AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1331650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331650 MtrunA17_Chr4g0061401 89.671 213 14 1 14 226 14 218 6.67e-91 266
Msa1331650 MtrunA17_Chr5g0419121 59.633 109 41 2 4 109 2 110 1.66e-36 129
Msa1331650 MtrunA17_Chr8g0378361 55.789 95 41 1 21 114 27 121 1.88e-31 114
Msa1331650 MtrunA17_Chr4g0043151 45.946 148 62 5 1 146 1 132 1.93e-28 106
Msa1331650 MtrunA17_Chr4g0043511 39.623 106 63 1 22 126 418 523 6.03e-25 102
Msa1331650 MtrunA17_Chr8g0378371 45.045 111 55 3 1 109 10 116 6.79e-25 94.7
Msa1331650 MtrunA17_Chr8g0378381 41.667 108 61 2 1 107 10 116 2.09e-24 93.6
Msa1331650 MtrunA17_Chr8g0378401 41.121 107 61 2 1 106 10 115 3.49e-23 90.5
Msa1331650 MtrunA17_Chr3g0110371 46.154 104 54 2 24 125 361 464 3.98e-23 96.7
Msa1331650 MtrunA17_Chr5g0434591 47.959 98 49 2 20 115 356 453 6.44e-23 96.3
Msa1331650 MtrunA17_Chr3g0120401 50.000 92 45 1 19 109 152 243 2.31e-22 91.7
Msa1331650 MtrunA17_Chr8g0381081 45.631 103 52 3 24 124 57 157 4.97e-22 89.0
Msa1331650 MtrunA17_Chr4g0034901 45.918 98 50 3 14 108 364 461 1.39e-21 92.4
Msa1331650 MtrunA17_Chr1g0177171 51.724 87 40 2 24 108 406 492 2.34e-21 91.7
Msa1331650 MtrunA17_Chr1g0154991 44.681 94 51 1 14 106 10 103 3.62e-21 84.7
Msa1331650 MtrunA17_Chr5g0447651 42.982 114 57 4 1 106 1 114 4.17e-21 85.1
Msa1331650 MtrunA17_Chr1g0213651 43.820 89 49 1 19 106 271 359 7.59e-21 89.4
Msa1331650 MtrunA17_Chr1g0193131 56.410 78 32 2 24 100 420 496 1.35e-20 89.7
Msa1331650 MtrunA17_Chr8g0378621 48.421 95 47 2 24 116 364 458 1.68e-20 89.4
Msa1331650 MtrunA17_Chr4g0040911 44.248 113 60 3 24 134 37 148 2.36e-20 84.7
Msa1331650 MtrunA17_Chr4g0075031 45.161 93 49 2 24 114 382 474 2.62e-20 89.0
Msa1331650 MtrunA17_Chr3g0121271 47.917 96 48 2 20 113 358 453 6.93e-20 87.4
Msa1331650 MtrunA17_Chr5g0439251 53.165 79 35 2 24 100 382 460 1.25e-19 86.7
Msa1331650 MtrunA17_Chr3g0144531 44.211 95 51 2 14 106 360 454 1.33e-19 86.7
Msa1331650 MtrunA17_Chr5g0401301 49.495 99 42 5 14 106 318 414 1.37e-19 86.3
Msa1331650 MtrunA17_Chr2g0304061 45.000 100 49 3 24 122 158 252 3.59e-19 84.3
Msa1331650 MtrunA17_Chr7g0271411 47.674 86 42 3 24 107 160 244 8.79e-19 83.2
Msa1331650 MtrunA17_Chr1g0161011 44.211 95 51 2 24 116 361 455 1.02e-18 84.3
Msa1331650 MtrunA17_Chr5g0443331 37.879 132 79 3 18 147 102 232 1.97e-18 81.6
Msa1331650 MtrunA17_Chr4g0076131 36.111 108 67 2 1 106 5 112 1.19e-17 75.9
Msa1331650 MtrunA17_Chr4g0076141 46.914 81 39 3 23 100 12 91 1.49e-17 75.1
Msa1331650 MtrunA17_Chr8g0389741 42.353 85 47 2 24 106 368 452 2.69e-17 80.1
Msa1331650 MtrunA17_Chr7g0223961 35.870 92 58 1 14 104 355 446 1.06e-16 78.2
Msa1331650 MtrunA17_Chr6g0487261 38.372 86 50 2 24 106 369 454 4.84e-16 76.3
Msa1331650 MtrunA17_Chr3g0096451 44.318 88 46 3 22 107 110 196 7.11e-16 74.3
Msa1331650 MtrunA17_Chr2g0313891 42.857 84 46 2 24 106 30 112 9.21e-15 68.2
Msa1331650 MtrunA17_Chr8g0339191 37.931 87 52 2 24 108 374 460 1.33e-12 66.2
Msa1331650 MtrunA17_Chr2g0306311 42.708 96 50 4 21 113 396 489 8.65e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331650 AT1G18650.1 63.303 109 38 2 4 111 2 109 6.74e-43 143
Msa1331650 AT1G18650.2 62.963 108 38 2 4 110 2 108 3.50e-42 140
Msa1331650 AT5G08000.2 46.703 182 83 4 6 181 22 195 3.43e-37 129
Msa1331650 AT5G61130.1 51.880 133 53 2 20 141 17 149 4.28e-36 126
Msa1331650 AT5G08000.1 48.214 168 73 4 20 181 17 176 8.79e-35 123
Msa1331650 AT4G13600.1 36.408 206 97 6 21 225 58 230 2.84e-31 115
Msa1331650 AT2G03505.4 51.613 93 42 2 20 109 17 109 3.27e-29 107
Msa1331650 AT2G03505.1 51.613 93 42 2 20 109 17 109 3.27e-29 107
Msa1331650 AT2G03505.2 51.613 93 42 2 20 109 17 109 3.27e-29 107
Msa1331650 AT2G03505.3 51.613 93 42 2 20 109 17 109 6.30e-29 105
Msa1331650 AT1G69295.2 51.613 93 45 0 8 100 1 93 1.18e-27 105
Msa1331650 AT1G69295.1 50.526 95 45 1 6 100 5 97 1.93e-26 102
Msa1331650 AT1G26450.1 45.455 143 73 3 6 147 3 141 5.21e-26 100
Msa1331650 AT5G24318.3 47.727 88 45 1 20 106 229 316 2.00e-24 99.0
Msa1331650 AT5G24318.1 47.727 88 45 1 20 106 368 455 3.63e-24 100
Msa1331650 AT2G30933.1 41.964 112 62 3 16 125 74 184 8.67e-24 95.5
Msa1331650 AT1G79480.1 47.191 89 46 1 19 106 306 394 5.54e-23 96.3
Msa1331650 AT1G79480.2 47.191 89 46 1 19 106 305 393 5.95e-23 95.9
Msa1331650 AT5G24318.2 47.619 84 43 1 20 102 368 451 1.12e-22 95.9
Msa1331650 AT1G13830.1 48.864 88 42 2 22 106 19 106 1.45e-22 91.3
Msa1331650 AT1G13830.2 48.864 88 42 2 22 106 33 120 1.57e-22 91.7
Msa1331650 AT1G11820.2 41.739 115 64 3 24 135 381 495 2.02e-22 95.1
Msa1331650 AT2G01630.1 45.455 110 53 3 24 126 360 469 3.48e-22 94.7
Msa1331650 AT4G05430.1 43.299 97 53 2 24 118 23 119 2.09e-21 87.0
Msa1331650 AT4G05430.3 43.299 97 53 2 24 118 48 144 3.25e-21 87.0
Msa1331650 AT4G34480.1 46.067 89 47 1 20 107 360 448 4.93e-21 91.3
Msa1331650 AT4G34480.3 46.067 89 47 1 20 107 249 337 5.06e-21 90.5
Msa1331650 AT2G16230.1 43.011 93 52 1 24 115 366 458 6.70e-21 90.9
Msa1331650 AT2G30933.2 46.078 102 51 4 2 100 59 159 1.12e-20 85.5
Msa1331650 AT2G30933.3 46.078 102 51 4 2 100 59 159 1.12e-20 85.5
Msa1331650 AT4G26830.2 48.276 87 43 2 24 108 371 457 1.62e-20 89.7
Msa1331650 AT4G26830.1 48.276 87 43 2 24 108 367 453 1.72e-20 89.7
Msa1331650 AT2G05790.1 49.425 87 42 2 24 108 384 470 2.02e-20 89.4
Msa1331650 AT1G66250.1 37.607 117 67 3 24 134 368 484 2.10e-20 89.4
Msa1331650 AT5G35740.1 42.424 99 54 3 11 106 17 115 1.47e-19 81.3
Msa1331650 AT3G58100.1 39.623 106 61 3 24 127 41 145 2.36e-19 82.4
Msa1331650 AT4G09464.1 35.780 109 69 1 1 108 8 116 2.38e-19 80.5
Msa1331650 AT4G09467.1 35.780 109 69 1 1 108 8 116 2.38e-19 80.5
Msa1331650 AT4G09465.1 35.780 109 69 1 1 108 8 116 2.45e-19 80.5
Msa1331650 AT1G09460.1 37.000 200 113 7 24 217 137 329 2.80e-19 85.1
Msa1331650 AT5G67460.1 47.059 85 43 2 24 106 293 377 5.28e-19 84.7
Msa1331650 AT5G55180.1 47.126 87 44 2 24 108 372 458 5.63e-19 85.1
Msa1331650 AT4G09462.1 37.383 107 63 2 6 108 8 114 7.53e-19 79.3
Msa1331650 AT2G01630.3 50.000 80 38 2 24 101 360 439 7.81e-19 84.7
Msa1331650 AT3G58100.2 39.623 106 61 3 24 127 117 221 9.24e-19 82.4
Msa1331650 AT1G29380.3 47.778 90 44 3 23 110 147 235 1.53e-18 82.0
Msa1331650 AT4G09466.1 33.945 109 71 1 1 108 8 116 2.05e-18 78.2
Msa1331650 AT4G05430.2 46.835 79 40 2 24 100 48 126 2.11e-18 78.6
Msa1331650 AT1G29380.1 47.674 86 42 3 23 106 147 231 2.22e-18 82.4
Msa1331650 AT4G09090.1 35.780 109 67 2 3 108 8 116 2.26e-18 78.2
Msa1331650 AT1G11820.3 48.101 79 39 2 24 100 381 459 2.72e-18 83.2
Msa1331650 AT4G29360.2 35.246 122 77 2 24 143 401 522 3.21e-18 83.2
Msa1331650 AT4G29360.1 35.246 122 77 2 24 143 391 512 3.46e-18 83.2
Msa1331650 AT3G55430.1 39.560 91 52 2 19 106 359 449 4.97e-18 82.4
Msa1331650 AT1G29380.4 50.000 80 37 3 23 100 147 225 1.24e-17 79.0
Msa1331650 AT1G29380.2 50.000 80 37 3 23 100 147 225 1.24e-17 79.0
Msa1331650 AT1G66852.1 37.838 111 59 5 3 106 2 109 1.59e-17 75.9
Msa1331650 AT5G67460.2 49.367 79 38 2 24 100 293 371 1.67e-17 80.5
Msa1331650 AT5G55180.2 50.633 79 37 2 24 100 372 450 3.09e-17 80.1
Msa1331650 AT3G13560.4 40.708 113 65 2 21 131 359 471 4.03e-17 80.1
Msa1331650 AT3G13560.1 40.708 113 65 2 21 131 359 471 4.03e-17 80.1
Msa1331650 AT3G13560.2 40.708 113 65 2 21 131 359 471 4.03e-17 80.1
Msa1331650 AT3G13560.5 40.708 113 65 2 21 131 359 471 4.03e-17 80.1
Msa1331650 AT3G13560.3 40.708 113 65 2 21 131 359 471 4.03e-17 80.1
Msa1331650 AT2G39640.1 37.634 93 57 1 20 111 456 548 6.22e-17 79.3
Msa1331650 AT2G39640.1 38.542 96 58 1 13 107 348 443 1.14e-15 75.9
Msa1331650 AT2G04910.2 38.776 98 56 3 12 106 3 99 9.47e-17 73.6
Msa1331650 AT5G63240.1 41.573 89 48 2 24 108 40 128 1.91e-16 73.6
Msa1331650 AT1G66870.1 36.697 109 64 3 3 106 2 110 2.34e-16 72.8
Msa1331650 AT5G63225.1 41.489 94 52 2 16 106 15 108 3.00e-16 72.4
Msa1331650 AT5G63230.1 40.476 84 49 1 24 106 26 109 3.79e-16 72.0
Msa1331650 AT1G66870.2 36.190 105 61 3 8 106 33 137 4.74e-16 72.8
Msa1331650 AT1G66855.1 36.893 103 60 4 6 106 11 110 1.86e-15 70.1
Msa1331650 AT2G04910.1 40.659 91 50 3 13 100 4 93 2.06e-15 70.5
Msa1331650 AT5G63250.1 39.175 97 52 3 19 108 34 130 1.20e-14 68.6
Msa1331650 AT5G56590.1 34.579 107 67 3 24 128 369 474 7.69e-14 70.5
Msa1331650 AT2G29735.1 32.110 109 71 2 1 106 8 116 2.47e-13 64.7
Msa1331650 AT4G16165.1 33.333 111 65 4 3 106 2 110 5.06e-13 63.9
Msa1331650 AT1G78520.1 32.203 118 66 4 1 107 1 115 1.37e-12 62.8
Msa1331650 AT2G43670.1 29.661 118 70 3 1 106 1 117 5.82e-12 61.2
Msa1331650 AT3G23770.1 38.462 104 54 3 15 108 370 473 9.69e-12 64.3
Msa1331650 AT5G53600.1 37.500 72 44 1 35 106 41 111 1.04e-11 60.5
Msa1331650 AT5G53610.1 31.532 111 70 3 1 106 1 110 1.45e-11 59.7
Msa1331650 AT4G14080.1 36.782 87 53 2 24 108 389 475 6.97e-11 61.6
Msa1331650 AT2G42930.1 37.209 86 48 3 18 100 34 116 8.05e-11 58.5
Msa1331650 AT3G07320.1 37.931 87 52 2 24 108 371 457 9.34e-11 61.2

Find 128 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGTGATTGTGGTGTTTA+AGG 0.200616 8_4:-51219342 Msa1331650:three_prime_UTR
CAATGAGCTCTAACGGTGTT+TGG 0.235083 8_4:+51222956 None:intergenic
TTTCTGTCTTTATTATGTTT+TGG 0.239738 8_4:-51219619 Msa1331650:CDS
GTAGCAAAAGCCATGTTGTT+AGG 0.285089 8_4:+51223289 None:intergenic
GTGCTTGTTGACCCTTCTTC+TGG 0.287043 8_4:+51222909 None:intergenic
CCACAAGAACTGGCATAATT+AGG 0.299604 8_4:+51219469 None:intergenic
GGCAGTGGTATGGGGCCTTC+TGG 0.300371 8_4:-51219716 Msa1331650:CDS
GCCATGTTGTTAGGGTTAGA+AGG 0.304097 8_4:+51223298 None:intergenic
TCCCATGCCGGTGCCTGTTC+CGG 0.330442 8_4:+51219886 None:intergenic
GACTGAGGTGTGAGAATAAC+AGG 0.340465 8_4:+51223422 None:intergenic
GGTATGGGGCCTTCTGGAGC+TGG 0.348837 8_4:-51219710 Msa1331650:CDS
CCTGTGCCTGTGCCTGTTGA+CGG 0.354038 8_4:+51219857 None:intergenic
CCTAATTATGCCAGTTCTTG+TGG 0.357035 8_4:-51219469 Msa1331650:three_prime_UTR
ATTCATTCGAGAAGCATCTT+TGG 0.359802 8_4:-51219231 Msa1331650:three_prime_UTR
GCCTGTTCCGGTACCTGTTC+CGG 0.362158 8_4:+51219898 None:intergenic
ACCGGCATGGGAACCGGCAC+CGG 0.363255 8_4:-51219797 Msa1331650:CDS
CTGTGCCTGTGCCTGTTGAC+GGG 0.368633 8_4:+51219858 None:intergenic
TGACATATGTAGGTGCTAAT+TGG 0.376958 8_4:-51223087 Msa1331650:intron
ACAGCTCCTGGTGGTGTGTT+AGG 0.379943 8_4:-51219746 Msa1331650:CDS
TGTTAGGCTAGTAATCAGTA+TGG 0.383697 8_4:-51219406 Msa1331650:three_prime_UTR
AAACCAAGCCGACACTGAAC+GGG 0.383747 8_4:-51224578 Msa1331650:five_prime_UTR
ACCAGCACGGGCACTGGCAC+AGG 0.387634 8_4:-51219833 Msa1331650:CDS
TAGAGGGTGAGCAGAGGAGA+AGG 0.389219 8_4:+51223465 None:intergenic
TTGGACTATGCTTGTGGAGC+TGG 0.394023 8_4:-51223022 Msa1331650:CDS
ATCACAATGCCTCATCAAAT+AGG 0.402738 8_4:+51219356 None:intergenic
AATGAGCTCTAACGGTGTTT+GGG 0.405145 8_4:+51222957 None:intergenic
CTAATTATGCCAGTTCTTGT+GGG 0.405712 8_4:-51219468 Msa1331650:three_prime_UTR
CGGTGGGATGATTGATTTGT+TGG 0.407626 8_4:+51224554 None:intergenic
TCTTGATGAGCAGGTGTTAG+TGG 0.412133 8_4:-51222748 Msa1331650:intron
ACCGGAACAGGTACCGGAAC+AGG 0.412489 8_4:-51219899 Msa1331650:CDS
AAAATATAAACATAGATTAG+AGG 0.412614 8_4:+51223448 None:intergenic
GTGAGGTTGAGTTGAGAGAG+AGG 0.416619 8_4:+51223381 None:intergenic
GGAGGTATAGGCAGTGGTAT+GGG 0.420850 8_4:-51219725 Msa1331650:CDS
GCCGGTGCCGGTTCCCATGC+CGG 0.424496 8_4:+51219796 None:intergenic
ATGGGAACCACCCCGTCAAC+AGG 0.424768 8_4:-51219869 Msa1331650:CDS
AATTTAAACCTGGCACTTGA+AGG 0.429774 8_4:+51222715 None:intergenic
GCACTGGCTTGTGACTTTGC+AGG 0.430148 8_4:-51222890 Msa1331650:CDS
CCATCGACAGGTACCGGAAC+AGG 0.430608 8_4:-51219911 Msa1331650:CDS
GGTGGTGTGTTAGGAGGTAT+AGG 0.430692 8_4:-51219737 Msa1331650:CDS
TCCCATGCCGGTGCCCGTGC+TGG 0.433679 8_4:+51219808 None:intergenic
ACGGGCACCGGCATGGGAAC+CGG 0.438524 8_4:-51219803 Msa1331650:CDS
ACAGGCACAGGCACCAGCAC+GGG 0.438656 8_4:-51219845 Msa1331650:CDS
CACAGGCACAGGCACCAGCA+CGG 0.439088 8_4:-51219846 Msa1331650:CDS
GCCTGTGCCAGTGCCCGTGC+TGG 0.440067 8_4:+51219832 None:intergenic
CCGTCAACAGGCACAGGCAC+AGG 0.445509 8_4:-51219857 Msa1331650:CDS
ACAGGCACCAGCACGGGCAC+TGG 0.447382 8_4:-51219839 Msa1331650:CDS
CCAGGAGCTGTTGTACTGTA+TGG 0.447426 8_4:+51219758 None:intergenic
GTGAGCAGAGGAGAAGGGAT+TGG 0.450074 8_4:+51223471 None:intergenic
CACCAGCACGGGCACCGGCA+TGG 0.451856 8_4:-51219810 Msa1331650:CDS
GTGCCTACCCTTCAAGTGCC+AGG 0.455839 8_4:-51222723 Msa1331650:intron
ATGGAAAAGGACTTGGGAAA+TGG 0.456064 8_4:-51219387 Msa1331650:three_prime_UTR
ACTGGCACAGGCACCAGCAC+GGG 0.457127 8_4:-51219821 Msa1331650:CDS
TAGCAAAAGCCATGTTGTTA+GGG 0.462759 8_4:+51223290 None:intergenic
CCTGTTCCGGTACCTGTCGA+TGG 0.464706 8_4:+51219911 None:intergenic
AATCAGTATGGAAAAGGACT+TGG 0.466994 8_4:-51219394 Msa1331650:three_prime_UTR
ATTACCAGTGGCGCCGGTGC+CGG 0.467523 8_4:+51219784 None:intergenic
GCTAGTAATCAGTATGGAAA+AGG 0.472605 8_4:-51219400 Msa1331650:three_prime_UTR
ACCGGAACAGGCACCGGCAT+GGG 0.478543 8_4:-51219887 Msa1331650:CDS
AGGAGGTATAGGCAGTGGTA+TGG 0.479837 8_4:-51219726 Msa1331650:CDS
ACCAGCACGGGCACCGGCAT+GGG 0.486956 8_4:-51219809 Msa1331650:CDS
GGAACCGGCACCGGCGCCAC+TGG 0.490294 8_4:-51219788 Msa1331650:CDS
TGCTTCTCGAATGAATTCAA+TGG 0.491871 8_4:+51219238 None:intergenic
ACCACCCCGTCAACAGGCAC+AGG 0.497935 8_4:-51219863 Msa1331650:CDS
TTGATGAGGCATTGTGATTG+TGG 0.504018 8_4:-51219351 Msa1331650:three_prime_UTR
CACTGGCACAGGCACCAGCA+CGG 0.506011 8_4:-51219822 Msa1331650:CDS
CCATGTTGTTAGGGTTAGAA+GGG 0.506014 8_4:+51223299 None:intergenic
TGACGGGGTGGTTCCCATGC+CGG 0.506240 8_4:+51219874 None:intergenic
GAATAGCTATTACCAGAAGA+AGG 0.510643 8_4:-51222921 Msa1331650:CDS
AGAAGGGAAAGATGAGGTAA+TGG 0.512144 8_4:+51223315 None:intergenic
GAGTTGAGAGAGAGGAGTGG+TGG 0.513182 8_4:+51223389 None:intergenic
TTAGTAGTATATTATGATGA+TGG 0.519316 8_4:-51219572 Msa1331650:three_prime_UTR
ACTTGAAGGAATGGCGGTGA+AGG 0.520742 8_4:+51223240 None:intergenic
AGTTGAGAGAGAGGAGTGGT+GGG 0.524191 8_4:+51223390 None:intergenic
ATGGGGCCTTCTGGAGCTGG+AGG 0.525618 8_4:-51219707 Msa1331650:CDS
ATCATCATAATATACTACTA+AGG 0.527017 8_4:+51219574 None:intergenic
TTGTTGGCCCCGTTCAGTGT+CGG 0.528649 8_4:+51224570 None:intergenic
TGCTAATTGGTGCGTGTGCA+AGG 0.528841 8_4:-51223074 Msa1331650:CDS
ACAGGTACCGGAACAGGTAC+CGG 0.529650 8_4:-51219905 Msa1331650:CDS
CCATACAGTACAACAGCTCC+TGG 0.531703 8_4:-51219758 Msa1331650:CDS
AGAGGGTGAGCAGAGGAGAA+GGG 0.532217 8_4:+51223466 None:intergenic
CTGTTCCGGTACCTGTCGAT+GGG 0.535876 8_4:+51219912 None:intergenic
CCCTTCTAACCCTAACAACA+TGG 0.535980 8_4:-51223299 Msa1331650:exon
AGAGTAGTTACTTGAAGGAA+TGG 0.538541 8_4:+51223231 None:intergenic
ACAAGCCCATCGACAGGTAC+CGG 0.539928 8_4:-51219917 Msa1331650:CDS
ACAGGTACCGGAACAGGCAC+CGG 0.541635 8_4:-51219893 Msa1331650:CDS
AATTGGTGCGTGTGCAAGGA+TGG 0.547293 8_4:-51223070 Msa1331650:CDS
ATTTAAACCTGGCACTTGAA+GGG 0.550247 8_4:+51222716 None:intergenic
CAAACCAAGCCGACACTGAA+CGG 0.551631 8_4:-51224579 Msa1331650:five_prime_UTR
GCCTGTGCCTGTTGACGGGG+TGG 0.552520 8_4:+51219862 None:intergenic
TACCGGAACAGGCACCGGCA+TGG 0.555969 8_4:-51219888 Msa1331650:CDS
CAATGCCTCATCAAATAGGC+GGG 0.565282 8_4:+51219360 None:intergenic
AGCACAACAAGCCCATCGAC+AGG 0.566305 8_4:-51219923 Msa1331650:CDS
GTGTTAGGAGGTATAGGCAG+TGG 0.567121 8_4:-51219731 Msa1331650:CDS
GAGGTATAGGCAGTGGTATG+GGG 0.567753 8_4:-51219724 Msa1331650:CDS
ATCAGTATGGAAAAGGACTT+GGG 0.568805 8_4:-51219393 Msa1331650:three_prime_UTR
TGCAATCTTACAAAAGACCT+TGG 0.568888 8_4:-51223041 Msa1331650:CDS
ACAGGCACCAGCACGGGCAC+CGG 0.570846 8_4:-51219815 Msa1331650:CDS
GAAGAAGGGTCAACAAGCAC+TGG 0.571335 8_4:-51222906 Msa1331650:CDS
AAATATAAACATAGATTAGA+GGG 0.572185 8_4:+51223449 None:intergenic
TGTGCCTGTGCCTGTTGACG+GGG 0.576399 8_4:+51219859 None:intergenic
ACGGTGTTTGGGTTGTAACA+AGG 0.576603 8_4:+51222968 None:intergenic
TCATGGTGGTCTTAGACTTG+TGG 0.577210 8_4:-51219669 Msa1331650:CDS
AAACCTGGCACTTGAAGGGT+AGG 0.578796 8_4:+51222720 None:intergenic
CTTGAAGGAATGGCGGTGAA+GGG 0.580427 8_4:+51223241 None:intergenic
GCTCCTGGTGGTGTGTTAGG+AGG 0.584893 8_4:-51219743 Msa1331650:CDS
TGGAGTATTACCAGTGGCGC+CGG 0.591264 8_4:+51219778 None:intergenic
ATAGCTGCAATGAGCTCTAA+CGG 0.591747 8_4:+51222949 None:intergenic
AATAGCTATTACCAGAAGAA+GGG 0.608399 8_4:-51222920 Msa1331650:CDS
AAGACCTTGGACTATGCTTG+TGG 0.615068 8_4:-51223028 Msa1331650:CDS
TTCATTCCTCCAGCTCCAGA+AGG 0.618676 8_4:+51219701 None:intergenic
ATAGATTAGAGGGTGAGCAG+AGG 0.620238 8_4:+51223459 None:intergenic
TAATAAAGACAGAAAAGAGA+GGG 0.621796 8_4:+51219627 None:intergenic
AGCTCCACAAGCATAGTCCA+AGG 0.629352 8_4:+51223024 None:intergenic
GCAAACCCGCCTATTTGATG+AGG 0.630253 8_4:-51219365 Msa1331650:three_prime_UTR
ACAATGCCTCATCAAATAGG+CGG 0.632685 8_4:+51219359 None:intergenic
CAAGAACTGGCATAATTAGG+TGG 0.634315 8_4:+51219472 None:intergenic
AGGGTTAGAAGGGAAAGATG+AGG 0.646486 8_4:+51223309 None:intergenic
ATAATAAAGACAGAAAAGAG+AGG 0.649627 8_4:+51219626 None:intergenic
AACCAAGCCGACACTGAACG+GGG 0.652052 8_4:-51224577 Msa1331650:five_prime_UTR
ATACCTCCTAACACACCACC+AGG 0.661726 8_4:+51219740 None:intergenic
CGTGGAAGAGCTAAAAGGTG+AGG 0.671038 8_4:+51223364 None:intergenic
GTTGAGTTGAGAGAGAGGAG+TGG 0.671818 8_4:+51223386 None:intergenic
GGAATGAATGATGATAGTCA+TGG 0.689619 8_4:-51219686 Msa1331650:CDS
GTAGTTACTTGAAGGAATGG+CGG 0.700102 8_4:+51223234 None:intergenic
TACAGTACAACAGCTCCTGG+TGG 0.711572 8_4:-51219755 Msa1331650:CDS
GGTGGGTGACAGAGAGACTG+AGG 0.728784 8_4:+51223407 None:intergenic
ACTGTATGGAGTATTACCAG+TGG 0.731514 8_4:+51219772 None:intergenic
ATGAATGATGATAGTCATGG+TGG 0.761282 8_4:-51219683 Msa1331650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATTATGTAAAATAAATT+TGG + chr8_4:51221747-51221766 None:intergenic 10.0%
!!! TCTGAATTTTTTTTTTTTTT+TGG - chr8_4:51221774-51221793 Msa1331650:intron 10.0%
!!! CTGAATTTTTTTTTTTTTTT+GGG - chr8_4:51221775-51221794 Msa1331650:intron 10.0%
!! AAAAAAAACTAAGATCAATT+GGG + chr8_4:51219531-51219550 None:intergenic 15.0%
!! AAAAAAAAACTAAGATCAAT+TGG + chr8_4:51219532-51219551 None:intergenic 15.0%
!! AAATATAAACATAGATTAGA+GGG + chr8_4:51220384-51220403 None:intergenic 15.0%
!! AAAATATAAACATAGATTAG+AGG + chr8_4:51220385-51220404 None:intergenic 15.0%
!!! TTAGCTACAATTATTTTAAA+AGG + chr8_4:51221031-51221050 None:intergenic 15.0%
!!! TTACTTTTGTTTATCATAAT+AGG - chr8_4:51221251-51221270 Msa1331650:intron 15.0%
!!! TACTTTTGTTTATCATAATA+GGG - chr8_4:51221252-51221271 Msa1331650:intron 15.0%
!!! TTTTAAAGATATCTTTTTCA+TGG - chr8_4:51221567-51221586 Msa1331650:intron 15.0%
!! TATACATCAAAAGAATTAAT+GGG - chr8_4:51221719-51221738 Msa1331650:intron 15.0%
!! AAGTAAATTTAATGATTCAT+TGG - chr8_4:51222035-51222054 Msa1331650:intron 15.0%
!!! TTTAAAATTTGTTGATGATA+AGG - chr8_4:51222797-51222816 Msa1331650:intron 15.0%
!!! TTAAAATTTGTTGATGATAA+GGG - chr8_4:51222798-51222817 Msa1331650:intron 15.0%
!! ATCATGAATAAAAGTTTAAT+TGG - chr8_4:51223140-51223159 Msa1331650:intron 15.0%
!! TCATGAATAAAAGTTTAATT+GGG - chr8_4:51223141-51223160 Msa1331650:intron 15.0%
!!! ATACTTTTAACTACTTTTTA+AGG + chr8_4:51223534-51223553 None:intergenic 15.0%
!!! AAAAAGTAGTTAAAAGTATA+TGG - chr8_4:51223535-51223554 Msa1331650:intron 15.0%
!!! GTAGTAAAGTTTTTTGTAAA+CGG + chr8_4:51219299-51219318 None:intergenic 20.0%
!! TTTATAAAACAAAAACAGCA+CGG + chr8_4:51219567-51219586 None:intergenic 20.0%
!! TCAACATGAATGTAATAAAT+AGG + chr8_4:51219836-51219855 None:intergenic 20.0%
!!! ATTCATGTTGAACAAATTTT+TGG - chr8_4:51219845-51219864 Msa1331650:CDS 20.0%
!!! ATTGAAGGTTTTCTTTATAA+TGG - chr8_4:51219925-51219944 Msa1331650:CDS 20.0%
!!! TTGAAGGTTTTCTTTATAAT+GGG - chr8_4:51219926-51219945 Msa1331650:CDS 20.0%
!! AAATTGTTCTTCATTGAATT+TGG - chr8_4:51220035-51220054 Msa1331650:intron 20.0%
!!! AACTTGAATGAAAATTTGTT+TGG - chr8_4:51220137-51220156 Msa1331650:intron 20.0%
!! TAGAGAAAAAAATTTAAACC+TGG + chr8_4:51221128-51221147 None:intergenic 20.0%
!! TTGATATATTCACACAAAAA+AGG - chr8_4:51221302-51221321 Msa1331650:intron 20.0%
!! TGATATATTCACACAAAAAA+GGG - chr8_4:51221303-51221322 Msa1331650:intron 20.0%
!!! ATTTTTTAAGACATTCGAAA+TGG - chr8_4:51221511-51221530 Msa1331650:intron 20.0%
!! GTATACATCAAAAGAATTAA+TGG - chr8_4:51221718-51221737 Msa1331650:intron 20.0%
!! ATACATCAAAAGAATTAATG+GGG - chr8_4:51221720-51221739 Msa1331650:intron 20.0%
!!! TATTTTACATAATGATGATG+CGG - chr8_4:51221751-51221770 Msa1331650:intron 20.0%
!!! TTTTCATTTTACATACATAG+AGG + chr8_4:51221839-51221858 None:intergenic 20.0%
!!! ATTTTCTTTATAACAAAAGC+CGG + chr8_4:51221890-51221909 None:intergenic 20.0%
!!! TTTTTGTATAGTAGTAGTTT+AGG + chr8_4:51222070-51222089 None:intergenic 20.0%
!! TATACAAAAAAGAACTTGAA+AGG - chr8_4:51222080-51222099 Msa1331650:intron 20.0%
!!! TCTTTTCTTTTGAATTGATA+TGG - chr8_4:51222350-51222369 Msa1331650:intron 20.0%
!! AGAAAATAATAAAGTTCACT+TGG + chr8_4:51222443-51222462 None:intergenic 20.0%
!! ATATTCTTATTCCAGAAAAA+AGG + chr8_4:51222515-51222534 None:intergenic 20.0%
!! ATAAAGAAAAAGATCATTCT+TGG + chr8_4:51222555-51222574 None:intergenic 20.0%
!!! CTATTTTGTTTTTGTTAATG+AGG + chr8_4:51223078-51223097 None:intergenic 20.0%
!!! ATAAAAGTTTAATTGGGTTT+TGG - chr8_4:51223147-51223166 Msa1331650:intron 20.0%
!! CATTCAATTAATGATGTATA+TGG - chr8_4:51223291-51223310 Msa1331650:exon 20.0%
!! CTATTATAAGCAAAATTATG+TGG + chr8_4:51223330-51223349 None:intergenic 20.0%
!! TAGCATGAAATCTAAAAATT+AGG - chr8_4:51223478-51223497 Msa1331650:five_prime_UTR 20.0%
!! AAAATTTAATGCCTATGATA+AGG + chr8_4:51223591-51223610 None:intergenic 20.0%
!!! CATTAAATTTTGCGAAATTT+AGG - chr8_4:51223600-51223619 Msa1331650:intron 20.0%
!! TTAAATGTGTAATTATGAGT+TGG + chr8_4:51223812-51223831 None:intergenic 20.0%
!!! TTTCTGTCTTTATTATGTTT+TGG - chr8_4:51224211-51224230 Msa1331650:intron 20.0%
!! ATCATCATAATATACTACTA+AGG + chr8_4:51224259-51224278 None:intergenic 20.0%
!! TTAGTAGTATATTATGATGA+TGG - chr8_4:51224258-51224277 Msa1331650:intron 20.0%
!!! TAAAGTTTTTTGTAAACGGT+GGG + chr8_4:51219295-51219314 None:intergenic 25.0%
!! TTTTGACCATTAGATTAAAG+AGG - chr8_4:51219391-51219410 Msa1331650:three_prime_UTR 25.0%
!!! ATTGGGTTTTGAGAAATTAA+TGG + chr8_4:51219514-51219533 None:intergenic 25.0%
! TTAGATTTATTCAACTTTGC+TGG + chr8_4:51219812-51219831 None:intergenic 25.0%
!!! ACAAATTTTTGGATTTTCGT+CGG - chr8_4:51219856-51219875 Msa1331650:CDS 25.0%
!! ATTGATGAAATGGATTTGTT+TGG - chr8_4:51219975-51219994 Msa1331650:intron 25.0%
!! GTTTCAACAAAAAACTTTTG+AGG + chr8_4:51220120-51220139 None:intergenic 25.0%
! AGTGTGAAAAAAATTCAATG+TGG - chr8_4:51220223-51220242 Msa1331650:intron 25.0%
!! GTGCTCTTTATTTAATCAAA+TGG - chr8_4:51220264-51220283 Msa1331650:intron 25.0%
! GCATTTGAAAAATGAAAAGA+AGG + chr8_4:51220640-51220659 None:intergenic 25.0%
!!! TCTTTTCATTTTTCAAATGC+TGG - chr8_4:51220640-51220659 Msa1331650:intron 25.0%
! AAGGAAAAACAAGAAAGAAA+AGG + chr8_4:51221012-51221031 None:intergenic 25.0%
!! TTGTAGCTAACTCTTTTTAT+TGG - chr8_4:51221041-51221060 Msa1331650:intron 25.0%
!!! TGTGTTTTTGAAGAATCTTA+TGG - chr8_4:51221208-51221227 Msa1331650:intron 25.0%
!!! TAAAGATATCTTTTTCATGG+TGG - chr8_4:51221570-51221589 Msa1331650:intron 25.0%
!! ATTCTTTTGATGTATACGTA+CGG + chr8_4:51221715-51221734 None:intergenic 25.0%
! TACATCAAAAGAATTAATGG+GGG - chr8_4:51221721-51221740 Msa1331650:intron 25.0%
! TATGTAAAATGAAAAAAGCC+AGG - chr8_4:51221844-51221863 Msa1331650:intron 25.0%
!!! TTATTTTGCTTTGATATGTG+TGG - chr8_4:51222152-51222171 Msa1331650:intron 25.0%
!! ATTCAAACTTTAGAAAGCAT+CGG + chr8_4:51222329-51222348 None:intergenic 25.0%
! TTTATTCCTAGAAGAATGAA+AGG - chr8_4:51222570-51222589 Msa1331650:intron 25.0%
! AAATTATAGAAAGTGATGTG+TGG + chr8_4:51222927-51222946 None:intergenic 25.0%
! GTGAAAAAATAATGAATGCA+CGG + chr8_4:51222966-51222985 None:intergenic 25.0%
!! AATTCCTATTACTCCTATTT+TGG - chr8_4:51223044-51223063 Msa1331650:CDS 25.0%
!! ATTCCTATTACTCCTATTTT+GGG - chr8_4:51223045-51223064 Msa1331650:CDS 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG - chr8_4:51223334-51223353 Msa1331650:five_prime_UTR 25.0%
!! AACAATAAGATTTGCTCATT+AGG + chr8_4:51223409-51223428 None:intergenic 25.0%
!! AGGAATTGTTTAAAACATGA+CGG - chr8_4:51223640-51223659 Msa1331650:intron 25.0%
! TTCATATAAAATTGCAACTG+AGG - chr8_4:51223750-51223769 Msa1331650:intron 25.0%
! TCATATAAAATTGCAACTGA+GGG - chr8_4:51223751-51223770 Msa1331650:intron 25.0%
! AGACGCACAATAATAATTTA+AGG + chr8_4:51223847-51223866 None:intergenic 25.0%
! TAATAAAGACAGAAAAGAGA+GGG + chr8_4:51224206-51224225 None:intergenic 25.0%
! ATAATAAAGACAGAAAAGAG+AGG + chr8_4:51224207-51224226 None:intergenic 25.0%
!!! TGTCTTTATTATGTTTTGGT+GGG - chr8_4:51224215-51224234 Msa1331650:intron 25.0%
!!! GTAAAGTTTTTTGTAAACGG+TGG + chr8_4:51219296-51219315 None:intergenic 30.0%
CTTACTAGACACTATACTTA+CGG - chr8_4:51219318-51219337 Msa1331650:three_prime_UTR 30.0%
AAAAAAACCTTTCCCATCAT+GGG + chr8_4:51219375-51219394 None:intergenic 30.0%
! TCGAATTTTCTCTCATGTTT+TGG - chr8_4:51219680-51219699 Msa1331650:CDS 30.0%
AATTGAATTTCGTTCTGTTG+TGG - chr8_4:51219762-51219781 Msa1331650:CDS 30.0%
! CTTCATTGAATTTGGTGAAA+TGG - chr8_4:51220043-51220062 Msa1331650:intron 30.0%
TAAAATCAACTTTCCCATCA+TGG - chr8_4:51220288-51220307 Msa1331650:intron 30.0%
AAAATCAACTTTCCCATCAT+GGG - chr8_4:51220289-51220308 Msa1331650:intron 30.0%
TTAGATAGCAATGAAAAACG+TGG + chr8_4:51220487-51220506 None:intergenic 30.0%
TCTCTAACTTTGACATATGT+AGG - chr8_4:51220733-51220752 Msa1331650:intron 30.0%
AATAGCTATTACCAGAAGAA+GGG - chr8_4:51220910-51220929 Msa1331650:intron 30.0%
GGTGAAAATGAGTATTTACT+TGG + chr8_4:51220991-51221010 None:intergenic 30.0%
AAGAATCTTATGGACAATAG+TGG - chr8_4:51221218-51221237 Msa1331650:intron 30.0%
TAGACAATAGTAGTGTATAG+TGG - chr8_4:51221396-51221415 Msa1331650:intron 30.0%
!! TTGTTTTGCATAGAGGTTAT+TGG - chr8_4:51221453-51221472 Msa1331650:intron 30.0%
! TGTTTTGCATAGAGGTTATT+GGG - chr8_4:51221454-51221473 Msa1331650:intron 30.0%
! CATTTTACATACATAGAGGA+GGG + chr8_4:51221835-51221854 None:intergenic 30.0%
! TCATTTTACATACATAGAGG+AGG + chr8_4:51221836-51221855 None:intergenic 30.0%
TAATCAATTATGTGACCTAC+CGG - chr8_4:51221868-51221887 Msa1331650:intron 30.0%
ACATATTTGCACACAAGATA+GGG + chr8_4:51221926-51221945 None:intergenic 30.0%
TACATATTTGCACACAAGAT+AGG + chr8_4:51221927-51221946 None:intergenic 30.0%
ATACTACATACACGTTGAAT+TGG + chr8_4:51222179-51222198 None:intergenic 30.0%
!!! GTGTTTTAAAAAAAGCCTGA+TGG - chr8_4:51222718-51222737 Msa1331650:intron 30.0%
!! TTTTAAAAAAAGCCTGATGG+AGG - chr8_4:51222721-51222740 Msa1331650:intron 30.0%
TTTAAAAAAAGCCTGATGGA+GGG - chr8_4:51222722-51222741 Msa1331650:intron 30.0%
! ATTGACTTTACGAAAGTTGA+TGG + chr8_4:51222869-51222888 None:intergenic 30.0%
AAAAATAATGAATGCACGGT+TGG + chr8_4:51222962-51222981 None:intergenic 30.0%
!!! GTTTAATTGGGTTTTGGTTT+TGG - chr8_4:51223153-51223172 Msa1331650:intron 30.0%
! GTTTTGCTTATAATAGTGAC+CGG + chr8_4:51223256-51223275 None:intergenic 30.0%
ATTTGCTCATTAGGTTTAGA+TGG + chr8_4:51223400-51223419 None:intergenic 30.0%
TTGTTGATGTGTATGTTCTT+TGG - chr8_4:51223424-51223443 Msa1331650:five_prime_UTR 30.0%
! ATGTGTATGTTCTTTGGTTT+GGG - chr8_4:51223430-51223449 Msa1331650:five_prime_UTR 30.0%
! TTAGGTGACATGTTTTATGA+TGG - chr8_4:51223496-51223515 Msa1331650:intron 30.0%
!! AGCTCTAAAAACCTTATCAT+AGG - chr8_4:51223577-51223596 Msa1331650:intron 30.0%
!! GTAATTATGAGTTGGTTTGT+CGG + chr8_4:51223804-51223823 None:intergenic 30.0%
!!! GTTCCTTTTTTACTAATCAG+TGG - chr8_4:51223874-51223893 Msa1331650:intron 30.0%
! GAACCACTGATTAGTAAAAA+AGG + chr8_4:51223880-51223899 None:intergenic 30.0%
! TTTTTACTAATCAGTGGTTC+AGG - chr8_4:51223880-51223899 Msa1331650:intron 30.0%
!! CTGTCTTTATTATGTTTTGG+TGG - chr8_4:51224214-51224233 Msa1331650:intron 30.0%
!!! GTCTTTATTATGTTTTGGTG+GGG - chr8_4:51224216-51224235 Msa1331650:intron 30.0%
TTCTTGTGGGTTTAAAAAGA+TGG - chr8_4:51224375-51224394 Msa1331650:intron 30.0%
TCTTGTGGGTTTAAAAAGAT+GGG - chr8_4:51224376-51224395 Msa1331650:intron 30.0%
CAAAAAAACCTTTCCCATCA+TGG + chr8_4:51219376-51219395 None:intergenic 35.0%
TGTGCACCTCTTTAATCTAA+TGG + chr8_4:51219400-51219419 None:intergenic 35.0%
AGAAGACAGTGTGAAATATG+TGG + chr8_4:51219446-51219465 None:intergenic 35.0%
AACAAAAACAGCACGGAAAT+TGG + chr8_4:51219560-51219579 None:intergenic 35.0%
!!! TCTCTCATGTTTTGGTGTTT+TGG - chr8_4:51219688-51219707 Msa1331650:CDS 35.0%
TGAGATTCATTGTGAGTTAG+AGG - chr8_4:51219901-51219920 Msa1331650:CDS 35.0%
!! TTGTGAGTTAGAGGTATTGA+AGG - chr8_4:51219910-51219929 Msa1331650:CDS 35.0%
! GGTTTGTTCTTATTCAAGAG+AGG - chr8_4:51219947-51219966 Msa1331650:intron 35.0%
AGAGGCTCATATTGATGAAA+TGG - chr8_4:51219965-51219984 Msa1331650:intron 35.0%
! GATGAAATGGATTTGTTTGG+AGG - chr8_4:51219978-51219997 Msa1331650:intron 35.0%
CAACAATTCTATCTCCTCTA+TGG + chr8_4:51220195-51220214 None:intergenic 35.0%
GTATAGGTGGGATTTAGTAT+GGG + chr8_4:51220330-51220349 None:intergenic 35.0%
AGTATAGGTGGGATTTAGTA+TGG + chr8_4:51220331-51220350 None:intergenic 35.0%
AAAAACGTGGAAGAGCTAAA+AGG + chr8_4:51220474-51220493 None:intergenic 35.0%
TAGCAAAAGCCATGTTGTTA+GGG + chr8_4:51220543-51220562 None:intergenic 35.0%
AGAGTAGTTACTTGAAGGAA+TGG + chr8_4:51220602-51220621 None:intergenic 35.0%
TGGTTAGAGTAGTTACTTGA+AGG + chr8_4:51220607-51220626 None:intergenic 35.0%
GAAAAGAAGGAAGATCTGAA+TGG + chr8_4:51220627-51220646 None:intergenic 35.0%
TGACATATGTAGGTGCTAAT+TGG - chr8_4:51220743-51220762 Msa1331650:intron 35.0%
TGCAATCTTACAAAAGACCT+TGG - chr8_4:51220789-51220808 Msa1331650:intron 35.0%
GAATAGCTATTACCAGAAGA+AGG - chr8_4:51220909-51220928 Msa1331650:intron 35.0%
TCTATTTGTTCTTGATGAGC+AGG - chr8_4:51221073-51221092 Msa1331650:intron 35.0%
ATTTAAACCTGGCACTTGAA+GGG + chr8_4:51221117-51221136 None:intergenic 35.0%
AATTTAAACCTGGCACTTGA+AGG + chr8_4:51221118-51221137 None:intergenic 35.0%
! ACACAAAAAAGGGTTTTCCT+TGG - chr8_4:51221313-51221332 Msa1331650:intron 35.0%
! CACAAAAAAGGGTTTTCCTT+GGG - chr8_4:51221314-51221333 Msa1331650:intron 35.0%
!!! GACATTGTTGTTTTGCATAG+AGG - chr8_4:51221446-51221465 Msa1331650:intron 35.0%
! TGTAGTCTTTTTCTTCCCTA+CGG - chr8_4:51221808-51221827 Msa1331650:intron 35.0%
GGTCACATAATTGATTATCC+TGG + chr8_4:51221865-51221884 None:intergenic 35.0%
TCTTTATAACAAAAGCCGGT+AGG + chr8_4:51221886-51221905 None:intergenic 35.0%
GGCTATAATCACCAATGAAT+GGG + chr8_4:51222253-51222272 None:intergenic 35.0%
! AACTTGTCTTTTGACGATGA+TGG + chr8_4:51222417-51222436 None:intergenic 35.0%
!!! ATCTTGCTTTGCCTTTTTTC+TGG - chr8_4:51222501-51222520 Msa1331650:intron 35.0%
ATTCCTAGAAGAATGAAAGG+TGG - chr8_4:51222573-51222592 Msa1331650:intron 35.0%
ATTCCACCTTTCATTCTTCT+AGG + chr8_4:51222579-51222598 None:intergenic 35.0%
AGTCCCAAAATAGGAGTAAT+AGG + chr8_4:51223051-51223070 None:intergenic 35.0%
TAGTCTCATCAAAACTACCT+TGG - chr8_4:51223095-51223114 Msa1331650:intron 35.0%
!!! TGGTTTTGGTTTGTGTGAAT+AGG - chr8_4:51223167-51223186 Msa1331650:intron 35.0%
GCTTACATGACATACAGTAA+AGG + chr8_4:51223193-51223212 None:intergenic 35.0%
GATGTGTATGTTCTTTGGTT+TGG - chr8_4:51223429-51223448 Msa1331650:five_prime_UTR 35.0%
GTATATGGAAATGTGTAGAC+TGG - chr8_4:51223550-51223569 Msa1331650:intron 35.0%
!!! AGGTGACACGTTTTGAAAAT+AGG - chr8_4:51223620-51223639 Msa1331650:intron 35.0%
GGAATGAATGATGATAGTCA+TGG - chr8_4:51224144-51224163 Msa1331650:intron 35.0%
ATGAATGATGATAGTCATGG+TGG - chr8_4:51224147-51224166 Msa1331650:intron 35.0%
GTGGGGTTAAAAAGATAAAG+CGG - chr8_4:51224233-51224252 Msa1331650:intron 35.0%
CTAATTATGCCAGTTCTTGT+GGG - chr8_4:51224362-51224381 Msa1331650:intron 35.0%
! CTTTTTAAACCCACAAGAAC+TGG + chr8_4:51224374-51224393 None:intergenic 35.0%
TGTTAGGCTAGTAATCAGTA+TGG - chr8_4:51224424-51224443 Msa1331650:intron 35.0%
GCTAGTAATCAGTATGGAAA+AGG - chr8_4:51224430-51224449 Msa1331650:intron 35.0%
AATCAGTATGGAAAAGGACT+TGG - chr8_4:51224436-51224455 Msa1331650:intron 35.0%
ATCAGTATGGAAAAGGACTT+GGG - chr8_4:51224437-51224456 Msa1331650:intron 35.0%
ATCACAATGCCTCATCAAAT+AGG + chr8_4:51224477-51224496 None:intergenic 35.0%
CATTGTGATTGTGGTGTTTA+AGG - chr8_4:51224488-51224507 Msa1331650:intron 35.0%
TGCTTCTCGAATGAATTCAA+TGG + chr8_4:51224595-51224614 None:intergenic 35.0%
ACTAGACACTATACTTACGG+TGG - chr8_4:51219321-51219340 Msa1331650:three_prime_UTR 40.0%
CTAGACACTATACTTACGGT+GGG - chr8_4:51219322-51219341 Msa1331650:three_prime_UTR 40.0%
! GAGGTGCACACATTTTATGA+TGG - chr8_4:51219410-51219429 Msa1331650:three_prime_UTR 40.0%
CAGTGTGAAATATGTGGTGT+GGG + chr8_4:51219440-51219459 None:intergenic 40.0%
ACAGTGTGAAATATGTGGTG+TGG + chr8_4:51219441-51219460 None:intergenic 40.0%
!!! GGTTTTTGAAGCGAGAAATC+TGG + chr8_4:51219493-51219512 None:intergenic 40.0%
! GATTTTCGTCGGATCTTGTA+CGG - chr8_4:51219867-51219886 Msa1331650:CDS 40.0%
TTGTTTGGAGGAGAATTGCT+TGG - chr8_4:51219990-51220009 Msa1331650:intron 40.0%
TTTGTTTGGAGAAGAGTTGC+TGG - chr8_4:51220151-51220170 Msa1331650:intron 40.0%
GTGGGATTTAGTATGGGAAA+GGG + chr8_4:51220324-51220343 None:intergenic 40.0%
TGGTGTGTGTAAGTATAGGT+GGG + chr8_4:51220342-51220361 None:intergenic 40.0%
TTGGTGTGTGTAAGTATAGG+TGG + chr8_4:51220343-51220362 None:intergenic 40.0%
! GGATTGGTGTGTGTAAGTAT+AGG + chr8_4:51220346-51220365 None:intergenic 40.0%
AGAAGGGAAAGATGAGGTAA+TGG + chr8_4:51220518-51220537 None:intergenic 40.0%
CCATGTTGTTAGGGTTAGAA+GGG + chr8_4:51220534-51220553 None:intergenic 40.0%
GTAGCAAAAGCCATGTTGTT+AGG + chr8_4:51220544-51220563 None:intergenic 40.0%
GTAGTTACTTGAAGGAATGG+CGG + chr8_4:51220599-51220618 None:intergenic 40.0%
! AATGAGCTCTAACGGTGTTT+GGG + chr8_4:51220876-51220895 None:intergenic 40.0%
! ATAGCTGCAATGAGCTCTAA+CGG + chr8_4:51220884-51220903 None:intergenic 40.0%
! AAAAGGGTTTTCCTTGGGTT+AGG - chr8_4:51221319-51221338 Msa1331650:intron 40.0%
TTTGCATAGAGGTTATTGGG+AGG - chr8_4:51221457-51221476 Msa1331650:intron 40.0%
TTGTGTCATCTCTGTCTGTT+TGG - chr8_4:51221620-51221639 Msa1331650:intron 40.0%
AGTAGTAGTTTAGGTCAGAC+AGG + chr8_4:51222061-51222080 None:intergenic 40.0%
ATTGGAAACGTCATCACGAT+AGG + chr8_4:51222224-51222243 None:intergenic 40.0%
CCAATGAATGGGCACTAAAT+TGG + chr8_4:51222242-51222261 None:intergenic 40.0%
CCAATTTAGTGCCCATTCAT+TGG - chr8_4:51222239-51222258 Msa1331650:intron 40.0%
CGGCTATAATCACCAATGAA+TGG + chr8_4:51222254-51222273 None:intergenic 40.0%
AACTCAGAATTACCCATGAC+CGG + chr8_4:51222779-51222798 None:intergenic 40.0%
TGAGGCTTAAGTCCCAAAAT+AGG + chr8_4:51223060-51223079 None:intergenic 40.0%
AAGAAATCAAGAACCAGCCA+AGG + chr8_4:51223115-51223134 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr8_4:51223338-51223357 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr8_4:51223337-51223356 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr8_4:51223337-51223356 Msa1331650:five_prime_UTR 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr8_4:51223338-51223357 Msa1331650:five_prime_UTR 40.0%
! ACTGTATGGAGTATTACCAG+TGG + chr8_4:51224061-51224080 None:intergenic 40.0%
CAAGAACTGGCATAATTAGG+TGG + chr8_4:51224361-51224380 None:intergenic 40.0%
CCACAAGAACTGGCATAATT+AGG + chr8_4:51224364-51224383 None:intergenic 40.0%
CCTAATTATGCCAGTTCTTG+TGG - chr8_4:51224361-51224380 Msa1331650:intron 40.0%
ATGGAAAAGGACTTGGGAAA+TGG - chr8_4:51224443-51224462 Msa1331650:intron 40.0%
ACAATGCCTCATCAAATAGG+CGG + chr8_4:51224474-51224493 None:intergenic 40.0%
!! TTGATGAGGCATTGTGATTG+TGG - chr8_4:51224479-51224498 Msa1331650:intron 40.0%
!! CGGTGGGATGATTGATTTGT+TGG + chr8_4:51219279-51219298 None:intergenic 45.0%
ACTTACGGTGGGATTTAGCA+TGG - chr8_4:51219333-51219352 Msa1331650:three_prime_UTR 45.0%
CTTACGGTGGGATTTAGCAT+GGG - chr8_4:51219334-51219353 Msa1331650:three_prime_UTR 45.0%
GTGGGATTTAGCATGGGAAA+GGG - chr8_4:51219340-51219359 Msa1331650:three_prime_UTR 45.0%
! AGGGAAGTTGTTTCCCATGA+TGG - chr8_4:51219359-51219378 Msa1331650:three_prime_UTR 45.0%
! GGGAAGTTGTTTCCCATGAT+GGG - chr8_4:51219360-51219379 Msa1331650:three_prime_UTR 45.0%
! GTTGTTTCCCATGATGGGAA+AGG - chr8_4:51219365-51219384 Msa1331650:three_prime_UTR 45.0%
TTGGAGGAGAATTGCTTGGT+AGG - chr8_4:51219994-51220013 Msa1331650:intron 45.0%
! GGGAAGTTGTTTCCCATGAT+GGG + chr8_4:51219360-51219379 None:intergenic 45.0%
! AGGGAAGTTGTTTCCCATGA+TGG + chr8_4:51219359-51219378 None:intergenic 45.0%
GGTGGGATTTAGTATGGGAA+AGG + chr8_4:51220325-51220344 None:intergenic 45.0%
ATAGATTAGAGGGTGAGCAG+AGG + chr8_4:51220374-51220393 None:intergenic 45.0%
GACTGAGGTGTGAGAATAAC+AGG + chr8_4:51220411-51220430 None:intergenic 45.0%
AGGGTTAGAAGGGAAAGATG+AGG + chr8_4:51220524-51220543 None:intergenic 45.0%
CCCTTCTAACCCTAACAACA+TGG - chr8_4:51220531-51220550 Msa1331650:intron 45.0%
GCCATGTTGTTAGGGTTAGA+AGG + chr8_4:51220535-51220554 None:intergenic 45.0%
AAGACCTTGGACTATGCTTG+TGG - chr8_4:51220802-51220821 Msa1331650:intron 45.0%
!!! AAGGAGCGTTTTGACGAAGA+GGG + chr8_4:51220846-51220865 None:intergenic 45.0%
!! ACGGTGTTTGGGTTGTAACA+AGG + chr8_4:51220865-51220884 None:intergenic 45.0%
! CAATGAGCTCTAACGGTGTT+TGG + chr8_4:51220877-51220896 None:intergenic 45.0%
TCTTGATGAGCAGGTGTTAG+TGG - chr8_4:51221082-51221101 Msa1331650:intron 45.0%
TCATCTCTGTCTGTTTGGCA+TGG - chr8_4:51221625-51221644 Msa1331650:intron 45.0%
AGAACACAGACTCACTGCAA+CGG + chr8_4:51222274-51222293 None:intergenic 45.0%
GCACCACTACTACTGAAACA+AGG - chr8_4:51222384-51222403 Msa1331650:intron 45.0%
!! GAGCCTTGTTTCAGTAGTAG+TGG + chr8_4:51222390-51222409 None:intergenic 45.0%
AATATACCGTCACCGGTCAT+GGG - chr8_4:51222764-51222783 Msa1331650:intron 45.0%
GAGTCAAGTGTCTGTTGATC+AGG + chr8_4:51222836-51222855 None:intergenic 45.0%
! CAGACACTTGACTCGATATC+TGG - chr8_4:51222842-51222861 Msa1331650:intron 45.0%
TTGGTCATGCACGAACATCA+AGG + chr8_4:51222896-51222915 None:intergenic 45.0%
GTGATGTGTGGTAGCACAAT+TGG + chr8_4:51222915-51222934 None:intergenic 45.0%
CTCATCAAAACTACCTTGGC+TGG - chr8_4:51223099-51223118 Msa1331650:intron 45.0%
TGTACTCTCTACTCAGCTGA+AGG + chr8_4:51223229-51223248 None:intergenic 45.0%
! TCATGGTGGTCTTAGACTTG+TGG - chr8_4:51224161-51224180 Msa1331650:intron 45.0%
CAATGCCTCATCAAATAGGC+GGG + chr8_4:51224473-51224492 None:intergenic 45.0%
!! TAAAAAAAAATATAATGAAT+TGG + chr8_4:51221972-51221991 None:intergenic 5.0%
!!! AATTAATTAATTATTTTGTT+AGG - chr8_4:51224408-51224427 Msa1331650:intron 5.0%
CAAACCAAGCCGACACTGAA+CGG - chr8_4:51219251-51219270 Msa1331650:three_prime_UTR 50.0%
AAACCAAGCCGACACTGAAC+GGG - chr8_4:51219252-51219271 Msa1331650:three_prime_UTR 50.0%
GGTGGGATTTAGCATGGGAA+AGG - chr8_4:51219339-51219358 Msa1331650:three_prime_UTR 50.0%
TCACACTGTCTTCTCCATCC+TGG - chr8_4:51219452-51219471 Msa1331650:three_prime_UTR 50.0%
! TCTGAAACAGTGAGCCAGGA+TGG + chr8_4:51219469-51219488 None:intergenic 50.0%
! TGGATCTGAAACAGTGAGCC+AGG + chr8_4:51219473-51219492 None:intergenic 50.0%
TTGCTTGGTAGGAGAGTTGC+TGG - chr8_4:51220005-51220024 Msa1331650:intron 50.0%
TTGGTAGGAGAGTTGCTGGT+AGG - chr8_4:51220009-51220028 Msa1331650:intron 50.0%
GGTTAGTGAGAGAGCCATAG+AGG - chr8_4:51220178-51220197 Msa1331650:intron 50.0%
AGTTGAGAGAGAGGAGTGGT+GGG + chr8_4:51220443-51220462 None:intergenic 50.0%
!! GTTGAGTTGAGAGAGAGGAG+TGG + chr8_4:51220447-51220466 None:intergenic 50.0%
!! GTGAGGTTGAGTTGAGAGAG+AGG + chr8_4:51220452-51220471 None:intergenic 50.0%
CGTGGAAGAGCTAAAAGGTG+AGG + chr8_4:51220469-51220488 None:intergenic 50.0%
CTTGAAGGAATGGCGGTGAA+GGG + chr8_4:51220592-51220611 None:intergenic 50.0%
ACTTGAAGGAATGGCGGTGA+AGG + chr8_4:51220593-51220612 None:intergenic 50.0%
TGCTAATTGGTGCGTGTGCA+AGG - chr8_4:51220756-51220775 Msa1331650:intron 50.0%
AATTGGTGCGTGTGCAAGGA+TGG - chr8_4:51220760-51220779 Msa1331650:intron 50.0%
AGCTCCACAAGCATAGTCCA+AGG + chr8_4:51220809-51220828 None:intergenic 50.0%
TTGGACTATGCTTGTGGAGC+TGG - chr8_4:51220808-51220827 Msa1331650:intron 50.0%
!!! CAAGGAGCGTTTTGACGAAG+AGG + chr8_4:51220847-51220866 None:intergenic 50.0%
! GTGCTTGTTGACCCTTCTTC+TGG + chr8_4:51220924-51220943 None:intergenic 50.0%
GAAGAAGGGTCAACAAGCAC+TGG - chr8_4:51220924-51220943 Msa1331650:intron 50.0%
AAACCTGGCACTTGAAGGGT+AGG + chr8_4:51221113-51221132 None:intergenic 50.0%
!! AGGGTTTTCCTTGGGTTAGG+TGG - chr8_4:51221322-51221341 Msa1331650:intron 50.0%
!! GGGTTTTCCTTGGGTTAGGT+GGG - chr8_4:51221323-51221342 Msa1331650:intron 50.0%
!! GGTTTTCCTTGGGTTAGGTG+GGG - chr8_4:51221324-51221343 Msa1331650:intron 50.0%
GTGGGGACATGCTTTGCAAT+AGG - chr8_4:51221341-51221360 Msa1331650:intron 50.0%
TACATAGAGGAGGGACCGTA+GGG + chr8_4:51221826-51221845 None:intergenic 50.0%
ATACATAGAGGAGGGACCGT+AGG + chr8_4:51221827-51221846 None:intergenic 50.0%
! AAGCCTGATGGAGGGAGTAT+TGG - chr8_4:51222730-51222749 Msa1331650:CDS 50.0%
ACTCCAATACTCCCTCCATC+AGG + chr8_4:51222736-51222755 None:intergenic 50.0%
!! TGGAGGGAGTATTGGAGTAC+TGG - chr8_4:51222738-51222757 Msa1331650:CDS 50.0%
!! GGAGGGAGTATTGGAGTACT+GGG - chr8_4:51222739-51222758 Msa1331650:intron 50.0%
! CATGACCGGTGACGGTATAT+TGG + chr8_4:51222765-51222784 None:intergenic 50.0%
CAATATACCGTCACCGGTCA+TGG - chr8_4:51222763-51222782 Msa1331650:intron 50.0%
GAATTACCCATGACCGGTGA+CGG + chr8_4:51222773-51222792 None:intergenic 50.0%
! TGAGTAGAGAGTACACCCTC+CGG - chr8_4:51223234-51223253 Msa1331650:intron 50.0%
AGCCTAGTACATACACCCTC+CGG + chr8_4:51223356-51223375 None:intergenic 50.0%
CCAGGAGCTGTTGTACTGTA+TGG + chr8_4:51224075-51224094 None:intergenic 50.0%
CCATACAGTACAACAGCTCC+TGG - chr8_4:51224072-51224091 Msa1331650:intron 50.0%
TACAGTACAACAGCTCCTGG+TGG - chr8_4:51224075-51224094 Msa1331650:intron 50.0%
ATACCTCCTAACACACCACC+AGG + chr8_4:51224093-51224112 None:intergenic 50.0%
! GGTGGTGTGTTAGGAGGTAT+AGG - chr8_4:51224093-51224112 Msa1331650:intron 50.0%
! GTGTTAGGAGGTATAGGCAG+TGG - chr8_4:51224099-51224118 Msa1331650:intron 50.0%
! AGGAGGTATAGGCAGTGGTA+TGG - chr8_4:51224104-51224123 Msa1331650:intron 50.0%
! GGAGGTATAGGCAGTGGTAT+GGG - chr8_4:51224105-51224124 Msa1331650:intron 50.0%
GAGGTATAGGCAGTGGTATG+GGG - chr8_4:51224106-51224125 Msa1331650:intron 50.0%
TTCATTCCTCCAGCTCCAGA+AGG + chr8_4:51224132-51224151 None:intergenic 50.0%
GCAAACCCGCCTATTTGATG+AGG - chr8_4:51224465-51224484 Msa1331650:intron 50.0%
AACCAAGCCGACACTGAACG+GGG - chr8_4:51219253-51219272 Msa1331650:three_prime_UTR 55.0%
TTGTTGGCCCCGTTCAGTGT+CGG + chr8_4:51219263-51219282 None:intergenic 55.0%
TGGAGAAGAGTTGCTGGTCG+TGG - chr8_4:51220157-51220176 Msa1331650:intron 55.0%
GTGAGCAGAGGAGAAGGGAT+TGG + chr8_4:51220362-51220381 None:intergenic 55.0%
AGAGGGTGAGCAGAGGAGAA+GGG + chr8_4:51220367-51220386 None:intergenic 55.0%
TAGAGGGTGAGCAGAGGAGA+AGG + chr8_4:51220368-51220387 None:intergenic 55.0%
GAGTTGAGAGAGAGGAGTGG+TGG + chr8_4:51220444-51220463 None:intergenic 55.0%
!! GCACTGGCTTGTGACTTTGC+AGG - chr8_4:51220940-51220959 Msa1331650:intron 55.0%
CTGGGCCAATATACCGTCAC+CGG - chr8_4:51222757-51222776 Msa1331650:intron 55.0%
! GACCGGAGGGTGTATGTACT+AGG - chr8_4:51223351-51223370 Msa1331650:five_prime_UTR 55.0%
AGCACAACAAGCCCATCGAC+AGG - chr8_4:51223907-51223926 Msa1331650:intron 55.0%
ACAAGCCCATCGACAGGTAC+CGG - chr8_4:51223913-51223932 Msa1331650:intron 55.0%
CTGTTCCGGTACCTGTCGAT+GGG + chr8_4:51223921-51223940 None:intergenic 55.0%
!! ACAGGTACCGGAACAGGTAC+CGG - chr8_4:51223925-51223944 Msa1331650:intron 55.0%
! TGGAGTATTACCAGTGGCGC+CGG + chr8_4:51224055-51224074 None:intergenic 55.0%
! ACAGCTCCTGGTGGTGTGTT+AGG - chr8_4:51224084-51224103 Msa1331650:intron 55.0%
GGTGGGTGACAGAGAGACTG+AGG + chr8_4:51220426-51220445 None:intergenic 60.0%
GTGCCTACCCTTCAAGTGCC+AGG - chr8_4:51221107-51221126 Msa1331650:intron 60.0%
GCATGTCCCCACCTAACCCA+AGG + chr8_4:51221333-51221352 None:intergenic 60.0%
CCTGTTCCGGTACCTGTCGA+TGG + chr8_4:51223922-51223941 None:intergenic 60.0%
!! CCATCGACAGGTACCGGAAC+AGG - chr8_4:51223919-51223938 Msa1331650:intron 60.0%
!! ACCGGAACAGGTACCGGAAC+AGG - chr8_4:51223931-51223950 Msa1331650:intron 60.0%
GCCTGTTCCGGTACCTGTTC+CGG + chr8_4:51223935-51223954 None:intergenic 60.0%
!! ACAGGTACCGGAACAGGCAC+CGG - chr8_4:51223937-51223956 Msa1331650:intron 60.0%
ATGGGAACCACCCCGTCAAC+AGG - chr8_4:51223961-51223980 Msa1331650:intron 60.0%
TGTGCCTGTGCCTGTTGACG+GGG + chr8_4:51223974-51223993 None:intergenic 60.0%
CTGTGCCTGTGCCTGTTGAC+GGG + chr8_4:51223975-51223994 None:intergenic 60.0%
CCTGTGCCTGTGCCTGTTGA+CGG + chr8_4:51223976-51223995 None:intergenic 60.0%
! GCTCCTGGTGGTGTGTTAGG+AGG - chr8_4:51224087-51224106 Msa1331650:intron 60.0%
!! TACCGGAACAGGCACCGGCA+TGG - chr8_4:51223942-51223961 Msa1331650:intron 65.0%
!! ACCGGAACAGGCACCGGCAT+GGG - chr8_4:51223943-51223962 Msa1331650:intron 65.0%
TCCCATGCCGGTGCCTGTTC+CGG + chr8_4:51223947-51223966 None:intergenic 65.0%
TGACGGGGTGGTTCCCATGC+CGG + chr8_4:51223959-51223978 None:intergenic 65.0%
ACCACCCCGTCAACAGGCAC+AGG - chr8_4:51223967-51223986 Msa1331650:intron 65.0%
CCGTCAACAGGCACAGGCAC+AGG - chr8_4:51223973-51223992 Msa1331650:intron 65.0%
CACAGGCACAGGCACCAGCA+CGG - chr8_4:51223984-51224003 Msa1331650:intron 65.0%
ACAGGCACAGGCACCAGCAC+GGG - chr8_4:51223985-51224004 Msa1331650:intron 65.0%
CACTGGCACAGGCACCAGCA+CGG - chr8_4:51224008-51224027 Msa1331650:intron 65.0%
ACTGGCACAGGCACCAGCAC+GGG - chr8_4:51224009-51224028 Msa1331650:intron 65.0%
!! ATTACCAGTGGCGCCGGTGC+CGG + chr8_4:51224049-51224068 None:intergenic 65.0%
GGCAGTGGTATGGGGCCTTC+TGG - chr8_4:51224114-51224133 Msa1331650:intron 65.0%
!! GGTATGGGGCCTTCTGGAGC+TGG - chr8_4:51224120-51224139 Msa1331650:intron 65.0%
!! ATGGGGCCTTCTGGAGCTGG+AGG - chr8_4:51224123-51224142 Msa1331650:intron 65.0%
!! GGCCCCGTTCAGTGTCGGCT+TGG + chr8_4:51219258-51219277 None:intergenic 70.0%
GCCTGTGCCTGTTGACGGGG+TGG + chr8_4:51223971-51223990 None:intergenic 70.0%
ACAGGCACCAGCACGGGCAC+TGG - chr8_4:51223991-51224010 Msa1331650:intron 70.0%
!! ACCAGCACGGGCACTGGCAC+AGG - chr8_4:51223997-51224016 Msa1331650:intron 70.0%
ACAGGCACCAGCACGGGCAC+CGG - chr8_4:51223991-51224010 Msa1331650:intron 70.0%
!! ACCAGCACGGGCACCGGCAT+GGG - chr8_4:51224021-51224040 Msa1331650:intron 70.0%
!! ACGGGCACCGGCATGGGAAC+CGG - chr8_4:51224027-51224046 Msa1331650:intron 70.0%
ACCGGCATGGGAACCGGCAC+CGG - chr8_4:51224033-51224052 Msa1331650:intron 70.0%
GCCTGTGCCAGTGCCCGTGC+TGG + chr8_4:51224001-51224020 None:intergenic 75.0%
!! CACCAGCACGGGCACCGGCA+TGG - chr8_4:51224020-51224039 Msa1331650:intron 75.0%
TCCCATGCCGGTGCCCGTGC+TGG + chr8_4:51224025-51224044 None:intergenic 75.0%
!! GCCGGTGCCGGTTCCCATGC+CGG + chr8_4:51224037-51224056 None:intergenic 75.0%
!!! GGAACCGGCACCGGCGCCAC+TGG - chr8_4:51224042-51224061 Msa1331650:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 51219231 51224621 51219231 ID=Msa1331650;Name=Msa1331650
chr8_4 mRNA 51219231 51224621 51219231 ID=Msa1331650-mRNA-1;Parent=Msa1331650;Name=Msa1331650-mRNA-1;_AED=0.05;_eAED=0.05;_QI=304|1|1|1|0.75|0.6|5|379|226
chr8_4 exon 51219231 51219958 51219231 ID=Msa1331650-mRNA-1:exon:15116;Parent=Msa1331650-mRNA-1
chr8_4 exon 51222724 51222757 51222724 ID=Msa1331650-mRNA-1:exon:15115;Parent=Msa1331650-mRNA-1
chr8_4 exon 51222861 51223097 51222861 ID=Msa1331650-mRNA-1:exon:15114;Parent=Msa1331650-mRNA-1
chr8_4 exon 51223242 51223502 51223242 ID=Msa1331650-mRNA-1:exon:15113;Parent=Msa1331650-mRNA-1
chr8_4 exon 51224518 51224621 51224518 ID=Msa1331650-mRNA-1:exon:15112;Parent=Msa1331650-mRNA-1
chr8_4 five_prime_UTR 51224518 51224621 51224518 ID=Msa1331650-mRNA-1:five_prime_utr;Parent=Msa1331650-mRNA-1
chr8_4 five_prime_UTR 51223303 51223502 51223303 ID=Msa1331650-mRNA-1:five_prime_utr;Parent=Msa1331650-mRNA-1
chr8_4 CDS 51223242 51223302 51223242 ID=Msa1331650-mRNA-1:cds;Parent=Msa1331650-mRNA-1
chr8_4 CDS 51222861 51223097 51222861 ID=Msa1331650-mRNA-1:cds;Parent=Msa1331650-mRNA-1
chr8_4 CDS 51222724 51222757 51222724 ID=Msa1331650-mRNA-1:cds;Parent=Msa1331650-mRNA-1
chr8_4 CDS 51219610 51219958 51219610 ID=Msa1331650-mRNA-1:cds;Parent=Msa1331650-mRNA-1
chr8_4 three_prime_UTR 51219231 51219609 51219231 ID=Msa1331650-mRNA-1:three_prime_utr;Parent=Msa1331650-mRNA-1
Gene Sequence

>Msa1331650

ATGGCTTTTGCTACTCTTGCTCTTGTACTTCTTCTTTTGCCCTTCACCGCCATTCCTTCAAGTGCTAATTGGTGCGTGTGCAAGGATGGAGCTGATGCAATCTTACAAAAGACCTTGGACTATGCTTGTGGAGCTGGAGCTGACTGTAACCCTCTTCGTCAAAACGCTCCTTGTTACAACCCAAACACCGTTAGAGCTCATTGCAGCTATGCTGTGAATAGCTATTACCAGAAGAAGGGTCAACAAGCACTGGCTTGTGACTTTGCAGGAACAGCTACTGTTGTTACATCTGATCCAAGTGTTAGTGGCTGTGCCTACCCTTCAAGTGCCAGTGGTTCAGGCACTAGCACAACAAGCCCATCGACAGGTACCGGAACAGGTACCGGAACAGGCACCGGCATGGGAACCACCCCGTCAACAGGCACAGGCACAGGCACCAGCACGGGCACTGGCACAGGCACCAGCACGGGCACCGGCATGGGAACCGGCACCGGCGCCACTGGTAATACTCCATACAGTACAACAGCTCCTGGTGGTGTGTTAGGAGGTATAGGCAGTGGTATGGGGCCTTCTGGAGCTGGAGGAATGAATGATGATAGTCATGGTGGTCTTAGACTTGTGGACACTAGTTTCTTATCAATCCCTCTCTTTTCTGTCTTTATTATGTTTTGGTGGGGTTAA
Protein sequence

>Msa1331650

MAFATLALVLLLLPFTAIPSSANWCVCKDGADAILQKTLDYACGAGADCNPLRQNAPCYNPNTVRAHCSYAVNSYYQKKGQQALACDFAGTATVVTSDPSVSGCAYPSSASGSGTSTTSPSTGTGTGTGTGTGMGTTPSTGTGTGTSTGTGTGTSTGTGMGTGTGATGNTPYSTTAPGGVLGGIGSGMGPSGAGGMNDDSHGGLRLVDTSFLSIPLFSVFIMFWWG*