Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0093740 | sp|P19251|ASNS1_PEA | 95.051 | 586 | 29 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0093740 | A0A072UXM4 | 99.829 | 586 | 1 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1221 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0093740 | -0.808168 | 3.536627e-50 | -8.615850e-47 |
| Msa0011920 | Msa0093740 | -0.834797 | 2.434947e-56 | -8.615850e-47 |
| Msa0030050 | Msa0093740 | 0.819693 | 1.015625e-52 | -8.615850e-47 |
| Msa0036560 | Msa0093740 | -0.812674 | 3.764017e-51 | -8.615850e-47 |
| Msa0037180 | Msa0093740 | 0.824085 | 9.773042e-54 | -8.615850e-47 |
| Msa0037280 | Msa0093740 | 0.813356 | 2.668373e-51 | -8.615850e-47 |
| Msa0037650 | Msa0093740 | -0.830064 | 3.625058e-55 | -8.615850e-47 |
| Msa0037720 | Msa0093740 | 0.861088 | 1.311241e-63 | -8.615850e-47 |
| Msa0039890 | Msa0093740 | 0.801220 | 9.980254e-49 | -8.615850e-47 |
| Msa0076640 | Msa0093740 | 0.827012 | 1.979250e-54 | -8.615850e-47 |
| Msa0081700 | Msa0093740 | -0.825234 | 5.238251e-54 | -8.615850e-47 |
| Msa0083240 | Msa0093740 | 0.850725 | 1.409992e-60 | -8.615850e-47 |
| Msa0087550 | Msa0093740 | 0.813275 | 2.778874e-51 | -8.615850e-47 |
| Msa0092220 | Msa0093740 | 0.830313 | 3.150862e-55 | -8.615850e-47 |
| Msa0093740 | Msa0099350 | -0.813473 | 2.514825e-51 | -8.615850e-47 |
| Msa0093740 | Msa0099430 | -0.814652 | 1.381626e-51 | -8.615850e-47 |
| Msa0093740 | Msa0127910 | -0.818583 | 1.817425e-52 | -8.615850e-47 |
| Msa0093740 | Msa0129640 | 0.818925 | 1.519849e-52 | -8.615850e-47 |
| Msa0093740 | Msa0134270 | 0.810054 | 1.394469e-50 | -8.615850e-47 |
| Msa0093740 | Msa0139280 | -0.805686 | 1.183967e-49 | -8.615850e-47 |
| Msa0093740 | Msa0148000 | -0.816974 | 4.192409e-52 | -8.615850e-47 |
| Msa0093740 | Msa0174060 | -0.826653 | 2.411098e-54 | -8.615850e-47 |
| Msa0093740 | Msa0177320 | 0.812445 | 4.224492e-51 | -8.615850e-47 |
| Msa0093740 | Msa0223590 | 0.822304 | 2.545205e-53 | -8.615850e-47 |
| Msa0093740 | Msa0224210 | 0.808471 | 3.046616e-50 | -8.615850e-47 |
| Msa0093740 | Msa0225070 | -0.814371 | 1.594157e-51 | -8.615850e-47 |
| Msa0093740 | Msa0236690 | -0.807024 | 6.185860e-50 | -8.615850e-47 |
| Msa0093740 | Msa0246020 | 0.801758 | 7.741768e-49 | -8.615850e-47 |
| Msa0093740 | Msa0264890 | 0.807200 | 5.677575e-50 | -8.615850e-47 |
| Msa0093740 | Msa0285420 | 0.839375 | 1.645184e-57 | -8.615850e-47 |
| Msa0093740 | Msa0304350 | -0.802550 | 5.319310e-49 | -8.615850e-47 |
| Msa0093740 | Msa0305910 | -0.801740 | 7.808896e-49 | -8.615850e-47 |
| Msa0093740 | Msa0324220 | 0.836512 | 8.957949e-57 | -8.615850e-47 |
| Msa0093740 | Msa0340270 | 0.831002 | 2.136517e-55 | -8.615850e-47 |
| Msa0093740 | Msa0340830 | -0.801920 | 7.169142e-49 | -8.615850e-47 |
| Msa0093740 | Msa0381470 | 0.849468 | 3.171761e-60 | -8.615850e-47 |
| Msa0093740 | Msa0386890 | 0.813808 | 2.121737e-51 | -8.615850e-47 |
| Msa0093740 | Msa0390590 | -0.818427 | 1.971801e-52 | -8.615850e-47 |
| Msa0093740 | Msa0390790 | 0.807171 | 5.758765e-50 | -8.615850e-47 |
| Msa0093740 | Msa0413130 | 0.985798 | 1.059892e-164 | -8.615850e-47 |
| Msa0093740 | Msa0458220 | 0.953185 | 4.784185e-111 | -8.615850e-47 |
| Msa0093740 | Msa0470920 | 0.806722 | 7.166440e-50 | -8.615850e-47 |
| Msa0093740 | Msa0476070 | 0.803507 | 3.372917e-49 | -8.615850e-47 |
| Msa0093740 | Msa0480530 | 0.809162 | 2.168273e-50 | -8.615850e-47 |
| Msa0093740 | Msa0481100 | 0.801502 | 8.735566e-49 | -8.615850e-47 |
| Msa0093740 | Msa0504700 | 0.936237 | 2.393002e-97 | -8.615850e-47 |
| Msa0093740 | Msa0519910 | 0.846049 | 2.771637e-59 | -8.615850e-47 |
| Msa0093740 | Msa0524370 | 0.802931 | 4.439533e-49 | -8.615850e-47 |
| Msa0093740 | Msa0537210 | 0.802855 | 4.601453e-49 | -8.615850e-47 |
| Msa0093740 | Msa0538050 | -0.833827 | 4.263845e-56 | -8.615850e-47 |
| Msa0093740 | Msa0560280 | 0.806629 | 7.495371e-50 | -8.615850e-47 |
| Msa0093740 | Msa0563230 | -0.809481 | 1.852059e-50 | -8.615850e-47 |
| Msa0093740 | Msa0563440 | 0.809281 | 2.044667e-50 | -8.615850e-47 |
| Msa0093740 | Msa0566930 | 0.807705 | 4.435149e-50 | -8.615850e-47 |
| Msa0093740 | Msa0572730 | -0.805506 | 1.291623e-49 | -8.615850e-47 |
| Msa0093740 | Msa0593600 | 0.821511 | 3.883924e-53 | -8.615850e-47 |
| Msa0093740 | Msa0614290 | 0.814895 | 1.220379e-51 | -8.615850e-47 |
| Msa0093740 | Msa0617470 | -0.817467 | 3.248601e-52 | -8.615850e-47 |
| Msa0093740 | Msa0621670 | -0.821122 | 4.775138e-53 | -8.615850e-47 |
| Msa0093740 | Msa0622590 | 0.803083 | 4.129033e-49 | -8.615850e-47 |
| Msa0093740 | Msa0625900 | -0.801133 | 1.039556e-48 | -8.615850e-47 |
| Msa0093740 | Msa0638820 | 0.809415 | 1.913650e-50 | -8.615850e-47 |
| Msa0093740 | Msa0639530 | -0.806039 | 9.982024e-50 | -8.615850e-47 |
| Msa0093740 | Msa0672980 | 0.804172 | 2.454555e-49 | -8.615850e-47 |
| Msa0093740 | Msa0697510 | 0.814710 | 1.341433e-51 | -8.615850e-47 |
| Msa0093740 | Msa0697520 | 0.814755 | 1.310622e-51 | -8.615850e-47 |
| Msa0093740 | Msa0700250 | -0.813718 | 2.220595e-51 | -8.615850e-47 |
| Msa0093740 | Msa0744540 | 0.808559 | 2.917961e-50 | -8.615850e-47 |
| Msa0093740 | Msa0781800 | 0.800569 | 1.355403e-48 | -8.615850e-47 |
| Msa0093740 | Msa0826370 | 0.807757 | 4.325331e-50 | -8.615850e-47 |
| Msa0093740 | Msa0826380 | 0.817159 | 3.809613e-52 | -8.615850e-47 |
| Msa0093740 | Msa0826450 | 0.815803 | 7.665298e-52 | -8.615850e-47 |
| Msa0093740 | Msa0828350 | 0.808076 | 3.698718e-50 | -8.615850e-47 |
| Msa0093740 | Msa0865810 | 0.800865 | 1.179437e-48 | -8.615850e-47 |
| Msa0093740 | Msa0898090 | -0.809470 | 1.862797e-50 | -8.615850e-47 |
| Msa0093740 | Msa0906680 | 0.800958 | 1.129089e-48 | -8.615850e-47 |
| Msa0093740 | Msa0913520 | 0.807531 | 4.828992e-50 | -8.615850e-47 |
| Msa0093740 | Msa0924690 | -0.845541 | 3.809414e-59 | -8.615850e-47 |
| Msa0093740 | Msa0931550 | -0.836031 | 1.187208e-56 | -8.615850e-47 |
| Msa0093740 | Msa0963800 | -0.845092 | 5.038107e-59 | -8.615850e-47 |
| Msa0093740 | Msa0967900 | -0.805501 | 1.294611e-49 | -8.615850e-47 |
| Msa0093740 | Msa1088000 | -0.802410 | 5.683982e-49 | -8.615850e-47 |
| Msa0093740 | Msa1157200 | 0.836999 | 6.730232e-57 | -8.615850e-47 |
| Msa0093740 | Msa1171510 | 0.983862 | 6.442391e-159 | -8.615850e-47 |
| Msa0093740 | Msa1202470 | 0.825374 | 4.853159e-54 | -8.615850e-47 |
| Msa0093740 | Msa1202710 | -0.806620 | 7.530977e-50 | -8.615850e-47 |
| Msa0093740 | Msa1208530 | 0.810236 | 1.274454e-50 | -8.615850e-47 |
| Msa0093740 | Msa1217950 | 0.801108 | 1.051961e-48 | -8.615850e-47 |
| Msa0093740 | Msa1254910 | 0.803961 | 2.715338e-49 | -8.615850e-47 |
| Msa0093740 | Msa1276400 | 0.827419 | 1.581367e-54 | -8.615850e-47 |
| Msa0093740 | Msa1299220 | 0.810577 | 1.075581e-50 | -8.615850e-47 |
| Msa0093740 | Msa1304790 | 0.801408 | 9.133699e-49 | -8.615850e-47 |
| Msa0093740 | Msa1326180 | 0.813290 | 2.758281e-51 | -8.615850e-47 |
| Msa0093740 | Msa1344930 | 0.803454 | 3.458928e-49 | -8.615850e-47 |
| Msa0093740 | Msa1348860 | -0.810139 | 1.336983e-50 | -8.615850e-47 |
| Msa0093740 | Msa1361040 | 0.820316 | 7.316611e-53 | -8.615850e-47 |
| Msa0093740 | Msa1368400 | 0.813447 | 2.547534e-51 | -8.615850e-47 |
| Msa0093740 | Msa1372470 | -0.801350 | 9.386702e-49 | -8.615850e-47 |
| Msa0093740 | Msa1375640 | 0.801253 | 9.825789e-49 | -8.615850e-47 |
| Msa0093740 | Msa1377980 | -0.813535 | 2.437454e-51 | -8.615850e-47 |
| Msa0093740 | Msa1382100 | -0.803078 | 4.138952e-49 | -8.615850e-47 |
| Msa0093740 | Msa1384410 | -0.820031 | 8.500727e-53 | -8.615850e-47 |
| Msa0093740 | Msa1398450 | -0.816513 | 5.319203e-52 | -8.615850e-47 |
| Msa0093740 | Msa1401550 | 0.821627 | 3.651134e-53 | -8.615850e-47 |
| Msa0093740 | Msa1408280 | -0.811066 | 8.431240e-51 | -8.615850e-47 |
| Msa0093740 | Msa1412410 | 0.810484 | 1.126754e-50 | -8.615850e-47 |
| Msa0093740 | Msa1427860 | 0.817058 | 4.014818e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0093740 | MtrunA17_Chr3g0105311 | 99.829 | 586 | 1 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1221 |
| Msa0093740 | MtrunA17_Chr5g0430381 | 86.007 | 586 | 80 | 2 | 1 | 586 | 1 | 584 | 0.0 | 1056 |
| Msa0093740 | MtrunA17_Chr3g0123991 | 75.714 | 560 | 135 | 1 | 1 | 560 | 1 | 559 | 0.0 | 915 |
| Msa0093740 | MtrunA17_Chr5g0429171 | 72.727 | 77 | 20 | 1 | 510 | 586 | 30 | 105 | 6.66e-28 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0093740 | AT3G47340.1 | 81.942 | 587 | 102 | 3 | 1 | 586 | 1 | 584 | 0.0 | 1021 |
| Msa0093740 | AT5G10240.1 | 78.919 | 555 | 116 | 1 | 1 | 555 | 1 | 554 | 0.0 | 945 |
| Msa0093740 | AT5G65010.1 | 78.403 | 551 | 118 | 1 | 1 | 551 | 1 | 550 | 0.0 | 936 |
| Msa0093740 | AT5G10240.2 | 78.378 | 555 | 118 | 2 | 1 | 555 | 1 | 553 | 0.0 | 934 |
| Msa0093740 | AT5G65010.2 | 78.442 | 552 | 117 | 2 | 1 | 551 | 1 | 551 | 0.0 | 933 |
| Msa0093740 | AT3G47340.2 | 84.479 | 509 | 78 | 1 | 1 | 509 | 1 | 508 | 0.0 | 925 |
| Msa0093740 | AT3G47340.3 | 84.450 | 418 | 64 | 1 | 1 | 418 | 1 | 417 | 0.0 | 766 |
| Msa0093740 | AT3G47340.4 | 83.828 | 303 | 48 | 1 | 116 | 418 | 1 | 302 | 0.0 | 550 |
Find 145 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACACTATCATATTGTAATT+TGG | 0.171106 | 1_2:+76653660 | Msa0093740:three_prime_UTR |
| CTTCTTTGTTTGGTGCCTTA+TGG | 0.206839 | 1_2:-76652222 | None:intergenic |
| TGAATTTCAGTTTACTATTC+AGG | 0.209606 | 1_2:+76651421 | Msa0093740:CDS |
| AATAATATTCTGGCTTTATT+AGG | 0.218404 | 1_2:-76653478 | None:intergenic |
| TGGATTGCATCAGAATTAAA+AGG | 0.220309 | 1_2:+76650760 | Msa0093740:CDS |
| GGAGTCAAATGGGTGATTTC+TGG | 0.221522 | 1_2:+76652160 | Msa0093740:CDS |
| CAAAGACAATAGTTTCTATA+AGG | 0.244961 | 1_2:-76648720 | None:intergenic |
| TCTATAGTAATATGCTTCTT+TGG | 0.249070 | 1_2:-76653013 | None:intergenic |
| AGATTAGAAATTTCCATCTT+TGG | 0.261394 | 1_2:-76653408 | None:intergenic |
| CTTCTCTGGCTCTACAGTTT+TGG | 0.272062 | 1_2:-76653379 | None:intergenic |
| GCCATTGTTGATCCTGCTTC+TGG | 0.280821 | 1_2:+76650145 | Msa0093740:CDS |
| CCAACATGGTGATAACTATT+TGG | 0.283627 | 1_2:+76650108 | Msa0093740:CDS |
| TTACCTTGCGGCATGTTTCT+TGG | 0.286349 | 1_2:-76652252 | None:intergenic |
| TGGTTGGATTGATGGTATTA+AGG | 0.289578 | 1_2:+76652822 | Msa0093740:CDS |
| CTATTGAGTGGGATGCTTCT+TGG | 0.291336 | 1_2:+76653277 | Msa0093740:CDS |
| AAGATGGAAATTTCTAATCT+TGG | 0.303255 | 1_2:+76653411 | Msa0093740:CDS |
| CACTTCCTTGTACATTGGTT+GGG | 0.316283 | 1_2:+76650627 | Msa0093740:CDS |
| GATTACAGGCTGTGATAAAA+AGG | 0.326265 | 1_2:+76651065 | Msa0093740:intron |
| TGTTGTTAGTATGAAGAGTA+TGG | 0.328585 | 1_2:+76650508 | Msa0093740:intron |
| TGGTGAAACTCTTCTTTGTT+TGG | 0.329318 | 1_2:-76652232 | None:intergenic |
| TGGAGGTTTGGATTCTTCAT+TGG | 0.339121 | 1_2:+76651123 | Msa0093740:CDS |
| AAAATGCTATGTTATGTATA+AGG | 0.341275 | 1_2:+76653564 | Msa0093740:three_prime_UTR |
| CTACTTCTCTTCCAGCCTTA+AGG | 0.348738 | 1_2:-76651373 | None:intergenic |
| CTCATTCTGTGTAGGGCTTA+AGG | 0.348833 | 1_2:+76651213 | Msa0093740:CDS |
| TATGTAGTATAATAATATTC+TGG | 0.351740 | 1_2:-76653488 | None:intergenic |
| TCGGCAAGACTAACGGTTCC+TGG | 0.359524 | 1_2:+76653222 | Msa0093740:CDS |
| ATCTTTGGTATAATCTTCTC+TGG | 0.371278 | 1_2:-76653393 | None:intergenic |
| CATTGATCCCGAGTACAAAA+TGG | 0.371781 | 1_2:+76652489 | Msa0093740:CDS |
| TTGTTATTGTAGGTTCTGTT+TGG | 0.373539 | 1_2:+76650740 | Msa0093740:intron |
| GTTGGCTATGGTTGGATTGA+TGG | 0.373548 | 1_2:+76652814 | Msa0093740:CDS |
| TATCATAAAATTCAGGTGAA+TGG | 0.381079 | 1_2:+76650302 | Msa0093740:intron |
| AAAGACAATAGTTTCTATAA+GGG | 0.381439 | 1_2:-76648719 | None:intergenic |
| CACAAAAGCTGCTAAGCAAT+GGG | 0.383437 | 1_2:+76651177 | Msa0093740:CDS |
| TACATTGGTTGGGGACTAGA+TGG | 0.386232 | 1_2:+76650637 | Msa0093740:CDS |
| CTCAAAACTAGAGGATCATA+AGG | 0.390752 | 1_2:-76650907 | None:intergenic |
| TCACTTCCTTGTACATTGGT+TGG | 0.403117 | 1_2:+76650626 | Msa0093740:CDS |
| TGTGTACGGAATTTGTGATT+AGG | 0.411870 | 1_2:-76650362 | None:intergenic |
| CATATGATGTAACCACAATC+AGG | 0.412177 | 1_2:+76652092 | Msa0093740:CDS |
| TCAAATCATCAGGAGTCAAA+TGG | 0.416775 | 1_2:+76652149 | Msa0093740:CDS |
| TTAGGGTGCACCTGACCTTA+AGG | 0.420678 | 1_2:+76651358 | Msa0093740:intron |
| TGGTGGAGCCCACTCCAGTC+TGG | 0.424835 | 1_2:-76650088 | None:intergenic |
| CCATCTGGAAGAGCAGCATT+TGG | 0.431726 | 1_2:+76653315 | Msa0093740:CDS |
| AGAGAAGATTATACCAAAGA+TGG | 0.434916 | 1_2:+76653395 | Msa0093740:CDS |
| CTTTGAGAGGTCTTTCCCTC+AGG | 0.440586 | 1_2:+76653041 | Msa0093740:CDS |
| GCCTTGATAAAATACACAAC+AGG | 0.442959 | 1_2:-76653541 | None:intergenic |
| AGGGTATTTGTATTTCCATA+AGG | 0.443024 | 1_2:+76652207 | Msa0093740:CDS |
| AGAGGATCATAAGGGGTTGT+TGG | 0.444662 | 1_2:-76650898 | None:intergenic |
| GGTGTCACTTCCTTGTACAT+TGG | 0.452637 | 1_2:+76650622 | Msa0093740:CDS |
| TGTGGTATACTTGCTGTACT+TGG | 0.453089 | 1_2:+76648755 | Msa0093740:CDS |
| GAATCGAGAAATGGATACTA+AGG | 0.458386 | 1_2:+76652619 | Msa0093740:CDS |
| TCAAAACTAGAGGATCATAA+GGG | 0.460214 | 1_2:-76650906 | None:intergenic |
| TGTCTCATATTAGCTTTGAA+TGG | 0.461591 | 1_2:-76653439 | None:intergenic |
| TCAAGCAACCTTGATCCATC+TGG | 0.462431 | 1_2:+76653300 | Msa0093740:CDS |
| TAGAGTACCTTAGGCAGATA+AGG | 0.471099 | 1_2:-76652666 | None:intergenic |
| AAGAAGGAAGAATCGAGAAA+TGG | 0.471711 | 1_2:+76652610 | Msa0093740:CDS |
| TCTCTTCCAGCCTTAAGGTC+AGG | 0.474929 | 1_2:-76651368 | None:intergenic |
| ACTTCCTTGTACATTGGTTG+GGG | 0.475172 | 1_2:+76650628 | Msa0093740:CDS |
| TAATATGCTTCTTTGGTAAG+TGG | 0.476674 | 1_2:-76653006 | None:intergenic |
| TCTCGAAAGATCAAATCATC+AGG | 0.483191 | 1_2:+76652139 | Msa0093740:CDS |
| TGAAGCACCGTGGTCCAGAC+TGG | 0.485903 | 1_2:+76650074 | Msa0093740:CDS |
| CTGTGATGTTATTGCACACC+TGG | 0.486927 | 1_2:+76650391 | Msa0093740:CDS |
| TTTCAGATAAAACATGAAGA+AGG | 0.488675 | 1_2:+76652594 | Msa0093740:intron |
| TTATGTTAAATTTGAATGCA+AGG | 0.489283 | 1_2:+76653706 | Msa0093740:three_prime_UTR |
| TGCAGATCAAAGCTCTTCAT+AGG | 0.490172 | 1_2:+76652371 | Msa0093740:intron |
| AAATTACACTCATTCTGTGT+AGG | 0.494980 | 1_2:+76651205 | Msa0093740:CDS |
| CAAATCATCAGGAGTCAAAT+GGG | 0.497991 | 1_2:+76652150 | Msa0093740:CDS |
| GCACAAAAGCTGCTAAGCAA+TGG | 0.498472 | 1_2:+76651176 | Msa0093740:CDS |
| CAACAGTTTCATTGTTGCAA+GGG | 0.499051 | 1_2:+76650591 | Msa0093740:CDS |
| ATTGTTGCAAGGGATGCTAT+AGG | 0.499242 | 1_2:+76650601 | Msa0093740:CDS |
| AAATAAATCAACATATGCAT+GGG | 0.500130 | 1_2:+76652411 | Msa0093740:CDS |
| TTGGTAAGTGGAGTGTTGAA+AGG | 0.504831 | 1_2:-76652994 | None:intergenic |
| CTGCTCTTCCAGATGGATCA+AGG | 0.507380 | 1_2:-76653308 | None:intergenic |
| TTTGAGTCTTGCCTTCTCAA+AGG | 0.510674 | 1_2:-76650935 | None:intergenic |
| CCAAATGCTGCTCTTCCAGA+TGG | 0.513203 | 1_2:-76653315 | None:intergenic |
| AAGACCGGGAGTTTCGTAGA+TGG | 0.513657 | 1_2:+76650842 | Msa0093740:CDS |
| GGATTGCATCAGAATTAAAA+GGG | 0.514030 | 1_2:+76650761 | Msa0093740:CDS |
| GTGATGGAGTTGGCTATGGT+TGG | 0.516816 | 1_2:+76652806 | Msa0093740:CDS |
| CTGATGACTCACAAGCTAAG+AGG | 0.518775 | 1_2:+76648783 | Msa0093740:CDS |
| TCTACAATCATGAAGACCTC+AGG | 0.520006 | 1_2:+76650330 | Msa0093740:CDS |
| ATTTGTACTCGAGCAAAGAC+CGG | 0.520883 | 1_2:+76650827 | Msa0093740:CDS |
| TTCAGTGATGGAGTTGGCTA+TGG | 0.523214 | 1_2:+76652802 | Msa0093740:CDS |
| CAAATAAATCAACATATGCA+TGG | 0.524556 | 1_2:+76652410 | Msa0093740:CDS |
| AATTACACTCATTCTGTGTA+GGG | 0.525633 | 1_2:+76651206 | Msa0093740:CDS |
| AGAGGTTGATCACCAGAAGC+AGG | 0.531123 | 1_2:-76650157 | None:intergenic |
| ATAACTATTTGGCTCATCAA+AGG | 0.533219 | 1_2:+76650119 | Msa0093740:CDS |
| GGTGCACCTGACCTTAAGGC+TGG | 0.541650 | 1_2:+76651362 | Msa0093740:CDS |
| AGAAAATCCTTATCTGCCTA+AGG | 0.542451 | 1_2:+76652659 | Msa0093740:CDS |
| TTTAAAAGAAAGACTAGATG+TGG | 0.542999 | 1_2:-76653621 | None:intergenic |
| TAGTAAACTGAAATTCATGA+TGG | 0.544517 | 1_2:-76651415 | None:intergenic |
| AATAGTTATCACCATGTTGG+TGG | 0.545301 | 1_2:-76650105 | None:intergenic |
| AAATGGGTGATTTCTGGAGA+AGG | 0.550290 | 1_2:+76652166 | Msa0093740:CDS |
| ACCGTGGTCCAGACTGGAGT+GGG | 0.551709 | 1_2:+76650080 | Msa0093740:CDS |
| TTTGTACTCGAGCAAAGACC+GGG | 0.553206 | 1_2:+76650828 | Msa0093740:CDS |
| CAGAAGGAACAGTTCAGTGA+TGG | 0.554559 | 1_2:+76652790 | Msa0093740:CDS |
| AGGTGTTGCTGCCCTGATTG+TGG | 0.554777 | 1_2:-76652104 | None:intergenic |
| ACAACAGTTTCATTGTTGCA+AGG | 0.557383 | 1_2:+76650590 | Msa0093740:CDS |
| ATTGGATAAAATGTGAAGAG+AGG | 0.559792 | 1_2:-76648665 | None:intergenic |
| TTTGAGGAATGCCTTTGAGA+AGG | 0.562136 | 1_2:+76650924 | Msa0093740:CDS |
| GGATTTCATAAAAGTTGCAA+TGG | 0.566188 | 1_2:+76652465 | Msa0093740:CDS |
| TTTCGAGACATCAGAAACAT+AGG | 0.569570 | 1_2:-76652124 | None:intergenic |
| GCATCCTTGAGCTTTCTCGC+AGG | 0.571788 | 1_2:+76648810 | Msa0093740:CDS |
| CATCACAGTCACATTGTGTA+CGG | 0.573999 | 1_2:-76650376 | None:intergenic |
| TGATGACTCACAAGCTAAGA+GGG | 0.575223 | 1_2:+76648784 | Msa0093740:CDS |
| AGCAGTTACTGCTAGATACC+TGG | 0.575470 | 1_2:+76651150 | Msa0093740:CDS |
| GTAGAACTCGGCAAGACTAA+CGG | 0.589213 | 1_2:+76653215 | Msa0093740:intron |
| CATGCAACACTAGCTCCTCC+AGG | 0.589828 | 1_2:-76653240 | None:intergenic |
| GAACAGTTCAGTGATGGAGT+TGG | 0.592459 | 1_2:+76652796 | Msa0093740:CDS |
| CGAGAAATGGATACTAAGGA+AGG | 0.594712 | 1_2:+76652623 | Msa0093740:CDS |
| TATAGTCAATAATTGCATAG+AGG | 0.594968 | 1_2:+76653509 | Msa0093740:three_prime_UTR |
| TTGATGACTGATGTGCCGTT+CGG | 0.596910 | 1_2:+76651088 | Msa0093740:CDS |
| ACTATAGAATGATCTTTGAG+AGG | 0.598679 | 1_2:+76653028 | Msa0093740:CDS |
| AAAACAAGGTGCAAAGAGTG+TGG | 0.599956 | 1_2:-76648616 | None:intergenic |
| CCAAATAGTTATCACCATGT+TGG | 0.601085 | 1_2:-76650108 | None:intergenic |
| GGATGGCATAGATGCAATTG+AGG | 0.606055 | 1_2:+76652048 | Msa0093740:intron |
| ATTGCCTGCGAGAAAGCTCA+AGG | 0.606762 | 1_2:-76648814 | None:intergenic |
| GTAGATGGTACAATCCTCCA+TGG | 0.607175 | 1_2:+76650857 | Msa0093740:CDS |
| TAGTCCCCAACCAATGTACA+AGG | 0.608478 | 1_2:-76650632 | None:intergenic |
| CACAGAGAAAGCTATTGAGT+GGG | 0.608617 | 1_2:+76653266 | Msa0093740:CDS |
| GCACAGAGAAAGCTATTGAG+TGG | 0.609213 | 1_2:+76653265 | Msa0093740:CDS |
| GATTTGTCTTCATTGAAGAG+AGG | 0.610358 | 1_2:-76650175 | None:intergenic |
| CACCGTGGTCCAGACTGGAG+TGG | 0.611314 | 1_2:+76650079 | Msa0093740:CDS |
| AGACAAATCTATTATTGTCA+CGG | 0.614131 | 1_2:+76650189 | Msa0093740:CDS |
| TGTACCATCTACGAAACTCC+CGG | 0.614554 | 1_2:-76650846 | None:intergenic |
| GATTAGGCAATTGTTTCCTG+AGG | 0.616657 | 1_2:-76650346 | None:intergenic |
| AAGGCATTCCTCAAAACTAG+AGG | 0.619679 | 1_2:-76650916 | None:intergenic |
| AGCTAATATGAGACATGGCA+AGG | 0.619874 | 1_2:+76653447 | Msa0093740:exon |
| ATATGATGTAACCACAATCA+GGG | 0.627367 | 1_2:+76652093 | Msa0093740:CDS |
| GCCCACTCCAGTCTGGACCA+CGG | 0.634064 | 1_2:-76650081 | None:intergenic |
| TTCAAAGCTAATATGAGACA+TGG | 0.641602 | 1_2:+76653442 | Msa0093740:exon |
| TGGAGTGGGCTCCACCAACA+TGG | 0.641715 | 1_2:+76650094 | Msa0093740:CDS |
| CCAGATAGTAAAACACCGAA+CGG | 0.643802 | 1_2:-76651103 | None:intergenic |
| TTGCTCGAGTACAAATGACC+AGG | 0.644299 | 1_2:-76650820 | None:intergenic |
| ATAATTGCCTCATTGAACCA+TGG | 0.655833 | 1_2:-76650874 | None:intergenic |
| TCACCAAGAAACATGCCGCA+AGG | 0.655836 | 1_2:+76652249 | Msa0093740:CDS |
| CAAAACTAGAGGATCATAAG+GGG | 0.656036 | 1_2:-76650905 | None:intergenic |
| AATAAATCAACATATGCATG+GGG | 0.661879 | 1_2:+76652412 | Msa0093740:CDS |
| CAATCCTCCATGGTTCAATG+AGG | 0.663563 | 1_2:+76650867 | Msa0093740:CDS |
| ACCAGAAGCAGGATCAACAA+TGG | 0.667593 | 1_2:-76650146 | None:intergenic |
| CTCGAGTACAAATGACCAGG+TGG | 0.689124 | 1_2:-76650817 | None:intergenic |
| ATTGCCTCATTGAACCATGG+AGG | 0.695910 | 1_2:-76650871 | None:intergenic |
| TCTTTGATCATCACAATGTG+TGG | 0.696303 | 1_2:+76648737 | Msa0093740:exon |
| ACAAAAGCTGCTAAGCAATG+GGG | 0.697354 | 1_2:+76651178 | Msa0093740:CDS |
| GCAAGACTAACGGTTCCTGG+AGG | 0.731795 | 1_2:+76653225 | Msa0093740:CDS |
| GTTACTGCTAGATACCTGGC+CGG | 0.738427 | 1_2:+76651154 | Msa0093740:CDS |
| TGTCACAGATTGAAGCACCG+TGG | 0.798262 | 1_2:+76650064 | Msa0093740:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATAAAAAACTCT+AGG | - | chr1_2:76648975-76648994 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTGTATTTTTG+TGG | + | chr1_2:76648988-76649007 | Msa0093740:intron | 10.0% |
| !!! | AAAATATTTTAGTTTTAAGA+GGG | + | chr1_2:76649142-76649161 | Msa0093740:intron | 10.0% |
| !! | AATACTAATTAATACATATA+TGG | + | chr1_2:76649195-76649214 | Msa0093740:intron | 10.0% |
| !! | ATATAATTATCCATTTAAAT+TGG | + | chr1_2:76649441-76649460 | Msa0093740:intron | 10.0% |
| !! | TATAATTATCCATTTAAATT+GGG | + | chr1_2:76649442-76649461 | Msa0093740:intron | 10.0% |
| !!! | TTATTGATTATTATTCTAAT+TGG | - | chr1_2:76649980-76649999 | None:intergenic | 10.0% |
| !!! | TAAATTTTATCATAAAATTC+AGG | + | chr1_2:76650295-76650314 | Msa0093740:intron | 10.0% |
| !!! | CAAAATATTTTAGTTTTAAG+AGG | + | chr1_2:76649141-76649160 | Msa0093740:intron | 15.0% |
| !!! | TTTTTTCAATTGCAAAATAT+TGG | - | chr1_2:76649373-76649392 | None:intergenic | 15.0% |
| !!! | ATTCTCTTTAAAATATTTGA+TGG | - | chr1_2:76649403-76649422 | None:intergenic | 15.0% |
| !! | AATAAACAAAAATAAGACAT+GGG | + | chr1_2:76649740-76649759 | Msa0093740:intron | 15.0% |
| !!! | TTTTATTTTAATAAATCACG+TGG | + | chr1_2:76649895-76649914 | Msa0093740:intron | 15.0% |
| !!! | TTTATTTTAATAAATCACGT+GGG | + | chr1_2:76649896-76649915 | Msa0093740:intron | 15.0% |
| !! | TAATAATCAATAAGTAACTT+TGG | + | chr1_2:76649987-76650006 | Msa0093740:intron | 15.0% |
| !! | ACTATAGAATATTATTACAA+GGG | - | chr1_2:76650225-76650244 | None:intergenic | 15.0% |
| !! | AACTATAGAATATTATTACA+AGG | - | chr1_2:76650226-76650245 | None:intergenic | 15.0% |
| !!! | ATTAGCAATGTTTTAAATAA+AGG | - | chr1_2:76650452-76650471 | None:intergenic | 15.0% |
| !!! | ATTGCTTTAATCTTTATTTA+TGG | + | chr1_2:76651327-76651346 | Msa0093740:intron | 15.0% |
| !!! | CACATTTTTATAATATCATA+GGG | + | chr1_2:76651969-76651988 | Msa0093740:intron | 15.0% |
| !!! | ACATTTTTATAATATCATAG+GGG | + | chr1_2:76651970-76651989 | Msa0093740:intron | 15.0% |
| !! | TAATAAAATGTTACATCTTT+AGG | - | chr1_2:76652556-76652575 | None:intergenic | 15.0% |
| !! | TATGTAGTATAATAATATTC+TGG | - | chr1_2:76653491-76653510 | None:intergenic | 15.0% |
| !! | AAAGACAATAGTTTCTATAA+GGG | - | chr1_2:76648722-76648741 | None:intergenic | 20.0% |
| !!! | CTTTTATATAAATACCCTTT+AGG | + | chr1_2:76648878-76648897 | Msa0093740:intron | 20.0% |
| !! | AATATCAAAGTTAACCTAAA+GGG | - | chr1_2:76648895-76648914 | None:intergenic | 20.0% |
| !! | AAATATCAAAGTTAACCTAA+AGG | - | chr1_2:76648896-76648915 | None:intergenic | 20.0% |
| !! | ATATTAATCCTTGATATCAA+AGG | - | chr1_2:76649039-76649058 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAATTCACTTTTT+AGG | + | chr1_2:76649580-76649599 | Msa0093740:intron | 20.0% |
| !! | GAATAAACAAAAATAAGACA+TGG | + | chr1_2:76649739-76649758 | Msa0093740:intron | 20.0% |
| !! | ATAAACAAAAATAAGACATG+GGG | + | chr1_2:76649741-76649760 | Msa0093740:intron | 20.0% |
| !! | AAAATAAAAATTCCACATGT+AGG | - | chr1_2:76649884-76649903 | None:intergenic | 20.0% |
| !!! | TTATTCTAATTGGACTTTTT+TGG | - | chr1_2:76649970-76649989 | None:intergenic | 20.0% |
| !! | TGCTATATAGTATAATAAAG+TGG | + | chr1_2:76650262-76650281 | Msa0093740:intron | 20.0% |
| !!! | ACCATTAATGTTATTGATTT+TGG | + | chr1_2:76650478-76650497 | Msa0093740:intron | 20.0% |
| !! | ACCAAAATCAATAACATTAA+TGG | - | chr1_2:76650482-76650501 | None:intergenic | 20.0% |
| !!! | GAATGAAAAATCAATTTTAG+TGG | + | chr1_2:76651256-76651275 | Msa0093740:intron | 20.0% |
| !! | GGATTATTAAAAAAAATCGA+TGG | + | chr1_2:76651277-76651296 | Msa0093740:intron | 20.0% |
| !! | TGGAAAAAAACATTCATTTA+AGG | + | chr1_2:76651297-76651316 | Msa0093740:intron | 20.0% |
| !!! | TTATTTATGGTATGTTGATT+AGG | + | chr1_2:76651340-76651359 | Msa0093740:intron | 20.0% |
| !!! | TATTTATGGTATGTTGATTA+GGG | + | chr1_2:76651341-76651360 | Msa0093740:intron | 20.0% |
| !!! | GCACATTTTTATAATATCAT+AGG | + | chr1_2:76651968-76651987 | Msa0093740:intron | 20.0% |
| !!! | CATTTTTATAATATCATAGG+GGG | + | chr1_2:76651971-76651990 | Msa0093740:intron | 20.0% |
| !! | AAATAAATCAACATATGCAT+GGG | + | chr1_2:76652411-76652430 | Msa0093740:CDS | 20.0% |
| !! | CAACAAAAGTAAAATGAAAT+TGG | - | chr1_2:76652891-76652910 | None:intergenic | 20.0% |
| !!! | AATAATATTCTGGCTTTATT+AGG | - | chr1_2:76653481-76653500 | None:intergenic | 20.0% |
| !! | AAAATGCTATGTTATGTATA+AGG | + | chr1_2:76653564-76653583 | Msa0093740:three_prime_UTR | 20.0% |
| !! | AACACTATCATATTGTAATT+TGG | + | chr1_2:76653660-76653679 | Msa0093740:three_prime_UTR | 20.0% |
| !! | TTATGTTAAATTTGAATGCA+AGG | + | chr1_2:76653706-76653725 | Msa0093740:three_prime_UTR | 20.0% |
| ! | AGACAAAGAAAAAAAAGGAT+TGG | - | chr1_2:76648686-76648705 | None:intergenic | 25.0% |
| ! | TGAAGAGACAAAGAAAAAAA+AGG | - | chr1_2:76648691-76648710 | None:intergenic | 25.0% |
| ! | CAAAGACAATAGTTTCTATA+AGG | - | chr1_2:76648723-76648742 | None:intergenic | 25.0% |
| ! | ATATTAAGAATTGAGTGATG+AGG | + | chr1_2:76649094-76649113 | Msa0093740:intron | 25.0% |
| ! | TACTAGAAAAATCACCAAAA+TGG | + | chr1_2:76649283-76649302 | Msa0093740:intron | 25.0% |
| ! | TTCAATTGCAAAATATTGGA+TGG | - | chr1_2:76649369-76649388 | None:intergenic | 25.0% |
| !! | TAGTAACTAGTAGTTAGTTT+AGG | + | chr1_2:76649499-76649518 | Msa0093740:intron | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | - | chr1_2:76649679-76649698 | None:intergenic | 25.0% |
| ! | AATTGAATGAACCTAAAAAG+TGG | + | chr1_2:76649655-76649674 | Msa0093740:intron | 25.0% |
| !!! | TAAGCAAAAATCCACTTTTT+AGG | - | chr1_2:76649669-76649688 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | + | chr1_2:76649679-76649698 | Msa0093740:intron | 25.0% |
| ! | TGTTGTTATGATGCAATAAT+TGG | + | chr1_2:76649770-76649789 | Msa0093740:intron | 25.0% |
| ! | TTATGATGCAATAATTGGTT+CGG | + | chr1_2:76649775-76649794 | Msa0093740:intron | 25.0% |
| !!! | AAATTAATTTGTCCTACATG+TGG | + | chr1_2:76649869-76649888 | Msa0093740:intron | 25.0% |
| ! | TGGACTTTATGTATATGAAT+GGG | - | chr1_2:76649934-76649953 | None:intergenic | 25.0% |
| ! | TTGGACTTTATGTATATGAA+TGG | - | chr1_2:76649935-76649954 | None:intergenic | 25.0% |
| !!! | TTTTTGGTAGTGATTCTAAT+TGG | - | chr1_2:76649954-76649973 | None:intergenic | 25.0% |
| ! | AGACAAATCTATTATTGTCA+CGG | + | chr1_2:76650189-76650208 | Msa0093740:CDS | 25.0% |
| ! | TATCATAAAATTCAGGTGAA+TGG | + | chr1_2:76650302-76650321 | Msa0093740:intron | 25.0% |
| !! | TGAATAATTTGTGACAAGTT+TGG | + | chr1_2:76650710-76650729 | Msa0093740:intron | 25.0% |
| !!! | CAATTCTCACATTTTTAAGT+CGG | + | chr1_2:76650992-76651011 | Msa0093740:intron | 25.0% |
| ! | TAGTAAACTGAAATTCATGA+TGG | - | chr1_2:76651418-76651437 | None:intergenic | 25.0% |
| ! | TGAATTTCAGTTTACTATTC+AGG | + | chr1_2:76651421-76651440 | Msa0093740:CDS | 25.0% |
| !!! | TTTATTTTTGTGGTGTATGT+AGG | + | chr1_2:76652027-76652046 | Msa0093740:intron | 25.0% |
| ! | CAAATAAATCAACATATGCA+TGG | + | chr1_2:76652410-76652429 | Msa0093740:CDS | 25.0% |
| ! | AATAAATCAACATATGCATG+GGG | + | chr1_2:76652412-76652431 | Msa0093740:CDS | 25.0% |
| !! | TATCATTACCATTTTGTACT+CGG | - | chr1_2:76652500-76652519 | None:intergenic | 25.0% |
| ! | TTTCAGATAAAACATGAAGA+AGG | + | chr1_2:76652594-76652613 | Msa0093740:intron | 25.0% |
| ! | TGAAATTGGAAAGAAAATGT+TGG | - | chr1_2:76652877-76652896 | None:intergenic | 25.0% |
| !!! | GTTCTTGAATTTTTTCGTAT+AGG | + | chr1_2:76652933-76652952 | Msa0093740:intron | 25.0% |
| ! | TCTATAGTAATATGCTTCTT+TGG | - | chr1_2:76653016-76653035 | None:intergenic | 25.0% |
| ! | ATTTGATTAGGCCTTTATTA+AGG | - | chr1_2:76653179-76653198 | None:intergenic | 25.0% |
| ! | AGATTAGAAATTTCCATCTT+TGG | - | chr1_2:76653411-76653430 | None:intergenic | 25.0% |
| ! | AAGATGGAAATTTCTAATCT+TGG | + | chr1_2:76653411-76653430 | Msa0093740:CDS | 25.0% |
| ! | TATAGTCAATAATTGCATAG+AGG | + | chr1_2:76653509-76653528 | Msa0093740:three_prime_UTR | 25.0% |
| ! | TTTAAAAGAAAGACTAGATG+TGG | - | chr1_2:76653624-76653643 | None:intergenic | 25.0% |
| !! | GTCTTTCTTTTAAATTGATG+TGG | + | chr1_2:76653630-76653649 | Msa0093740:three_prime_UTR | 25.0% |
| ATTGGATAAAATGTGAAGAG+AGG | - | chr1_2:76648668-76648687 | None:intergenic | 30.0% | |
| GGTAAATAAGTGTTTGATCA+TGG | - | chr1_2:76648954-76648973 | None:intergenic | 30.0% | |
| ! | AATAATAAGCAGCACCATTT+TGG | - | chr1_2:76649300-76649319 | None:intergenic | 30.0% |
| TCACTATGACATTTAATACG+AGG | - | chr1_2:76649328-76649347 | None:intergenic | 30.0% | |
| ACAACTGAAAGATAAGCATT+GGG | - | chr1_2:76649469-76649488 | None:intergenic | 30.0% | |
| TACAACTGAAAGATAAGCAT+TGG | - | chr1_2:76649470-76649489 | None:intergenic | 30.0% | |
| AAACATACTTGACTTTGACA+AGG | + | chr1_2:76649524-76649543 | Msa0093740:intron | 30.0% | |
| TATTGCATCATAACAACATG+TGG | - | chr1_2:76649768-76649787 | None:intergenic | 30.0% | |
| !!! | TCTTGTTCGTTGATTTTGTT+GGG | - | chr1_2:76649808-76649827 | None:intergenic | 30.0% |
| ! | ATAACTATTTGGCTCATCAA+AGG | + | chr1_2:76650119-76650138 | Msa0093740:CDS | 30.0% |
| TGTTGTTAGTATGAAGAGTA+TGG | + | chr1_2:76650508-76650527 | Msa0093740:intron | 30.0% | |
| ! | AGAGTATGGAGAAAATTTTG+TGG | + | chr1_2:76650522-76650541 | Msa0093740:CDS | 30.0% |
| ! | AGAAAATTTTGTGGACATGT+TGG | + | chr1_2:76650531-76650550 | Msa0093740:CDS | 30.0% |
| ! | TATCTTTTCATTTGTTCTGC+TGG | + | chr1_2:76650558-76650577 | Msa0093740:CDS | 30.0% |
| ! | TTGTTATTGTAGGTTCTGTT+TGG | + | chr1_2:76650740-76650759 | Msa0093740:intron | 30.0% |
| TGGATTGCATCAGAATTAAA+AGG | + | chr1_2:76650760-76650779 | Msa0093740:CDS | 30.0% | |
| GGATTGCATCAGAATTAAAA+GGG | + | chr1_2:76650761-76650780 | Msa0093740:CDS | 30.0% | |
| TCAAAACTAGAGGATCATAA+GGG | - | chr1_2:76650909-76650928 | None:intergenic | 30.0% | |
| !!! | ATTTTTAAGTCGGTTCTGTA+AGG | + | chr1_2:76651002-76651021 | Msa0093740:intron | 30.0% |
| TTAGACTCAGTATAGCTAAT+AGG | + | chr1_2:76651030-76651049 | Msa0093740:intron | 30.0% | |
| GGATTGATATGTTTGATTAC+AGG | + | chr1_2:76651051-76651070 | Msa0093740:intron | 30.0% | |
| AAATTACACTCATTCTGTGT+AGG | + | chr1_2:76651205-76651224 | Msa0093740:CDS | 30.0% | |
| AATTACACTCATTCTGTGTA+GGG | + | chr1_2:76651206-76651225 | Msa0093740:CDS | 30.0% | |
| CTCAAAATTGCAAAAAGTTG+CGG | + | chr1_2:76651606-76651625 | Msa0093740:intron | 30.0% | |
| ATATGATGTAACCACAATCA+GGG | + | chr1_2:76652093-76652112 | Msa0093740:CDS | 30.0% | |
| ! | AGGGTATTTGTATTTCCATA+AGG | + | chr1_2:76652207-76652226 | Msa0093740:CDS | 30.0% |
| ATGAAATCCTTGTCCAAAAA+TGG | - | chr1_2:76652454-76652473 | None:intergenic | 30.0% | |
| GGATTTCATAAAAGTTGCAA+TGG | + | chr1_2:76652465-76652484 | Msa0093740:CDS | 30.0% | |
| ! | ATCATTACCATTTTGTACTC+GGG | - | chr1_2:76652499-76652518 | None:intergenic | 30.0% |
| TCGACATAAATTGTAGCAAA+TGG | - | chr1_2:76652702-76652721 | None:intergenic | 30.0% | |
| ! | TCATGCAGCACATTTTATAT+AGG | + | chr1_2:76652767-76652786 | Msa0093740:intron | 30.0% |
| TAATATGCTTCTTTGGTAAG+TGG | - | chr1_2:76653009-76653028 | None:intergenic | 30.0% | |
| ACTATAGAATGATCTTTGAG+AGG | + | chr1_2:76653028-76653047 | Msa0093740:CDS | 30.0% | |
| TGATTGATTAAGTTACCTGA+GGG | - | chr1_2:76653059-76653078 | None:intergenic | 30.0% | |
| TTGATTGATTAAGTTACCTG+AGG | - | chr1_2:76653060-76653079 | None:intergenic | 30.0% | |
| TCCCAACATAACCTTAATAA+AGG | + | chr1_2:76653165-76653184 | Msa0093740:intron | 30.0% | |
| GCCTTTATTAAGGTTATGTT+GGG | - | chr1_2:76653169-76653188 | None:intergenic | 30.0% | |
| ATCTTTGGTATAATCTTCTC+TGG | - | chr1_2:76653396-76653415 | None:intergenic | 30.0% | |
| AGAGAAGATTATACCAAAGA+TGG | + | chr1_2:76653395-76653414 | Msa0093740:CDS | 30.0% | |
| !! | TGTCTCATATTAGCTTTGAA+TGG | - | chr1_2:76653442-76653461 | None:intergenic | 30.0% |
| TTCAAAGCTAATATGAGACA+TGG | + | chr1_2:76653442-76653461 | Msa0093740:exon | 30.0% | |
| AGAAGAAGACACGAAAAACA+AGG | - | chr1_2:76648633-76648652 | None:intergenic | 35.0% | |
| TCTTTGATCATCACAATGTG+TGG | + | chr1_2:76648737-76648756 | Msa0093740:exon | 35.0% | |
| ! | TTTTGTGGTTTACAAGCTCA+TGG | + | chr1_2:76649003-76649022 | Msa0093740:intron | 35.0% |
| TTTGTGGTTTACAAGCTCAT+GGG | + | chr1_2:76649004-76649023 | Msa0093740:intron | 35.0% | |
| ! | CAACTGAAAGATAAGCATTG+GGG | - | chr1_2:76649468-76649487 | None:intergenic | 35.0% |
| !!! | CTCTTGTTCGTTGATTTTGT+TGG | - | chr1_2:76649809-76649828 | None:intergenic | 35.0% |
| AATAGTTATCACCATGTTGG+TGG | - | chr1_2:76650108-76650127 | None:intergenic | 35.0% | |
| CCAAATAGTTATCACCATGT+TGG | - | chr1_2:76650111-76650130 | None:intergenic | 35.0% | |
| CCAACATGGTGATAACTATT+TGG | + | chr1_2:76650108-76650127 | Msa0093740:CDS | 35.0% | |
| GATTTGTCTTCATTGAAGAG+AGG | - | chr1_2:76650178-76650197 | None:intergenic | 35.0% | |
| TGTGTACGGAATTTGTGATT+AGG | - | chr1_2:76650365-76650384 | None:intergenic | 35.0% | |
| ! | AATTTTGTGGACATGTTGGA+TGG | + | chr1_2:76650535-76650554 | Msa0093740:CDS | 35.0% |
| ACAACAGTTTCATTGTTGCA+AGG | + | chr1_2:76650590-76650609 | Msa0093740:CDS | 35.0% | |
| CAACAGTTTCATTGTTGCAA+GGG | + | chr1_2:76650591-76650610 | Msa0093740:CDS | 35.0% | |
| !!! | TGGCACGTTTTTGTTATTGT+AGG | + | chr1_2:76650730-76650749 | Msa0093740:intron | 35.0% |
| !!! | CATTTTGAAGTTTTTCCACC+TGG | + | chr1_2:76650802-76650821 | Msa0093740:CDS | 35.0% |
| ATAATTGCCTCATTGAACCA+TGG | - | chr1_2:76650877-76650896 | None:intergenic | 35.0% | |
| CAAAACTAGAGGATCATAAG+GGG | - | chr1_2:76650908-76650927 | None:intergenic | 35.0% | |
| CTCAAAACTAGAGGATCATA+AGG | - | chr1_2:76650910-76650929 | None:intergenic | 35.0% | |
| !!! | CTTATGATCCTCTAGTTTTG+AGG | + | chr1_2:76650908-76650927 | Msa0093740:CDS | 35.0% |
| CTAAGCGCTTTATAAACTCT+TGG | - | chr1_2:76650971-76650990 | None:intergenic | 35.0% | |
| GATTACAGGCTGTGATAAAA+AGG | + | chr1_2:76651065-76651084 | Msa0093740:intron | 35.0% | |
| ! | TGTTTTACTATCTGGAGGTT+TGG | + | chr1_2:76651111-76651130 | Msa0093740:CDS | 35.0% |
| ! | AGAGAAGTAGCAGACTTTTT+AGG | + | chr1_2:76651386-76651405 | Msa0093740:CDS | 35.0% |
| CTCATAATTGCGAAAAGTTG+CGG | + | chr1_2:76651475-76651494 | Msa0093740:intron | 35.0% | |
| CAAAAAGTTGCGGTCTAATA+GGG | + | chr1_2:76651616-76651635 | Msa0093740:intron | 35.0% | |
| ACGAAAAGTTGCTGTCAAAT+AGG | + | chr1_2:76651744-76651763 | Msa0093740:intron | 35.0% | |
| CGAAAAGTTGCTGTCAAATA+GGG | + | chr1_2:76651745-76651764 | Msa0093740:intron | 35.0% | |
| TTGATGTCACAGTCTGAATT+TGG | + | chr1_2:76651811-76651830 | Msa0093740:intron | 35.0% | |
| TGATGTCACAGTCTGAATTT+GGG | + | chr1_2:76651812-76651831 | Msa0093740:intron | 35.0% | |
| CGAAAAGTTGCAGTCAAATA+GGG | + | chr1_2:76651876-76651895 | Msa0093740:intron | 35.0% | |
| ! | TTTTTGTGGTGTATGTAGGA+TGG | + | chr1_2:76652031-76652050 | Msa0093740:intron | 35.0% |
| CATATGATGTAACCACAATC+AGG | + | chr1_2:76652092-76652111 | Msa0093740:CDS | 35.0% | |
| TTTCGAGACATCAGAAACAT+AGG | - | chr1_2:76652127-76652146 | None:intergenic | 35.0% | |
| TCTCGAAAGATCAAATCATC+AGG | + | chr1_2:76652139-76652158 | Msa0093740:CDS | 35.0% | |
| TCAAATCATCAGGAGTCAAA+TGG | + | chr1_2:76652149-76652168 | Msa0093740:CDS | 35.0% | |
| CAAATCATCAGGAGTCAAAT+GGG | + | chr1_2:76652150-76652169 | Msa0093740:CDS | 35.0% | |
| ! | GAAGGATCTGATGAGATTTT+TGG | + | chr1_2:76652184-76652203 | Msa0093740:CDS | 35.0% |
| !! | GATCTGATGAGATTTTTGGA+GGG | + | chr1_2:76652188-76652207 | Msa0093740:CDS | 35.0% |
| TGGTGAAACTCTTCTTTGTT+TGG | - | chr1_2:76652235-76652254 | None:intergenic | 35.0% | |
| !! | AGAAGCTAGAGTACCATTTT+TGG | + | chr1_2:76652438-76652457 | Msa0093740:CDS | 35.0% |
| !! | TAGAGTACCATTTTTGGACA+AGG | + | chr1_2:76652444-76652463 | Msa0093740:CDS | 35.0% |
| AAGAAGGAAGAATCGAGAAA+TGG | + | chr1_2:76652610-76652629 | Msa0093740:CDS | 35.0% | |
| GAATCGAGAAATGGATACTA+AGG | + | chr1_2:76652619-76652638 | Msa0093740:CDS | 35.0% | |
| AGAAAATCCTTATCTGCCTA+AGG | + | chr1_2:76652659-76652678 | Msa0093740:CDS | 35.0% | |
| ! | AAAGTAGAGTAGAGTACCTT+AGG | - | chr1_2:76652678-76652697 | None:intergenic | 35.0% |
| ! | GCACATTTTATATAGGCAGA+AGG | + | chr1_2:76652774-76652793 | Msa0093740:intron | 35.0% |
| ! | TGGTTGGATTGATGGTATTA+AGG | + | chr1_2:76652822-76652841 | Msa0093740:CDS | 35.0% |
| ! | TGTTTACATGTTTTGCAGCA+TGG | - | chr1_2:76652849-76652868 | None:intergenic | 35.0% |
| GGCCTTTATTAAGGTTATGT+TGG | - | chr1_2:76653170-76653189 | None:intergenic | 35.0% | |
| CGAAACACAGAGATTTGATT+AGG | - | chr1_2:76653191-76653210 | None:intergenic | 35.0% | |
| ! | GTGTTTCGATTTGTAGAACT+CGG | + | chr1_2:76653203-76653222 | Msa0093740:intron | 35.0% |
| ! | GCCTGTTGTGTATTTTATCA+AGG | + | chr1_2:76653540-76653559 | Msa0093740:three_prime_UTR | 35.0% |
| GCCTTGATAAAATACACAAC+AGG | - | chr1_2:76653544-76653563 | None:intergenic | 35.0% | |
| AAAACAAGGTGCAAAGAGTG+TGG | - | chr1_2:76648619-76648638 | None:intergenic | 40.0% | |
| !! | TGTGGTATACTTGCTGTACT+TGG | + | chr1_2:76648755-76648774 | Msa0093740:CDS | 40.0% |
| TGATGACTCACAAGCTAAGA+GGG | + | chr1_2:76648784-76648803 | Msa0093740:CDS | 40.0% | |
| GTGGTTGTCCTTTGATATCA+AGG | + | chr1_2:76649028-76649047 | Msa0093740:intron | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | - | chr1_2:76649683-76649702 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | - | chr1_2:76649682-76649701 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | + | chr1_2:76649682-76649701 | Msa0093740:intron | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | + | chr1_2:76649683-76649702 | Msa0093740:intron | 40.0% | |
| TCTACAATCATGAAGACCTC+AGG | + | chr1_2:76650330-76650349 | Msa0093740:CDS | 40.0% | |
| GATTAGGCAATTGTTTCCTG+AGG | - | chr1_2:76650349-76650368 | None:intergenic | 40.0% | |
| CATCACAGTCACATTGTGTA+CGG | - | chr1_2:76650379-76650398 | None:intergenic | 40.0% | |
| ATTGTTGCAAGGGATGCTAT+AGG | + | chr1_2:76650601-76650620 | Msa0093740:CDS | 40.0% | |
| TCACTTCCTTGTACATTGGT+TGG | + | chr1_2:76650626-76650645 | Msa0093740:CDS | 40.0% | |
| ! | CACTTCCTTGTACATTGGTT+GGG | + | chr1_2:76650627-76650646 | Msa0093740:CDS | 40.0% |
| ! | ACTTCCTTGTACATTGGTTG+GGG | + | chr1_2:76650628-76650647 | Msa0093740:CDS | 40.0% |
| ATTTGTACTCGAGCAAAGAC+CGG | + | chr1_2:76650827-76650846 | Msa0093740:CDS | 40.0% | |
| ! | AAGGCATTCCTCAAAACTAG+AGG | - | chr1_2:76650919-76650938 | None:intergenic | 40.0% |
| ! | TTTGAGGAATGCCTTTGAGA+AGG | + | chr1_2:76650924-76650943 | Msa0093740:CDS | 40.0% |
| TTTGAGTCTTGCCTTCTCAA+AGG | - | chr1_2:76650938-76650957 | None:intergenic | 40.0% | |
| CCAGATAGTAAAACACCGAA+CGG | - | chr1_2:76651106-76651125 | None:intergenic | 40.0% | |
| !!! | TTCGGTGTTTTACTATCTGG+AGG | + | chr1_2:76651106-76651125 | Msa0093740:CDS | 40.0% |
| TGGAGGTTTGGATTCTTCAT+TGG | + | chr1_2:76651123-76651142 | Msa0093740:CDS | 40.0% | |
| CACAAAAGCTGCTAAGCAAT+GGG | + | chr1_2:76651177-76651196 | Msa0093740:CDS | 40.0% | |
| ACAAAAGCTGCTAAGCAATG+GGG | + | chr1_2:76651178-76651197 | Msa0093740:CDS | 40.0% | |
| CGAAAAGTTGCGGTCAAATA+GGG | + | chr1_2:76651485-76651504 | Msa0093740:intron | 40.0% | |
| CACAATAAAGACTGCGACAT+TGG | - | chr1_2:76651554-76651573 | None:intergenic | 40.0% | |
| CAATGTCGCAGTCTTTATTG+TGG | + | chr1_2:76651552-76651571 | Msa0093740:intron | 40.0% | |
| GCAAAAAGTTGCGGTCTAAT+AGG | + | chr1_2:76651615-76651634 | Msa0093740:intron | 40.0% | |
| CATGCAGACATCAAAAACCT+TGG | + | chr1_2:76651663-76651682 | Msa0093740:intron | 40.0% | |
| ATAAATTCTGAGCGACACCA+AGG | - | chr1_2:76651683-76651702 | None:intergenic | 40.0% | |
| GCGAAAAGTTGCAGTCAAAT+AGG | + | chr1_2:76651875-76651894 | Msa0093740:intron | 40.0% | |
| TGAAGTCACAGTCTAGATTG+CGG | + | chr1_2:76651943-76651962 | Msa0093740:intron | 40.0% | |
| ! | AAATGGGTGATTTCTGGAGA+AGG | + | chr1_2:76652166-76652185 | Msa0093740:CDS | 40.0% |
| !! | GGATCTGATGAGATTTTTGG+AGG | + | chr1_2:76652187-76652206 | Msa0093740:CDS | 40.0% |
| !! | CTTCTTTGTTTGGTGCCTTA+TGG | - | chr1_2:76652225-76652244 | None:intergenic | 40.0% |
| GATGTAGGTCTATTACCTTG+CGG | - | chr1_2:76652267-76652286 | None:intergenic | 40.0% | |
| AAACATGAGCGATGTGATGT+AGG | - | chr1_2:76652282-76652301 | None:intergenic | 40.0% | |
| ATCACATCGCTCATGTTTGA+AGG | + | chr1_2:76652284-76652303 | Msa0093740:intron | 40.0% | |
| TCACATCGCTCATGTTTGAA+GGG | + | chr1_2:76652285-76652304 | Msa0093740:intron | 40.0% | |
| TGCAGATCAAAGCTCTTCAT+AGG | + | chr1_2:76652371-76652390 | Msa0093740:intron | 40.0% | |
| CATTGATCCCGAGTACAAAA+TGG | + | chr1_2:76652489-76652508 | Msa0093740:CDS | 40.0% | |
| CGAGAAATGGATACTAAGGA+AGG | + | chr1_2:76652623-76652642 | Msa0093740:CDS | 40.0% | |
| ! | TAGAGTACCTTAGGCAGATA+AGG | - | chr1_2:76652669-76652688 | None:intergenic | 40.0% |
| !! | TTGGTAAGTGGAGTGTTGAA+AGG | - | chr1_2:76652997-76653016 | None:intergenic | 40.0% |
| CACAGAGAAAGCTATTGAGT+GGG | + | chr1_2:76653266-76653285 | Msa0093740:CDS | 40.0% | |
| !! | TTTTGGCAACTGAGTTGACT+TGG | - | chr1_2:76653365-76653384 | None:intergenic | 40.0% |
| AGCTAATATGAGACATGGCA+AGG | + | chr1_2:76653447-76653466 | Msa0093740:exon | 40.0% | |
| CTGATGACTCACAAGCTAAG+AGG | + | chr1_2:76648783-76648802 | Msa0093740:CDS | 45.0% | |
| AGAATTGAGTGATGAGGACG+AGG | + | chr1_2:76649100-76649119 | Msa0093740:intron | 45.0% | |
| GAGGACGAGGAATGAAAGAA+TGG | + | chr1_2:76649113-76649132 | Msa0093740:intron | 45.0% | |
| GCATTGGGGCCCAATTTAAA+TGG | - | chr1_2:76649454-76649473 | None:intergenic | 45.0% | |
| GTAATGTGTCATACACCCTC+CGG | - | chr1_2:76649701-76649720 | None:intergenic | 45.0% | |
| ACCAGAAGCAGGATCAACAA+TGG | - | chr1_2:76650149-76650168 | None:intergenic | 45.0% | |
| CTGTGATGTTATTGCACACC+TGG | + | chr1_2:76650391-76650410 | Msa0093740:CDS | 45.0% | |
| !! | GGTGTCACTTCCTTGTACAT+TGG | + | chr1_2:76650622-76650641 | Msa0093740:CDS | 45.0% |
| TAGTCCCCAACCAATGTACA+AGG | - | chr1_2:76650635-76650654 | None:intergenic | 45.0% | |
| ! | TACATTGGTTGGGGACTAGA+TGG | + | chr1_2:76650637-76650656 | Msa0093740:CDS | 45.0% |
| TTGCTCGAGTACAAATGACC+AGG | - | chr1_2:76650823-76650842 | None:intergenic | 45.0% | |
| TTTGTACTCGAGCAAAGACC+GGG | + | chr1_2:76650828-76650847 | Msa0093740:CDS | 45.0% | |
| TGTACCATCTACGAAACTCC+CGG | - | chr1_2:76650849-76650868 | None:intergenic | 45.0% | |
| GTAGATGGTACAATCCTCCA+TGG | + | chr1_2:76650857-76650876 | Msa0093740:CDS | 45.0% | |
| CAATCCTCCATGGTTCAATG+AGG | + | chr1_2:76650867-76650886 | Msa0093740:CDS | 45.0% | |
| ATTGCCTCATTGAACCATGG+AGG | - | chr1_2:76650874-76650893 | None:intergenic | 45.0% | |
| AGAGGATCATAAGGGGTTGT+TGG | - | chr1_2:76650901-76650920 | None:intergenic | 45.0% | |
| ! | TTGATGACTGATGTGCCGTT+CGG | + | chr1_2:76651088-76651107 | Msa0093740:CDS | 45.0% |
| !!! | CCGTTCGGTGTTTTACTATC+TGG | + | chr1_2:76651103-76651122 | Msa0093740:CDS | 45.0% |
| AGCAGTTACTGCTAGATACC+TGG | + | chr1_2:76651150-76651169 | Msa0093740:CDS | 45.0% | |
| ! | TTGCTTAGCAGCTTTTGTGC+CGG | - | chr1_2:76651176-76651195 | None:intergenic | 45.0% |
| GCACAAAAGCTGCTAAGCAA+TGG | + | chr1_2:76651176-76651195 | Msa0093740:CDS | 45.0% | |
| CTCATTCTGTGTAGGGCTTA+AGG | + | chr1_2:76651213-76651232 | Msa0093740:CDS | 45.0% | |
| CTACTTCTCTTCCAGCCTTA+AGG | - | chr1_2:76651376-76651395 | None:intergenic | 45.0% | |
| GCGAAAAGTTGCGGTCAAAT+AGG | + | chr1_2:76651484-76651503 | Msa0093740:intron | 45.0% | |
| GGATGGCATAGATGCAATTG+AGG | + | chr1_2:76652048-76652067 | Msa0093740:intron | 45.0% | |
| GGAGTCAAATGGGTGATTTC+TGG | + | chr1_2:76652160-76652179 | Msa0093740:CDS | 45.0% | |
| TTACCTTGCGGCATGTTTCT+TGG | - | chr1_2:76652255-76652274 | None:intergenic | 45.0% | |
| CAGAAGGAACAGTTCAGTGA+TGG | + | chr1_2:76652790-76652809 | Msa0093740:CDS | 45.0% | |
| ! | GAACAGTTCAGTGATGGAGT+TGG | + | chr1_2:76652796-76652815 | Msa0093740:CDS | 45.0% |
| ! | TTCAGTGATGGAGTTGGCTA+TGG | + | chr1_2:76652802-76652821 | Msa0093740:CDS | 45.0% |
| GTTGGCTATGGTTGGATTGA+TGG | + | chr1_2:76652814-76652833 | Msa0093740:CDS | 45.0% | |
| GTAGAACTCGGCAAGACTAA+CGG | + | chr1_2:76653215-76653234 | Msa0093740:intron | 45.0% | |
| GCACAGAGAAAGCTATTGAG+TGG | + | chr1_2:76653265-76653284 | Msa0093740:CDS | 45.0% | |
| CTATTGAGTGGGATGCTTCT+TGG | + | chr1_2:76653277-76653296 | Msa0093740:CDS | 45.0% | |
| TCAAGCAACCTTGATCCATC+TGG | + | chr1_2:76653300-76653319 | Msa0093740:CDS | 45.0% | |
| !!! | CTTCTCTGGCTCTACAGTTT+TGG | - | chr1_2:76653382-76653401 | None:intergenic | 45.0% |
| !!! | TTAATTTTATTTTATTTTTG+TGG | + | chr1_2:76652017-76652036 | Msa0093740:intron | 5.0% |
| ATTGCCTGCGAGAAAGCTCA+AGG | - | chr1_2:76648817-76648836 | None:intergenic | 50.0% | |
| GGTTTACAAGCTCATGGGAG+TGG | + | chr1_2:76649009-76649028 | Msa0093740:intron | 50.0% | |
| GAGTACACAACTACACCCTC+CGG | + | chr1_2:76649548-76649567 | Msa0093740:intron | 50.0% | |
| !! | TGTCACAGATTGAAGCACCG+TGG | + | chr1_2:76650064-76650083 | Msa0093740:intron | 50.0% |
| GCCATTGTTGATCCTGCTTC+TGG | + | chr1_2:76650145-76650164 | Msa0093740:CDS | 50.0% | |
| ! | AGAGGTTGATCACCAGAAGC+AGG | - | chr1_2:76650160-76650179 | None:intergenic | 50.0% |
| CACACCTGGTTAGTATGTCG+CGG | + | chr1_2:76650405-76650424 | Msa0093740:intron | 50.0% | |
| TAGACCGCGACATACTAACC+AGG | - | chr1_2:76650412-76650431 | None:intergenic | 50.0% | |
| GTATGTCGCGGTCTAGATTG+CGG | + | chr1_2:76650417-76650436 | Msa0093740:intron | 50.0% | |
| CTCGAGTACAAATGACCAGG+TGG | - | chr1_2:76650820-76650839 | None:intergenic | 50.0% | |
| AAGACCGGGAGTTTCGTAGA+TGG | + | chr1_2:76650842-76650861 | Msa0093740:CDS | 50.0% | |
| GTTACTGCTAGATACCTGGC+CGG | + | chr1_2:76651154-76651173 | Msa0093740:CDS | 50.0% | |
| TTAGGGTGCACCTGACCTTA+AGG | + | chr1_2:76651358-76651377 | Msa0093740:intron | 50.0% | |
| TCTCTTCCAGCCTTAAGGTC+AGG | - | chr1_2:76651371-76651390 | None:intergenic | 50.0% | |
| TCACCAAGAAACATGCCGCA+AGG | + | chr1_2:76652249-76652268 | Msa0093740:CDS | 50.0% | |
| ! | GTGATGGAGTTGGCTATGGT+TGG | + | chr1_2:76652806-76652825 | Msa0093740:CDS | 50.0% |
| ! | CTTTGAGAGGTCTTTCCCTC+AGG | + | chr1_2:76653041-76653060 | Msa0093740:CDS | 50.0% |
| CTGCTCTTCCAGATGGATCA+AGG | - | chr1_2:76653311-76653330 | None:intergenic | 50.0% | |
| CCAAATGCTGCTCTTCCAGA+TGG | - | chr1_2:76653318-76653337 | None:intergenic | 50.0% | |
| CCATCTGGAAGAGCAGCATT+TGG | + | chr1_2:76653315-76653334 | Msa0093740:CDS | 50.0% | |
| GCATCCTTGAGCTTTCTCGC+AGG | + | chr1_2:76648810-76648829 | Msa0093740:CDS | 55.0% | |
| !! | AGGTGTTGCTGCCCTGATTG+TGG | - | chr1_2:76652107-76652126 | None:intergenic | 55.0% |
| TCGGCAAGACTAACGGTTCC+TGG | + | chr1_2:76653222-76653241 | Msa0093740:CDS | 55.0% | |
| GCAAGACTAACGGTTCCTGG+AGG | + | chr1_2:76653225-76653244 | Msa0093740:CDS | 55.0% | |
| CATGCAACACTAGCTCCTCC+AGG | - | chr1_2:76653243-76653262 | None:intergenic | 55.0% | |
| !! | TGAAGCACCGTGGTCCAGAC+TGG | + | chr1_2:76650074-76650093 | Msa0093740:CDS | 60.0% |
| ACCGTGGTCCAGACTGGAGT+GGG | + | chr1_2:76650080-76650099 | Msa0093740:CDS | 60.0% | |
| ! | TGGAGTGGGCTCCACCAACA+TGG | + | chr1_2:76650094-76650113 | Msa0093740:CDS | 60.0% |
| !! | TAGCAGCTTTTGTGCCGGCC+AGG | - | chr1_2:76651171-76651190 | None:intergenic | 60.0% |
| GGTGCACCTGACCTTAAGGC+TGG | + | chr1_2:76651362-76651381 | Msa0093740:CDS | 60.0% | |
| CACCGTGGTCCAGACTGGAG+TGG | + | chr1_2:76650079-76650098 | Msa0093740:CDS | 65.0% | |
| GCCCACTCCAGTCTGGACCA+CGG | - | chr1_2:76650084-76650103 | None:intergenic | 65.0% | |
| TGGTGGAGCCCACTCCAGTC+TGG | - | chr1_2:76650091-76650110 | None:intergenic | 65.0% | |
| CGGTCTAGATTGCGGTCGCG+CGG | + | chr1_2:76650425-76650444 | Msa0093740:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 76648606 | 76653732 | 76648606 | ID=Msa0093740;Name=Msa0093740 |
| chr1_2 | mRNA | 76648606 | 76653732 | 76648606 | ID=Msa0093740-mRNA-1;Parent=Msa0093740;Name=Msa0093740-mRNA-1;_AED=0.08;_eAED=0.08;_QI=146|1|1|1|1|1|13|280|586 |
| chr1_2 | exon | 76648606 | 76648831 | 76648606 | ID=Msa0093740-mRNA-1:exon:27093;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76650072 | 76650210 | 76650072 | ID=Msa0093740-mRNA-1:exon:27094;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76650317 | 76650412 | 76650317 | ID=Msa0093740-mRNA-1:exon:27095;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76650517 | 76650658 | 76650517 | ID=Msa0093740-mRNA-1:exon:27096;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76650752 | 76650945 | 76650752 | ID=Msa0093740-mRNA-1:exon:27097;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76651073 | 76651234 | 76651073 | ID=Msa0093740-mRNA-1:exon:27098;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76651362 | 76651442 | 76651362 | ID=Msa0093740-mRNA-1:exon:27099;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76652049 | 76652270 | 76652049 | ID=Msa0093740-mRNA-1:exon:27100;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76652376 | 76652510 | 76652376 | ID=Msa0093740-mRNA-1:exon:27101;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76652600 | 76652680 | 76652600 | ID=Msa0093740-mRNA-1:exon:27102;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76652775 | 76652861 | 76652775 | ID=Msa0093740-mRNA-1:exon:27103;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76652955 | 76653062 | 76652955 | ID=Msa0093740-mRNA-1:exon:27104;Parent=Msa0093740-mRNA-1 |
| chr1_2 | exon | 76653219 | 76653732 | 76653219 | ID=Msa0093740-mRNA-1:exon:27105;Parent=Msa0093740-mRNA-1 |
| chr1_2 | five_prime_UTR | 76648606 | 76648751 | 76648606 | ID=Msa0093740-mRNA-1:five_prime_utr;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76648752 | 76648831 | 76648752 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76650072 | 76650210 | 76650072 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76650317 | 76650412 | 76650317 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76650517 | 76650658 | 76650517 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76650752 | 76650945 | 76650752 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76651073 | 76651234 | 76651073 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76651362 | 76651442 | 76651362 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76652049 | 76652270 | 76652049 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76652376 | 76652510 | 76652376 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76652600 | 76652680 | 76652600 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76652775 | 76652861 | 76652775 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76652955 | 76653062 | 76652955 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | CDS | 76653219 | 76653452 | 76653219 | ID=Msa0093740-mRNA-1:cds;Parent=Msa0093740-mRNA-1 |
| chr1_2 | three_prime_UTR | 76653453 | 76653732 | 76653453 | ID=Msa0093740-mRNA-1:three_prime_utr;Parent=Msa0093740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
