Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171510 | XP_013460286.1 | 99.829 | 586 | 1 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171510 | sp|P19251|ASNS1_PEA | 95.051 | 586 | 29 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa1171510 | -0.809360 | 1.966593e-50 | -8.615850e-47 |
| Msa0011920 | Msa1171510 | -0.829531 | 4.887480e-55 | -8.615850e-47 |
| Msa0030050 | Msa1171510 | 0.805812 | 1.113958e-49 | -8.615850e-47 |
| Msa0036560 | Msa1171510 | -0.811512 | 6.748111e-51 | -8.615850e-47 |
| Msa0037180 | Msa1171510 | 0.816814 | 4.553916e-52 | -8.615850e-47 |
| Msa0037280 | Msa1171510 | 0.814476 | 1.511222e-51 | -8.615850e-47 |
| Msa0037650 | Msa1171510 | -0.830928 | 2.228033e-55 | -8.615850e-47 |
| Msa0037720 | Msa1171510 | 0.854293 | 1.355182e-61 | -8.615850e-47 |
| Msa0076640 | Msa1171510 | 0.807445 | 5.037954e-50 | -8.615850e-47 |
| Msa0081700 | Msa1171510 | -0.819951 | 8.869427e-53 | -8.615850e-47 |
| Msa0083240 | Msa1171510 | 0.838643 | 2.545215e-57 | -8.615850e-47 |
| Msa0087550 | Msa1171510 | 0.803177 | 3.948441e-49 | -8.615850e-47 |
| Msa0092220 | Msa1171510 | 0.825761 | 3.930088e-54 | -8.615850e-47 |
| Msa0093740 | Msa1171510 | 0.983862 | 6.442391e-159 | -8.615850e-47 |
| Msa0099350 | Msa1171510 | -0.806123 | 9.583737e-50 | -8.615850e-47 |
| Msa0099430 | Msa1171510 | -0.807792 | 4.252224e-50 | -8.615850e-47 |
| Msa0614290 | Msa1171510 | 0.806187 | 9.291379e-50 | -8.615850e-47 |
| Msa0617470 | Msa1171510 | -0.814898 | 1.218716e-51 | -8.615850e-47 |
| Msa0621670 | Msa1171510 | -0.814697 | 1.350305e-51 | -8.615850e-47 |
| Msa0622590 | Msa1171510 | 0.801313 | 9.548818e-49 | -8.615850e-47 |
| Msa0638820 | Msa1171510 | 0.807191 | 5.703260e-50 | -8.615850e-47 |
| Msa0639530 | Msa1171510 | -0.809606 | 1.741179e-50 | -8.615850e-47 |
| Msa0672980 | Msa1171510 | 0.801257 | 9.804055e-49 | -8.615850e-47 |
| Msa0697510 | Msa1171510 | 0.800768 | 1.234525e-48 | -8.615850e-47 |
| Msa0697520 | Msa1171510 | 0.805866 | 1.085235e-49 | -8.615850e-47 |
| Msa0700250 | Msa1171510 | -0.811727 | 6.058236e-51 | -8.615850e-47 |
| Msa0826380 | Msa1171510 | 0.808500 | 3.003583e-50 | -8.615850e-47 |
| Msa0826450 | Msa1171510 | 0.808522 | 2.971217e-50 | -8.615850e-47 |
| Msa0828350 | Msa1171510 | 0.801355 | 9.364599e-49 | -8.615850e-47 |
| Msa0127910 | Msa1171510 | -0.812224 | 4.721331e-51 | -8.615850e-47 |
| Msa0129640 | Msa1171510 | 0.803944 | 2.736741e-49 | -8.615850e-47 |
| Msa0134270 | Msa1171510 | 0.802343 | 5.869951e-49 | -8.615850e-47 |
| Msa0139280 | Msa1171510 | -0.805678 | 1.188904e-49 | -8.615850e-47 |
| Msa0148000 | Msa1171510 | -0.810578 | 1.075090e-50 | -8.615850e-47 |
| Msa0150330 | Msa1171510 | 0.801911 | 7.202680e-49 | -8.615850e-47 |
| Msa0159240 | Msa1171510 | -0.801373 | 9.285944e-49 | -8.615850e-47 |
| Msa0174060 | Msa1171510 | -0.821528 | 3.849664e-53 | -8.615850e-47 |
| Msa0177320 | Msa1171510 | 0.800721 | 1.261712e-48 | -8.615850e-47 |
| Msa0223590 | Msa1171510 | 0.814974 | 1.172026e-51 | -8.615850e-47 |
| Msa0224210 | Msa1171510 | 0.806793 | 6.922346e-50 | -8.615850e-47 |
| Msa0225070 | Msa1171510 | -0.803731 | 3.031020e-49 | -8.615850e-47 |
| Msa0236690 | Msa1171510 | -0.805106 | 1.566815e-49 | -8.615850e-47 |
| Msa0381470 | Msa1171510 | 0.842471 | 2.533699e-58 | -8.615850e-47 |
| Msa0386890 | Msa1171510 | 0.811171 | 7.999285e-51 | -8.615850e-47 |
| Msa0389570 | Msa1171510 | -0.805948 | 1.043213e-49 | -8.615850e-47 |
| Msa0390590 | Msa1171510 | -0.812138 | 4.930481e-51 | -8.615850e-47 |
| Msa0390790 | Msa1171510 | 0.802982 | 4.331396e-49 | -8.615850e-47 |
| Msa0413130 | Msa1171510 | 0.998240 | 1.212251e-259 | -8.615850e-47 |
| Msa0458220 | Msa1171510 | 0.940861 | 1.128211e-100 | -8.615850e-47 |
| Msa0470920 | Msa1171510 | 0.806059 | 9.886704e-50 | -8.615850e-47 |
| Msa0264890 | Msa1171510 | 0.807742 | 4.355717e-50 | -8.615850e-47 |
| Msa0285420 | Msa1171510 | 0.823703 | 1.201041e-53 | -8.615850e-47 |
| Msa0304350 | Msa1171510 | -0.802738 | 4.865923e-49 | -8.615850e-47 |
| Msa0305910 | Msa1171510 | -0.800772 | 1.231961e-48 | -8.615850e-47 |
| Msa0324220 | Msa1171510 | 0.824220 | 9.084630e-54 | -8.615850e-47 |
| Msa0340270 | Msa1171510 | 0.819490 | 1.130287e-52 | -8.615850e-47 |
| Msa0340830 | Msa1171510 | -0.801456 | 8.928350e-49 | -8.615850e-47 |
| Msa1157200 | Msa1171510 | 0.825725 | 4.008307e-54 | -8.615850e-47 |
| Msa1159300 | Msa1171510 | -0.805652 | 1.203838e-49 | -8.615850e-47 |
| Msa1171510 | Msa1202470 | 0.820741 | 5.843859e-53 | -8.615850e-47 |
| Msa1171510 | Msa1202710 | -0.801037 | 1.087715e-48 | -8.615850e-47 |
| Msa1171510 | Msa1208530 | 0.818080 | 2.362546e-52 | -8.615850e-47 |
| Msa1171510 | Msa1254910 | 0.803995 | 2.670733e-49 | -8.615850e-47 |
| Msa1171510 | Msa1276400 | 0.827489 | 1.521295e-54 | -8.615850e-47 |
| Msa1171510 | Msa1299220 | 0.808271 | 3.361945e-50 | -8.615850e-47 |
| Msa1171510 | Msa1326180 | 0.806536 | 7.844967e-50 | -8.615850e-47 |
| Msa1171510 | Msa1344930 | 0.802894 | 4.517111e-49 | -8.615850e-47 |
| Msa1171510 | Msa1348860 | -0.801353 | 9.370193e-49 | -8.615850e-47 |
| Msa1171510 | Msa1361040 | 0.812807 | 3.521276e-51 | -8.615850e-47 |
| Msa1171510 | Msa1368400 | 0.810661 | 1.031745e-50 | -8.615850e-47 |
| Msa1171510 | Msa1369830 | 0.807746 | 4.347645e-50 | -8.615850e-47 |
| Msa1171510 | Msa1377980 | -0.803340 | 3.653382e-49 | -8.615850e-47 |
| Msa1171510 | Msa1384410 | -0.817820 | 2.704898e-52 | -8.615850e-47 |
| Msa1171510 | Msa1398450 | -0.817784 | 2.754943e-52 | -8.615850e-47 |
| Msa1171510 | Msa1401550 | 0.809793 | 1.587695e-50 | -8.615850e-47 |
| Msa1171510 | Msa1408280 | -0.800792 | 1.220572e-48 | -8.615850e-47 |
| Msa1171510 | Msa1411370 | 0.800648 | 1.306016e-48 | -8.615850e-47 |
| Msa1171510 | Msa1427860 | 0.800977 | 1.118970e-48 | -8.615850e-47 |
| Msa1171510 | Msa1439860 | 0.803970 | 2.703026e-49 | -8.615850e-47 |
| Msa0504700 | Msa1171510 | 0.925435 | 1.841773e-90 | -8.615850e-47 |
| Msa0519910 | Msa1171510 | 0.838776 | 2.352566e-57 | -8.615850e-47 |
| Msa0524370 | Msa1171510 | 0.806665 | 7.365998e-50 | -8.615850e-47 |
| Msa0538050 | Msa1171510 | -0.826560 | 2.536752e-54 | -8.615850e-47 |
| Msa0560280 | Msa1171510 | 0.803187 | 3.929704e-49 | -8.615850e-47 |
| Msa0563230 | Msa1171510 | -0.803675 | 3.113321e-49 | -8.615850e-47 |
| Msa0563440 | Msa1171510 | 0.801405 | 9.143609e-49 | -8.615850e-47 |
| Msa0566930 | Msa1171510 | 0.815974 | 7.022221e-52 | -8.615850e-47 |
| Msa0593600 | Msa1171510 | 0.809709 | 1.654817e-50 | -8.615850e-47 |
| Msa0595530 | Msa1171510 | 0.803308 | 3.708663e-49 | -8.615850e-47 |
| Msa0898090 | Msa1171510 | -0.811876 | 5.622718e-51 | -8.615850e-47 |
| Msa0913520 | Msa1171510 | 0.810132 | 1.342086e-50 | -8.615850e-47 |
| Msa0924690 | Msa1171510 | -0.837628 | 4.647372e-57 | -8.615850e-47 |
| Msa0931550 | Msa1171510 | -0.827847 | 1.247773e-54 | -8.615850e-47 |
| Msa0963800 | Msa1171510 | -0.837779 | 4.249452e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171510 | MtrunA17_Chr3g0105311 | 99.829 | 586 | 1 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1221 |
| Msa1171510 | MtrunA17_Chr5g0430381 | 86.007 | 586 | 80 | 2 | 1 | 586 | 1 | 584 | 0.0 | 1056 |
| Msa1171510 | MtrunA17_Chr3g0123991 | 75.714 | 560 | 135 | 1 | 1 | 560 | 1 | 559 | 0.0 | 915 |
| Msa1171510 | MtrunA17_Chr5g0429171 | 72.727 | 77 | 20 | 1 | 510 | 586 | 30 | 105 | 6.66e-28 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171510 | AT3G47340.1 | 81.942 | 587 | 102 | 3 | 1 | 586 | 1 | 584 | 0.0 | 1021 |
| Msa1171510 | AT5G10240.1 | 78.919 | 555 | 116 | 1 | 1 | 555 | 1 | 554 | 0.0 | 945 |
| Msa1171510 | AT5G65010.1 | 78.403 | 551 | 118 | 1 | 1 | 551 | 1 | 550 | 0.0 | 936 |
| Msa1171510 | AT5G10240.2 | 78.378 | 555 | 118 | 2 | 1 | 555 | 1 | 553 | 0.0 | 934 |
| Msa1171510 | AT5G65010.2 | 78.442 | 552 | 117 | 2 | 1 | 551 | 1 | 551 | 0.0 | 933 |
| Msa1171510 | AT3G47340.2 | 84.479 | 509 | 78 | 1 | 1 | 509 | 1 | 508 | 0.0 | 925 |
| Msa1171510 | AT3G47340.3 | 84.450 | 418 | 64 | 1 | 1 | 418 | 1 | 417 | 0.0 | 766 |
| Msa1171510 | AT3G47340.4 | 83.828 | 303 | 48 | 1 | 116 | 418 | 1 | 302 | 0.0 | 550 |
Find 145 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACACTATCATATTGTAATT+TGG | 0.171106 | 8_1:-1140062 | Msa1171510:three_prime_UTR |
| CTTCTTTGTTTGGTGCCTTA+TGG | 0.206839 | 8_1:+1141500 | None:intergenic |
| TGAATTTCAGTTTACTATTC+AGG | 0.209606 | 8_1:-1142301 | Msa1171510:intron |
| AATAATATTCTGGCTTTATT+AGG | 0.218404 | 8_1:+1140244 | None:intergenic |
| TGGATTGCATCAGAATTAAA+AGG | 0.220309 | 8_1:-1142962 | Msa1171510:CDS |
| GGAGTCAAATGGGTGATTTC+TGG | 0.221522 | 8_1:-1141562 | Msa1171510:CDS |
| CAAAGACAATAGTTTCTATA+AGG | 0.244961 | 8_1:+1144965 | None:intergenic |
| TCTATAGTAATATGCTTCTT+TGG | 0.249070 | 8_1:+1140709 | None:intergenic |
| AGATTAGAAATTTCCATCTT+TGG | 0.261394 | 8_1:+1140314 | None:intergenic |
| CTTCTCTGGCTCTACAGTTT+TGG | 0.272062 | 8_1:+1140343 | None:intergenic |
| GCCATTGTTGATCCTGCTTC+TGG | 0.280821 | 8_1:-1143577 | Msa1171510:CDS |
| CCAACATGGTGATAACTATT+TGG | 0.283627 | 8_1:-1143614 | Msa1171510:CDS |
| TTACCTTGCGGCATGTTTCT+TGG | 0.286349 | 8_1:+1141470 | None:intergenic |
| TGGTTGGATTGATGGTATTA+AGG | 0.289578 | 8_1:-1140900 | Msa1171510:CDS |
| CTATTGAGTGGGATGCTTCT+TGG | 0.291336 | 8_1:-1140445 | Msa1171510:CDS |
| AAGATGGAAATTTCTAATCT+TGG | 0.303255 | 8_1:-1140311 | Msa1171510:CDS |
| CACTTCCTTGTACATTGGTT+GGG | 0.316283 | 8_1:-1143095 | Msa1171510:CDS |
| GATTACAGGCTGTGATAAAA+AGG | 0.326265 | 8_1:-1142657 | Msa1171510:intron |
| TGTTGTTAGTATGAAGAGTA+TGG | 0.328585 | 8_1:-1143214 | Msa1171510:intron |
| TGGTGAAACTCTTCTTTGTT+TGG | 0.329318 | 8_1:+1141490 | None:intergenic |
| TGGAGGTTTGGATTCTTCAT+TGG | 0.339121 | 8_1:-1142599 | Msa1171510:CDS |
| AAAATGCTATGTTATGTATA+AGG | 0.341275 | 8_1:-1140158 | Msa1171510:three_prime_UTR |
| CTACTTCTCTTCCAGCCTTA+AGG | 0.348738 | 8_1:+1142349 | None:intergenic |
| CTCATTCTGTGTAGGGCTTA+AGG | 0.348833 | 8_1:-1142509 | Msa1171510:intron |
| TATGTAGTATAATAATATTC+TGG | 0.351740 | 8_1:+1140234 | None:intergenic |
| TCGGCAAGACTAACGGTTCC+TGG | 0.359524 | 8_1:-1140500 | Msa1171510:CDS |
| ATCTTTGGTATAATCTTCTC+TGG | 0.371278 | 8_1:+1140329 | None:intergenic |
| CATTGATCCCGAGTACAAAA+TGG | 0.371781 | 8_1:-1141233 | Msa1171510:intron |
| TTGTTATTGTAGGTTCTGTT+TGG | 0.373539 | 8_1:-1142982 | Msa1171510:intron |
| GTTGGCTATGGTTGGATTGA+TGG | 0.373548 | 8_1:-1140908 | Msa1171510:CDS |
| TATCATAAAATTCAGGTGAA+TGG | 0.381079 | 8_1:-1143420 | Msa1171510:intron |
| AAAGACAATAGTTTCTATAA+GGG | 0.381439 | 8_1:+1144966 | None:intergenic |
| CACAAAAGCTGCTAAGCAAT+GGG | 0.383437 | 8_1:-1142545 | Msa1171510:CDS |
| TACATTGGTTGGGGACTAGA+TGG | 0.386232 | 8_1:-1143085 | Msa1171510:intron |
| CTCAAAACTAGAGGATCATA+AGG | 0.390752 | 8_1:+1142815 | None:intergenic |
| TCACTTCCTTGTACATTGGT+TGG | 0.403117 | 8_1:-1143096 | Msa1171510:CDS |
| TGTGTACGGAATTTGTGATT+AGG | 0.411870 | 8_1:+1143360 | None:intergenic |
| CATATGATGTAACCACAATC+AGG | 0.412177 | 8_1:-1141630 | Msa1171510:CDS |
| TCAAATCATCAGGAGTCAAA+TGG | 0.416775 | 8_1:-1141573 | Msa1171510:CDS |
| TTAGGGTGCACCTGACCTTA+AGG | 0.420678 | 8_1:-1142364 | Msa1171510:intron |
| TGGTGGAGCCCACTCCAGTC+TGG | 0.424835 | 8_1:+1143634 | None:intergenic |
| CCATCTGGAAGAGCAGCATT+TGG | 0.431726 | 8_1:-1140407 | Msa1171510:CDS |
| AGAGAAGATTATACCAAAGA+TGG | 0.434916 | 8_1:-1140327 | Msa1171510:CDS |
| CTTTGAGAGGTCTTTCCCTC+AGG | 0.440586 | 8_1:-1140681 | Msa1171510:intron |
| GCCTTGATAAAATACACAAC+AGG | 0.442959 | 8_1:+1140181 | None:intergenic |
| AGGGTATTTGTATTTCCATA+AGG | 0.443024 | 8_1:-1141515 | Msa1171510:CDS |
| AGAGGATCATAAGGGGTTGT+TGG | 0.444662 | 8_1:+1142824 | None:intergenic |
| GGTGTCACTTCCTTGTACAT+TGG | 0.452637 | 8_1:-1143100 | Msa1171510:CDS |
| TGTGGTATACTTGCTGTACT+TGG | 0.453089 | 8_1:-1144930 | Msa1171510:CDS |
| GAATCGAGAAATGGATACTA+AGG | 0.458386 | 8_1:-1141103 | Msa1171510:CDS |
| TCAAAACTAGAGGATCATAA+GGG | 0.460214 | 8_1:+1142816 | None:intergenic |
| TGTCTCATATTAGCTTTGAA+TGG | 0.461591 | 8_1:+1140283 | None:intergenic |
| TCAAGCAACCTTGATCCATC+TGG | 0.462431 | 8_1:-1140422 | Msa1171510:CDS |
| TAGAGTACCTTAGGCAGATA+AGG | 0.471099 | 8_1:+1141056 | None:intergenic |
| AAGAAGGAAGAATCGAGAAA+TGG | 0.471711 | 8_1:-1141112 | Msa1171510:CDS |
| TCTCTTCCAGCCTTAAGGTC+AGG | 0.474929 | 8_1:+1142354 | None:intergenic |
| ACTTCCTTGTACATTGGTTG+GGG | 0.475172 | 8_1:-1143094 | Msa1171510:CDS |
| TAATATGCTTCTTTGGTAAG+TGG | 0.476674 | 8_1:+1140716 | None:intergenic |
| TCTCGAAAGATCAAATCATC+AGG | 0.483191 | 8_1:-1141583 | Msa1171510:CDS |
| TGAAGCACCGTGGTCCAGAC+TGG | 0.485903 | 8_1:-1143648 | Msa1171510:CDS |
| CTGTGATGTTATTGCACACC+TGG | 0.486927 | 8_1:-1143331 | Msa1171510:intron |
| TTTCAGATAAAACATGAAGA+AGG | 0.488675 | 8_1:-1141128 | Msa1171510:intron |
| TTATGTTAAATTTGAATGCA+AGG | 0.489283 | 8_1:-1140016 | Msa1171510:three_prime_UTR |
| TGCAGATCAAAGCTCTTCAT+AGG | 0.490172 | 8_1:-1141351 | Msa1171510:intron |
| AAATTACACTCATTCTGTGT+AGG | 0.494980 | 8_1:-1142517 | Msa1171510:CDS |
| CAAATCATCAGGAGTCAAAT+GGG | 0.497991 | 8_1:-1141572 | Msa1171510:CDS |
| GCACAAAAGCTGCTAAGCAA+TGG | 0.498472 | 8_1:-1142546 | Msa1171510:CDS |
| CAACAGTTTCATTGTTGCAA+GGG | 0.499051 | 8_1:-1143131 | Msa1171510:CDS |
| ATTGTTGCAAGGGATGCTAT+AGG | 0.499242 | 8_1:-1143121 | Msa1171510:CDS |
| AAATAAATCAACATATGCAT+GGG | 0.500130 | 8_1:-1141311 | Msa1171510:CDS |
| TTGGTAAGTGGAGTGTTGAA+AGG | 0.504831 | 8_1:+1140728 | None:intergenic |
| CTGCTCTTCCAGATGGATCA+AGG | 0.507380 | 8_1:+1140414 | None:intergenic |
| TTTGAGTCTTGCCTTCTCAA+AGG | 0.510674 | 8_1:+1142787 | None:intergenic |
| CCAAATGCTGCTCTTCCAGA+TGG | 0.513203 | 8_1:+1140407 | None:intergenic |
| AAGACCGGGAGTTTCGTAGA+TGG | 0.513657 | 8_1:-1142880 | Msa1171510:CDS |
| GGATTGCATCAGAATTAAAA+GGG | 0.514030 | 8_1:-1142961 | Msa1171510:CDS |
| GTGATGGAGTTGGCTATGGT+TGG | 0.516816 | 8_1:-1140916 | Msa1171510:CDS |
| CTGATGACTCACAAGCTAAG+AGG | 0.518775 | 8_1:-1144902 | Msa1171510:CDS |
| TCTACAATCATGAAGACCTC+AGG | 0.520006 | 8_1:-1143392 | Msa1171510:CDS |
| ATTTGTACTCGAGCAAAGAC+CGG | 0.520883 | 8_1:-1142895 | Msa1171510:CDS |
| TTCAGTGATGGAGTTGGCTA+TGG | 0.523214 | 8_1:-1140920 | Msa1171510:CDS |
| CAAATAAATCAACATATGCA+TGG | 0.524556 | 8_1:-1141312 | Msa1171510:CDS |
| AATTACACTCATTCTGTGTA+GGG | 0.525633 | 8_1:-1142516 | Msa1171510:CDS |
| AGAGGTTGATCACCAGAAGC+AGG | 0.531123 | 8_1:+1143565 | None:intergenic |
| ATAACTATTTGGCTCATCAA+AGG | 0.533219 | 8_1:-1143603 | Msa1171510:CDS |
| GGTGCACCTGACCTTAAGGC+TGG | 0.541650 | 8_1:-1142360 | Msa1171510:CDS |
| AGAAAATCCTTATCTGCCTA+AGG | 0.542451 | 8_1:-1141063 | Msa1171510:intron |
| TTTAAAAGAAAGACTAGATG+TGG | 0.542999 | 8_1:+1140101 | None:intergenic |
| TAGTAAACTGAAATTCATGA+TGG | 0.544517 | 8_1:+1142307 | None:intergenic |
| AATAGTTATCACCATGTTGG+TGG | 0.545301 | 8_1:+1143617 | None:intergenic |
| AAATGGGTGATTTCTGGAGA+AGG | 0.550290 | 8_1:-1141556 | Msa1171510:CDS |
| ACCGTGGTCCAGACTGGAGT+GGG | 0.551709 | 8_1:-1143642 | Msa1171510:CDS |
| TTTGTACTCGAGCAAAGACC+GGG | 0.553206 | 8_1:-1142894 | Msa1171510:CDS |
| CAGAAGGAACAGTTCAGTGA+TGG | 0.554559 | 8_1:-1140932 | Msa1171510:CDS |
| AGGTGTTGCTGCCCTGATTG+TGG | 0.554777 | 8_1:+1141618 | None:intergenic |
| ACAACAGTTTCATTGTTGCA+AGG | 0.557383 | 8_1:-1143132 | Msa1171510:CDS |
| ATTGGATAAAATGTGAAGAG+AGG | 0.559792 | 8_1:+1145020 | None:intergenic |
| TTTGAGGAATGCCTTTGAGA+AGG | 0.562136 | 8_1:-1142798 | Msa1171510:intron |
| GGATTTCATAAAAGTTGCAA+TGG | 0.566188 | 8_1:-1141257 | Msa1171510:CDS |
| TTTCGAGACATCAGAAACAT+AGG | 0.569570 | 8_1:+1141598 | None:intergenic |
| GCATCCTTGAGCTTTCTCGC+AGG | 0.571788 | 8_1:-1144875 | Msa1171510:intron |
| CATCACAGTCACATTGTGTA+CGG | 0.573999 | 8_1:+1143346 | None:intergenic |
| TGATGACTCACAAGCTAAGA+GGG | 0.575223 | 8_1:-1144901 | Msa1171510:CDS |
| AGCAGTTACTGCTAGATACC+TGG | 0.575470 | 8_1:-1142572 | Msa1171510:CDS |
| GTAGAACTCGGCAAGACTAA+CGG | 0.589213 | 8_1:-1140507 | Msa1171510:intron |
| CATGCAACACTAGCTCCTCC+AGG | 0.589828 | 8_1:+1140482 | None:intergenic |
| GAACAGTTCAGTGATGGAGT+TGG | 0.592459 | 8_1:-1140926 | Msa1171510:CDS |
| CGAGAAATGGATACTAAGGA+AGG | 0.594712 | 8_1:-1141099 | Msa1171510:CDS |
| TATAGTCAATAATTGCATAG+AGG | 0.594968 | 8_1:-1140213 | Msa1171510:three_prime_UTR |
| TTGATGACTGATGTGCCGTT+CGG | 0.596910 | 8_1:-1142634 | Msa1171510:CDS |
| ACTATAGAATGATCTTTGAG+AGG | 0.598679 | 8_1:-1140694 | Msa1171510:CDS |
| AAAACAAGGTGCAAAGAGTG+TGG | 0.599956 | 8_1:+1145069 | None:intergenic |
| CCAAATAGTTATCACCATGT+TGG | 0.601085 | 8_1:+1143614 | None:intergenic |
| GGATGGCATAGATGCAATTG+AGG | 0.606055 | 8_1:-1141674 | Msa1171510:CDS |
| ATTGCCTGCGAGAAAGCTCA+AGG | 0.606762 | 8_1:+1144871 | None:intergenic |
| GTAGATGGTACAATCCTCCA+TGG | 0.607175 | 8_1:-1142865 | Msa1171510:CDS |
| TAGTCCCCAACCAATGTACA+AGG | 0.608478 | 8_1:+1143090 | None:intergenic |
| CACAGAGAAAGCTATTGAGT+GGG | 0.608617 | 8_1:-1140456 | Msa1171510:CDS |
| GCACAGAGAAAGCTATTGAG+TGG | 0.609213 | 8_1:-1140457 | Msa1171510:CDS |
| GATTTGTCTTCATTGAAGAG+AGG | 0.610358 | 8_1:+1143547 | None:intergenic |
| CACCGTGGTCCAGACTGGAG+TGG | 0.611314 | 8_1:-1143643 | Msa1171510:CDS |
| AGACAAATCTATTATTGTCA+CGG | 0.614131 | 8_1:-1143533 | Msa1171510:intron |
| TGTACCATCTACGAAACTCC+CGG | 0.614554 | 8_1:+1142876 | None:intergenic |
| GATTAGGCAATTGTTTCCTG+AGG | 0.616657 | 8_1:+1143376 | None:intergenic |
| AAGGCATTCCTCAAAACTAG+AGG | 0.619679 | 8_1:+1142806 | None:intergenic |
| AGCTAATATGAGACATGGCA+AGG | 0.619874 | 8_1:-1140275 | Msa1171510:exon |
| ATATGATGTAACCACAATCA+GGG | 0.627367 | 8_1:-1141629 | Msa1171510:CDS |
| GCCCACTCCAGTCTGGACCA+CGG | 0.634064 | 8_1:+1143641 | None:intergenic |
| TTCAAAGCTAATATGAGACA+TGG | 0.641602 | 8_1:-1140280 | Msa1171510:exon |
| TGGAGTGGGCTCCACCAACA+TGG | 0.641715 | 8_1:-1143628 | Msa1171510:CDS |
| CCAGATAGTAAAACACCGAA+CGG | 0.643802 | 8_1:+1142619 | None:intergenic |
| TTGCTCGAGTACAAATGACC+AGG | 0.644299 | 8_1:+1142902 | None:intergenic |
| ATAATTGCCTCATTGAACCA+TGG | 0.655833 | 8_1:+1142848 | None:intergenic |
| TCACCAAGAAACATGCCGCA+AGG | 0.655836 | 8_1:-1141473 | Msa1171510:intron |
| CAAAACTAGAGGATCATAAG+GGG | 0.656036 | 8_1:+1142817 | None:intergenic |
| AATAAATCAACATATGCATG+GGG | 0.661879 | 8_1:-1141310 | Msa1171510:CDS |
| CAATCCTCCATGGTTCAATG+AGG | 0.663563 | 8_1:-1142855 | Msa1171510:CDS |
| ACCAGAAGCAGGATCAACAA+TGG | 0.667593 | 8_1:+1143576 | None:intergenic |
| CTCGAGTACAAATGACCAGG+TGG | 0.689124 | 8_1:+1142905 | None:intergenic |
| ATTGCCTCATTGAACCATGG+AGG | 0.695910 | 8_1:+1142851 | None:intergenic |
| TCTTTGATCATCACAATGTG+TGG | 0.696303 | 8_1:-1144948 | Msa1171510:exon |
| ACAAAAGCTGCTAAGCAATG+GGG | 0.697354 | 8_1:-1142544 | Msa1171510:CDS |
| GCAAGACTAACGGTTCCTGG+AGG | 0.731795 | 8_1:-1140497 | Msa1171510:CDS |
| GTTACTGCTAGATACCTGGC+CGG | 0.738427 | 8_1:-1142568 | Msa1171510:CDS |
| TGTCACAGATTGAAGCACCG+TGG | 0.798262 | 8_1:-1143658 | Msa1171510:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATAAAAAACTCT+AGG | + | chr8_1:1140381-1140400 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTGTATTTTTG+TGG | - | chr8_1:1140394-1140413 | Msa1171510:CDS | 10.0% |
| !!! | AAAATATTTTAGTTTTAAGA+GGG | - | chr8_1:1140548-1140567 | Msa1171510:intron | 10.0% |
| !! | AATACTAATTAATACATATA+TGG | - | chr8_1:1140601-1140620 | Msa1171510:intron | 10.0% |
| !! | ATATAATTATCCATTTAAAT+TGG | - | chr8_1:1140847-1140866 | Msa1171510:intron | 10.0% |
| !! | TATAATTATCCATTTAAATT+GGG | - | chr8_1:1140848-1140867 | Msa1171510:intron | 10.0% |
| !!! | TTATTGATTATTATTCTAAT+TGG | + | chr8_1:1141349-1141368 | None:intergenic | 10.0% |
| !!! | TAAATTTTATCATAAAATTC+AGG | - | chr8_1:1141664-1141683 | Msa1171510:CDS | 10.0% |
| !!! | CAAAATATTTTAGTTTTAAG+AGG | - | chr8_1:1140547-1140566 | Msa1171510:intron | 15.0% |
| !!! | TTTTTTCAATTGCAAAATAT+TGG | + | chr8_1:1140779-1140798 | None:intergenic | 15.0% |
| !!! | ATTCTCTTTAAAATATTTGA+TGG | + | chr8_1:1140809-1140828 | None:intergenic | 15.0% |
| !! | AATAAACAAAAATAAGACAT+GGG | - | chr8_1:1141146-1141165 | Msa1171510:intron | 15.0% |
| !!! | TTTTATTTTAATAAATCACG+TGG | - | chr8_1:1141264-1141283 | Msa1171510:CDS | 15.0% |
| !!! | TTTATTTTAATAAATCACGT+GGG | - | chr8_1:1141265-1141284 | Msa1171510:CDS | 15.0% |
| !! | TAATAATCAATAAGTAACTT+TGG | - | chr8_1:1141356-1141375 | Msa1171510:intron | 15.0% |
| !! | ACTATAGAATATTATTACAA+GGG | + | chr8_1:1141594-1141613 | None:intergenic | 15.0% |
| !! | AACTATAGAATATTATTACA+AGG | + | chr8_1:1141595-1141614 | None:intergenic | 15.0% |
| !!! | ATTAGCAATGTTTTAAATAA+AGG | + | chr8_1:1141821-1141840 | None:intergenic | 15.0% |
| !!! | ATTGCTTTAATCTTTATTTA+TGG | - | chr8_1:1142696-1142715 | Msa1171510:intron | 15.0% |
| !!! | CACATTTTTATAATATCATA+GGG | - | chr8_1:1143338-1143357 | Msa1171510:CDS | 15.0% |
| !!! | ACATTTTTATAATATCATAG+GGG | - | chr8_1:1143339-1143358 | Msa1171510:CDS | 15.0% |
| !! | TAATAAAATGTTACATCTTT+AGG | + | chr8_1:1143925-1143944 | None:intergenic | 15.0% |
| !! | TATGTAGTATAATAATATTC+TGG | + | chr8_1:1144860-1144879 | None:intergenic | 15.0% |
| !! | AAAGACAATAGTTTCTATAA+GGG | + | chr8_1:1140128-1140147 | None:intergenic | 20.0% |
| !!! | CTTTTATATAAATACCCTTT+AGG | - | chr8_1:1140284-1140303 | Msa1171510:exon | 20.0% |
| !! | AATATCAAAGTTAACCTAAA+GGG | + | chr8_1:1140301-1140320 | None:intergenic | 20.0% |
| !! | AAATATCAAAGTTAACCTAA+AGG | + | chr8_1:1140302-1140321 | None:intergenic | 20.0% |
| !! | ATATTAATCCTTGATATCAA+AGG | + | chr8_1:1140445-1140464 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAATTCACTTTTT+AGG | - | chr8_1:1140986-1141005 | Msa1171510:intron | 20.0% |
| !! | GAATAAACAAAAATAAGACA+TGG | - | chr8_1:1141145-1141164 | Msa1171510:intron | 20.0% |
| !! | ATAAACAAAAATAAGACATG+GGG | - | chr8_1:1141147-1141166 | Msa1171510:intron | 20.0% |
| !! | AAAATAAAAATTCCACATGT+AGG | + | chr8_1:1141253-1141272 | None:intergenic | 20.0% |
| !!! | TTATTCTAATTGGACTTTTT+TGG | + | chr8_1:1141339-1141358 | None:intergenic | 20.0% |
| !! | TGCTATATAGTATAATAAAG+TGG | - | chr8_1:1141631-1141650 | Msa1171510:CDS | 20.0% |
| !!! | ACCATTAATGTTATTGATTT+TGG | - | chr8_1:1141847-1141866 | Msa1171510:intron | 20.0% |
| !! | ACCAAAATCAATAACATTAA+TGG | + | chr8_1:1141851-1141870 | None:intergenic | 20.0% |
| !!! | GAATGAAAAATCAATTTTAG+TGG | - | chr8_1:1142625-1142644 | Msa1171510:CDS | 20.0% |
| !! | GGATTATTAAAAAAAATCGA+TGG | - | chr8_1:1142646-1142665 | Msa1171510:CDS | 20.0% |
| !! | TGGAAAAAAACATTCATTTA+AGG | - | chr8_1:1142666-1142685 | Msa1171510:intron | 20.0% |
| !!! | TTATTTATGGTATGTTGATT+AGG | - | chr8_1:1142709-1142728 | Msa1171510:intron | 20.0% |
| !!! | TATTTATGGTATGTTGATTA+GGG | - | chr8_1:1142710-1142729 | Msa1171510:intron | 20.0% |
| !!! | GCACATTTTTATAATATCAT+AGG | - | chr8_1:1143337-1143356 | Msa1171510:CDS | 20.0% |
| !!! | CATTTTTATAATATCATAGG+GGG | - | chr8_1:1143340-1143359 | Msa1171510:CDS | 20.0% |
| !! | AAATAAATCAACATATGCAT+GGG | - | chr8_1:1143780-1143799 | Msa1171510:intron | 20.0% |
| !! | CAACAAAAGTAAAATGAAAT+TGG | + | chr8_1:1144260-1144279 | None:intergenic | 20.0% |
| !!! | AATAATATTCTGGCTTTATT+AGG | + | chr8_1:1144850-1144869 | None:intergenic | 20.0% |
| !! | AAAATGCTATGTTATGTATA+AGG | - | chr8_1:1144933-1144952 | Msa1171510:CDS | 20.0% |
| !! | AACACTATCATATTGTAATT+TGG | - | chr8_1:1145029-1145048 | Msa1171510:five_prime_UTR | 20.0% |
| !! | TTATGTTAAATTTGAATGCA+AGG | - | chr8_1:1145075-1145094 | Msa1171510:five_prime_UTR | 20.0% |
| ! | AGACAAAGAAAAAAAAGGAT+TGG | + | chr8_1:1140092-1140111 | None:intergenic | 25.0% |
| ! | TGAAGAGACAAAGAAAAAAA+AGG | + | chr8_1:1140097-1140116 | None:intergenic | 25.0% |
| ! | CAAAGACAATAGTTTCTATA+AGG | + | chr8_1:1140129-1140148 | None:intergenic | 25.0% |
| ! | ATATTAAGAATTGAGTGATG+AGG | - | chr8_1:1140500-1140519 | Msa1171510:CDS | 25.0% |
| ! | TACTAGAAAAATCACCAAAA+TGG | - | chr8_1:1140689-1140708 | Msa1171510:CDS | 25.0% |
| ! | TTCAATTGCAAAATATTGGA+TGG | + | chr8_1:1140775-1140794 | None:intergenic | 25.0% |
| !! | TAGTAACTAGTAGTTAGTTT+AGG | - | chr8_1:1140905-1140924 | Msa1171510:CDS | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | + | chr8_1:1141085-1141104 | None:intergenic | 25.0% |
| ! | AATTGAATGAACCTAAAAAG+TGG | - | chr8_1:1141061-1141080 | Msa1171510:intron | 25.0% |
| !!! | TAAGCAAAAATCCACTTTTT+AGG | + | chr8_1:1141075-1141094 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | - | chr8_1:1141085-1141104 | Msa1171510:CDS | 25.0% |
| ! | TGTTGTTATGATGCAATAAT+TGG | - | chr8_1:1141176-1141195 | Msa1171510:intron | 25.0% |
| ! | TTATGATGCAATAATTGGTT+CGG | - | chr8_1:1141181-1141200 | Msa1171510:intron | 25.0% |
| !!! | AAATTAATTTGTCCTACATG+TGG | - | chr8_1:1141238-1141257 | Msa1171510:CDS | 25.0% |
| ! | TGGACTTTATGTATATGAAT+GGG | + | chr8_1:1141303-1141322 | None:intergenic | 25.0% |
| ! | TTGGACTTTATGTATATGAA+TGG | + | chr8_1:1141304-1141323 | None:intergenic | 25.0% |
| !!! | TTTTTGGTAGTGATTCTAAT+TGG | + | chr8_1:1141323-1141342 | None:intergenic | 25.0% |
| ! | AGACAAATCTATTATTGTCA+CGG | - | chr8_1:1141558-1141577 | Msa1171510:CDS | 25.0% |
| ! | TATCATAAAATTCAGGTGAA+TGG | - | chr8_1:1141671-1141690 | Msa1171510:CDS | 25.0% |
| !! | TGAATAATTTGTGACAAGTT+TGG | - | chr8_1:1142079-1142098 | Msa1171510:intron | 25.0% |
| !!! | CAATTCTCACATTTTTAAGT+CGG | - | chr8_1:1142361-1142380 | Msa1171510:CDS | 25.0% |
| ! | TAGTAAACTGAAATTCATGA+TGG | + | chr8_1:1142787-1142806 | None:intergenic | 25.0% |
| ! | TGAATTTCAGTTTACTATTC+AGG | - | chr8_1:1142790-1142809 | Msa1171510:intron | 25.0% |
| !!! | TTTATTTTTGTGGTGTATGT+AGG | - | chr8_1:1143396-1143415 | Msa1171510:CDS | 25.0% |
| ! | CAAATAAATCAACATATGCA+TGG | - | chr8_1:1143779-1143798 | Msa1171510:intron | 25.0% |
| ! | AATAAATCAACATATGCATG+GGG | - | chr8_1:1143781-1143800 | Msa1171510:intron | 25.0% |
| !! | TATCATTACCATTTTGTACT+CGG | + | chr8_1:1143869-1143888 | None:intergenic | 25.0% |
| ! | TTTCAGATAAAACATGAAGA+AGG | - | chr8_1:1143963-1143982 | Msa1171510:intron | 25.0% |
| ! | TGAAATTGGAAAGAAAATGT+TGG | + | chr8_1:1144246-1144265 | None:intergenic | 25.0% |
| !!! | GTTCTTGAATTTTTTCGTAT+AGG | - | chr8_1:1144302-1144321 | Msa1171510:intron | 25.0% |
| ! | TCTATAGTAATATGCTTCTT+TGG | + | chr8_1:1144385-1144404 | None:intergenic | 25.0% |
| !! | ATTTTTATAACAATGTCGCT+TGG | + | chr8_1:1144466-1144485 | None:intergenic | 25.0% |
| ! | ATTTGATTAGGCCTTTATTA+AGG | + | chr8_1:1144548-1144567 | None:intergenic | 25.0% |
| ! | AGATTAGAAATTTCCATCTT+TGG | + | chr8_1:1144780-1144799 | None:intergenic | 25.0% |
| ! | AAGATGGAAATTTCTAATCT+TGG | - | chr8_1:1144780-1144799 | Msa1171510:intron | 25.0% |
| ! | TATAGTCAATAATTGCATAG+AGG | - | chr8_1:1144878-1144897 | Msa1171510:CDS | 25.0% |
| ! | TTTAAAAGAAAGACTAGATG+TGG | + | chr8_1:1144993-1145012 | None:intergenic | 25.0% |
| !! | GTCTTTCTTTTAAATTGATG+TGG | - | chr8_1:1144999-1145018 | Msa1171510:five_prime_UTR | 25.0% |
| ATTGGATAAAATGTGAAGAG+AGG | + | chr8_1:1140074-1140093 | None:intergenic | 30.0% | |
| GGTAAATAAGTGTTTGATCA+TGG | + | chr8_1:1140360-1140379 | None:intergenic | 30.0% | |
| ! | AATAATAAGCAGCACCATTT+TGG | + | chr8_1:1140706-1140725 | None:intergenic | 30.0% |
| TCACTATGACATTTAATACG+AGG | + | chr8_1:1140734-1140753 | None:intergenic | 30.0% | |
| ACAACTGAAAGATAAGCATT+GGG | + | chr8_1:1140875-1140894 | None:intergenic | 30.0% | |
| TACAACTGAAAGATAAGCAT+TGG | + | chr8_1:1140876-1140895 | None:intergenic | 30.0% | |
| AAACATACTTGACTTTGACA+AGG | - | chr8_1:1140930-1140949 | Msa1171510:CDS | 30.0% | |
| TATTGCATCATAACAACATG+TGG | + | chr8_1:1141174-1141193 | None:intergenic | 30.0% | |
| !!! | TCTTGTTCGTTGATTTTGTT+GGG | + | chr8_1:1141214-1141233 | None:intergenic | 30.0% |
| ! | ATAACTATTTGGCTCATCAA+AGG | - | chr8_1:1141488-1141507 | Msa1171510:CDS | 30.0% |
| TGTTGTTAGTATGAAGAGTA+TGG | - | chr8_1:1141877-1141896 | Msa1171510:intron | 30.0% | |
| ! | AGAGTATGGAGAAAATTTTG+TGG | - | chr8_1:1141891-1141910 | Msa1171510:intron | 30.0% |
| ! | AGAAAATTTTGTGGACATGT+TGG | - | chr8_1:1141900-1141919 | Msa1171510:intron | 30.0% |
| ! | TATCTTTTCATTTGTTCTGC+TGG | - | chr8_1:1141927-1141946 | Msa1171510:intron | 30.0% |
| ! | TTGTTATTGTAGGTTCTGTT+TGG | - | chr8_1:1142109-1142128 | Msa1171510:intron | 30.0% |
| TGGATTGCATCAGAATTAAA+AGG | - | chr8_1:1142129-1142148 | Msa1171510:intron | 30.0% | |
| GGATTGCATCAGAATTAAAA+GGG | - | chr8_1:1142130-1142149 | Msa1171510:intron | 30.0% | |
| TCAAAACTAGAGGATCATAA+GGG | + | chr8_1:1142278-1142297 | None:intergenic | 30.0% | |
| !!! | ATTTTTAAGTCGGTTCTGTA+AGG | - | chr8_1:1142371-1142390 | Msa1171510:intron | 30.0% |
| TTAGACTCAGTATAGCTAAT+AGG | - | chr8_1:1142399-1142418 | Msa1171510:intron | 30.0% | |
| GGATTGATATGTTTGATTAC+AGG | - | chr8_1:1142420-1142439 | Msa1171510:intron | 30.0% | |
| AAATTACACTCATTCTGTGT+AGG | - | chr8_1:1142574-1142593 | Msa1171510:CDS | 30.0% | |
| AATTACACTCATTCTGTGTA+GGG | - | chr8_1:1142575-1142594 | Msa1171510:CDS | 30.0% | |
| CTCAAAATTGCAAAAAGTTG+CGG | - | chr8_1:1142975-1142994 | Msa1171510:intron | 30.0% | |
| ATATGATGTAACCACAATCA+GGG | - | chr8_1:1143462-1143481 | Msa1171510:intron | 30.0% | |
| ! | AGGGTATTTGTATTTCCATA+AGG | - | chr8_1:1143576-1143595 | Msa1171510:CDS | 30.0% |
| ATGAAATCCTTGTCCAAAAA+TGG | + | chr8_1:1143823-1143842 | None:intergenic | 30.0% | |
| GGATTTCATAAAAGTTGCAA+TGG | - | chr8_1:1143834-1143853 | Msa1171510:intron | 30.0% | |
| ! | ATCATTACCATTTTGTACTC+GGG | + | chr8_1:1143868-1143887 | None:intergenic | 30.0% |
| TCGACATAAATTGTAGCAAA+TGG | + | chr8_1:1144071-1144090 | None:intergenic | 30.0% | |
| ! | TCATGCAGCACATTTTATAT+AGG | - | chr8_1:1144136-1144155 | Msa1171510:intron | 30.0% |
| TAATATGCTTCTTTGGTAAG+TGG | + | chr8_1:1144378-1144397 | None:intergenic | 30.0% | |
| ACTATAGAATGATCTTTGAG+AGG | - | chr8_1:1144397-1144416 | Msa1171510:intron | 30.0% | |
| TGATTGATTAAGTTACCTGA+GGG | + | chr8_1:1144428-1144447 | None:intergenic | 30.0% | |
| TTGATTGATTAAGTTACCTG+AGG | + | chr8_1:1144429-1144448 | None:intergenic | 30.0% | |
| TCCCAACATAACCTTAATAA+AGG | - | chr8_1:1144534-1144553 | Msa1171510:intron | 30.0% | |
| GCCTTTATTAAGGTTATGTT+GGG | + | chr8_1:1144538-1144557 | None:intergenic | 30.0% | |
| ATCTTTGGTATAATCTTCTC+TGG | + | chr8_1:1144765-1144784 | None:intergenic | 30.0% | |
| AGAGAAGATTATACCAAAGA+TGG | - | chr8_1:1144764-1144783 | Msa1171510:intron | 30.0% | |
| !! | TGTCTCATATTAGCTTTGAA+TGG | + | chr8_1:1144811-1144830 | None:intergenic | 30.0% |
| TTCAAAGCTAATATGAGACA+TGG | - | chr8_1:1144811-1144830 | Msa1171510:intron | 30.0% | |
| AGAAGAAGACACGAAAAACA+AGG | + | chr8_1:1140039-1140058 | None:intergenic | 35.0% | |
| TCTTTGATCATCACAATGTG+TGG | - | chr8_1:1140143-1140162 | Msa1171510:three_prime_UTR | 35.0% | |
| ! | TTTTGTGGTTTACAAGCTCA+TGG | - | chr8_1:1140409-1140428 | Msa1171510:CDS | 35.0% |
| TTTGTGGTTTACAAGCTCAT+GGG | - | chr8_1:1140410-1140429 | Msa1171510:CDS | 35.0% | |
| ! | CAACTGAAAGATAAGCATTG+GGG | + | chr8_1:1140874-1140893 | None:intergenic | 35.0% |
| !!! | CTCTTGTTCGTTGATTTTGT+TGG | + | chr8_1:1141215-1141234 | None:intergenic | 35.0% |
| AATAGTTATCACCATGTTGG+TGG | + | chr8_1:1141477-1141496 | None:intergenic | 35.0% | |
| CCAAATAGTTATCACCATGT+TGG | + | chr8_1:1141480-1141499 | None:intergenic | 35.0% | |
| CCAACATGGTGATAACTATT+TGG | - | chr8_1:1141477-1141496 | Msa1171510:CDS | 35.0% | |
| GATTTGTCTTCATTGAAGAG+AGG | + | chr8_1:1141547-1141566 | None:intergenic | 35.0% | |
| TGTGTACGGAATTTGTGATT+AGG | + | chr8_1:1141734-1141753 | None:intergenic | 35.0% | |
| ! | AATTTTGTGGACATGTTGGA+TGG | - | chr8_1:1141904-1141923 | Msa1171510:intron | 35.0% |
| ACAACAGTTTCATTGTTGCA+AGG | - | chr8_1:1141959-1141978 | Msa1171510:intron | 35.0% | |
| CAACAGTTTCATTGTTGCAA+GGG | - | chr8_1:1141960-1141979 | Msa1171510:intron | 35.0% | |
| !!! | TGGCACGTTTTTGTTATTGT+AGG | - | chr8_1:1142099-1142118 | Msa1171510:intron | 35.0% |
| !!! | CATTTTGAAGTTTTTCCACC+TGG | - | chr8_1:1142171-1142190 | Msa1171510:intron | 35.0% |
| ATAATTGCCTCATTGAACCA+TGG | + | chr8_1:1142246-1142265 | None:intergenic | 35.0% | |
| CAAAACTAGAGGATCATAAG+GGG | + | chr8_1:1142277-1142296 | None:intergenic | 35.0% | |
| CTCAAAACTAGAGGATCATA+AGG | + | chr8_1:1142279-1142298 | None:intergenic | 35.0% | |
| !!! | CTTATGATCCTCTAGTTTTG+AGG | - | chr8_1:1142277-1142296 | Msa1171510:intron | 35.0% |
| CTAAGCGCTTTATAAACTCT+TGG | + | chr8_1:1142340-1142359 | None:intergenic | 35.0% | |
| GATTACAGGCTGTGATAAAA+AGG | - | chr8_1:1142434-1142453 | Msa1171510:intron | 35.0% | |
| ! | TGTTTTACTATCTGGAGGTT+TGG | - | chr8_1:1142480-1142499 | Msa1171510:intron | 35.0% |
| ! | AGAGAAGTAGCAGACTTTTT+AGG | - | chr8_1:1142755-1142774 | Msa1171510:intron | 35.0% |
| CTCATAATTGCGAAAAGTTG+CGG | - | chr8_1:1142844-1142863 | Msa1171510:CDS | 35.0% | |
| CAAAAAGTTGCGGTCTAATA+GGG | - | chr8_1:1142985-1143004 | Msa1171510:intron | 35.0% | |
| ACGAAAAGTTGCTGTCAAAT+AGG | - | chr8_1:1143113-1143132 | Msa1171510:CDS | 35.0% | |
| CGAAAAGTTGCTGTCAAATA+GGG | - | chr8_1:1143114-1143133 | Msa1171510:CDS | 35.0% | |
| TTGATGTCACAGTCTGAATT+TGG | - | chr8_1:1143180-1143199 | Msa1171510:CDS | 35.0% | |
| TGATGTCACAGTCTGAATTT+GGG | - | chr8_1:1143181-1143200 | Msa1171510:CDS | 35.0% | |
| CGAAAAGTTGCAGTCAAATA+GGG | - | chr8_1:1143245-1143264 | Msa1171510:intron | 35.0% | |
| ! | TTTTTGTGGTGTATGTAGGA+TGG | - | chr8_1:1143400-1143419 | Msa1171510:CDS | 35.0% |
| CATATGATGTAACCACAATC+AGG | - | chr8_1:1143461-1143480 | Msa1171510:intron | 35.0% | |
| TTTCGAGACATCAGAAACAT+AGG | + | chr8_1:1143496-1143515 | None:intergenic | 35.0% | |
| TCTCGAAAGATCAAATCATC+AGG | - | chr8_1:1143508-1143527 | Msa1171510:intron | 35.0% | |
| TCAAATCATCAGGAGTCAAA+TGG | - | chr8_1:1143518-1143537 | Msa1171510:intron | 35.0% | |
| CAAATCATCAGGAGTCAAAT+GGG | - | chr8_1:1143519-1143538 | Msa1171510:intron | 35.0% | |
| ! | GAAGGATCTGATGAGATTTT+TGG | - | chr8_1:1143553-1143572 | Msa1171510:CDS | 35.0% |
| !! | GATCTGATGAGATTTTTGGA+GGG | - | chr8_1:1143557-1143576 | Msa1171510:CDS | 35.0% |
| TGGTGAAACTCTTCTTTGTT+TGG | + | chr8_1:1143604-1143623 | None:intergenic | 35.0% | |
| !! | AGAAGCTAGAGTACCATTTT+TGG | - | chr8_1:1143807-1143826 | Msa1171510:intron | 35.0% |
| !! | TAGAGTACCATTTTTGGACA+AGG | - | chr8_1:1143813-1143832 | Msa1171510:intron | 35.0% |
| AAGAAGGAAGAATCGAGAAA+TGG | - | chr8_1:1143979-1143998 | Msa1171510:intron | 35.0% | |
| GAATCGAGAAATGGATACTA+AGG | - | chr8_1:1143988-1144007 | Msa1171510:intron | 35.0% | |
| AGAAAATCCTTATCTGCCTA+AGG | - | chr8_1:1144028-1144047 | Msa1171510:intron | 35.0% | |
| ! | AAAGTAGAGTAGAGTACCTT+AGG | + | chr8_1:1144047-1144066 | None:intergenic | 35.0% |
| ! | GCACATTTTATATAGGCAGA+AGG | - | chr8_1:1144143-1144162 | Msa1171510:intron | 35.0% |
| ! | TGGTTGGATTGATGGTATTA+AGG | - | chr8_1:1144191-1144210 | Msa1171510:intron | 35.0% |
| ! | TGTTTACATGTTTTGCAGCA+TGG | + | chr8_1:1144218-1144237 | None:intergenic | 35.0% |
| GGCCTTTATTAAGGTTATGT+TGG | + | chr8_1:1144539-1144558 | None:intergenic | 35.0% | |
| CGAAACACAGAGATTTGATT+AGG | + | chr8_1:1144560-1144579 | None:intergenic | 35.0% | |
| ! | GTGTTTCGATTTGTAGAACT+CGG | - | chr8_1:1144572-1144591 | Msa1171510:intron | 35.0% |
| ! | GCCTGTTGTGTATTTTATCA+AGG | - | chr8_1:1144909-1144928 | Msa1171510:CDS | 35.0% |
| GCCTTGATAAAATACACAAC+AGG | + | chr8_1:1144913-1144932 | None:intergenic | 35.0% | |
| AAAACAAGGTGCAAAGAGTG+TGG | + | chr8_1:1140025-1140044 | None:intergenic | 40.0% | |
| !! | TGTGGTATACTTGCTGTACT+TGG | - | chr8_1:1140161-1140180 | Msa1171510:three_prime_UTR | 40.0% |
| TGATGACTCACAAGCTAAGA+GGG | - | chr8_1:1140190-1140209 | Msa1171510:three_prime_UTR | 40.0% | |
| GTGGTTGTCCTTTGATATCA+AGG | - | chr8_1:1140434-1140453 | Msa1171510:CDS | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | + | chr8_1:1141089-1141108 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | + | chr8_1:1141088-1141107 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | - | chr8_1:1141088-1141107 | Msa1171510:CDS | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | - | chr8_1:1141089-1141108 | Msa1171510:CDS | 40.0% | |
| TCTACAATCATGAAGACCTC+AGG | - | chr8_1:1141699-1141718 | Msa1171510:intron | 40.0% | |
| GATTAGGCAATTGTTTCCTG+AGG | + | chr8_1:1141718-1141737 | None:intergenic | 40.0% | |
| CATCACAGTCACATTGTGTA+CGG | + | chr8_1:1141748-1141767 | None:intergenic | 40.0% | |
| ATTGTTGCAAGGGATGCTAT+AGG | - | chr8_1:1141970-1141989 | Msa1171510:intron | 40.0% | |
| TCACTTCCTTGTACATTGGT+TGG | - | chr8_1:1141995-1142014 | Msa1171510:intron | 40.0% | |
| ! | CACTTCCTTGTACATTGGTT+GGG | - | chr8_1:1141996-1142015 | Msa1171510:intron | 40.0% |
| ! | ACTTCCTTGTACATTGGTTG+GGG | - | chr8_1:1141997-1142016 | Msa1171510:intron | 40.0% |
| ATTTGTACTCGAGCAAAGAC+CGG | - | chr8_1:1142196-1142215 | Msa1171510:intron | 40.0% | |
| ! | AAGGCATTCCTCAAAACTAG+AGG | + | chr8_1:1142288-1142307 | None:intergenic | 40.0% |
| ! | TTTGAGGAATGCCTTTGAGA+AGG | - | chr8_1:1142293-1142312 | Msa1171510:intron | 40.0% |
| TTTGAGTCTTGCCTTCTCAA+AGG | + | chr8_1:1142307-1142326 | None:intergenic | 40.0% | |
| CCAGATAGTAAAACACCGAA+CGG | + | chr8_1:1142475-1142494 | None:intergenic | 40.0% | |
| !!! | TTCGGTGTTTTACTATCTGG+AGG | - | chr8_1:1142475-1142494 | Msa1171510:intron | 40.0% |
| TGGAGGTTTGGATTCTTCAT+TGG | - | chr8_1:1142492-1142511 | Msa1171510:intron | 40.0% | |
| CACAAAAGCTGCTAAGCAAT+GGG | - | chr8_1:1142546-1142565 | Msa1171510:CDS | 40.0% | |
| ACAAAAGCTGCTAAGCAATG+GGG | - | chr8_1:1142547-1142566 | Msa1171510:CDS | 40.0% | |
| CGAAAAGTTGCGGTCAAATA+GGG | - | chr8_1:1142854-1142873 | Msa1171510:CDS | 40.0% | |
| CACAATAAAGACTGCGACAT+TGG | + | chr8_1:1142923-1142942 | None:intergenic | 40.0% | |
| CAATGTCGCAGTCTTTATTG+TGG | - | chr8_1:1142921-1142940 | Msa1171510:CDS | 40.0% | |
| GCAAAAAGTTGCGGTCTAAT+AGG | - | chr8_1:1142984-1143003 | Msa1171510:intron | 40.0% | |
| CATGCAGACATCAAAAACCT+TGG | - | chr8_1:1143032-1143051 | Msa1171510:intron | 40.0% | |
| ATAAATTCTGAGCGACACCA+AGG | + | chr8_1:1143052-1143071 | None:intergenic | 40.0% | |
| GCGAAAAGTTGCAGTCAAAT+AGG | - | chr8_1:1143244-1143263 | Msa1171510:intron | 40.0% | |
| TGAAGTCACAGTCTAGATTG+CGG | - | chr8_1:1143312-1143331 | Msa1171510:intron | 40.0% | |
| ! | AAATGGGTGATTTCTGGAGA+AGG | - | chr8_1:1143535-1143554 | Msa1171510:CDS | 40.0% |
| !! | GGATCTGATGAGATTTTTGG+AGG | - | chr8_1:1143556-1143575 | Msa1171510:CDS | 40.0% |
| !! | CTTCTTTGTTTGGTGCCTTA+TGG | + | chr8_1:1143594-1143613 | None:intergenic | 40.0% |
| GATGTAGGTCTATTACCTTG+CGG | + | chr8_1:1143636-1143655 | None:intergenic | 40.0% | |
| AAACATGAGCGATGTGATGT+AGG | + | chr8_1:1143651-1143670 | None:intergenic | 40.0% | |
| ATCACATCGCTCATGTTTGA+AGG | - | chr8_1:1143653-1143672 | Msa1171510:CDS | 40.0% | |
| TCACATCGCTCATGTTTGAA+GGG | - | chr8_1:1143654-1143673 | Msa1171510:intron | 40.0% | |
| TGCAGATCAAAGCTCTTCAT+AGG | - | chr8_1:1143740-1143759 | Msa1171510:intron | 40.0% | |
| CATTGATCCCGAGTACAAAA+TGG | - | chr8_1:1143858-1143877 | Msa1171510:intron | 40.0% | |
| CGAGAAATGGATACTAAGGA+AGG | - | chr8_1:1143992-1144011 | Msa1171510:intron | 40.0% | |
| ! | TAGAGTACCTTAGGCAGATA+AGG | + | chr8_1:1144038-1144057 | None:intergenic | 40.0% |
| !! | TTGGTAAGTGGAGTGTTGAA+AGG | + | chr8_1:1144366-1144385 | None:intergenic | 40.0% |
| CACAGAGAAAGCTATTGAGT+GGG | - | chr8_1:1144635-1144654 | Msa1171510:intron | 40.0% | |
| !! | TTTTGGCAACTGAGTTGACT+TGG | + | chr8_1:1144734-1144753 | None:intergenic | 40.0% |
| AGCTAATATGAGACATGGCA+AGG | - | chr8_1:1144816-1144835 | Msa1171510:intron | 40.0% | |
| CTGATGACTCACAAGCTAAG+AGG | - | chr8_1:1140189-1140208 | Msa1171510:three_prime_UTR | 45.0% | |
| AGAATTGAGTGATGAGGACG+AGG | - | chr8_1:1140506-1140525 | Msa1171510:CDS | 45.0% | |
| GAGGACGAGGAATGAAAGAA+TGG | - | chr8_1:1140519-1140538 | Msa1171510:intron | 45.0% | |
| GCATTGGGGCCCAATTTAAA+TGG | + | chr8_1:1140860-1140879 | None:intergenic | 45.0% | |
| GTAATGTGTCATACACCCTC+CGG | + | chr8_1:1141107-1141126 | None:intergenic | 45.0% | |
| ACCAGAAGCAGGATCAACAA+TGG | + | chr8_1:1141518-1141537 | None:intergenic | 45.0% | |
| CTGTGATGTTATTGCACACC+TGG | - | chr8_1:1141760-1141779 | Msa1171510:intron | 45.0% | |
| !! | GGTGTCACTTCCTTGTACAT+TGG | - | chr8_1:1141991-1142010 | Msa1171510:intron | 45.0% |
| TAGTCCCCAACCAATGTACA+AGG | + | chr8_1:1142004-1142023 | None:intergenic | 45.0% | |
| ! | TACATTGGTTGGGGACTAGA+TGG | - | chr8_1:1142006-1142025 | Msa1171510:intron | 45.0% |
| TTGCTCGAGTACAAATGACC+AGG | + | chr8_1:1142192-1142211 | None:intergenic | 45.0% | |
| TTTGTACTCGAGCAAAGACC+GGG | - | chr8_1:1142197-1142216 | Msa1171510:intron | 45.0% | |
| TGTACCATCTACGAAACTCC+CGG | + | chr8_1:1142218-1142237 | None:intergenic | 45.0% | |
| GTAGATGGTACAATCCTCCA+TGG | - | chr8_1:1142226-1142245 | Msa1171510:intron | 45.0% | |
| CAATCCTCCATGGTTCAATG+AGG | - | chr8_1:1142236-1142255 | Msa1171510:intron | 45.0% | |
| ATTGCCTCATTGAACCATGG+AGG | + | chr8_1:1142243-1142262 | None:intergenic | 45.0% | |
| AGAGGATCATAAGGGGTTGT+TGG | + | chr8_1:1142270-1142289 | None:intergenic | 45.0% | |
| ! | TTGATGACTGATGTGCCGTT+CGG | - | chr8_1:1142457-1142476 | Msa1171510:intron | 45.0% |
| !!! | CCGTTCGGTGTTTTACTATC+TGG | - | chr8_1:1142472-1142491 | Msa1171510:intron | 45.0% |
| AGCAGTTACTGCTAGATACC+TGG | - | chr8_1:1142519-1142538 | Msa1171510:CDS | 45.0% | |
| ! | TTGCTTAGCAGCTTTTGTGC+CGG | + | chr8_1:1142545-1142564 | None:intergenic | 45.0% |
| GCACAAAAGCTGCTAAGCAA+TGG | - | chr8_1:1142545-1142564 | Msa1171510:CDS | 45.0% | |
| CTCATTCTGTGTAGGGCTTA+AGG | - | chr8_1:1142582-1142601 | Msa1171510:CDS | 45.0% | |
| CTACTTCTCTTCCAGCCTTA+AGG | + | chr8_1:1142745-1142764 | None:intergenic | 45.0% | |
| GCGAAAAGTTGCGGTCAAAT+AGG | - | chr8_1:1142853-1142872 | Msa1171510:CDS | 45.0% | |
| GGATGGCATAGATGCAATTG+AGG | - | chr8_1:1143417-1143436 | Msa1171510:intron | 45.0% | |
| GGAGTCAAATGGGTGATTTC+TGG | - | chr8_1:1143529-1143548 | Msa1171510:intron | 45.0% | |
| TTACCTTGCGGCATGTTTCT+TGG | + | chr8_1:1143624-1143643 | None:intergenic | 45.0% | |
| CAGAAGGAACAGTTCAGTGA+TGG | - | chr8_1:1144159-1144178 | Msa1171510:intron | 45.0% | |
| ! | GAACAGTTCAGTGATGGAGT+TGG | - | chr8_1:1144165-1144184 | Msa1171510:intron | 45.0% |
| ! | TTCAGTGATGGAGTTGGCTA+TGG | - | chr8_1:1144171-1144190 | Msa1171510:intron | 45.0% |
| GTTGGCTATGGTTGGATTGA+TGG | - | chr8_1:1144183-1144202 | Msa1171510:intron | 45.0% | |
| GTAGAACTCGGCAAGACTAA+CGG | - | chr8_1:1144584-1144603 | Msa1171510:intron | 45.0% | |
| GCACAGAGAAAGCTATTGAG+TGG | - | chr8_1:1144634-1144653 | Msa1171510:intron | 45.0% | |
| CTATTGAGTGGGATGCTTCT+TGG | - | chr8_1:1144646-1144665 | Msa1171510:intron | 45.0% | |
| TCAAGCAACCTTGATCCATC+TGG | - | chr8_1:1144669-1144688 | Msa1171510:intron | 45.0% | |
| !!! | CTTCTCTGGCTCTACAGTTT+TGG | + | chr8_1:1144751-1144770 | None:intergenic | 45.0% |
| !!! | TTAATTTTATTTTATTTTTG+TGG | - | chr8_1:1143386-1143405 | Msa1171510:CDS | 5.0% |
| ATTGCCTGCGAGAAAGCTCA+AGG | + | chr8_1:1140223-1140242 | None:intergenic | 50.0% | |
| GGTTTACAAGCTCATGGGAG+TGG | - | chr8_1:1140415-1140434 | Msa1171510:CDS | 50.0% | |
| GAGTACACAACTACACCCTC+CGG | - | chr8_1:1140954-1140973 | Msa1171510:intron | 50.0% | |
| !! | TGTCACAGATTGAAGCACCG+TGG | - | chr8_1:1141433-1141452 | Msa1171510:intron | 50.0% |
| GCCATTGTTGATCCTGCTTC+TGG | - | chr8_1:1141514-1141533 | Msa1171510:CDS | 50.0% | |
| ! | AGAGGTTGATCACCAGAAGC+AGG | + | chr8_1:1141529-1141548 | None:intergenic | 50.0% |
| CACACCTGGTTAGTATGTCG+CGG | - | chr8_1:1141774-1141793 | Msa1171510:intron | 50.0% | |
| TAGACCGCGACATACTAACC+AGG | + | chr8_1:1141781-1141800 | None:intergenic | 50.0% | |
| GTATGTCGCGGTCTAGATTG+CGG | - | chr8_1:1141786-1141805 | Msa1171510:intron | 50.0% | |
| CTCGAGTACAAATGACCAGG+TGG | + | chr8_1:1142189-1142208 | None:intergenic | 50.0% | |
| AAGACCGGGAGTTTCGTAGA+TGG | - | chr8_1:1142211-1142230 | Msa1171510:intron | 50.0% | |
| GTTACTGCTAGATACCTGGC+CGG | - | chr8_1:1142523-1142542 | Msa1171510:CDS | 50.0% | |
| TTAGGGTGCACCTGACCTTA+AGG | - | chr8_1:1142727-1142746 | Msa1171510:intron | 50.0% | |
| TCTCTTCCAGCCTTAAGGTC+AGG | + | chr8_1:1142740-1142759 | None:intergenic | 50.0% | |
| TCACCAAGAAACATGCCGCA+AGG | - | chr8_1:1143618-1143637 | Msa1171510:CDS | 50.0% | |
| ! | GTGATGGAGTTGGCTATGGT+TGG | - | chr8_1:1144175-1144194 | Msa1171510:intron | 50.0% |
| ! | CTTTGAGAGGTCTTTCCCTC+AGG | - | chr8_1:1144410-1144429 | Msa1171510:intron | 50.0% |
| CTGCTCTTCCAGATGGATCA+AGG | + | chr8_1:1144680-1144699 | None:intergenic | 50.0% | |
| CCAAATGCTGCTCTTCCAGA+TGG | + | chr8_1:1144687-1144706 | None:intergenic | 50.0% | |
| CCATCTGGAAGAGCAGCATT+TGG | - | chr8_1:1144684-1144703 | Msa1171510:intron | 50.0% | |
| GCATCCTTGAGCTTTCTCGC+AGG | - | chr8_1:1140216-1140235 | Msa1171510:three_prime_UTR | 55.0% | |
| !! | AGGTGTTGCTGCCCTGATTG+TGG | + | chr8_1:1143476-1143495 | None:intergenic | 55.0% |
| TCGGCAAGACTAACGGTTCC+TGG | - | chr8_1:1144591-1144610 | Msa1171510:intron | 55.0% | |
| GCAAGACTAACGGTTCCTGG+AGG | - | chr8_1:1144594-1144613 | Msa1171510:intron | 55.0% | |
| CATGCAACACTAGCTCCTCC+AGG | + | chr8_1:1144612-1144631 | None:intergenic | 55.0% | |
| !! | TGAAGCACCGTGGTCCAGAC+TGG | - | chr8_1:1141443-1141462 | Msa1171510:intron | 60.0% |
| ACCGTGGTCCAGACTGGAGT+GGG | - | chr8_1:1141449-1141468 | Msa1171510:intron | 60.0% | |
| ! | TGGAGTGGGCTCCACCAACA+TGG | - | chr8_1:1141463-1141482 | Msa1171510:intron | 60.0% |
| !! | TAGCAGCTTTTGTGCCGGCC+AGG | + | chr8_1:1142540-1142559 | None:intergenic | 60.0% |
| GGTGCACCTGACCTTAAGGC+TGG | - | chr8_1:1142731-1142750 | Msa1171510:intron | 60.0% | |
| CACCGTGGTCCAGACTGGAG+TGG | - | chr8_1:1141448-1141467 | Msa1171510:intron | 65.0% | |
| GCCCACTCCAGTCTGGACCA+CGG | + | chr8_1:1141453-1141472 | None:intergenic | 65.0% | |
| TGGTGGAGCCCACTCCAGTC+TGG | + | chr8_1:1141460-1141479 | None:intergenic | 65.0% | |
| CGGTCTAGATTGCGGTCGCG+CGG | - | chr8_1:1141794-1141813 | Msa1171510:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 1140012 | 1145101 | 1140012 | ID=Msa1171510;Name=Msa1171510 |
| chr8_1 | mRNA | 1140012 | 1145101 | 1140012 | ID=Msa1171510-mRNA-1;Parent=Msa1171510;Name=Msa1171510-mRNA-1;_AED=0.08;_eAED=0.08;_QI=146|1|1|1|1|1|13|280|586 |
| chr8_1 | exon | 1140012 | 1140525 | 1140012 | ID=Msa1171510-mRNA-1:exon:401;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1140682 | 1140789 | 1140682 | ID=Msa1171510-mRNA-1:exon:400;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1140883 | 1140969 | 1140883 | ID=Msa1171510-mRNA-1:exon:399;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1141064 | 1141144 | 1141064 | ID=Msa1171510-mRNA-1:exon:398;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1141234 | 1141368 | 1141234 | ID=Msa1171510-mRNA-1:exon:397;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1141474 | 1141695 | 1141474 | ID=Msa1171510-mRNA-1:exon:396;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1142302 | 1142382 | 1142302 | ID=Msa1171510-mRNA-1:exon:395;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1142510 | 1142671 | 1142510 | ID=Msa1171510-mRNA-1:exon:394;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1142799 | 1142992 | 1142799 | ID=Msa1171510-mRNA-1:exon:393;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1143086 | 1143227 | 1143086 | ID=Msa1171510-mRNA-1:exon:392;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1143332 | 1143427 | 1143332 | ID=Msa1171510-mRNA-1:exon:391;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1143534 | 1143672 | 1143534 | ID=Msa1171510-mRNA-1:exon:390;Parent=Msa1171510-mRNA-1 |
| chr8_1 | exon | 1144876 | 1145101 | 1144876 | ID=Msa1171510-mRNA-1:exon:389;Parent=Msa1171510-mRNA-1 |
| chr8_1 | five_prime_UTR | 1144956 | 1145101 | 1144956 | ID=Msa1171510-mRNA-1:five_prime_utr;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1144876 | 1144955 | 1144876 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1143534 | 1143672 | 1143534 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1143332 | 1143427 | 1143332 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1143086 | 1143227 | 1143086 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1142799 | 1142992 | 1142799 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1142510 | 1142671 | 1142510 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1142302 | 1142382 | 1142302 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1141474 | 1141695 | 1141474 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1141234 | 1141368 | 1141234 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1141064 | 1141144 | 1141064 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1140883 | 1140969 | 1140883 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1140682 | 1140789 | 1140682 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | CDS | 1140292 | 1140525 | 1140292 | ID=Msa1171510-mRNA-1:cds;Parent=Msa1171510-mRNA-1 |
| chr8_1 | three_prime_UTR | 1140012 | 1140291 | 1140012 | ID=Msa1171510-mRNA-1:three_prime_utr;Parent=Msa1171510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
