Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643120 | XP_024637349.1 | 91.160 | 543 | 27 | 5 | 1 | 542 | 1 | 523 | 0.0 | 965 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643120 | A0A396I7N5 | 91.160 | 543 | 27 | 5 | 1 | 542 | 1 | 523 | 0.0 | 965 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0643120 | Msa0643140 | 0.801459 | 8.914316e-49 | -8.615850e-47 |
| Msa0643120 | Msa0682820 | 0.807923 | 3.987690e-50 | -8.615850e-47 |
| Msa0547290 | Msa0643120 | 0.813333 | 2.698729e-51 | -8.615850e-47 |
| Msa0602020 | Msa0643120 | 0.806044 | 9.959720e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643120 | MtrunA17_Chr4g0029221 | 91.160 | 543 | 27 | 5 | 1 | 542 | 1 | 523 | 0.0 | 965 |
| Msa0643120 | MtrunA17_Chr2g0326551 | 56.364 | 550 | 173 | 16 | 10 | 542 | 3 | 502 | 0.0 | 536 |
| Msa0643120 | MtrunA17_Chr1g0181371 | 48.611 | 504 | 211 | 12 | 41 | 535 | 34 | 498 | 1.44e-145 | 428 |
| Msa0643120 | MtrunA17_Chr3g0120281 | 46.512 | 430 | 187 | 10 | 87 | 496 | 37 | 443 | 2.01e-114 | 347 |
| Msa0643120 | MtrunA17_Chr2g0286611 | 36.111 | 396 | 187 | 11 | 115 | 492 | 58 | 405 | 9.97e-66 | 219 |
| Msa0643120 | MtrunA17_Chr7g0246271 | 38.503 | 187 | 84 | 3 | 274 | 459 | 45 | 201 | 1.65e-29 | 115 |
| Msa0643120 | MtrunA17_Chr7g0246251 | 32.051 | 234 | 101 | 5 | 292 | 498 | 1 | 203 | 2.26e-26 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643120 | AT5G60580.1 | 57.347 | 490 | 163 | 13 | 1 | 488 | 1 | 446 | 1.65e-165 | 479 |
| Msa0643120 | AT5G60580.3 | 57.347 | 490 | 163 | 13 | 1 | 488 | 1 | 446 | 1.65e-165 | 479 |
| Msa0643120 | AT5G60580.4 | 56.137 | 497 | 165 | 13 | 1 | 488 | 1 | 453 | 1.17e-162 | 472 |
| Msa0643120 | AT5G60580.2 | 56.137 | 497 | 165 | 13 | 1 | 488 | 1 | 453 | 1.17e-162 | 472 |
| Msa0643120 | AT3G09760.1 | 44.882 | 508 | 207 | 16 | 4 | 493 | 9 | 461 | 1.11e-122 | 369 |
| Msa0643120 | AT5G03180.2 | 44.111 | 467 | 207 | 16 | 37 | 493 | 29 | 451 | 1.29e-106 | 327 |
| Msa0643120 | AT5G03180.1 | 43.991 | 466 | 205 | 16 | 37 | 493 | 29 | 447 | 5.05e-106 | 326 |
| Msa0643120 | AT5G03180.4 | 44.150 | 453 | 199 | 16 | 51 | 493 | 8 | 416 | 4.47e-105 | 322 |
| Msa0643120 | AT5G03180.3 | 43.781 | 402 | 175 | 15 | 37 | 431 | 29 | 386 | 1.18e-80 | 258 |
| Msa0643120 | AT5G03180.5 | 43.641 | 401 | 173 | 15 | 37 | 431 | 29 | 382 | 3.86e-80 | 257 |
| Msa0643120 | AT3G06330.4 | 39.577 | 331 | 165 | 7 | 165 | 494 | 11 | 307 | 1.20e-63 | 211 |
| Msa0643120 | AT3G06330.1 | 37.302 | 378 | 197 | 8 | 118 | 494 | 80 | 418 | 3.86e-63 | 213 |
| Msa0643120 | AT3G06330.2 | 43.210 | 243 | 120 | 3 | 252 | 494 | 25 | 249 | 7.04e-58 | 194 |
| Msa0643120 | AT5G18760.1 | 37.719 | 342 | 160 | 12 | 148 | 479 | 90 | 388 | 1.90e-46 | 168 |
| Msa0643120 | AT3G06330.3 | 39.924 | 263 | 123 | 7 | 165 | 426 | 122 | 350 | 3.31e-41 | 152 |
| Msa0643120 | AT5G18760.2 | 38.636 | 264 | 111 | 11 | 148 | 402 | 90 | 311 | 3.92e-31 | 124 |
| Msa0643120 | AT2G37950.1 | 45.205 | 73 | 36 | 2 | 259 | 330 | 70 | 139 | 4.22e-12 | 65.9 |
| Msa0643120 | AT5G05830.1 | 45.000 | 80 | 39 | 2 | 269 | 344 | 72 | 150 | 5.18e-12 | 65.9 |
Find 119 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCACTTAGTTAATAGTTAT+TGG | 0.150386 | 4_3:+45605670 | None:intergenic |
| CACGTTACAATTTAATTATT+TGG | 0.152339 | 4_3:-45601202 | Msa0643120:three_prime_UTR |
| CTTATAGATGATTTGCCTTT+TGG | 0.170375 | 4_3:+45604155 | None:intergenic |
| CTTGCAACATTTGCTGGTTT+TGG | 0.182361 | 4_3:-45602055 | Msa0643120:CDS |
| TGCTGCCAAAATTGAGTTTC+AGG | 0.184858 | 4_3:-45604127 | Msa0643120:CDS |
| ACAAAGAATGTGCTATTAAA+TGG | 0.203935 | 4_3:-45603411 | Msa0643120:CDS |
| GACAATGATCTTGATATTAA+AGG | 0.210057 | 4_3:+45604029 | None:intergenic |
| CTATACCTGAAACTCAATTT+TGG | 0.221918 | 4_3:+45604122 | None:intergenic |
| TCATTGCCATTAGGAGAAAT+TGG | 0.239649 | 4_3:-45603966 | Msa0643120:CDS |
| ATCCTTCTTGCAACATTTGC+TGG | 0.241759 | 4_3:-45602061 | Msa0643120:CDS |
| TTTAAACTTCCAAGTTATTC+TGG | 0.255199 | 4_3:-45605573 | Msa0643120:five_prime_UTR |
| AACTGCAACCACGCCGCGTT+CGG | 0.269889 | 4_3:-45601912 | Msa0643120:CDS |
| TCAATTTGGAGTGCTGCTTA+TGG | 0.286900 | 4_3:-45601246 | Msa0643120:three_prime_UTR |
| GTGTTCTTGATGGTATTTCT+AGG | 0.297442 | 4_3:+45604324 | None:intergenic |
| CACTCTTCTTGTGTTCTTGA+TGG | 0.312086 | 4_3:+45604314 | None:intergenic |
| TATTAAATGGTTTAGTATAA+AGG | 0.322304 | 4_3:-45603398 | Msa0643120:CDS |
| ATTAAATGGTTTAGTATAAA+GGG | 0.326909 | 4_3:-45603397 | Msa0643120:CDS |
| TTTCCACCATGAGTAGATTC+AGG | 0.327029 | 4_3:+45603933 | None:intergenic |
| CAAAATTGAGTTTCAGGTAT+AGG | 0.332561 | 4_3:-45604121 | Msa0643120:CDS |
| AGACCTAATACACATGAAAA+TGG | 0.337456 | 4_3:+45602653 | None:intergenic |
| AATTGAGAAGACAAATAAAA+TGG | 0.362496 | 4_3:+45602937 | None:intergenic |
| TAGGGTTTGGCAAGAAGTTC+CGG | 0.365178 | 4_3:-45602911 | Msa0643120:CDS |
| TGCATAACTTATTGTGTATA+GGG | 0.367788 | 4_3:-45601793 | Msa0643120:intron |
| CATAAGAAAATTCACTCTCT+TGG | 0.376527 | 4_3:+45604229 | None:intergenic |
| CTAAGTGGTATGGCTATCAT+TGG | 0.377267 | 4_3:-45605656 | Msa0643120:five_prime_UTR |
| GATATGTGATGTCTGCAAAA+AGG | 0.378743 | 4_3:-45603368 | Msa0643120:CDS |
| GAATCTACTCATGGTGGAAA+TGG | 0.382585 | 4_3:-45603930 | Msa0643120:CDS |
| GAATGTCCAATTTCTCCTAA+TGG | 0.383436 | 4_3:+45603960 | None:intergenic |
| ACTGCAACCACGCCGCGTTC+GGG | 0.393895 | 4_3:-45601911 | Msa0643120:CDS |
| GGAGTAGGACTTGGTGTCAT+TGG | 0.395438 | 4_3:+45604263 | None:intergenic |
| CTCTAGTCCTAGAAAATAGA+AGG | 0.396581 | 4_3:+45597623 | None:intergenic |
| TTGTCCTTGCTGTTGTTGGC+AGG | 0.397366 | 4_3:+45603760 | None:intergenic |
| AGAACTTCATCATTGCCATT+AGG | 0.398079 | 4_3:-45603975 | Msa0643120:CDS |
| ACAGCTACATTCCAACTTGA+AGG | 0.402108 | 4_3:+45603456 | None:intergenic |
| CTGCATAACTTATTGTGTAT+AGG | 0.405691 | 4_3:-45601794 | Msa0643120:three_prime_UTR |
| TGCTTGTTGAGTTCTTTAGA+TGG | 0.407275 | 4_3:-45602009 | Msa0643120:CDS |
| CTGTAAAGGCGAACTTGCTT+TGG | 0.411554 | 4_3:-45603437 | Msa0643120:CDS |
| CAGTGATGAGCAGGTTCATA+TGG | 0.413395 | 4_3:-45602343 | Msa0643120:CDS |
| CAAAGTACCTTGTGAACAAC+AGG | 0.414633 | 4_3:+45605425 | None:intergenic |
| ATCCTTCCAGTTTGCTCTAG+TGG | 0.416762 | 4_3:-45602312 | Msa0643120:CDS |
| TGCTTCGATTAGGAGCTTCA+TGG | 0.417884 | 4_3:-45602988 | Msa0643120:intron |
| ATAAGAAAATTCACTCTCTT+GGG | 0.420956 | 4_3:+45604230 | None:intergenic |
| TTGGTAAAATATTTACTCCT+AGG | 0.424681 | 4_3:-45604004 | Msa0643120:CDS |
| CACTATAGATTGATTGTGGT+TGG | 0.433741 | 4_3:+45601883 | None:intergenic |
| GGATCCAGAGTGTTCGAAAT+CGG | 0.434250 | 4_3:-45603315 | Msa0643120:CDS |
| ACAGCAAGGACAAAAGTATA+AGG | 0.436445 | 4_3:-45603750 | Msa0643120:CDS |
| ACGTCCTCGCCAAAGGATAC+TGG | 0.437807 | 4_3:-45603658 | Msa0643120:intron |
| ACATGAAAATGGAAGAGATA+TGG | 0.440981 | 4_3:+45602664 | None:intergenic |
| ACCTTCCTGTCACTCTATTA+CGG | 0.442572 | 4_3:-45603336 | Msa0643120:CDS |
| CCTGCTTGTGTCATCGGTAG+AGG | 0.442836 | 4_3:+45601947 | None:intergenic |
| CCTGGATCTGCAACACCAAA+AGG | 0.448813 | 4_3:-45604170 | Msa0643120:CDS |
| TTGACTATACCAGTATCCTT+TGG | 0.457337 | 4_3:+45603649 | None:intergenic |
| ATTTGTGTCCAGTGATGAGC+AGG | 0.460699 | 4_3:-45602352 | Msa0643120:intron |
| TTCCACCATGAGTAGATTCA+GGG | 0.484995 | 4_3:+45603934 | None:intergenic |
| TTCTCTTCCTGTTGTTCACA+AGG | 0.486153 | 4_3:-45605432 | Msa0643120:intron |
| ACTCTCTTGGGAGTAGGAGT+TGG | 0.487747 | 4_3:+45604242 | None:intergenic |
| TTGAGTTCTTTAGATGGAGA+AGG | 0.494098 | 4_3:-45602003 | Msa0643120:CDS |
| TGTTGTCCTGCTTGTGTCAT+CGG | 0.495911 | 4_3:+45601941 | None:intergenic |
| AGAGAACCACTAGAGCAAAC+TGG | 0.496247 | 4_3:+45602306 | None:intergenic |
| GTAGGAGTTGGAGTAGGACT+TGG | 0.496630 | 4_3:+45604254 | None:intergenic |
| GCCAATAACTATTAACTAAG+TGG | 0.499884 | 4_3:-45605671 | Msa0643120:five_prime_UTR |
| TAGATTGATTGTGGTTGGAT+TGG | 0.501651 | 4_3:+45601888 | None:intergenic |
| GCTCCGACAAATAATTCTCC+TGG | 0.502053 | 4_3:-45604188 | Msa0643120:CDS |
| TCTTTAGATGGAGAAGGAGA+TGG | 0.507311 | 4_3:-45601997 | Msa0643120:CDS |
| ATAGGATGATGATGACTCAA+TGG | 0.511888 | 4_3:-45604399 | Msa0643120:intron |
| TGGATCCGTAATAGAGTGAC+AGG | 0.523696 | 4_3:+45603331 | None:intergenic |
| TAGGATGATGATGACTCAAT+GGG | 0.524861 | 4_3:-45604398 | Msa0643120:CDS |
| AGCTGTGTGTAGAATATGTC+TGG | 0.528949 | 4_3:-45603503 | Msa0643120:CDS |
| TCTACTCCTCGAGTAAAAGA+AGG | 0.536933 | 4_3:-45603697 | Msa0643120:CDS |
| AAGTTGGAATGTAGCTGTAA+AGG | 0.537209 | 4_3:-45603451 | Msa0643120:CDS |
| GATCCAGGAGAATTATTTGT+CGG | 0.538191 | 4_3:+45604185 | None:intergenic |
| TAACTATTAACTAAGTGGTA+TGG | 0.544420 | 4_3:-45605666 | Msa0643120:five_prime_UTR |
| ATATCAAGATCATTGTCGCT+TGG | 0.545947 | 4_3:-45604023 | Msa0643120:CDS |
| GGACAAAAGTATAAGGAGGA+TGG | 0.553352 | 4_3:-45603743 | Msa0643120:CDS |
| AAAACAAAACCAGAATAACT+TGG | 0.555882 | 4_3:+45605564 | None:intergenic |
| CTATACACAATAAGTTATGC+AGG | 0.559973 | 4_3:+45601795 | None:intergenic |
| CTGCTTGTGTCATCGGTAGA+GGG | 0.562795 | 4_3:+45601948 | None:intergenic |
| GCTTGTCATTGTTAGCATGT+TGG | 0.565634 | 4_3:-45602887 | Msa0643120:CDS |
| AAATTCACTCTCTTGGGAGT+AGG | 0.568812 | 4_3:+45604236 | None:intergenic |
| CTCCATGACATCATCAACCA+TGG | 0.572094 | 4_3:-45602624 | Msa0643120:CDS |
| GGTGGAAATGGAAGTGTTGG+CGG | 0.573518 | 4_3:-45603918 | Msa0643120:CDS |
| ATGCTAACAATGACAAGCAC+CGG | 0.575004 | 4_3:+45602892 | None:intergenic |
| CATTCCGATTTCGAACACTC+TGG | 0.575417 | 4_3:+45603311 | None:intergenic |
| GACACCGGCAGATATTGAAA+AGG | 0.576803 | 4_3:-45604099 | Msa0643120:CDS |
| ATTTGGAGTGCTGCTTATGG+AGG | 0.579410 | 4_3:-45601243 | Msa0643120:three_prime_UTR |
| TGGTTGGATTGGCCCGAACG+CGG | 0.580262 | 4_3:+45601899 | None:intergenic |
| AAAAGGCGAATACACCTACT+CGG | 0.581781 | 4_3:-45604082 | Msa0643120:CDS |
| GTTGAACACGTCCTCGCCAA+AGG | 0.585680 | 4_3:-45603665 | Msa0643120:CDS |
| TTTGCACTATAGATTGATTG+TGG | 0.589452 | 4_3:+45601879 | None:intergenic |
| AAACATCACATGTTCCTCCC+AGG | 0.591425 | 4_3:-45604364 | Msa0643120:CDS |
| AACCAGCAAATGTTGCAAGA+AGG | 0.594657 | 4_3:+45602059 | None:intergenic |
| AGGAGGTGAGACCTTCAAGT+TGG | 0.596741 | 4_3:-45603467 | Msa0643120:CDS |
| GAGTTTCAGGTATAGGACAC+CGG | 0.599623 | 4_3:-45604114 | Msa0643120:CDS |
| TCAAACCCTGAATCTACTCA+TGG | 0.600239 | 4_3:-45603939 | Msa0643120:CDS |
| GAAGAGGAAACTTCCCGAGT+AGG | 0.600451 | 4_3:+45604068 | None:intergenic |
| AGCACTCCAAATTGAAGATG+TGG | 0.603256 | 4_3:+45601254 | None:intergenic |
| ACCCATGGTTGATGATGTCA+TGG | 0.604370 | 4_3:+45602622 | None:intergenic |
| CATGGTGGAAATGGAAGTGT+TGG | 0.606041 | 4_3:-45603921 | Msa0643120:CDS |
| TAGATGGAGAAGGAGATGGC+AGG | 0.608711 | 4_3:-45601993 | Msa0643120:CDS |
| GAAATTGAAGATGATGATGA+TGG | 0.610860 | 4_3:-45603547 | Msa0643120:CDS |
| AGTGTTCGAAATCGGAATGG+TGG | 0.615884 | 4_3:-45603307 | Msa0643120:CDS |
| CAGAGTGTTCGAAATCGGAA+TGG | 0.618284 | 4_3:-45603310 | Msa0643120:CDS |
| TTGGGAGTAGGAGTTGGAGT+AGG | 0.618886 | 4_3:+45604248 | None:intergenic |
| CCTCTACCGATGACACAAGC+AGG | 0.621790 | 4_3:-45601947 | Msa0643120:CDS |
| AACCCTGAATCTACTCATGG+TGG | 0.624757 | 4_3:-45603936 | Msa0643120:CDS |
| TCCATGACATCATCAACCAT+GGG | 0.625812 | 4_3:-45602623 | Msa0643120:intron |
| AAAGGCGAATACACCTACTC+GGG | 0.630530 | 4_3:-45604081 | Msa0643120:CDS |
| CTGGTTGAATTATGTGAAGG+AGG | 0.630669 | 4_3:-45603484 | Msa0643120:CDS |
| GCTTCATTAGAGCAACAACA+TGG | 0.638560 | 4_3:-45601971 | Msa0643120:CDS |
| GGATTGGCCCGAACGCGGCG+TGG | 0.640920 | 4_3:+45601904 | None:intergenic |
| GCAAGGACAAAAGTATAAGG+AGG | 0.650576 | 4_3:-45603747 | Msa0643120:CDS |
| TCCGTAATAGAGTGACAGGA+AGG | 0.661488 | 4_3:+45603335 | None:intergenic |
| AACCACTAGAGCAAACTGGA+AGG | 0.663973 | 4_3:+45602310 | None:intergenic |
| GCTTAAAATCATACACTGAG+AGG | 0.668806 | 4_3:+45603894 | None:intergenic |
| AATGCCTGCCAACAACAGCA+AGG | 0.677333 | 4_3:-45603764 | Msa0643120:CDS |
| TATACCAGTATCCTTTGGCG+AGG | 0.695835 | 4_3:+45603654 | None:intergenic |
| TGTCTGGTTGAATTATGTGA+AGG | 0.709511 | 4_3:-45603487 | Msa0643120:CDS |
| AGAATATAAACATGTCACTG+AGG | 0.722758 | 4_3:-45605498 | Msa0643120:CDS |
| CATGGTTGATGATGTCATGG+AGG | 0.760797 | 4_3:+45602625 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTATTTTCCAAAAAAAT+TGG | - | chr4_3:45598111-45598130 | Msa0643120:intron | 10.0% |
| !!! | ATTGATAATAAATATGATAA+AGG | - | chr4_3:45602815-45602834 | Msa0643120:intron | 10.0% |
| !!! | AAAAAAAAAAGTTTTGTATT+TGG | + | chr4_3:45602947-45602966 | None:intergenic | 10.0% |
| !!! | ATCTTTCTTTTAATATAATT+AGG | - | chr4_3:45602978-45602997 | Msa0643120:CDS | 10.0% |
| !!! | TCTTTCTTTTAATATAATTA+GGG | - | chr4_3:45602979-45602998 | Msa0643120:CDS | 10.0% |
| !!! | TGTTTTGTATTTATTTTTTT+AGG | + | chr4_3:45603045-45603064 | None:intergenic | 10.0% |
| !!! | TTAAGTTATATATATTTTGT+TGG | - | chr4_3:45603190-45603209 | Msa0643120:intron | 10.0% |
| !!! | TTTTGTAACAAAAAAAAATA+TGG | + | chr4_3:45603593-45603612 | None:intergenic | 10.0% |
| !!! | TTTAACTTTGTAATTTAAAA+AGG | - | chr4_3:45603995-45604014 | Msa0643120:CDS | 10.0% |
| !! | TTAACTTTGTAATTTAAAAA+GGG | - | chr4_3:45603996-45604015 | Msa0643120:CDS | 10.0% |
| !!! | TTTTTTTTTTTAAAGTTGAT+TGG | + | chr4_3:45604620-45604639 | None:intergenic | 10.0% |
| !!! | TTCATTTTAGATTAGTAATT+TGG | + | chr4_3:45598213-45598232 | None:intergenic | 15.0% |
| !!! | TCTTTGATTTTTAATTCATT+TGG | - | chr4_3:45598296-45598315 | Msa0643120:intron | 15.0% |
| !!! | CTATTTCATTTTGTATTTAT+AGG | - | chr4_3:45598863-45598882 | Msa0643120:intron | 15.0% |
| !!! | ATTATTTTCATAAGATAAGT+TGG | + | chr4_3:45599419-45599438 | None:intergenic | 15.0% |
| !! | TATTAAATGGTTTAGTATAA+AGG | - | chr4_3:45599882-45599901 | Msa0643120:intron | 15.0% |
| !! | ATTAAATGGTTTAGTATAAA+GGG | - | chr4_3:45599883-45599902 | Msa0643120:intron | 15.0% |
| !! | TAAATTATTGAATACTAAAG+TGG | - | chr4_3:45600541-45600560 | Msa0643120:intron | 15.0% |
| !! | TTTAAACAAAATAAATGTCA+GGG | + | chr4_3:45600909-45600928 | None:intergenic | 15.0% |
| !! | ATTTAAACAAAATAAATGTC+AGG | + | chr4_3:45600910-45600929 | None:intergenic | 15.0% |
| !!! | TTTTTTAGGCAAAAAATTAT+GGG | + | chr4_3:45603031-45603050 | None:intergenic | 15.0% |
| !!! | TTTTTTTAGGCAAAAAATTA+TGG | + | chr4_3:45603032-45603051 | None:intergenic | 15.0% |
| !! | GTTACAATTAAATAACTTAA+AGG | + | chr4_3:45603294-45603313 | None:intergenic | 15.0% |
| !! | TCTTAAAAATGTAAGTTATT+TGG | + | chr4_3:45603386-45603405 | None:intergenic | 15.0% |
| !!! | AGTTTTTTTTTTTACCAATT+AGG | + | chr4_3:45603445-45603464 | None:intergenic | 15.0% |
| !!! | AAAAATATGGATTAACTTTT+CGG | + | chr4_3:45603580-45603599 | None:intergenic | 15.0% |
| !! | AAAAAATATATTTGTACTCT+AGG | + | chr4_3:45603644-45603663 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTATGAGCAAAT+TGG | - | chr4_3:45603657-45603676 | Msa0643120:intron | 15.0% |
| !! | TTACCTTTATAAAAAAACTT+TGG | - | chr4_3:45603971-45603990 | Msa0643120:CDS | 15.0% |
| !!! | AATCCAAAGTTTTTTTATAA+AGG | + | chr4_3:45603977-45603996 | None:intergenic | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | + | chr4_3:45604039-45604058 | None:intergenic | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | + | chr4_3:45604040-45604059 | None:intergenic | 15.0% |
| !! | TTAATTAACCCATTTAAAAA+TGG | - | chr4_3:45604290-45604309 | Msa0643120:CDS | 15.0% |
| !! | TAATTAACCCATTTAAAAAT+GGG | - | chr4_3:45604291-45604310 | Msa0643120:CDS | 15.0% |
| !!! | GTACTCTTTTTTTTTTTTTT+TGG | + | chr4_3:45604505-45604524 | None:intergenic | 15.0% |
| !! | AAATTTGAAAACCAACAAAA+GGG | + | chr4_3:45598089-45598108 | None:intergenic | 20.0% |
| !! | AAAATTTGAAAACCAACAAA+AGG | + | chr4_3:45598090-45598109 | None:intergenic | 20.0% |
| !! | AGAAAACAGATAAAATTAGT+TGG | - | chr4_3:45598456-45598475 | Msa0643120:intron | 20.0% |
| !!! | GTATCTTTTAATAGTCAATT+TGG | - | chr4_3:45598590-45598609 | Msa0643120:intron | 20.0% |
| !! | AAATTTAGTGATCAAAATGA+CGG | - | chr4_3:45598760-45598779 | Msa0643120:intron | 20.0% |
| !! | AAATTGACAAGTTAAAATGA+TGG | + | chr4_3:45599449-45599468 | None:intergenic | 20.0% |
| !! | AAATCAGAAAAGATCTTTAT+TGG | + | chr4_3:45600245-45600264 | None:intergenic | 20.0% |
| !! | AATTGAGAAGACAAATAAAA+TGG | + | chr4_3:45600346-45600365 | None:intergenic | 20.0% |
| !!! | ATTTGTCTTCTCAATTTTAT+AGG | - | chr4_3:45600350-45600369 | Msa0643120:intron | 20.0% |
| !!! | TTTGTCTTCTCAATTTTATA+GGG | - | chr4_3:45600351-45600370 | Msa0643120:intron | 20.0% |
| !!! | TTTTCTCAAATGAAAAGTAT+AGG | + | chr4_3:45601057-45601076 | None:intergenic | 20.0% |
| !!! | ATACTTTTCATTTGAGAAAA+AGG | - | chr4_3:45601057-45601076 | Msa0643120:intron | 20.0% |
| !! | CACGTTACAATTTAATTATT+TGG | - | chr4_3:45602078-45602097 | Msa0643120:CDS | 20.0% |
| !! | TTGAATGTAATTACATTTGT+TGG | + | chr4_3:45602165-45602184 | None:intergenic | 20.0% |
| !! | TAATAATATTATAGCGTGTT+TGG | + | chr4_3:45602298-45602317 | None:intergenic | 20.0% |
| !!! | TTTATCTTGGTGATAAAATA+TGG | + | chr4_3:45602418-45602437 | None:intergenic | 20.0% |
| !!! | TTCTTTTAATATAATTAGGG+TGG | - | chr4_3:45602982-45603001 | Msa0643120:intron | 20.0% |
| !!! | TTTTTAGGCAAAAAATTATG+GGG | + | chr4_3:45603030-45603049 | None:intergenic | 20.0% |
| !! | TAAATAACTTAAAGGATGTA+AGG | + | chr4_3:45603286-45603305 | None:intergenic | 20.0% |
| !!! | AAGTATTTTTCGTAATGTAT+AGG | - | chr4_3:45603327-45603346 | Msa0643120:CDS | 20.0% |
| !! | TAAAATACCTCAAATTGTTA+CGG | - | chr4_3:45603408-45603427 | Msa0643120:CDS | 20.0% |
| !!! | AGTGCTATTTAGTTTTTTTT+AGG | - | chr4_3:45603530-45603549 | Msa0643120:CDS | 20.0% |
| !!! | GTGCTATTTAGTTTTTTTTA+GGG | - | chr4_3:45603531-45603550 | Msa0643120:CDS | 20.0% |
| !!! | TGCTATTTAGTTTTTTTTAG+GGG | - | chr4_3:45603532-45603551 | Msa0643120:CDS | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | + | chr4_3:45604227-45604246 | None:intergenic | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr4_3:45604226-45604245 | None:intergenic | 20.0% |
| !!! | TGTTGATGGAAAATTTTATA+GGG | + | chr4_3:45604099-45604118 | None:intergenic | 20.0% |
| !!! | ATGTTGATGGAAAATTTTAT+AGG | + | chr4_3:45604100-45604119 | None:intergenic | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | - | chr4_3:45604226-45604245 | Msa0643120:CDS | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | - | chr4_3:45604227-45604246 | Msa0643120:CDS | 20.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | - | chr4_3:45604257-45604276 | Msa0643120:CDS | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | - | chr4_3:45604258-45604277 | Msa0643120:CDS | 20.0% |
| !!! | TCTTTTTTTTTTTTTTTGGC+CGG | + | chr4_3:45604501-45604520 | None:intergenic | 20.0% |
| !! | AAGTTAGAATATGAGAAATT+TGG | + | chr4_3:45604981-45605000 | None:intergenic | 20.0% |
| !! | ATCAAAATCAAAGAATTAGA+AGG | - | chr4_3:45605188-45605207 | Msa0643120:intron | 20.0% |
| !! | TCAAAATCAAAGAATTAGAA+GGG | - | chr4_3:45605189-45605208 | Msa0643120:intron | 20.0% |
| ! | ACCACTTAGTTAATAGTTAT+TGG | + | chr4_3:45597613-45597632 | None:intergenic | 25.0% |
| ! | TAACTATTAACTAAGTGGTA+TGG | - | chr4_3:45597614-45597633 | Msa0643120:three_prime_UTR | 25.0% |
| ! | TTTAAACTTCCAAGTTATTC+TGG | - | chr4_3:45597707-45597726 | Msa0643120:intron | 25.0% |
| ! | AAAACAAAACCAGAATAACT+TGG | + | chr4_3:45597719-45597738 | None:intergenic | 25.0% |
| !!! | CTTTTATCTTCTCTTTGTTT+TGG | - | chr4_3:45597907-45597926 | Msa0643120:intron | 25.0% |
| !! | AATAAATAGTACCCTTTTGT+TGG | - | chr4_3:45598075-45598094 | Msa0643120:intron | 25.0% |
| ! | AACTGCATAATTCAAATTAG+AGG | + | chr4_3:45598157-45598176 | None:intergenic | 25.0% |
| !! | TACTATAGTTTTTGACATAC+TGG | + | chr4_3:45598398-45598417 | None:intergenic | 25.0% |
| ! | ACAATTGAACTGATTAATAG+TGG | + | chr4_3:45598482-45598501 | None:intergenic | 25.0% |
| ! | AGTTCAATTGTATTGTAGTT+TGG | - | chr4_3:45598491-45598510 | Msa0643120:intron | 25.0% |
| !! | TTTTGATCACTAAATTTGTG+AGG | + | chr4_3:45598757-45598776 | None:intergenic | 25.0% |
| ! | ATAAGAAAATTCACTCTCTT+GGG | + | chr4_3:45599053-45599072 | None:intergenic | 25.0% |
| ! | GACAATGATCTTGATATTAA+AGG | + | chr4_3:45599254-45599273 | None:intergenic | 25.0% |
| ! | TTGGTAAAATATTTACTCCT+AGG | - | chr4_3:45599276-45599295 | Msa0643120:intron | 25.0% |
| !! | ACAAAGAATGTGCTATTAAA+TGG | - | chr4_3:45599869-45599888 | Msa0643120:intron | 25.0% |
| !!! | CTAGTTTTGTATGATAAAGA+TGG | - | chr4_3:45600067-45600086 | Msa0643120:intron | 25.0% |
| !! | TTGTATGATAAAGATGGATT+TGG | - | chr4_3:45600073-45600092 | Msa0643120:intron | 25.0% |
| ! | TTGCTCAAGAAAACAAAAAT+AGG | + | chr4_3:45600419-45600438 | None:intergenic | 25.0% |
| !!! | TCTGATTTTCTCTTTTTTGT+AGG | - | chr4_3:45600566-45600585 | Msa0643120:intron | 25.0% |
| !!! | TTTTTTGTAGGTGACAAAAA+TGG | - | chr4_3:45600578-45600597 | Msa0643120:intron | 25.0% |
| !! | TTTTTGTAGGTGACAAAAAT+GGG | - | chr4_3:45600579-45600598 | Msa0643120:intron | 25.0% |
| ! | AATATAGTTCTCATAGAAAG+CGG | + | chr4_3:45601027-45601046 | None:intergenic | 25.0% |
| ! | TGCATAACTTATTGTGTATA+GGG | - | chr4_3:45601487-45601506 | Msa0643120:intron | 25.0% |
| ! | ACTTTAATCACACATCTATA+TGG | - | chr4_3:45601521-45601540 | Msa0643120:intron | 25.0% |
| ! | CTTTAATCACACATCTATAT+GGG | - | chr4_3:45601522-45601541 | Msa0643120:intron | 25.0% |
| ! | AATTCAGTGAAATTATGTGT+CGG | - | chr4_3:45601688-45601707 | Msa0643120:intron | 25.0% |
| !!! | TTTTTGGCTTTCTTTTTTGT+AGG | - | chr4_3:45601825-45601844 | Msa0643120:three_prime_UTR | 25.0% |
| ! | AAGTAACTACATATTGCATT+TGG | + | chr4_3:45601954-45601973 | None:intergenic | 25.0% |
| !! | ATGTAGTTACTTTACTTACA+TGG | - | chr4_3:45601962-45601981 | Msa0643120:CDS | 25.0% |
| !! | TGTATTTCCTTCTATTTTCT+AGG | - | chr4_3:45601988-45602007 | Msa0643120:CDS | 25.0% |
| !! | TAGTTACTTTACTTACATGA+AGG | - | chr4_3:45602111-45602130 | Msa0643120:intron | 25.0% |
| ! | AAAAGCAATCTTCTTTATCT+TGG | + | chr4_3:45602431-45602450 | None:intergenic | 25.0% |
| ! | GTACTAGTGTATACTATATT+TGG | - | chr4_3:45602685-45602704 | Msa0643120:CDS | 25.0% |
| ! | GTATACTATATTTGGAAGAT+AGG | - | chr4_3:45602693-45602712 | Msa0643120:CDS | 25.0% |
| ! | ACAATATCGAAATAGATCTT+TGG | + | chr4_3:45603099-45603118 | None:intergenic | 25.0% |
| ! | ACATTACGAAAAATACTTGA+AGG | + | chr4_3:45603325-45603344 | None:intergenic | 25.0% |
| ! | TATTTAACCGTAACAATTTG+AGG | + | chr4_3:45603418-45603437 | None:intergenic | 25.0% |
| !!! | CCTTTAAGTTTTTATGACTT+AGG | + | chr4_3:45603505-45603524 | None:intergenic | 25.0% |
| ! | CCTAAGTCATAAAAACTTAA+AGG | - | chr4_3:45603502-45603521 | Msa0643120:CDS | 25.0% |
| !!! | TATTTAGTTTTTTTTAGGGG+AGG | - | chr4_3:45603535-45603554 | Msa0643120:CDS | 25.0% |
| ! | AGGTTTGACTACTAATAATA+TGG | + | chr4_3:45603624-45603643 | None:intergenic | 25.0% |
| !!! | TTTTTTTATGAGCAAATTGG+TGG | - | chr4_3:45603660-45603679 | Msa0643120:CDS | 25.0% |
| !! | CTTCTAAAAAAAACCATTCA+AGG | + | chr4_3:45603722-45603741 | None:intergenic | 25.0% |
| ! | AAATGCTAACATATGCAATA+AGG | + | chr4_3:45603833-45603852 | None:intergenic | 25.0% |
| ! | AAAAGGGTTAATGAAGTAAA+TGG | - | chr4_3:45604012-45604031 | Msa0643120:CDS | 25.0% |
| !! | TGCTGATGGAAAATTTTATA+GGG | + | chr4_3:45604130-45604149 | None:intergenic | 25.0% |
| !! | ATGCTGATGGAAAATTTTAT+AGG | + | chr4_3:45604131-45604150 | None:intergenic | 25.0% |
| !! | GCTGATCGAAAAATTTTATA+GGG | + | chr4_3:45604161-45604180 | None:intergenic | 25.0% |
| !! | TGCTGATCGAAAAATTTTAT+AGG | + | chr4_3:45604162-45604181 | None:intergenic | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+GGG | + | chr4_3:45604193-45604212 | None:intergenic | 25.0% |
| !! | ACATTTTCCTTAAGCATTTT+AGG | + | chr4_3:45604194-45604213 | None:intergenic | 25.0% |
| !!! | CTTTTTTTTTTTTTTTGGCC+GGG | + | chr4_3:45604500-45604519 | None:intergenic | 25.0% |
| ! | TTACTATCAGAGGAAAAATT+CGG | - | chr4_3:45604702-45604721 | Msa0643120:intron | 25.0% |
| ! | ACAACAACAATAACAATAAC+AGG | - | chr4_3:45604730-45604749 | Msa0643120:intron | 25.0% |
| !! | TAATGTTTAGTAAAAGCACA+AGG | - | chr4_3:45604779-45604798 | Msa0643120:intron | 25.0% |
| ! | AAATGTTGAAAAGAAAGAGA+AGG | + | chr4_3:45604926-45604945 | None:intergenic | 25.0% |
| !! | TCAACATTTTATCAAACACT+TGG | - | chr4_3:45604937-45604956 | Msa0643120:intron | 25.0% |
| !! | TATGAGAAATTTGGTGAATT+TGG | + | chr4_3:45604972-45604991 | None:intergenic | 25.0% |
| ! | TTGAAGCATGAAATTAAAGT+GGG | + | chr4_3:45605016-45605035 | None:intergenic | 25.0% |
| !! | TTTGAAGCATGAAATTAAAG+TGG | + | chr4_3:45605017-45605036 | None:intergenic | 25.0% |
| ! | CAAAATCAAAGAATTAGAAG+GGG | - | chr4_3:45605190-45605209 | Msa0643120:intron | 25.0% |
| ! | AATTCAGTGAAATTATGTGT+CGG | - | chr4_3:45601688-45601707 | Msa0643120:intron | 25.0% |
| !!! | TTTTTGGCTTTCTTTTTTGT+AGG | - | chr4_3:45601825-45601844 | Msa0643120:three_prime_UTR | 25.0% |
| ! | AAGTAACTACATATTGCATT+TGG | + | chr4_3:45601954-45601973 | None:intergenic | 25.0% |
| !! | ATGTAGTTACTTTACTTACA+TGG | - | chr4_3:45601962-45601981 | Msa0643120:CDS | 25.0% |
| !! | TGTATTTCCTTCTATTTTCT+AGG | - | chr4_3:45601988-45602007 | Msa0643120:CDS | 25.0% |
| GCCAATAACTATTAACTAAG+TGG | - | chr4_3:45597609-45597628 | Msa0643120:three_prime_UTR | 30.0% | |
| AGAATATAAACATGTCACTG+AGG | - | chr4_3:45597782-45597801 | Msa0643120:intron | 30.0% | |
| AGTGATGTTTCTTCATACTA+AGG | - | chr4_3:45597941-45597960 | Msa0643120:intron | 30.0% | |
| CTTCATACTAAGGTTCTTTA+AGG | - | chr4_3:45597951-45597970 | Msa0643120:intron | 30.0% | |
| !!! | AGATCAAGCTCCAATTTTTT+TGG | + | chr4_3:45598124-45598143 | None:intergenic | 30.0% |
| !! | CTAGCTGATATTTGTTATCA+AGG | - | chr4_3:45598239-45598258 | Msa0643120:intron | 30.0% |
| !! | TATTTGTTATCAAGGATCAG+TGG | - | chr4_3:45598247-45598266 | Msa0643120:intron | 30.0% |
| CAAAAACTATAGTACTTTGC+CGG | - | chr4_3:45598404-45598423 | Msa0643120:intron | 30.0% | |
| !! | AGAAGATTTTGTTTCTTCCT+GGG | + | chr4_3:45598936-45598955 | None:intergenic | 30.0% |
| CATAAGAAAATTCACTCTCT+TGG | + | chr4_3:45599054-45599073 | None:intergenic | 30.0% | |
| ! | TTTTCTTATGACTTCTCGTT+CGG | - | chr4_3:45599064-45599083 | Msa0643120:intron | 30.0% |
| !! | CTTATAGATGATTTGCCTTT+TGG | + | chr4_3:45599128-45599147 | None:intergenic | 30.0% |
| ! | CTATACCTGAAACTCAATTT+TGG | + | chr4_3:45599161-45599180 | None:intergenic | 30.0% |
| ! | CAAAATTGAGTTTCAGGTAT+AGG | - | chr4_3:45599159-45599178 | Msa0643120:intron | 30.0% |
| ! | TTTTGCAGAAAAAAGAGACT+CGG | - | chr4_3:45599470-45599489 | Msa0643120:intron | 30.0% |
| !! | TCCATTTTTCATGAATGCAT+AGG | + | chr4_3:45599681-45599700 | None:intergenic | 30.0% |
| TCATCATCATCTTCAATTTC+TGG | + | chr4_3:45599733-45599752 | None:intergenic | 30.0% | |
| ! | GAAATTGAAGATGATGATGA+TGG | - | chr4_3:45599733-45599752 | Msa0643120:intron | 30.0% |
| TATGCATATATGCTTCGATT+AGG | - | chr4_3:45600282-45600301 | Msa0643120:intron | 30.0% | |
| ! | CTTCTCAATTTTATAGGGTT+TGG | - | chr4_3:45600356-45600375 | Msa0643120:intron | 30.0% |
| ! | TTGTTTTCTTGAGCAACTTT+TGG | - | chr4_3:45600423-45600442 | Msa0643120:intron | 30.0% |
| ACATGAAAATGGAAGAGATA+TGG | + | chr4_3:45600619-45600638 | None:intergenic | 30.0% | |
| ! | CTTCCATTTTCATGTGTATT+AGG | - | chr4_3:45600624-45600643 | Msa0643120:intron | 30.0% |
| AGACCTAATACACATGAAAA+TGG | + | chr4_3:45600630-45600649 | None:intergenic | 30.0% | |
| TTAGATCAGTCAAAATCAGT+TGG | - | chr4_3:45600704-45600723 | Msa0643120:intron | 30.0% | |
| CATGATGTACAAAATTGCAA+TGG | + | chr4_3:45600752-45600771 | None:intergenic | 30.0% | |
| ! | CATTGCAATTTTGTACATCA+TGG | - | chr4_3:45600750-45600769 | Msa0643120:intron | 30.0% |
| ! | GTATAATCACATGTATCGAT+CGG | + | chr4_3:45600817-45600836 | None:intergenic | 30.0% |
| TTCTAATGCTTCTCTATGTA+GGG | + | chr4_3:45601136-45601155 | None:intergenic | 30.0% | |
| ATTCTAATGCTTCTCTATGT+AGG | + | chr4_3:45601137-45601156 | None:intergenic | 30.0% | |
| TTTGCACTATAGATTGATTG+TGG | + | chr4_3:45601404-45601423 | None:intergenic | 30.0% | |
| CTATACACAATAAGTTATGC+AGG | + | chr4_3:45601488-45601507 | None:intergenic | 30.0% | |
| CTGCATAACTTATTGTGTAT+AGG | - | chr4_3:45601486-45601505 | Msa0643120:intron | 30.0% | |
| TAACTTATTGTGTATAGGGT+AGG | - | chr4_3:45601491-45601510 | Msa0643120:intron | 30.0% | |
| AACTTATTGTGTATAGGGTA+GGG | - | chr4_3:45601492-45601511 | Msa0643120:intron | 30.0% | |
| ! | TGACACAATGATTTTGCTTT+AGG | - | chr4_3:45601856-45601875 | Msa0643120:CDS | 30.0% |
| GTTGAGGAAATGTGTTTATT+AGG | - | chr4_3:45601897-45601916 | Msa0643120:CDS | 30.0% | |
| ! | GATTTTCCACATCTTCAATT+TGG | - | chr4_3:45602020-45602039 | Msa0643120:CDS | 30.0% |
| CTAGTATTTGTAGCTTCAAA+TGG | + | chr4_3:45602232-45602251 | None:intergenic | 30.0% | |
| ! | ATACTAGCTTCTCAAAATCA+CGG | - | chr4_3:45602245-45602264 | Msa0643120:intron | 30.0% |
| !! | TATTATAGCGTGTTTGGTTT+TGG | + | chr4_3:45602292-45602311 | None:intergenic | 30.0% |
| TTGCTTGTCAGTATCATATT+TGG | - | chr4_3:45602325-45602344 | Msa0643120:CDS | 30.0% | |
| ! | ATATGCTTTTCCCTTTATGT+TGG | - | chr4_3:45602491-45602510 | Msa0643120:intron | 30.0% |
| ! | TATGCTTTTCCCTTTATGTT+GGG | - | chr4_3:45602492-45602511 | Msa0643120:intron | 30.0% |
| TTTATTCTCCCCAACATAAA+GGG | + | chr4_3:45602504-45602523 | None:intergenic | 30.0% | |
| ! | TTTTATTCTCCCCAACATAA+AGG | + | chr4_3:45602505-45602524 | None:intergenic | 30.0% |
| AACAAACCAATTTGTCACTA+TGG | + | chr4_3:45602544-45602563 | None:intergenic | 30.0% | |
| ! | TTTTGTTACACGAATGAATG+TGG | - | chr4_3:45602564-45602583 | Msa0643120:intron | 30.0% |
| TACTATATTTGGAAGATAGG+AGG | - | chr4_3:45602696-45602715 | Msa0643120:intron | 30.0% | |
| ACTATATTTGGAAGATAGGA+GGG | - | chr4_3:45602697-45602716 | Msa0643120:intron | 30.0% | |
| ACTTAAAGGATGTAAGGATA+CGG | + | chr4_3:45603280-45603299 | None:intergenic | 30.0% | |
| CGGTTAAATAACTTCCTAAT+TGG | - | chr4_3:45603428-45603447 | Msa0643120:CDS | 30.0% | |
| ! | AAACCATTCAAGGAGTTTTA+AGG | + | chr4_3:45603712-45603731 | None:intergenic | 30.0% |
| ! | AAAACTTGTTCAATTGACAG+TGG | + | chr4_3:45603948-45603967 | None:intergenic | 30.0% |
| ! | ACTGTCAATTGAACAAGTTT+TGG | - | chr4_3:45603947-45603966 | Msa0643120:CDS | 30.0% |
| ATAGGGACTAAAAATGTTGA+TGG | + | chr4_3:45604113-45604132 | None:intergenic | 30.0% | |
| TTTAGTCCCTAAAATGCTTA+AGG | - | chr4_3:45604184-45604203 | Msa0643120:CDS | 30.0% | |
| ! | AACCCATTTAAAAATGGGTT+TGG | - | chr4_3:45604296-45604315 | Msa0643120:CDS | 30.0% |
| !! | GTCCAAACCCATTTTTAAAT+GGG | + | chr4_3:45604301-45604320 | None:intergenic | 30.0% |
| !! | TGTCCAAACCCATTTTTAAA+TGG | + | chr4_3:45604302-45604321 | None:intergenic | 30.0% |
| AACAATGCATGAAATATGCA+AGG | - | chr4_3:45604460-45604479 | Msa0643120:intron | 30.0% | |
| TACTATCAGAGGAAAAATTC+GGG | - | chr4_3:45604703-45604722 | Msa0643120:intron | 30.0% | |
| !!! | AGGTTTTTTTTTTCCTGACT+TGG | - | chr4_3:45604750-45604769 | Msa0643120:intron | 30.0% |
| !!! | GGTTTTTTTTTTCCTGACTT+GGG | - | chr4_3:45604751-45604770 | Msa0643120:intron | 30.0% |
| ! | ACATTTTATCAAACACTTGG+TGG | - | chr4_3:45604940-45604959 | Msa0643120:intron | 30.0% |
| ! | CATTTTATCAAACACTTGGT+GGG | - | chr4_3:45604941-45604960 | Msa0643120:intron | 30.0% |
| CTTCAAAATCATTCCTTTCA+TGG | - | chr4_3:45605030-45605049 | Msa0643120:intron | 30.0% | |
| !!! | CTTTCATGGAATTTTGAGAT+GGG | - | chr4_3:45605044-45605063 | Msa0643120:intron | 30.0% |
| !!! | TTGTTGTCTTTTGTTGTTGA+TGG | - | chr4_3:45605095-45605114 | Msa0643120:intron | 30.0% |
| ! | TGACACAATGATTTTGCTTT+AGG | - | chr4_3:45601856-45601875 | Msa0643120:CDS | 30.0% |
| GTTGAGGAAATGTGTTTATT+AGG | - | chr4_3:45601897-45601916 | Msa0643120:CDS | 30.0% | |
| !! | ATAAGGATTGGTTTGAGTGT+TGG | + | chr4_3:45598019-45598038 | None:intergenic | 35.0% |
| AACACTCAAACCAATCCTTA+TGG | - | chr4_3:45598018-45598037 | Msa0643120:intron | 35.0% | |
| !!! | GTGGTGTAGTTTGCTTTTTT+GGG | - | chr4_3:45598040-45598059 | Msa0643120:intron | 35.0% |
| TAGTCCTTGAATGTATGAGA+CGG | - | chr4_3:45598538-45598557 | Msa0643120:intron | 35.0% | |
| ATAACCGTCTCATACATTCA+AGG | + | chr4_3:45598545-45598564 | None:intergenic | 35.0% | |
| GTGTCTTTCATCAGTTAGTT+TGG | - | chr4_3:45598622-45598641 | Msa0643120:intron | 35.0% | |
| TGATCACTAAATTTGTGAGG+TGG | + | chr4_3:45598754-45598773 | None:intergenic | 35.0% | |
| GATCAAAATGACGGTTTACT+TGG | - | chr4_3:45598769-45598788 | Msa0643120:intron | 35.0% | |
| ! | ATAGGATGATGATGACTCAA+TGG | - | chr4_3:45598881-45598900 | Msa0643120:intron | 35.0% |
| ! | TAGGATGATGATGACTCAAT+GGG | - | chr4_3:45598882-45598901 | Msa0643120:intron | 35.0% |
| !! | GAGAAGATTTTGTTTCTTCC+TGG | + | chr4_3:45598937-45598956 | None:intergenic | 35.0% |
| ! | GTGTTCTTGATGGTATTTCT+AGG | + | chr4_3:45598959-45598978 | None:intergenic | 35.0% |
| GATCCAGGAGAATTATTTGT+CGG | + | chr4_3:45599098-45599117 | None:intergenic | 35.0% | |
| ATATCAAGATCATTGTCGCT+TGG | - | chr4_3:45599257-45599276 | Msa0643120:intron | 35.0% | |
| ! | GATGAAGTTCTTTTCATCCT+AGG | + | chr4_3:45599296-45599315 | None:intergenic | 35.0% |
| AGAACTTCATCATTGCCATT+AGG | - | chr4_3:45599305-45599324 | Msa0643120:intron | 35.0% | |
| TCATTGCCATTAGGAGAAAT+TGG | - | chr4_3:45599314-45599333 | Msa0643120:intron | 35.0% | |
| GAATGTCCAATTTCTCCTAA+TGG | + | chr4_3:45599323-45599342 | None:intergenic | 35.0% | |
| GCTTAAAATCATACACTGAG+AGG | + | chr4_3:45599389-45599408 | None:intergenic | 35.0% | |
| ! | ACAGCAAGGACAAAAGTATA+AGG | - | chr4_3:45599530-45599549 | Msa0643120:intron | 35.0% |
| ! | TCATTTCCTTCTTTTACTCG+AGG | + | chr4_3:45599592-45599611 | None:intergenic | 35.0% |
| TTGACTATACCAGTATCCTT+TGG | + | chr4_3:45599634-45599653 | None:intergenic | 35.0% | |
| GCCTATGCATTCATGAAAAA+TGG | - | chr4_3:45599677-45599696 | Msa0643120:intron | 35.0% | |
| TGTCTGGTTGAATTATGTGA+AGG | - | chr4_3:45599793-45599812 | Msa0643120:intron | 35.0% | |
| AAGTTGGAATGTAGCTGTAA+AGG | - | chr4_3:45599829-45599848 | Msa0643120:intron | 35.0% | |
| GATATGTGATGTCTGCAAAA+AGG | - | chr4_3:45599912-45599931 | Msa0643120:intron | 35.0% | |
| CAAAATAAATGTCAGGGTTG+TGG | + | chr4_3:45600903-45600922 | None:intergenic | 35.0% | |
| ! | CTCTAGTGAAAAGTACATGT+AGG | + | chr4_3:45601107-45601126 | None:intergenic | 35.0% |
| ! | TTATGATATCTGTCACTTGC+AGG | - | chr4_3:45601173-45601192 | Msa0643120:intron | 35.0% |
| ! | TGCTTGTTGAGTTCTTTAGA+TGG | - | chr4_3:45601271-45601290 | Msa0643120:three_prime_UTR | 35.0% |
| TTGAGTTCTTTAGATGGAGA+AGG | - | chr4_3:45601277-45601296 | Msa0643120:intron | 35.0% | |
| TAGATTGATTGTGGTTGGAT+TGG | + | chr4_3:45601395-45601414 | None:intergenic | 35.0% | |
| CACTATAGATTGATTGTGGT+TGG | + | chr4_3:45601400-45601419 | None:intergenic | 35.0% | |
| GAATATAGCTTCTCTTGCTA+TGG | - | chr4_3:45601564-45601583 | Msa0643120:intron | 35.0% | |
| ! | TTGTACTGATCTATGAAGCA+CGG | - | chr4_3:45601604-45601623 | Msa0643120:intron | 35.0% |
| TATGAAGCACAAACACTCAT+CGG | + | chr4_3:45601766-45601785 | None:intergenic | 35.0% | |
| ! | ATGAAAACCAGAAGGGTTTT+TGG | - | chr4_3:45601809-45601828 | Msa0643120:three_prime_UTR | 35.0% |
| !!! | GCTTTCTTTTTTGTAGGCTT+GGG | - | chr4_3:45601831-45601850 | Msa0643120:three_prime_UTR | 35.0% |
| CTCTAGTCCTAGAAAATAGA+AGG | + | chr4_3:45601998-45602017 | None:intergenic | 35.0% | |
| CGTGTAACTAAACAAGGTTA+AGG | + | chr4_3:45602200-45602219 | None:intergenic | 35.0% | |
| ! | AACCTTGTTTAGTTACACGA+TGG | - | chr4_3:45602201-45602220 | Msa0643120:intron | 35.0% |
| ! | ACCTTGTTTAGTTACACGAT+GGG | - | chr4_3:45602202-45602221 | Msa0643120:intron | 35.0% |
| TCAAAATCACGGCAAAAATG+TGG | - | chr4_3:45602256-45602275 | Msa0643120:intron | 35.0% | |
| CTCTATGTGTCACATAAGTT+AGG | + | chr4_3:45602391-45602410 | None:intergenic | 35.0% | |
| ! | ATGCTTTTCCCTTTATGTTG+GGG | - | chr4_3:45602493-45602512 | Msa0643120:intron | 35.0% |
| TGCAATCCATAGTGACAAAT+TGG | - | chr4_3:45602535-45602554 | Msa0643120:intron | 35.0% | |
| CTATATTTGGAAGATAGGAG+GGG | - | chr4_3:45602698-45602717 | Msa0643120:intron | 35.0% | |
| TATATTTGGAAGATAGGAGG+GGG | - | chr4_3:45602699-45602718 | Msa0643120:intron | 35.0% | |
| ! | ACCAATCCTTCCATTTTGAA+GGG | + | chr4_3:45602759-45602778 | None:intergenic | 35.0% |
| ! | AACCAATCCTTCCATTTTGA+AGG | + | chr4_3:45602760-45602779 | None:intergenic | 35.0% |
| AAAAAATTATGGGGAGCAGA+GGG | + | chr4_3:45603021-45603040 | None:intergenic | 35.0% | |
| ! | TAGATCTTTGGTTCAACAGT+GGG | + | chr4_3:45603087-45603106 | None:intergenic | 35.0% |
| ! | ATAGATCTTTGGTTCAACAG+TGG | + | chr4_3:45603088-45603107 | None:intergenic | 35.0% |
| ! | GGTGGCTAAGTTAATTTTTC+AGG | - | chr4_3:45603678-45603697 | Msa0643120:CDS | 35.0% |
| TCTCCTTAAAACTCCTTGAA+TGG | - | chr4_3:45603706-45603725 | Msa0643120:CDS | 35.0% | |
| ATAGGGACTAAAAATGCTGA+TGG | + | chr4_3:45604144-45604163 | None:intergenic | 35.0% | |
| ATGCTTAAGGAAAATGTCAC+AGG | - | chr4_3:45604197-45604216 | Msa0643120:CDS | 35.0% | |
| TGCTTAAGGAAAATGTCACA+GGG | - | chr4_3:45604198-45604217 | Msa0643120:CDS | 35.0% | |
| TGCATGAAATATGCAAGGTT+TGG | - | chr4_3:45604465-45604484 | Msa0643120:intron | 35.0% | |
| !!! | TTTTTTATCCGAAACGTGCT+TGG | - | chr4_3:45604676-45604695 | Msa0643120:intron | 35.0% |
| AACATTAAACAACCCAAGTC+AGG | + | chr4_3:45604766-45604785 | None:intergenic | 35.0% | |
| CCATCTCAAAATTCCATGAA+AGG | + | chr4_3:45605046-45605065 | None:intergenic | 35.0% | |
| !! | CCTTTCATGGAATTTTGAGA+TGG | - | chr4_3:45605043-45605062 | Msa0643120:intron | 35.0% |
| GATGGAATTTACTGAACCAA+TGG | - | chr4_3:45605113-45605132 | Msa0643120:intron | 35.0% | |
| AACCAATGGCATAGTATTTC+AGG | - | chr4_3:45605127-45605146 | Msa0643120:intron | 35.0% | |
| ! | TATTTCAGGTGTGTGTAGAT+TGG | - | chr4_3:45605141-45605160 | Msa0643120:intron | 35.0% |
| ! | ATGAAAACCAGAAGGGTTTT+TGG | - | chr4_3:45601809-45601828 | Msa0643120:three_prime_UTR | 35.0% |
| !!! | GCTTTCTTTTTTGTAGGCTT+GGG | - | chr4_3:45601831-45601850 | Msa0643120:three_prime_UTR | 35.0% |
| CTCTAGTCCTAGAAAATAGA+AGG | + | chr4_3:45601998-45602017 | None:intergenic | 35.0% | |
| CTAAGTGGTATGGCTATCAT+TGG | - | chr4_3:45597624-45597643 | Msa0643120:three_prime_UTR | 40.0% | |
| TTCTCTTCCTGTTGTTCACA+AGG | - | chr4_3:45597848-45597867 | Msa0643120:intron | 40.0% | |
| ! | CAAAGTACCTTGTGAACAAC+AGG | + | chr4_3:45597858-45597877 | None:intergenic | 40.0% |
| ACTCAAACCAATCCTTATGG+TGG | - | chr4_3:45598021-45598040 | Msa0643120:intron | 40.0% | |
| AACTACACCACCATAAGGAT+TGG | + | chr4_3:45598031-45598050 | None:intergenic | 40.0% | |
| AAGCAAACTACACCACCATA+AGG | + | chr4_3:45598036-45598055 | None:intergenic | 40.0% | |
| !!! | GGTGGTGTAGTTTGCTTTTT+TGG | - | chr4_3:45598039-45598058 | Msa0643120:intron | 40.0% |
| ATTCTCCCATTCATCGATAC+CGG | + | chr4_3:45598426-45598445 | None:intergenic | 40.0% | |
| CGTGTCTTCTGTTAGTTACA+TGG | - | chr4_3:45598653-45598672 | Msa0643120:intron | 40.0% | |
| CAAGTGAAGTTACGAACAGA+AGG | - | chr4_3:45598676-45598695 | Msa0643120:intron | 40.0% | |
| !! | AGATTTTGTTTCTTCCTGGG+AGG | + | chr4_3:45598933-45598952 | None:intergenic | 40.0% |
| CACTCTTCTTGTGTTCTTGA+TGG | + | chr4_3:45598969-45598988 | None:intergenic | 40.0% | |
| AAATTCACTCTCTTGGGAGT+AGG | + | chr4_3:45599047-45599066 | None:intergenic | 40.0% | |
| TGCTGCCAAAATTGAGTTTC+AGG | - | chr4_3:45599153-45599172 | Msa0643120:intron | 40.0% | |
| ! | TTCGCCTTTTCAATATCTGC+CGG | + | chr4_3:45599188-45599207 | None:intergenic | 40.0% |
| AAAAGGCGAATACACCTACT+CGG | - | chr4_3:45599198-45599217 | Msa0643120:intron | 40.0% | |
| TCAAACCCTGAATCTACTCA+TGG | - | chr4_3:45599341-45599360 | Msa0643120:intron | 40.0% | |
| TTCCACCATGAGTAGATTCA+GGG | + | chr4_3:45599349-45599368 | None:intergenic | 40.0% | |
| TTTCCACCATGAGTAGATTC+AGG | + | chr4_3:45599350-45599369 | None:intergenic | 40.0% | |
| ! | GAATCTACTCATGGTGGAAA+TGG | - | chr4_3:45599350-45599369 | Msa0643120:intron | 40.0% |
| !!! | ACTTTTGTCCTTGCTGTTGT+TGG | + | chr4_3:45599527-45599546 | None:intergenic | 40.0% |
| ! | GCAAGGACAAAAGTATAAGG+AGG | - | chr4_3:45599533-45599552 | Msa0643120:intron | 40.0% |
| ! | GGACAAAAGTATAAGGAGGA+TGG | - | chr4_3:45599537-45599556 | Msa0643120:intron | 40.0% |
| ! | TCTTTTACTCGAGGAGTAGA+AGG | + | chr4_3:45599583-45599602 | None:intergenic | 40.0% |
| TCTACTCCTCGAGTAAAAGA+AGG | - | chr4_3:45599583-45599602 | Msa0643120:intron | 40.0% | |
| AGCTGTGTGTAGAATATGTC+TGG | - | chr4_3:45599777-45599796 | Msa0643120:intron | 40.0% | |
| CTGGTTGAATTATGTGAAGG+AGG | - | chr4_3:45599796-45599815 | Msa0643120:intron | 40.0% | |
| ACAGCTACATTCCAACTTGA+AGG | + | chr4_3:45599827-45599846 | None:intergenic | 40.0% | |
| ATGTGATGTCTGCAAAAAGG+AGG | - | chr4_3:45599915-45599934 | Msa0643120:intron | 40.0% | |
| ACCTTCCTGTCACTCTATTA+CGG | - | chr4_3:45599944-45599963 | Msa0643120:intron | 40.0% | |
| GCTCAGCTTGAAGATGTAAA+CGG | - | chr4_3:45600006-45600025 | Msa0643120:intron | 40.0% | |
| CTCAGCTTGAAGATGTAAAC+GGG | - | chr4_3:45600007-45600026 | Msa0643120:intron | 40.0% | |
| TTGAAGATGTAAACGGGTAC+AGG | - | chr4_3:45600013-45600032 | Msa0643120:intron | 40.0% | |
| GAACTTGAAGTCTGATCAGA+CGG | + | chr4_3:45600140-45600159 | None:intergenic | 40.0% | |
| ! | GTCTGATCAGACTTCAAGTT+CGG | - | chr4_3:45600139-45600158 | Msa0643120:intron | 40.0% |
| ATGCTAACAATGACAAGCAC+CGG | + | chr4_3:45600391-45600410 | None:intergenic | 40.0% | |
| GCTTGTCATTGTTAGCATGT+TGG | - | chr4_3:45600393-45600412 | Msa0643120:intron | 40.0% | |
| TAGGTGACAAAAATGGGAAC+TGG | - | chr4_3:45600585-45600604 | Msa0643120:intron | 40.0% | |
| TCCATGACATCATCAACCAT+GGG | - | chr4_3:45600657-45600676 | Msa0643120:intron | 40.0% | |
| ! | CGCGCATATATTTTACTCCT+TGG | - | chr4_3:45600998-45601017 | Msa0643120:intron | 40.0% |
| ATCCTTCTTGCAACATTTGC+TGG | - | chr4_3:45601219-45601238 | Msa0643120:three_prime_UTR | 40.0% | |
| AACCAGCAAATGTTGCAAGA+AGG | + | chr4_3:45601224-45601243 | None:intergenic | 40.0% | |
| !!! | CTTGCAACATTTGCTGGTTT+TGG | - | chr4_3:45601225-45601244 | Msa0643120:three_prime_UTR | 40.0% |
| !! | GGTTTTGGTGTAGTAATGAG+TGG | - | chr4_3:45601240-45601259 | Msa0643120:three_prime_UTR | 40.0% |
| TCTTTAGATGGAGAAGGAGA+TGG | - | chr4_3:45601283-45601302 | Msa0643120:intron | 40.0% | |
| GCTTCATTAGAGCAACAACA+TGG | - | chr4_3:45601309-45601328 | Msa0643120:intron | 40.0% | |
| GATGAGTGTTTGTGCTTCAT+AGG | - | chr4_3:45601765-45601784 | Msa0643120:intron | 40.0% | |
| !! | TTGTGCTTCATAGGTACTGA+TGG | - | chr4_3:45601774-45601793 | Msa0643120:intron | 40.0% |
| TTCAGCACATGAAAACCAGA+AGG | - | chr4_3:45601801-45601820 | Msa0643120:three_prime_UTR | 40.0% | |
| TCAGCACATGAAAACCAGAA+GGG | - | chr4_3:45601802-45601821 | Msa0643120:three_prime_UTR | 40.0% | |
| AAGAAAGCCAAAAACCCTTC+TGG | + | chr4_3:45601819-45601838 | None:intergenic | 40.0% | |
| !!! | GGCTTTCTTTTTTGTAGGCT+TGG | - | chr4_3:45601830-45601849 | Msa0643120:three_prime_UTR | 40.0% |
| TTAGGTCAAAGTGAGAGTGA+AGG | - | chr4_3:45601874-45601893 | Msa0643120:CDS | 40.0% | |
| TAGGTCAAAGTGAGAGTGAA+GGG | - | chr4_3:45601875-45601894 | Msa0643120:CDS | 40.0% | |
| AGCACTCCAAATTGAAGATG+TGG | + | chr4_3:45602029-45602048 | None:intergenic | 40.0% | |
| !! | TCAATTTGGAGTGCTGCTTA+TGG | - | chr4_3:45602034-45602053 | Msa0643120:CDS | 40.0% |
| TCCCATCGTGTAACTAAACA+AGG | + | chr4_3:45602206-45602225 | None:intergenic | 40.0% | |
| AAATCACGGCAAAAATGTGG+TGG | - | chr4_3:45602259-45602278 | Msa0643120:intron | 40.0% | |
| GTGTCACATAAGTTAGGCAA+TGG | + | chr4_3:45602385-45602404 | None:intergenic | 40.0% | |
| TTGAAGGGGAGCAGTTTATA+GGG | + | chr4_3:45602744-45602763 | None:intergenic | 40.0% | |
| TTTGAAGGGGAGCAGTTTAT+AGG | + | chr4_3:45602745-45602764 | None:intergenic | 40.0% | |
| TAAACTGCTCCCCTTCAAAA+TGG | - | chr4_3:45602746-45602765 | Msa0643120:intron | 40.0% | |
| !! | CCAATCCTTCCATTTTGAAG+GGG | + | chr4_3:45602758-45602777 | None:intergenic | 40.0% |
| AAAAATTATGGGGAGCAGAG+GGG | + | chr4_3:45603020-45603039 | None:intergenic | 40.0% | |
| CAAAAAATTATGGGGAGCAG+AGG | + | chr4_3:45603022-45603041 | None:intergenic | 40.0% | |
| !!! | GACCTTGCGTACTCTTTTTT+AGG | + | chr4_3:45604414-45604433 | None:intergenic | 40.0% |
| TCAACTGAGTTAAGCTTACG+AGG | + | chr4_3:45604436-45604455 | None:intergenic | 40.0% | |
| AAACTCGTACAAATGACGTG+TGG | - | chr4_3:45604587-45604606 | Msa0643120:intron | 40.0% | |
| AACTCGTACAAATGACGTGT+GGG | - | chr4_3:45604588-45604607 | Msa0643120:intron | 40.0% | |
| AGTAACTTCCAAGCACGTTT+CGG | + | chr4_3:45604687-45604706 | None:intergenic | 40.0% | |
| TGCTTGGAAGTTACTATCAG+AGG | - | chr4_3:45604692-45604711 | Msa0643120:intron | 40.0% | |
| AACGTATCGTCCATACAACA+AGG | - | chr4_3:45604828-45604847 | Msa0643120:intron | 40.0% | |
| TATCGTCCATACAACAAGGA+CGG | - | chr4_3:45604832-45604851 | Msa0643120:intron | 40.0% | |
| ! | TAGAAACCGTCCTTGTTGTA+TGG | + | chr4_3:45604841-45604860 | None:intergenic | 40.0% |
| GTCAACACTTCATTCTTACG+AGG | - | chr4_3:45604861-45604880 | Msa0643120:intron | 40.0% | |
| CACCTGAAATACTATGCCAT+TGG | + | chr4_3:45605132-45605151 | None:intergenic | 40.0% | |
| TCATCAGATTAGATGTGTCC+CGG | + | chr4_3:45605412-45605431 | None:intergenic | 40.0% | |
| GATGAGTGTTTGTGCTTCAT+AGG | - | chr4_3:45601765-45601784 | Msa0643120:intron | 40.0% | |
| !! | TTGTGCTTCATAGGTACTGA+TGG | - | chr4_3:45601774-45601793 | Msa0643120:intron | 40.0% |
| TTCAGCACATGAAAACCAGA+AGG | - | chr4_3:45601801-45601820 | Msa0643120:three_prime_UTR | 40.0% | |
| TCAGCACATGAAAACCAGAA+GGG | - | chr4_3:45601802-45601821 | Msa0643120:three_prime_UTR | 40.0% | |
| AAGAAAGCCAAAAACCCTTC+TGG | + | chr4_3:45601819-45601838 | None:intergenic | 40.0% | |
| !!! | GGCTTTCTTTTTTGTAGGCT+TGG | - | chr4_3:45601830-45601849 | Msa0643120:three_prime_UTR | 40.0% |
| TTAGGTCAAAGTGAGAGTGA+AGG | - | chr4_3:45601874-45601893 | Msa0643120:CDS | 40.0% | |
| TAGGTCAAAGTGAGAGTGAA+GGG | - | chr4_3:45601875-45601894 | Msa0643120:CDS | 40.0% | |
| !! | AGGATTGGTTTGAGTGTTGG+TGG | + | chr4_3:45598016-45598035 | None:intergenic | 45.0% |
| !! | ACTTTGCCGGTATCGATGAA+TGG | - | chr4_3:45598417-45598436 | Msa0643120:intron | 45.0% |
| !! | CTTTGCCGGTATCGATGAAT+GGG | - | chr4_3:45598418-45598437 | Msa0643120:intron | 45.0% |
| ! | TTACGAACAGAAGGCACACT+CGG | - | chr4_3:45598685-45598704 | Msa0643120:intron | 45.0% |
| AAACATCACATGTTCCTCCC+AGG | - | chr4_3:45598916-45598935 | Msa0643120:intron | 45.0% | |
| GCTCCGACAAATAATTCTCC+TGG | - | chr4_3:45599092-45599111 | Msa0643120:intron | 45.0% | |
| ! | GAGTTTCAGGTATAGGACAC+CGG | - | chr4_3:45599166-45599185 | Msa0643120:intron | 45.0% |
| GACACCGGCAGATATTGAAA+AGG | - | chr4_3:45599181-45599200 | Msa0643120:intron | 45.0% | |
| AAAGGCGAATACACCTACTC+GGG | - | chr4_3:45599199-45599218 | Msa0643120:intron | 45.0% | |
| AACCCTGAATCTACTCATGG+TGG | - | chr4_3:45599344-45599363 | Msa0643120:intron | 45.0% | |
| ! | CATGGTGGAAATGGAAGTGT+TGG | - | chr4_3:45599359-45599378 | Msa0643120:intron | 45.0% |
| TATACCAGTATCCTTTGGCG+AGG | + | chr4_3:45599629-45599648 | None:intergenic | 45.0% | |
| ! | CTGTAAAGGCGAACTTGCTT+TGG | - | chr4_3:45599843-45599862 | Msa0643120:intron | 45.0% |
| TCCGTAATAGAGTGACAGGA+AGG | + | chr4_3:45599948-45599967 | None:intergenic | 45.0% | |
| TGGATCCGTAATAGAGTGAC+AGG | + | chr4_3:45599952-45599971 | None:intergenic | 45.0% | |
| ! | GGATCCAGAGTGTTCGAAAT+CGG | - | chr4_3:45599965-45599984 | Msa0643120:intron | 45.0% |
| CATTCCGATTTCGAACACTC+TGG | + | chr4_3:45599972-45599991 | None:intergenic | 45.0% | |
| ! | CAGAGTGTTCGAAATCGGAA+TGG | - | chr4_3:45599970-45599989 | Msa0643120:intron | 45.0% |
| AGTGTTCGAAATCGGAATGG+TGG | - | chr4_3:45599973-45599992 | Msa0643120:intron | 45.0% | |
| CAGACCATCTGATCCAGATA+TGG | - | chr4_3:45600174-45600193 | Msa0643120:intron | 45.0% | |
| TCAGCCATATCTGGATCAGA+TGG | + | chr4_3:45600181-45600200 | None:intergenic | 45.0% | |
| TGCTTCGATTAGGAGCTTCA+TGG | - | chr4_3:45600292-45600311 | Msa0643120:intron | 45.0% | |
| TAGGGTTTGGCAAGAAGTTC+CGG | - | chr4_3:45600369-45600388 | Msa0643120:intron | 45.0% | |
| !! | CATGGTTGATGATGTCATGG+AGG | + | chr4_3:45600658-45600677 | None:intergenic | 45.0% |
| CTCCATGACATCATCAACCA+TGG | - | chr4_3:45600656-45600675 | Msa0643120:intron | 45.0% | |
| !! | ACCCATGGTTGATGATGTCA+TGG | + | chr4_3:45600661-45600680 | None:intergenic | 45.0% |
| TGACATCATCAACCATGGGT+AGG | - | chr4_3:45600661-45600680 | Msa0643120:intron | 45.0% | |
| ATGTGTTGCAAACCTACCCA+TGG | + | chr4_3:45600676-45600695 | None:intergenic | 45.0% | |
| ATGGGTAGGTTTGCAACACA+TGG | - | chr4_3:45600675-45600694 | Msa0643120:intron | 45.0% | |
| ATTTGTGTCCAGTGATGAGC+AGG | - | chr4_3:45600928-45600947 | Msa0643120:intron | 45.0% | |
| CATATGAACCTGCTCATCAC+TGG | + | chr4_3:45600939-45600958 | None:intergenic | 45.0% | |
| CAGTGATGAGCAGGTTCATA+TGG | - | chr4_3:45600937-45600956 | Msa0643120:intron | 45.0% | |
| ! | ATCCTTCCAGTTTGCTCTAG+TGG | - | chr4_3:45600968-45600987 | Msa0643120:intron | 45.0% |
| AACCACTAGAGCAAACTGGA+AGG | + | chr4_3:45600973-45600992 | None:intergenic | 45.0% | |
| AGAGAACCACTAGAGCAAAC+TGG | + | chr4_3:45600977-45600996 | None:intergenic | 45.0% | |
| CTCATAGAAAGCGGTTACCA+AGG | + | chr4_3:45601018-45601037 | None:intergenic | 45.0% | |
| TGTTGTCCTGCTTGTGTCAT+CGG | + | chr4_3:45601342-45601361 | None:intergenic | 45.0% | |
| ATGAAGCACGGATACAGACA+CGG | - | chr4_3:45601616-45601635 | Msa0643120:intron | 45.0% | |
| ! | TCATCGGATTAGATGTGTCC+CGG | + | chr4_3:45601750-45601769 | None:intergenic | 45.0% |
| AAAGTGAGAGTGAAGGGTTG+AGG | - | chr4_3:45601881-45601900 | Msa0643120:CDS | 45.0% | |
| !! | ATTTGGAGTGCTGCTTATGG+AGG | - | chr4_3:45602037-45602056 | Msa0643120:CDS | 45.0% |
| ACAAGACATGCTTACAGCAG+TGG | + | chr4_3:45602653-45602672 | None:intergenic | 45.0% | |
| CCCCTTCAAAATGGAAGGAT+TGG | - | chr4_3:45602755-45602774 | Msa0643120:intron | 45.0% | |
| TATAATTAGGGTGGAGCAGC+AGG | - | chr4_3:45602991-45603010 | Msa0643120:intron | 45.0% | |
| GGTTCAACAGTGGGATAGAA+AGG | + | chr4_3:45603078-45603097 | None:intergenic | 45.0% | |
| ! | CGCCTAAAAAAGAGTACGCA+AGG | - | chr4_3:45604409-45604428 | Msa0643120:intron | 45.0% |
| ! | AAGGTTTGGAGTTCGAATCC+CGG | - | chr4_3:45604479-45604498 | Msa0643120:intron | 45.0% |
| GGAGAAAAAGAGACTGACAG+TGG | + | chr4_3:45604905-45604924 | None:intergenic | 45.0% | |
| AAAGTGAGAGTGAAGGGTTG+AGG | - | chr4_3:45601881-45601900 | Msa0643120:CDS | 45.0% | |
| !! | TAAATAATTTAAAAGATTTA+TGG | + | chr4_3:45603226-45603245 | None:intergenic | 5.0% |
| !! | ATTATTTAATTGTAATAAAT+TGG | - | chr4_3:45603238-45603257 | Msa0643120:intron | 5.0% |
| !! | GGAGTAGGACTTGGTGTCAT+TGG | + | chr4_3:45599020-45599039 | None:intergenic | 50.0% |
| GTAGGAGTTGGAGTAGGACT+TGG | + | chr4_3:45599029-45599048 | None:intergenic | 50.0% | |
| TTGGGAGTAGGAGTTGGAGT+AGG | + | chr4_3:45599035-45599054 | None:intergenic | 50.0% | |
| ACTCTCTTGGGAGTAGGAGT+TGG | + | chr4_3:45599041-45599060 | None:intergenic | 50.0% | |
| !!! | CCTTTTGGTGTTGCAGATCC+AGG | + | chr4_3:45599113-45599132 | None:intergenic | 50.0% |
| CCTGGATCTGCAACACCAAA+AGG | - | chr4_3:45599110-45599129 | Msa0643120:intron | 50.0% | |
| GAAGAGGAAACTTCCCGAGT+AGG | + | chr4_3:45599215-45599234 | None:intergenic | 50.0% | |
| ! | CTTTTCTCGAGTGCTCGAAG+AGG | + | chr4_3:45599231-45599250 | None:intergenic | 50.0% |
| !! | GGTGGAAATGGAAGTGTTGG+CGG | - | chr4_3:45599362-45599381 | Msa0643120:intron | 50.0% |
| AATGCCTGCCAACAACAGCA+AGG | - | chr4_3:45599516-45599535 | Msa0643120:intron | 50.0% | |
| !! | TTGTCCTTGCTGTTGTTGGC+AGG | + | chr4_3:45599523-45599542 | None:intergenic | 50.0% |
| AGGAGGTGAGACCTTCAAGT+TGG | - | chr4_3:45599813-45599832 | Msa0643120:intron | 50.0% | |
| TGCACACAGTCAGCCATATC+TGG | + | chr4_3:45600190-45600209 | None:intergenic | 50.0% | |
| TAGATGGAGAAGGAGATGGC+AGG | - | chr4_3:45601287-45601306 | Msa0643120:intron | 50.0% | |
| CTGCTTGTGTCATCGGTAGA+GGG | + | chr4_3:45601335-45601354 | None:intergenic | 50.0% | |
| ACGGATACAGACACGGACAT+TGG | - | chr4_3:45601623-45601642 | Msa0643120:intron | 50.0% | |
| GATTAGATGTGTCCCGGTGT+CGG | + | chr4_3:45601744-45601763 | None:intergenic | 50.0% | |
| TTGGAAGATAGGAGGGGGAA+AGG | - | chr4_3:45602704-45602723 | Msa0643120:intron | 50.0% | |
| TGGAAGATAGGAGGGGGAAA+GGG | - | chr4_3:45602705-45602724 | Msa0643120:intron | 50.0% | |
| CTGCTCCCCTTCAAAATGGA+AGG | - | chr4_3:45602750-45602769 | Msa0643120:intron | 50.0% | |
| GATTAGATGTGTCCCGGTGT+CGG | + | chr4_3:45601744-45601763 | None:intergenic | 50.0% | |
| GTTGAACACGTCCTCGCCAA+AGG | - | chr4_3:45599615-45599634 | Msa0643120:intron | 55.0% | |
| ACGTCCTCGCCAAAGGATAC+TGG | - | chr4_3:45599622-45599641 | Msa0643120:intron | 55.0% | |
| ATGGCTGACTGTGTGCAGTC+AGG | - | chr4_3:45600193-45600212 | Msa0643120:intron | 55.0% | |
| CCTGCTTGTGTCATCGGTAG+AGG | + | chr4_3:45601336-45601355 | None:intergenic | 55.0% | |
| CCTCTACCGATGACACAAGC+AGG | - | chr4_3:45601333-45601352 | Msa0643120:intron | 55.0% | |
| AAGATAGGAGGGGGAAAGGG+AGG | - | chr4_3:45602708-45602727 | Msa0643120:intron | 55.0% | |
| AGATAGGAGGGGGAAAGGGA+GGG | - | chr4_3:45602709-45602728 | Msa0643120:intron | 55.0% | |
| TGCACGCAGTCAGCGACATC+TGG | - | chr4_3:45600113-45600132 | Msa0643120:intron | 60.0% | |
| AACTGCAACCACGCCGCGTT+CGG | - | chr4_3:45601368-45601387 | Msa0643120:intron | 60.0% | |
| !! | TGGTTGGATTGGCCCGAACG+CGG | + | chr4_3:45601384-45601403 | None:intergenic | 60.0% |
| ACGTGACACGTGTCCGACAC+CGG | - | chr4_3:45601728-45601747 | Msa0643120:intron | 60.0% | |
| GATAGGAGGGGGAAAGGGAG+GGG | - | chr4_3:45602710-45602729 | Msa0643120:intron | 60.0% | |
| ACGTGACACGTGTCCGACAC+CGG | - | chr4_3:45601728-45601747 | Msa0643120:intron | 60.0% | |
| ACTGCAACCACGCCGCGTTC+GGG | - | chr4_3:45601369-45601388 | Msa0643120:intron | 65.0% | |
| CGTGACACGTGTCCGACACC+GGG | - | chr4_3:45601729-45601748 | Msa0643120:intron | 65.0% | |
| CGTGACACGTGTCCGACACC+GGG | - | chr4_3:45601729-45601748 | Msa0643120:intron | 65.0% | |
| !! | GGATTGGCCCGAACGCGGCG+TGG | + | chr4_3:45601379-45601398 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 45597609 | 45605693 | 45597609 | ID=Msa0643120;Name=Msa0643120 |
| chr4_3 | mRNA | 45597609 | 45605693 | 45597609 | ID=Msa0643120-mRNA-1;Parent=Msa0643120;Name=Msa0643120-mRNA-1;_AED=0.19;_eAED=0.19;_QI=162|0.88|0.8|1|0.44|0.5|10|227|542 |
| chr4_3 | exon | 45597609 | 45597657 | 45597609 | ID=Msa0643120-mRNA-1:exon:10615;Parent=Msa0643120-mRNA-1 |
| chr4_3 | exon | 45601174 | 45601292 | 45601174 | ID=Msa0643120-mRNA-1:exon:10614;Parent=Msa0643120-mRNA-1 |
| chr4_3 | exon | 45601794 | 45602107 | 45601794 | ID=Msa0643120-mRNA-1:exon:10613;Parent=Msa0643120-mRNA-1 |
| chr4_3 | exon | 45602283 | 45602362 | 45602283 | ID=Msa0643120-mRNA-1:exon:10612;Parent=Msa0643120-mRNA-1 |
| chr4_3 | exon | 45602624 | 45602714 | 45602624 | ID=Msa0643120-mRNA-1:exon:10611;Parent=Msa0643120-mRNA-1 |
| chr4_3 | exon | 45602858 | 45602998 | 45602858 | ID=Msa0643120-mRNA-1:exon:10610;Parent=Msa0643120-mRNA-1 |
| chr4_3 | exon | 45603282 | 45603568 | 45603282 | ID=Msa0643120-mRNA-1:exon:10609;Parent=Msa0643120-mRNA-1 |
| chr4_3 | exon | 45603659 | 45603824 | 45603659 | ID=Msa0643120-mRNA-1:exon:10608;Parent=Msa0643120-mRNA-1 |
| chr4_3 | exon | 45603908 | 45604417 | 45603908 | ID=Msa0643120-mRNA-1:exon:10607;Parent=Msa0643120-mRNA-1 |
| chr4_3 | exon | 45605433 | 45605693 | 45605433 | ID=Msa0643120-mRNA-1:exon:10606;Parent=Msa0643120-mRNA-1 |
| chr4_3 | five_prime_UTR | 45605532 | 45605693 | 45605532 | ID=Msa0643120-mRNA-1:five_prime_utr;Parent=Msa0643120-mRNA-1 |
| chr4_3 | CDS | 45605433 | 45605531 | 45605433 | ID=Msa0643120-mRNA-1:cds;Parent=Msa0643120-mRNA-1 |
| chr4_3 | CDS | 45603908 | 45604417 | 45603908 | ID=Msa0643120-mRNA-1:cds;Parent=Msa0643120-mRNA-1 |
| chr4_3 | CDS | 45603659 | 45603824 | 45603659 | ID=Msa0643120-mRNA-1:cds;Parent=Msa0643120-mRNA-1 |
| chr4_3 | CDS | 45603282 | 45603568 | 45603282 | ID=Msa0643120-mRNA-1:cds;Parent=Msa0643120-mRNA-1 |
| chr4_3 | CDS | 45602858 | 45602998 | 45602858 | ID=Msa0643120-mRNA-1:cds;Parent=Msa0643120-mRNA-1 |
| chr4_3 | CDS | 45602624 | 45602714 | 45602624 | ID=Msa0643120-mRNA-1:cds;Parent=Msa0643120-mRNA-1 |
| chr4_3 | CDS | 45602283 | 45602362 | 45602283 | ID=Msa0643120-mRNA-1:cds;Parent=Msa0643120-mRNA-1 |
| chr4_3 | CDS | 45601853 | 45602107 | 45601853 | ID=Msa0643120-mRNA-1:cds;Parent=Msa0643120-mRNA-1 |
| chr4_3 | three_prime_UTR | 45601794 | 45601852 | 45601794 | ID=Msa0643120-mRNA-1:three_prime_utr;Parent=Msa0643120-mRNA-1 |
| chr4_3 | three_prime_UTR | 45601174 | 45601292 | 45601174 | ID=Msa0643120-mRNA-1:three_prime_utr;Parent=Msa0643120-mRNA-1 |
| chr4_3 | three_prime_UTR | 45597609 | 45597657 | 45597609 | ID=Msa0643120-mRNA-1:three_prime_utr;Parent=Msa0643120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
