TAGTAAACTGAAATTCATGA+TGG | 0.544517 | 3_2:+57354097 | None:intergenic |
| AATAGTTATCACCATGTTGG+TGG | 0.545301 | 3_2:+57355407 | None:intergenic |
| AAATGGGTGATTTCTGGAGA+AGG | 0.550290 | 3_2:-57353346 | Msa0413130:CDS |
| ACCGTGGTCCAGACTGGAGT+GGG | 0.551709 | 3_2:-57355432 | Msa0413130:CDS |
| TTTGTACTCGAGCAAAGACC+GGG | 0.553206 | 3_2:-57354684 | Msa0413130:CDS |
| CAGAAGGAACAGTTCAGTGA+TGG | 0.554559 | 3_2:-57352722 | Msa0413130:CDS |
| AGGTGTTGCTGCCCTGATTG+TGG | 0.554777 | 3_2:+57353408 | None:intergenic |
| ACAACAGTTTCATTGTTGCA+AGG | 0.557383 | 3_2:-57354922 | Msa0413130:CDS |
| ATTGGATAAAATGTGAAGAG+AGG | 0.559792 | 3_2:+57356808 | None:intergenic |
| TTTGAGGAATGCCTTTGAGA+AGG | 0.562136 | 3_2:-57354588 | Msa0413130:intron |
| GGATTTCATAAAAGTTGCAA+TGG | 0.566188 | 3_2:-57353047 | Msa0413130:CDS |
| TTTCGAGACATCAGAAACAT+AGG | 0.569570 | 3_2:+57353388 | None:intergenic |
| GCATCCTTGAGCTTTCTCGC+AGG | 0.571788 | 3_2:-57356664 | Msa0413130:intron |
| CATCACAGTCACATTGTGTA+CGG | 0.573999 | 3_2:+57355136 | None:intergenic |
| TGATGACTCACAAGCTAAGA+GGG | 0.575223 | 3_2:-57356690 | Msa0413130:CDS |
| AGCAGTTACTGCTAGATACC+TGG | 0.575470 | 3_2:-57354362 | Msa0413130:CDS |
| GTAGAACTCGGCAAGACTAA+CGG | 0.589213 | 3_2:-57352297 | Msa0413130:intron |
| CATGCAACACTAGCTCCTCC+AGG | 0.589828 | 3_2:+57352272 | None:intergenic |
| GAACAGTTCAGTGATGGAGT+TGG | 0.592459 | 3_2:-57352716 | Msa0413130:CDS |
| CGAGAAATGGATACTAAGGA+AGG | 0.594712 | 3_2:-57352889 | Msa0413130:CDS |
| TATAGTCAATAATTGCATAG+AGG | 0.594968 | 3_2:-57352003 | Msa0413130:three_prime_UTR |
| TTGATGACTGATGTGCCGTT+CGG | 0.596910 | 3_2:-57354424 | Msa0413130:CDS |
| ACTATAGAATGATCTTTGAG+AGG | 0.598679 | 3_2:-57352484 | Msa0413130:CDS |
| AAAACAAGGTGCAAAGAGTG+TGG | 0.599956 | 3_2:+57356857 | None:intergenic |
| CCAAATAGTTATCACCATGT+TGG | 0.601085 | 3_2:+57355404 | None:intergenic |
| GGATGGCATAGATGCAATTG+AGG | 0.606055 | 3_2:-57353464 | Msa0413130:CDS |
| ATTGCCTGCGAGAAAGCTCA+AGG | 0.606762 | 3_2:+57356660 | None:intergenic |
| GTAGATGGTACAATCCTCCA+TGG | 0.607175 | 3_2:-57354655 | Msa0413130:CDS |
| TAGTCCCCAACCAATGTACA+AGG | 0.608478 | 3_2:+57354880 | None:intergenic |
| CACAGAGAAAGCTATTGAGT+GGG | 0.608617 | 3_2:-57352246 | Msa0413130:CDS |
| GCACAGAGAAAGCTATTGAG+TGG | 0.609213 | 3_2:-57352247 | Msa0413130:CDS |
| GATTTGTCTTCATTGAAGAG+AGG | 0.610358 | 3_2:+57355337 | None:intergenic |
| CACCGTGGTCCAGACTGGAG+TGG | 0.611314 | 3_2:-57355433 | Msa0413130:CDS |
| AGACAAATCTATTATTGTCA+CGG | 0.614131 | 3_2:-57355323 | Msa0413130:intron |
| TGTACCATCTACGAAACTCC+CGG | 0.614554 | 3_2:+57354666 | None:intergenic |
| GATTAGGCAATTGTTTCCTG+AGG | 0.616657 | 3_2:+57355166 | None:intergenic |
| AAGGCATTCCTCAAAACTAG+AGG | 0.619679 | 3_2:+57354596 | None:intergenic |
| AGCTAATATGAGACATGGCA+AGG | 0.619874 | 3_2:-57352065 | Msa0413130:exon |
| ATATGATGTAACCACAATCA+GGG | 0.627367 | 3_2:-57353419 | Msa0413130:CDS |
| GCCCACTCCAGTCTGGACCA+CGG | 0.634064 | 3_2:+57355431 | None:intergenic |
| TTCAAAGCTAATATGAGACA+TGG | 0.641602 | 3_2:-57352070 | Msa0413130:exon |
| TGGAGTGGGCTCCACCAACA+TGG | 0.641715 | 3_2:-57355418 | Msa0413130:CDS |
| CCAGATAGTAAAACACCGAA+CGG | 0.643802 | 3_2:+57354409 | None:intergenic |
| TTGCTCGAGTACAAATGACC+AGG | 0.644299 | 3_2:+57354692 | None:intergenic |
| ATAATTGCCTCATTGAACCA+TGG | 0.655833 | 3_2:+57354638 | None:intergenic |
| TCACCAAGAAACATGCCGCA+AGG | 0.655836 | 3_2:-57353263 | Msa0413130:intron |
| CAAAACTAGAGGATCATAAG+GGG | 0.656036 | 3_2:+57354607 | None:intergenic |
| AATAAATCAACATATGCATG+GGG | 0.661879 | 3_2:-57353100 | Msa0413130:CDS |
| CAATCCTCCATGGTTCAATG+AGG | 0.663563 | 3_2:-57354645 | Msa0413130:CDS |
| ACCAGAAGCAGGATCAACAA+TGG | 0.667593 | 3_2:+57355366 | None:intergenic |
| CTCGAGTACAAATGACCAGG+TGG | 0.689124 | 3_2:+57354695 | None:intergenic |
| ATTGCCTCATTGAACCATGG+AGG | 0.695910 | 3_2:+57354641 | None:intergenic |
| TCTTTGATCATCACAATGTG+TGG | 0.696303 | 3_2:-57356737 | Msa0413130:exon |
| ACAAAAGCTGCTAAGCAATG+GGG | 0.697354 | 3_2:-57354334 | Msa0413130:CDS |
| GCAAGACTAACGGTTCCTGG+AGG | 0.731795 | 3_2:-57352287 | Msa0413130:CDS |
| GTTACTGCTAGATACCTGGC+CGG | 0.738427 | 3_2:-57354358 | Msa0413130:CDS |
| TGTCACAGATTGAAGCACCG+TGG | 0.798262 | 3_2:-57355448 | Msa0413130:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATAAAAAACTCT+AGG | + | chr3_2:57352170-57352189 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTGTATTTTTG+TGG | - | chr3_2:57352183-57352202 | Msa0413130:CDS | 10.0% |
| !!! | AAAATATTTTAGTTTTAAGA+GGG | - | chr3_2:57352337-57352356 | Msa0413130:intron | 10.0% |
| !! | AATACTAATTAATACATATA+TGG | - | chr3_2:57352390-57352409 | Msa0413130:intron | 10.0% |
| !! | ATATAATTATCCATTTAAAT+TGG | - | chr3_2:57352635-57352654 | Msa0413130:intron | 10.0% |
| !! | TATAATTATCCATTTAAATT+GGG | - | chr3_2:57352636-57352655 | Msa0413130:intron | 10.0% |
| !!! | TTATTGATTATTATTCTAAT+TGG | + | chr3_2:57353137-57353156 | None:intergenic | 10.0% |
| !!! | TAAATTTTATCATAAAATTC+AGG | - | chr3_2:57353452-57353471 | Msa0413130:CDS | 10.0% |
| !!! | CAAAATATTTTAGTTTTAAG+AGG | - | chr3_2:57352336-57352355 | Msa0413130:intron | 15.0% |
| !!! | TTTTTTCAATTGCAAAATAT+TGG | + | chr3_2:57352568-57352587 | None:intergenic | 15.0% |
| !!! | ATTCTCTTTAAAATATTTGA+TGG | + | chr3_2:57352597-57352616 | None:intergenic | 15.0% |
| !! | AATAAACAAAAATAAGACAT+GGG | - | chr3_2:57352934-57352953 | Msa0413130:intron | 15.0% |
| !!! | TTTTATTTTAATAAATCACG+TGG | - | chr3_2:57353052-57353071 | Msa0413130:CDS | 15.0% |
| !!! | TTTATTTTAATAAATCACGT+GGG | - | chr3_2:57353053-57353072 | Msa0413130:CDS | 15.0% |
| !! | TAATAATCAATAAGTAACTT+TGG | - | chr3_2:57353144-57353163 | Msa0413130:intron | 15.0% |
| !! | ACTATAGAATATTATTACAA+GGG | + | chr3_2:57353382-57353401 | None:intergenic | 15.0% |
| !! | AACTATAGAATATTATTACA+AGG | + | chr3_2:57353383-57353402 | None:intergenic | 15.0% |
| !!! | ATTAGCAATGTTTTAAATAA+AGG | + | chr3_2:57353609-57353628 | None:intergenic | 15.0% |
| !!! | ATTGCTTTAATCTTTATTTA+TGG | - | chr3_2:57354484-57354503 | Msa0413130:intron | 15.0% |
| !!! | CACATTTTTATAATATCATA+GGG | - | chr3_2:57355126-57355145 | Msa0413130:CDS | 15.0% |
| !!! | ACATTTTTATAATATCATAG+GGG | - | chr3_2:57355127-57355146 | Msa0413130:CDS | 15.0% |
| !! | TAATAAAATGTTACATCTTT+AGG | + | chr3_2:57355713-57355732 | None:intergenic | 15.0% |
| !! | TATGTAGTATAATAATATTC+TGG | + | chr3_2:57356648-57356667 | None:intergenic | 15.0% |
| !! | AAAGACAATAGTTTCTATAA+GGG | + | chr3_2:57351917-57351936 | None:intergenic | 20.0% |
| !!! | CTTTTATATAAATACCCTTT+AGG | - | chr3_2:57352073-57352092 | Msa0413130:exon | 20.0% |
| !! | AATATCAAAGTTAACCTAAA+GGG | + | chr3_2:57352090-57352109 | None:intergenic | 20.0% |
| !! | AAATATCAAAGTTAACCTAA+AGG | + | chr3_2:57352091-57352110 | None:intergenic | 20.0% |
| !! | ATATTAATCCTTGATATCAA+AGG | + | chr3_2:57352234-57352253 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAATTCACTTTTT+AGG | - | chr3_2:57352774-57352793 | Msa0413130:intron | 20.0% |
| !! | GAATAAACAAAAATAAGACA+TGG | - | chr3_2:57352933-57352952 | Msa0413130:intron | 20.0% |
| !! | ATAAACAAAAATAAGACATG+GGG | - | chr3_2:57352935-57352954 | Msa0413130:intron | 20.0% |
| !! | AAAATAAAAATTCCACATGT+AGG | + | chr3_2:57353041-57353060 | None:intergenic | 20.0% |
| !!! | TTATTCTAATTGGACTTTTT+TGG | + | chr3_2:57353127-57353146 | None:intergenic | 20.0% |
| !! | TGCTATATAGTATAATAAAG+TGG | - | chr3_2:57353419-57353438 | Msa0413130:CDS | 20.0% |
| !!! | ACCATTAATGTTATTGATTT+TGG | - | chr3_2:57353635-57353654 | Msa0413130:intron | 20.0% |
| !! | ACCAAAATCAATAACATTAA+TGG | + | chr3_2:57353639-57353658 | None:intergenic | 20.0% |
| !!! | GAATGAAAAATCAATTTTAG+TGG | - | chr3_2:57354413-57354432 | Msa0413130:CDS | 20.0% |
| !! | GGATTATTAAAAAAAATCGA+TGG | - | chr3_2:57354434-57354453 | Msa0413130:CDS | 20.0% |
| !! | TGGAAAAAAACATTCATTTA+AGG | - | chr3_2:57354454-57354473 | Msa0413130:intron | 20.0% |
| !!! | TTATTTATGGTATGTTGATT+AGG | - | chr3_2:57354497-57354516 | Msa0413130:intron | 20.0% |
| !!! | TATTTATGGTATGTTGATTA+GGG | - | chr3_2:57354498-57354517 | Msa0413130:intron | 20.0% |
| !!! | GCACATTTTTATAATATCAT+AGG | - | chr3_2:57355125-57355144 | Msa0413130:CDS | 20.0% |
| !!! | CATTTTTATAATATCATAGG+GGG | - | chr3_2:57355128-57355147 | Msa0413130:CDS | 20.0% |
| !! | AAATAAATCAACATATGCAT+GGG | - | chr3_2:57355568-57355587 | Msa0413130:intron | 20.0% |
| !! | CAACAAAAGTAAAATGAAAT+TGG | + | chr3_2:57356048-57356067 | None:intergenic | 20.0% |
| !!! | AATAATATTCTGGCTTTATT+AGG | + | chr3_2:57356638-57356657 | None:intergenic | 20.0% |
| !! | AAAATGCTATGTTATGTATA+AGG | - | chr3_2:57356721-57356740 | Msa0413130:CDS | 20.0% |
| !! | AACACTATCATATTGTAATT+TGG | - | chr3_2:57356817-57356836 | Msa0413130:five_prime_UTR | 20.0% |
| !! | TTATGTTAAATTTGAATGCA+AGG | - | chr3_2:57356863-57356882 | Msa0413130:five_prime_UTR | 20.0% |
| ! | TTGAAGAGACAAAGAAAAAA+AGG | + | chr3_2:57351887-57351906 | None:intergenic | 25.0% |
| ! | CAAAGACAATAGTTTCTATA+AGG | + | chr3_2:57351918-57351937 | None:intergenic | 25.0% |
| ! | ATATTAAGAATTGAGTGATG+AGG | - | chr3_2:57352289-57352308 | Msa0413130:CDS | 25.0% |
| ! | TACTAGAAAAATCACCAAAA+TGG | - | chr3_2:57352478-57352497 | Msa0413130:CDS | 25.0% |
| ! | TTCAATTGCAAAATATTGGA+TGG | + | chr3_2:57352564-57352583 | None:intergenic | 25.0% |
| !! | TAGTAACTAGTAGTTAGTTT+AGG | - | chr3_2:57352693-57352712 | Msa0413130:CDS | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | + | chr3_2:57352873-57352892 | None:intergenic | 25.0% |
| ! | AATTGAATGAACCTAAAAAG+TGG | - | chr3_2:57352849-57352868 | Msa0413130:intron | 25.0% |
| !!! | TAAGCAAAAATCCACTTTTT+AGG | + | chr3_2:57352863-57352882 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | - | chr3_2:57352873-57352892 | Msa0413130:CDS | 25.0% |
| ! | TGTTGTTATGATGCAATAAT+TGG | - | chr3_2:57352964-57352983 | Msa0413130:intron | 25.0% |
| ! | TTATGATGCAATAATTGGTT+CGG | - | chr3_2:57352969-57352988 | Msa0413130:intron | 25.0% |
| !!! | AAATTAATTTGTCCTACATG+TGG | - | chr3_2:57353026-57353045 | Msa0413130:CDS | 25.0% |
| ! | TGGACTTTATGTATATGAAT+GGG | + | chr3_2:57353091-57353110 | None:intergenic | 25.0% |
| ! | TTGGACTTTATGTATATGAA+TGG | + | chr3_2:57353092-57353111 | None:intergenic | 25.0% |
| !!! | TTTTTGGTAGTGATTCTAAT+TGG | + | chr3_2:57353111-57353130 | None:intergenic | 25.0% |
| ! | AGACAAATCTATTATTGTCA+CGG | - | chr3_2:57353346-57353365 | Msa0413130:CDS | 25.0% |
| ! | TATCATAAAATTCAGGTGAA+TGG | - | chr3_2:57353459-57353478 | Msa0413130:CDS | 25.0% |
| !! | TGAATAATTTGTGACAAGTT+TGG | - | chr3_2:57353867-57353886 | Msa0413130:intron | 25.0% |
| !!! | CAATTCTCACATTTTTAAGT+CGG | - | chr3_2:57354149-57354168 | Msa0413130:CDS | 25.0% |
| ! | TAGTAAACTGAAATTCATGA+TGG | + | chr3_2:57354575-57354594 | None:intergenic | 25.0% |
| ! | TGAATTTCAGTTTACTATTC+AGG | - | chr3_2:57354578-57354597 | Msa0413130:intron | 25.0% |
| !!! | TTTATTTTTGTGGTGTATGT+AGG | - | chr3_2:57355184-57355203 | Msa0413130:CDS | 25.0% |
| ! | CAAATAAATCAACATATGCA+TGG | - | chr3_2:57355567-57355586 | Msa0413130:intron | 25.0% |
| ! | AATAAATCAACATATGCATG+GGG | - | chr3_2:57355569-57355588 | Msa0413130:intron | 25.0% |
| !! | TATCATTACCATTTTGTACT+CGG | + | chr3_2:57355657-57355676 | None:intergenic | 25.0% |
| ! | TTTCAGATAAAACATGAAGA+AGG | - | chr3_2:57355751-57355770 | Msa0413130:intron | 25.0% |
| ! | TGAAATTGGAAAGAAAATGT+TGG | + | chr3_2:57356034-57356053 | None:intergenic | 25.0% |
| !!! | GTTCTTGAATTTTTTCGTAT+AGG | - | chr3_2:57356090-57356109 | Msa0413130:intron | 25.0% |
| ! | TCTATAGTAATATGCTTCTT+TGG | + | chr3_2:57356173-57356192 | None:intergenic | 25.0% |
| !! | ATTTTTATAACAATGTCGCT+TGG | + | chr3_2:57356254-57356273 | None:intergenic | 25.0% |
| ! | ATTTGATTAGGCCTTTATTA+AGG | + | chr3_2:57356336-57356355 | None:intergenic | 25.0% |
| ! | AGATTAGAAATTTCCATCTT+TGG | + | chr3_2:57356568-57356587 | None:intergenic | 25.0% |
| ! | AAGATGGAAATTTCTAATCT+TGG | - | chr3_2:57356568-57356587 | Msa0413130:intron | 25.0% |
| ! | TATAGTCAATAATTGCATAG+AGG | - | chr3_2:57356666-57356685 | Msa0413130:CDS | 25.0% |
| ! | TTTAAAAGAAAGACTAGATG+TGG | + | chr3_2:57356781-57356800 | None:intergenic | 25.0% |
| !! | GTCTTTCTTTTAAATTGATG+TGG | - | chr3_2:57356787-57356806 | Msa0413130:five_prime_UTR | 25.0% |
| ATTGGATAAAATGTGAAGAG+AGG | + | chr3_2:57351864-57351883 | None:intergenic | 30.0% | |
| GAGACAAAGAAAAAAAGGAT+TGG | + | chr3_2:57351882-57351901 | None:intergenic | 30.0% | |
| GGTAAATAAGTGTTTGATCA+TGG | + | chr3_2:57352149-57352168 | None:intergenic | 30.0% | |
| ! | AATAATAAGCAGCACCATTT+TGG | + | chr3_2:57352495-57352514 | None:intergenic | 30.0% |
| TCACTATGACATTTAATACG+AGG | + | chr3_2:57352523-57352542 | None:intergenic | 30.0% | |
| ACAACTGAAAGATAAGCATT+GGG | + | chr3_2:57352663-57352682 | None:intergenic | 30.0% | |
| TACAACTGAAAGATAAGCAT+TGG | + | chr3_2:57352664-57352683 | None:intergenic | 30.0% | |
| AAACATACTTGACTTTGACA+AGG | - | chr3_2:57352718-57352737 | Msa0413130:CDS | 30.0% | |
| TATTGCATCATAACAACATG+TGG | + | chr3_2:57352962-57352981 | None:intergenic | 30.0% | |
| !!! | TCTTGTTCGTTGATTTTGTT+GGG | + | chr3_2:57353002-57353021 | None:intergenic | 30.0% |
| ! | ATAACTATTTGGCTCATCAA+AGG | - | chr3_2:57353276-57353295 | Msa0413130:CDS | 30.0% |
| TGTTGTTAGTATGAAGAGTA+TGG | - | chr3_2:57353665-57353684 | Msa0413130:intron | 30.0% | |
| ! | AGAGTATGGAGAAAATTTTG+TGG | - | chr3_2:57353679-57353698 | Msa0413130:intron | 30.0% |
| ! | AGAAAATTTTGTGGACATGT+TGG | - | chr3_2:57353688-57353707 | Msa0413130:intron | 30.0% |
| ! | TATCTTTTCATTTGTTCTGC+TGG | - | chr3_2:57353715-57353734 | Msa0413130:intron | 30.0% |
| ! | TTGTTATTGTAGGTTCTGTT+TGG | - | chr3_2:57353897-57353916 | Msa0413130:intron | 30.0% |
| TGGATTGCATCAGAATTAAA+AGG | - | chr3_2:57353917-57353936 | Msa0413130:intron | 30.0% | |
| GGATTGCATCAGAATTAAAA+GGG | - | chr3_2:57353918-57353937 | Msa0413130:intron | 30.0% | |
| TCAAAACTAGAGGATCATAA+GGG | + | chr3_2:57354066-57354085 | None:intergenic | 30.0% | |
| !!! | ATTTTTAAGTCGGTTCTGTA+AGG | - | chr3_2:57354159-57354178 | Msa0413130:intron | 30.0% |
| TTAGACTCAGTATAGCTAAT+AGG | - | chr3_2:57354187-57354206 | Msa0413130:intron | 30.0% | |
| GGATTGATATGTTTGATTAC+AGG | - | chr3_2:57354208-57354227 | Msa0413130:intron | 30.0% | |
| AAATTACACTCATTCTGTGT+AGG | - | chr3_2:57354362-57354381 | Msa0413130:CDS | 30.0% | |
| AATTACACTCATTCTGTGTA+GGG | - | chr3_2:57354363-57354382 | Msa0413130:CDS | 30.0% | |
| CTCAAAATTGCAAAAAGTTG+CGG | - | chr3_2:57354763-57354782 | Msa0413130:CDS | 30.0% | |
| ATATGATGTAACCACAATCA+GGG | - | chr3_2:57355250-57355269 | Msa0413130:intron | 30.0% | |
| ! | AGGGTATTTGTATTTCCATA+AGG | - | chr3_2:57355364-57355383 | Msa0413130:CDS | 30.0% |
| ATGAAATCCTTGTCCAAAAA+TGG | + | chr3_2:57355611-57355630 | None:intergenic | 30.0% | |
| GGATTTCATAAAAGTTGCAA+TGG | - | chr3_2:57355622-57355641 | Msa0413130:intron | 30.0% | |
| ! | ATCATTACCATTTTGTACTC+GGG | + | chr3_2:57355656-57355675 | None:intergenic | 30.0% |
| TCGACATAAATTGTAGCAAA+TGG | + | chr3_2:57355859-57355878 | None:intergenic | 30.0% | |
| ! | TCATGCAGCACATTTTATAT+AGG | - | chr3_2:57355924-57355943 | Msa0413130:intron | 30.0% |
| TAATATGCTTCTTTGGTAAG+TGG | + | chr3_2:57356166-57356185 | None:intergenic | 30.0% | |
| ACTATAGAATGATCTTTGAG+AGG | - | chr3_2:57356185-57356204 | Msa0413130:intron | 30.0% | |
| TGATTGATTAAGTTACCTGA+GGG | + | chr3_2:57356216-57356235 | None:intergenic | 30.0% | |
| TTGATTGATTAAGTTACCTG+AGG | + | chr3_2:57356217-57356236 | None:intergenic | 30.0% | |
| TCCCAACATAACCTTAATAA+AGG | - | chr3_2:57356322-57356341 | Msa0413130:intron | 30.0% | |
| GCCTTTATTAAGGTTATGTT+GGG | + | chr3_2:57356326-57356345 | None:intergenic | 30.0% | |
| ATCTTTGGTATAATCTTCTC+TGG | + | chr3_2:57356553-57356572 | None:intergenic | 30.0% | |
| AGAGAAGATTATACCAAAGA+TGG | - | chr3_2:57356552-57356571 | Msa0413130:intron | 30.0% | |
| !! | TGTCTCATATTAGCTTTGAA+TGG | + | chr3_2:57356599-57356618 | None:intergenic | 30.0% |
| TTCAAAGCTAATATGAGACA+TGG | - | chr3_2:57356599-57356618 | Msa0413130:intron | 30.0% | |
| AGAAGAAGACACGAAAAACA+AGG | + | chr3_2:57351829-57351848 | None:intergenic | 35.0% | |
| TCTTTGATCATCACAATGTG+TGG | - | chr3_2:57351932-57351951 | Msa0413130:three_prime_UTR | 35.0% | |
| ! | TTTTGTGGTTTACAAGCTCA+TGG | - | chr3_2:57352198-57352217 | Msa0413130:CDS | 35.0% |
| TTTGTGGTTTACAAGCTCAT+GGG | - | chr3_2:57352199-57352218 | Msa0413130:CDS | 35.0% | |
| ! | CAACTGAAAGATAAGCATTG+GGG | + | chr3_2:57352662-57352681 | None:intergenic | 35.0% |
| !!! | CTCTTGTTCGTTGATTTTGT+TGG | + | chr3_2:57353003-57353022 | None:intergenic | 35.0% |
| AATAGTTATCACCATGTTGG+TGG | + | chr3_2:57353265-57353284 | None:intergenic | 35.0% | |
| CCAAATAGTTATCACCATGT+TGG | + | chr3_2:57353268-57353287 | None:intergenic | 35.0% | |
| CCAACATGGTGATAACTATT+TGG | - | chr3_2:57353265-57353284 | Msa0413130:CDS | 35.0% | |
| GATTTGTCTTCATTGAAGAG+AGG | + | chr3_2:57353335-57353354 | None:intergenic | 35.0% | |
| TGTGTACGGAATTTGTGATT+AGG | + | chr3_2:57353522-57353541 | None:intergenic | 35.0% | |
| ! | AATTTTGTGGACATGTTGGA+TGG | - | chr3_2:57353692-57353711 | Msa0413130:intron | 35.0% |
| ACAACAGTTTCATTGTTGCA+AGG | - | chr3_2:57353747-57353766 | Msa0413130:intron | 35.0% | |
| CAACAGTTTCATTGTTGCAA+GGG | - | chr3_2:57353748-57353767 | Msa0413130:intron | 35.0% | |
| !!! | TGGCACGTTTTTGTTATTGT+AGG | - | chr3_2:57353887-57353906 | Msa0413130:intron | 35.0% |
| !!! | CATTTTGAAGTTTTTCCACC+TGG | - | chr3_2:57353959-57353978 | Msa0413130:intron | 35.0% |
| ATAATTGCCTCATTGAACCA+TGG | + | chr3_2:57354034-57354053 | None:intergenic | 35.0% | |
| CAAAACTAGAGGATCATAAG+GGG | + | chr3_2:57354065-57354084 | None:intergenic | 35.0% | |
| CTCAAAACTAGAGGATCATA+AGG | + | chr3_2:57354067-57354086 | None:intergenic | 35.0% | |
| !!! | CTTATGATCCTCTAGTTTTG+AGG | - | chr3_2:57354065-57354084 | Msa0413130:intron | 35.0% |
| CTAAGCGCTTTATAAACTCT+TGG | + | chr3_2:57354128-57354147 | None:intergenic | 35.0% | |
| GATTACAGGCTGTGATAAAA+AGG | - | chr3_2:57354222-57354241 | Msa0413130:intron | 35.0% | |
| ! | TGTTTTACTATCTGGAGGTT+TGG | - | chr3_2:57354268-57354287 | Msa0413130:intron | 35.0% |
| ! | AGAGAAGTAGCAGACTTTTT+AGG | - | chr3_2:57354543-57354562 | Msa0413130:intron | 35.0% |
| CTCATAATTGCGAAAAGTTG+CGG | - | chr3_2:57354632-57354651 | Msa0413130:CDS | 35.0% | |
| CAAAAAGTTGCGGTCTAATA+GGG | - | chr3_2:57354773-57354792 | Msa0413130:intron | 35.0% | |
| ACGAAAAGTTGCTGTCAAAT+AGG | - | chr3_2:57354901-57354920 | Msa0413130:CDS | 35.0% | |
| CGAAAAGTTGCTGTCAAATA+GGG | - | chr3_2:57354902-57354921 | Msa0413130:CDS | 35.0% | |
| TTGATGTCACAGTCTGAATT+TGG | - | chr3_2:57354968-57354987 | Msa0413130:CDS | 35.0% | |
| TGATGTCACAGTCTGAATTT+GGG | - | chr3_2:57354969-57354988 | Msa0413130:CDS | 35.0% | |
| CGAAAAGTTGCAGTCAAATA+GGG | - | chr3_2:57355033-57355052 | Msa0413130:intron | 35.0% | |
| ! | TTTTTGTGGTGTATGTAGGA+TGG | - | chr3_2:57355188-57355207 | Msa0413130:CDS | 35.0% |
| CATATGATGTAACCACAATC+AGG | - | chr3_2:57355249-57355268 | Msa0413130:intron | 35.0% | |
| TTTCGAGACATCAGAAACAT+AGG | + | chr3_2:57355284-57355303 | None:intergenic | 35.0% | |
| TCTCGAAAGATCAAATCATC+AGG | - | chr3_2:57355296-57355315 | Msa0413130:intron | 35.0% | |
| TCAAATCATCAGGAGTCAAA+TGG | - | chr3_2:57355306-57355325 | Msa0413130:intron | 35.0% | |
| CAAATCATCAGGAGTCAAAT+GGG | - | chr3_2:57355307-57355326 | Msa0413130:intron | 35.0% | |
| ! | GAAGGATCTGATGAGATTTT+TGG | - | chr3_2:57355341-57355360 | Msa0413130:CDS | 35.0% |
| !! | GATCTGATGAGATTTTTGGA+GGG | - | chr3_2:57355345-57355364 | Msa0413130:CDS | 35.0% |
| TGGTGAAACTCTTCTTTGTT+TGG | + | chr3_2:57355392-57355411 | None:intergenic | 35.0% | |
| !! | AGAAGCTAGAGTACCATTTT+TGG | - | chr3_2:57355595-57355614 | Msa0413130:intron | 35.0% |
| !! | TAGAGTACCATTTTTGGACA+AGG | - | chr3_2:57355601-57355620 | Msa0413130:intron | 35.0% |
| AAGAAGGAAGAATCGAGAAA+TGG | - | chr3_2:57355767-57355786 | Msa0413130:intron | 35.0% | |
| GAATCGAGAAATGGATACTA+AGG | - | chr3_2:57355776-57355795 | Msa0413130:intron | 35.0% | |
| AGAAAATCCTTATCTGCCTA+AGG | - | chr3_2:57355816-57355835 | Msa0413130:intron | 35.0% | |
| ! | AAAGTAGAGTAGAGTACCTT+AGG | + | chr3_2:57355835-57355854 | None:intergenic | 35.0% |
| ! | GCACATTTTATATAGGCAGA+AGG | - | chr3_2:57355931-57355950 | Msa0413130:intron | 35.0% |
| ! | TGGTTGGATTGATGGTATTA+AGG | - | chr3_2:57355979-57355998 | Msa0413130:intron | 35.0% |
| ! | TGTTTACATGTTTTGCAGCA+TGG | + | chr3_2:57356006-57356025 | None:intergenic | 35.0% |
| GGCCTTTATTAAGGTTATGT+TGG | + | chr3_2:57356327-57356346 | None:intergenic | 35.0% | |
| CGAAACACAGAGATTTGATT+AGG | + | chr3_2:57356348-57356367 | None:intergenic | 35.0% | |
| ! | GTGTTTCGATTTGTAGAACT+CGG | - | chr3_2:57356360-57356379 | Msa0413130:intron | 35.0% |
| ! | GCCTGTTGTGTATTTTATCA+AGG | - | chr3_2:57356697-57356716 | Msa0413130:CDS | 35.0% |
| GCCTTGATAAAATACACAAC+AGG | + | chr3_2:57356701-57356720 | None:intergenic | 35.0% | |
| AAAACAAGGTGCAAAGAGTG+TGG | + | chr3_2:57351815-57351834 | None:intergenic | 40.0% | |
| !! | TGTGGTATACTTGCTGTACT+TGG | - | chr3_2:57351950-57351969 | Msa0413130:three_prime_UTR | 40.0% |
| TGATGACTCACAAGCTAAGA+GGG | - | chr3_2:57351979-57351998 | Msa0413130:three_prime_UTR | 40.0% | |
| GTGGTTGTCCTTTGATATCA+AGG | - | chr3_2:57352223-57352242 | Msa0413130:CDS | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | + | chr3_2:57352877-57352896 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | + | chr3_2:57352876-57352895 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | - | chr3_2:57352876-57352895 | Msa0413130:CDS | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | - | chr3_2:57352877-57352896 | Msa0413130:CDS | 40.0% | |
| TCTACAATCATGAAGACCTC+AGG | - | chr3_2:57353487-57353506 | Msa0413130:intron | 40.0% | |
| GATTAGGCAATTGTTTCCTG+AGG | + | chr3_2:57353506-57353525 | None:intergenic | 40.0% | |
| CATCACAGTCACATTGTGTA+CGG | + | chr3_2:57353536-57353555 | None:intergenic | 40.0% | |
| ATTGTTGCAAGGGATGCTAT+AGG | - | chr3_2:57353758-57353777 | Msa0413130:intron | 40.0% | |
| TCACTTCCTTGTACATTGGT+TGG | - | chr3_2:57353783-57353802 | Msa0413130:intron | 40.0% | |
| ! | CACTTCCTTGTACATTGGTT+GGG | - | chr3_2:57353784-57353803 | Msa0413130:intron | 40.0% |
| ! | ACTTCCTTGTACATTGGTTG+GGG | - | chr3_2:57353785-57353804 | Msa0413130:intron | 40.0% |
| ATTTGTACTCGAGCAAAGAC+CGG | - | chr3_2:57353984-57354003 | Msa0413130:intron | 40.0% | |
| ! | AAGGCATTCCTCAAAACTAG+AGG | + | chr3_2:57354076-57354095 | None:intergenic | 40.0% |
| ! | TTTGAGGAATGCCTTTGAGA+AGG | - | chr3_2:57354081-57354100 | Msa0413130:intron | 40.0% |
| TTTGAGTCTTGCCTTCTCAA+AGG | + | chr3_2:57354095-57354114 | None:intergenic | 40.0% | |
| CCAGATAGTAAAACACCGAA+CGG | + | chr3_2:57354263-57354282 | None:intergenic | 40.0% | |
| !!! | TTCGGTGTTTTACTATCTGG+AGG | - | chr3_2:57354263-57354282 | Msa0413130:intron | 40.0% |
| TGGAGGTTTGGATTCTTCAT+TGG | - | chr3_2:57354280-57354299 | Msa0413130:intron | 40.0% | |
| CACAAAAGCTGCTAAGCAAT+GGG | - | chr3_2:57354334-57354353 | Msa0413130:CDS | 40.0% | |
| ACAAAAGCTGCTAAGCAATG+GGG | - | chr3_2:57354335-57354354 | Msa0413130:CDS | 40.0% | |
| CGAAAAGTTGCGGTCAAATA+GGG | - | chr3_2:57354642-57354661 | Msa0413130:CDS | 40.0% | |
| CACAATAAAGACTGCGACAT+TGG | + | chr3_2:57354711-57354730 | None:intergenic | 40.0% | |
| CAATGTCGCAGTCTTTATTG+TGG | - | chr3_2:57354709-57354728 | Msa0413130:CDS | 40.0% | |
| GCAAAAAGTTGCGGTCTAAT+AGG | - | chr3_2:57354772-57354791 | Msa0413130:intron | 40.0% | |
| CATGCAGACATCAAAAACCT+TGG | - | chr3_2:57354820-57354839 | Msa0413130:intron | 40.0% | |
| ATAAATTCTGAGCGACACCA+AGG | + | chr3_2:57354840-57354859 | None:intergenic | 40.0% | |
| GCGAAAAGTTGCAGTCAAAT+AGG | - | chr3_2:57355032-57355051 | Msa0413130:intron | 40.0% | |
| TGAAGTCACAGTCTAGATTG+CGG | - | chr3_2:57355100-57355119 | Msa0413130:intron | 40.0% | |
| ! | AAATGGGTGATTTCTGGAGA+AGG | - | chr3_2:57355323-57355342 | Msa0413130:intron | 40.0% |
| !! | GGATCTGATGAGATTTTTGG+AGG | - | chr3_2:57355344-57355363 | Msa0413130:CDS | 40.0% |
| !! | CTTCTTTGTTTGGTGCCTTA+TGG | + | chr3_2:57355382-57355401 | None:intergenic | 40.0% |
| GATGTAGGTCTATTACCTTG+CGG | + | chr3_2:57355424-57355443 | None:intergenic | 40.0% | |
| AAACATGAGCGATGTGATGT+AGG | + | chr3_2:57355439-57355458 | None:intergenic | 40.0% | |
| ATCACATCGCTCATGTTTGA+AGG | - | chr3_2:57355441-57355460 | Msa0413130:CDS | 40.0% | |
| TCACATCGCTCATGTTTGAA+GGG | - | chr3_2:57355442-57355461 | Msa0413130:CDS | 40.0% | |
| TGCAGATCAAAGCTCTTCAT+AGG | - | chr3_2:57355528-57355547 | Msa0413130:intron | 40.0% | |
| CATTGATCCCGAGTACAAAA+TGG | - | chr3_2:57355646-57355665 | Msa0413130:intron | 40.0% | |
| CGAGAAATGGATACTAAGGA+AGG | - | chr3_2:57355780-57355799 | Msa0413130:intron | 40.0% | |
| ! | TAGAGTACCTTAGGCAGATA+AGG | + | chr3_2:57355826-57355845 | None:intergenic | 40.0% |
| !! | TTGGTAAGTGGAGTGTTGAA+AGG | + | chr3_2:57356154-57356173 | None:intergenic | 40.0% |
| CACAGAGAAAGCTATTGAGT+GGG | - | chr3_2:57356423-57356442 | Msa0413130:intron | 40.0% | |
| !! | TTTTGGCAACTGAGTTGACT+TGG | + | chr3_2:57356522-57356541 | None:intergenic | 40.0% |
| AGCTAATATGAGACATGGCA+AGG | - | chr3_2:57356604-57356623 | Msa0413130:intron | 40.0% | |
| CTGATGACTCACAAGCTAAG+AGG | - | chr3_2:57351978-57351997 | Msa0413130:three_prime_UTR | 45.0% | |
| AGAATTGAGTGATGAGGACG+AGG | - | chr3_2:57352295-57352314 | Msa0413130:CDS | 45.0% | |
| GAGGACGAGGAATGAAAGAA+TGG | - | chr3_2:57352308-57352327 | Msa0413130:intron | 45.0% | |
| GCATTGGGGCCCAATTTAAA+TGG | + | chr3_2:57352648-57352667 | None:intergenic | 45.0% | |
| GTAATGTGTCATACACCCTC+CGG | + | chr3_2:57352895-57352914 | None:intergenic | 45.0% | |
| ACCAGAAGCAGGATCAACAA+TGG | + | chr3_2:57353306-57353325 | None:intergenic | 45.0% | |
| CTGTGATGTTATTGCACACC+TGG | - | chr3_2:57353548-57353567 | Msa0413130:intron | 45.0% | |
| !! | GGTGTCACTTCCTTGTACAT+TGG | - | chr3_2:57353779-57353798 | Msa0413130:intron | 45.0% |
| TAGTCCCCAACCAATGTACA+AGG | + | chr3_2:57353792-57353811 | None:intergenic | 45.0% | |
| ! | TACATTGGTTGGGGACTAGA+TGG | - | chr3_2:57353794-57353813 | Msa0413130:intron | 45.0% |
| TTGCTCGAGTACAAATGACC+AGG | + | chr3_2:57353980-57353999 | None:intergenic | 45.0% | |
| TTTGTACTCGAGCAAAGACC+GGG | - | chr3_2:57353985-57354004 | Msa0413130:intron | 45.0% | |
| TGTACCATCTACGAAACTCC+CGG | + | chr3_2:57354006-57354025 | None:intergenic | 45.0% | |
| GTAGATGGTACAATCCTCCA+TGG | - | chr3_2:57354014-57354033 | Msa0413130:intron | 45.0% | |
| CAATCCTCCATGGTTCAATG+AGG | - | chr3_2:57354024-57354043 | Msa0413130:intron | 45.0% | |
| ATTGCCTCATTGAACCATGG+AGG | + | chr3_2:57354031-57354050 | None:intergenic | 45.0% | |
| AGAGGATCATAAGGGGTTGT+TGG | + | chr3_2:57354058-57354077 | None:intergenic | 45.0% | |
| ! | TTGATGACTGATGTGCCGTT+CGG | - | chr3_2:57354245-57354264 | Msa0413130:intron | 45.0% |
| !!! | CCGTTCGGTGTTTTACTATC+TGG | - | chr3_2:57354260-57354279 | Msa0413130:intron | 45.0% |
| AGCAGTTACTGCTAGATACC+TGG | - | chr3_2:57354307-57354326 | Msa0413130:CDS | 45.0% | |
| ! | TTGCTTAGCAGCTTTTGTGC+CGG | + | chr3_2:57354333-57354352 | None:intergenic | 45.0% |
| GCACAAAAGCTGCTAAGCAA+TGG | - | chr3_2:57354333-57354352 | Msa0413130:CDS | 45.0% | |
| CTCATTCTGTGTAGGGCTTA+AGG | - | chr3_2:57354370-57354389 | Msa0413130:CDS | 45.0% | |
| CTACTTCTCTTCCAGCCTTA+AGG | + | chr3_2:57354533-57354552 | None:intergenic | 45.0% | |
| GCGAAAAGTTGCGGTCAAAT+AGG | - | chr3_2:57354641-57354660 | Msa0413130:CDS | 45.0% | |
| GGATGGCATAGATGCAATTG+AGG | - | chr3_2:57355205-57355224 | Msa0413130:intron | 45.0% | |
| GGAGTCAAATGGGTGATTTC+TGG | - | chr3_2:57355317-57355336 | Msa0413130:intron | 45.0% | |
| TTACCTTGCGGCATGTTTCT+TGG | + | chr3_2:57355412-57355431 | None:intergenic | 45.0% | |
| CAGAAGGAACAGTTCAGTGA+TGG | - | chr3_2:57355947-57355966 | Msa0413130:intron | 45.0% | |
| ! | GAACAGTTCAGTGATGGAGT+TGG | - | chr3_2:57355953-57355972 | Msa0413130:intron | 45.0% |
| ! | TTCAGTGATGGAGTTGGCTA+TGG | - | chr3_2:57355959-57355978 | Msa0413130:intron | 45.0% |
| GTTGGCTATGGTTGGATTGA+TGG | - | chr3_2:57355971-57355990 | Msa0413130:intron | 45.0% | |
| GTAGAACTCGGCAAGACTAA+CGG | - | chr3_2:57356372-57356391 | Msa0413130:intron | 45.0% | |
| GCACAGAGAAAGCTATTGAG+TGG | - | chr3_2:57356422-57356441 | Msa0413130:intron | 45.0% | |
| CTATTGAGTGGGATGCTTCT+TGG | - | chr3_2:57356434-57356453 | Msa0413130:intron | 45.0% | |
| TCAAGCAACCTTGATCCATC+TGG | - | chr3_2:57356457-57356476 | Msa0413130:intron | 45.0% | |
| !!! | CTTCTCTGGCTCTACAGTTT+TGG | + | chr3_2:57356539-57356558 | None:intergenic | 45.0% |
| !!! | TTAATTTTATTTTATTTTTG+TGG | - | chr3_2:57355174-57355193 | Msa0413130:CDS | 5.0% |
| ATTGCCTGCGAGAAAGCTCA+AGG | + | chr3_2:57352012-57352031 | None:intergenic | 50.0% | |
| GGTTTACAAGCTCATGGGAG+TGG | - | chr3_2:57352204-57352223 | Msa0413130:CDS | 50.0% | |
| GAGTACACAACTACACCCTC+CGG | - | chr3_2:57352742-57352761 | Msa0413130:intron | 50.0% | |
| !! | TGTCACAGATTGAAGCACCG+TGG | - | chr3_2:57353221-57353240 | Msa0413130:intron | 50.0% |
| GCCATTGTTGATCCTGCTTC+TGG | - | chr3_2:57353302-57353321 | Msa0413130:CDS | 50.0% | |
| ! | AGAGGTTGATCACCAGAAGC+AGG | + | chr3_2:57353317-57353336 | None:intergenic | 50.0% |
| CACACCTGGTTAGTATGTCG+CGG | - | chr3_2:57353562-57353581 | Msa0413130:intron | 50.0% | |
| TAGACCGCGACATACTAACC+AGG | + | chr3_2:57353569-57353588 | None:intergenic | 50.0% | |
| GTATGTCGCGGTCTAGATTG+CGG | - | chr3_2:57353574-57353593 | Msa0413130:intron | 50.0% | |
| CTCGAGTACAAATGACCAGG+TGG | + | chr3_2:57353977-57353996 | None:intergenic | 50.0% | |
| AAGACCGGGAGTTTCGTAGA+TGG | - | chr3_2:57353999-57354018 | Msa0413130:intron | 50.0% | |
| GTTACTGCTAGATACCTGGC+CGG | - | chr3_2:57354311-57354330 | Msa0413130:CDS | 50.0% | |
| TTAGGGTGCACCTGACCTTA+AGG | - | chr3_2:57354515-57354534 | Msa0413130:intron | 50.0% | |
| TCTCTTCCAGCCTTAAGGTC+AGG | + | chr3_2:57354528-57354547 | None:intergenic | 50.0% | |
| TCACCAAGAAACATGCCGCA+AGG | - | chr3_2:57355406-57355425 | Msa0413130:CDS | 50.0% | |
| ! | GTGATGGAGTTGGCTATGGT+TGG | - | chr3_2:57355963-57355982 | Msa0413130:intron | 50.0% |
| ! | CTTTGAGAGGTCTTTCCCTC+AGG | - | chr3_2:57356198-57356217 | Msa0413130:intron | 50.0% |
| CTGCTCTTCCAGATGGATCA+AGG | + | chr3_2:57356468-57356487 | None:intergenic | 50.0% | |
| CCAAATGCTGCTCTTCCAGA+TGG | + | chr3_2:57356475-57356494 | None:intergenic | 50.0% | |
| CCATCTGGAAGAGCAGCATT+TGG | - | chr3_2:57356472-57356491 | Msa0413130:intron | 50.0% | |
| GCATCCTTGAGCTTTCTCGC+AGG | - | chr3_2:57352005-57352024 | Msa0413130:three_prime_UTR | 55.0% | |
| !! | AGGTGTTGCTGCCCTGATTG+TGG | + | chr3_2:57355264-57355283 | None:intergenic | 55.0% |
| TCGGCAAGACTAACGGTTCC+TGG | - | chr3_2:57356379-57356398 | Msa0413130:intron | 55.0% | |
| GCAAGACTAACGGTTCCTGG+AGG | - | chr3_2:57356382-57356401 | Msa0413130:intron | 55.0% | |
| CATGCAACACTAGCTCCTCC+AGG | + | chr3_2:57356400-57356419 | None:intergenic | 55.0% | |
| !! | TGAAGCACCGTGGTCCAGAC+TGG | - | chr3_2:57353231-57353250 | Msa0413130:intron | 60.0% |
| ACCGTGGTCCAGACTGGAGT+GGG | - | chr3_2:57353237-57353256 | Msa0413130:intron | 60.0% | |
| ! | TGGAGTGGGCTCCACCAACA+TGG | - | chr3_2:57353251-57353270 | Msa0413130:intron | 60.0% |
| !! | TAGCAGCTTTTGTGCCGGCC+AGG | + | chr3_2:57354328-57354347 | None:intergenic | 60.0% |
| GGTGCACCTGACCTTAAGGC+TGG | - | chr3_2:57354519-57354538 | Msa0413130:intron | 60.0% | |
| CACCGTGGTCCAGACTGGAG+TGG | - | chr3_2:57353236-57353255 | Msa0413130:intron | 65.0% | |
| GCCCACTCCAGTCTGGACCA+CGG | + | chr3_2:57353241-57353260 | None:intergenic | 65.0% | |
| TGGTGGAGCCCACTCCAGTC+TGG | + | chr3_2:57353248-57353267 | None:intergenic | 65.0% | |
| CGGTCTAGATTGCGGTCGCG+CGG | - | chr3_2:57353582-57353601 | Msa0413130:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 57351802 | 57356889 | 57351802 | ID=Msa0413130;Name=Msa0413130 |
| chr3_2 | mRNA | 57351802 | 57356889 | 57351802 | ID=Msa0413130-mRNA-1;Parent=Msa0413130;Name=Msa0413130-mRNA-1;_AED=0.08;_eAED=0.08;_QI=145|1|1|1|1|1|13|280|586 |
| chr3_2 | exon | 57351802 | 57352315 | 57351802 | ID=Msa0413130-mRNA-1:exon:11723;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57352472 | 57352579 | 57352472 | ID=Msa0413130-mRNA-1:exon:11722;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57352673 | 57352759 | 57352673 | ID=Msa0413130-mRNA-1:exon:11721;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57352854 | 57352934 | 57352854 | ID=Msa0413130-mRNA-1:exon:11720;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57353024 | 57353158 | 57353024 | ID=Msa0413130-mRNA-1:exon:11719;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57353264 | 57353485 | 57353264 | ID=Msa0413130-mRNA-1:exon:11718;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57354092 | 57354172 | 57354092 | ID=Msa0413130-mRNA-1:exon:11717;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57354300 | 57354461 | 57354300 | ID=Msa0413130-mRNA-1:exon:11716;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57354589 | 57354782 | 57354589 | ID=Msa0413130-mRNA-1:exon:11715;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57354876 | 57355017 | 57354876 | ID=Msa0413130-mRNA-1:exon:11714;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57355122 | 57355217 | 57355122 | ID=Msa0413130-mRNA-1:exon:11713;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57355324 | 57355462 | 57355324 | ID=Msa0413130-mRNA-1:exon:11712;Parent=Msa0413130-mRNA-1 |
| chr3_2 | exon | 57356665 | 57356889 | 57356665 | ID=Msa0413130-mRNA-1:exon:11711;Parent=Msa0413130-mRNA-1 |
| chr3_2 | five_prime_UTR | 57356745 | 57356889 | 57356745 | ID=Msa0413130-mRNA-1:five_prime_utr;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57356665 | 57356744 | 57356665 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57355324 | 57355462 | 57355324 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57355122 | 57355217 | 57355122 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57354876 | 57355017 | 57354876 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57354589 | 57354782 | 57354589 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57354300 | 57354461 | 57354300 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57354092 | 57354172 | 57354092 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57353264 | 57353485 | 57353264 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57353024 | 57353158 | 57353024 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57352854 | 57352934 | 57352854 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57352673 | 57352759 | 57352673 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57352472 | 57352579 | 57352472 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | CDS | 57352082 | 57352315 | 57352082 | ID=Msa0413130-mRNA-1:cds;Parent=Msa0413130-mRNA-1 |
| chr3_2 | three_prime_UTR | 57351802 | 57352081 | 57351802 | ID=Msa0413130-mRNA-1:three_prime_utr;Parent=Msa0413130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
